F269101

General Info

Members Datasets Scaffolds Average Seq Length
176 127 352 279

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_217188_c1|nmdc:mga05p37_217188_c1_365_1297
Length 310
Sequence MSMRSSTVLATDGAKSAAAXXDAPEARPGAPPACNAGERNLVLEPGRADRHYWADLWHYRELFAILAWRDVAVRYKQTVIGVAWAVVRPLLTMVVFTIVFGKLAGLPSDGAVPYPVLVFAGMLPWFLFSSILSEASGSLIGNANLIGKVYFPRLIIPTSSAVVALVDFAINLALLFAIMAWYGVVPGWQIVLLPAFVALAVLASLGPALFLTALNVKYRDFRYIIPFVVQVGLYVSPVGFSSAVVPEAWRFWYSLNPVVGVIDGFRWCLLGGESRLYMPGFLLSLGVVALFLWLGVAYFRRTERSFADLM

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
70 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
71 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
90 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
95 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
96 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
97 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
101 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
105 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
106 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
107 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
112 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
113 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
114 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
115 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
116 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
119 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
120 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
121 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
122 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
123 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
124 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
127 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.3
Metatranscriptomes 1.14
Isolates 0.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.39
Nodule 0
Rhizoplane 0.57
Rhizosphere 88.07
Stem 0
Stem Tuber 0
Unclassified 6.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_217188_c1 3300050507 Bacteria 2309
2 rootH2_10028377 3300003320 Bacteria 43972
3 rootH1_10097768 3300003323 Unclassified 1872
4 Ga0065704_10076574 3300005289 Bacteria 5073
5 Ga0070670_100144584 3300005331 Bacteria 2057
6 Ga0068868_100313472 3300005338 Unclassified 1335
7 Ga0070689_100346929 3300005340 Bacteria 1244
8 Ga0070668_100022916 3300005347 Bacteria 4721
9 Ga0070668_100042659 3300005347 Bacteria 3477
10 Ga0070671_100075820 3300005355 Bacteria 2810
11 Ga0070713_100046457 3300005436 Bacteria 3563
12 Ga0070713_100220012 3300005436 Unclassified 1722
13 Ga0070708_100000461 3300005445 Bacteria 30610
14 Ga0070685_10004623 3300005466 Bacteria 6967
15 Ga0070707_100011615 3300005468 Bacteria 8218
16 Ga0070698_100328151 3300005471 Bacteria 1461
17 Ga0070684_100208499 3300005535 Bacteria 1781
18 Ga0070695_100147562 3300005545 Bacteria 1638
19 Ga0070693_100126654 3300005547 Bacteria 1591
20 Ga0068855_100001128 3300005563 Bacteria 33174
21 Ga0068852_100801451 3300005616 Bacteria 956
22 Ga0068864_100189174 3300005618 Bacteria 1886
23 Ga0068861_100013179 3300005719 Bacteria 5783
24 Ga0081455_10032580 3300005937 Bacteria 4694
25 Ga0075364_10303686 3300006051 Bacteria 1086
26 Ga0070712_100312594 3300006175 Bacteria 1275
27 Ga0070712_100321093 3300006175 Unclassified 1259
28 Ga0075367_10182411 3300006178 Bacteria 1309
29 Ga0075366_10012073 3300006195 Bacteria 4892
30 Ga0075428_100002147 3300006844 Bacteria 21300
31 Ga0075428_100033622 3300006844 Bacteria 5660
32 Ga0075428_100080545 3300006844 Bacteria 3554
33 Ga0075431_100124026 3300006847 Bacteria 2665
34 Ga0075431_100210378 3300006847 Bacteria 1987
35 Ga0075433_10397667 3300006852 Unclassified 1216
36 Ga0075434_100229134 3300006871 Bacteria 1877
37 Ga0075434_100236852 3300006871 Bacteria 1845
38 Ga0075434_100559555 3300006871 Bacteria 1163
39 Ga0075429_100347254 3300006880 Bacteria 1299
40 Ga0105240_10001405 3300009093 Bacteria 41308
41 Ga0105240_10014490 3300009093 Bacteria 10765
42 Ga0105240_10152268 3300009093 Bacteria 2753
43 Ga0111539_10000022 3300009094 Bacteria 240838
44 Ga0111539_10232155 3300009094 Bacteria 2148
45 Ga0111539_10761911 3300009094 Bacteria 1127
46 Ga0105245_10492128 3300009098 Bacteria 1241
47 Ga0114129_10094390 3300009147 Bacteria 4143
48 Ga0114129_10248476 3300009147 Bacteria 2389
49 Ga0114129_10640057 3300009147 Bacteria 1373
50 Ga0105243_10130583 3300009148 Bacteria 2130
51 Ga0105237_10170820 3300009545 Bacteria 2174
52 Ga0105238_10078690 3300009551 Bacteria 3287
53 Ga0105246_10065468 3300011119 Bacteria 2541
54 Ga0157374_10092144 3300013296 Bacteria 2891
55 Ga0157378_10391722 3300013297 Bacteria 1367
56 Ga0163162_10148331 3300013306 Bacteria 2462
57 Ga0163162_10440376 3300013306 Bacteria 1435
58 Ga0157372_10000897 3300013307 Bacteria 32327
59 Ga0163163_10001657 3300014325 Bacteria 18767
60 Ga0163163_10085377 3300014325 Bacteria 3165
61 Ga0157380_10101264 3300014326 Bacteria 2400
62 Ga0157380_10494383 3300014326 Bacteria 1186
63 Ga0206351_10631897 3300020077 Unclassified 968
64 Ga0206350_10285198 3300020080 Bacteria 2335
65 Ga0213872_10004080 3300021361 Bacteria 7862
66 Ga0213872_10055313 3300021361 Bacteria 1799
67 Ga0207695_10004846 3300025913 Bacteria 18164
68 Ga0207646_10083898 3300025922 Bacteria 2850
69 Ga0207694_10081850 3300025924 Bacteria 2537
70 Ga0207650_10144110 3300025925 Bacteria 1875
71 Ga0207700_10144338 3300025928 Unclassified 1960
72 Ga0207700_10360417 3300025928 Bacteria 1268
73 Ga0207664_10258204 3300025929 Bacteria 1523
74 Ga0207706_10078196 3300025933 Bacteria 2910
75 Ga0207709_10095847 3300025935 Bacteria 1950
76 Ga0207709_10123307 3300025935 Bacteria 1753
77 Ga0207689_10085301 3300025942 Bacteria 2596
78 Ga0207661_10003063 3300025944 Bacteria 11577
79 Ga0207661_10479156 3300025944 Bacteria 1136
80 Ga0207667_10003756 3300025949 Bacteria 18704
81 Ga0207668_10047085 3300025972 Bacteria 2951
82 Ga0207676_10199535 3300026095 Bacteria 1767
83 Ga0207675_100009748 3300026118 Bacteria 8993
84 Ga0207675_100230517 3300026118 Bacteria 1787
85 Ga0207428_10000030 3300027907 Bacteria 240846
86 Ga0265355_1001629 3300028036 Bacteria 1487
87 Ga0268266_10007627 3300028379 Bacteria 9733
88 Ga0268266_10088840 3300028379 Bacteria 2705
89 Ga0268266_10291760 3300028379 Bacteria 1519
90 Ga0268264_10113462 3300028381 Bacteria 2377
91 Ga0265337_1052909 3300028556 Unclassified 1139
92 Ga0265319_1000008 3300028563 Bacteria 215029
93 Ga0265334_10000425 3300028573 Bacteria 22182
94 Ga0265334_10035268 3300028573 Bacteria 1981
95 Ga0265318_10000023 3300028577 Bacteria 160826
96 Ga0265318_10005304 3300028577 Bacteria 6061
97 Ga0265323_10071461 3300028653 Unclassified 1185
98 Ga0265338_10010035 3300028800 Bacteria 11192
99 Ga0265338_10026057 3300028800 Bacteria 5911
100 Ga0265324_10023913 3300029957 Unclassified 2173
101 Ga0265330_10005771 3300031235 Bacteria 6143
102 Ga0265320_10003511 3300031240 Bacteria 10505
103 Ga0265320_10009369 3300031240 Bacteria 5911
104 Ga0265327_10000023 3300031251 Bacteria 382703
105 Ga0265316_10023618 3300031344 Bacteria 5162
106 Ga0265316_10104128 3300031344 Unclassified 2154
107 Ga0307509_10252241 3300031507 Bacteria 1547
108 Ga0265313_10003413 3300031595 Bacteria 12870
109 Ga0307508_10002524 3300031616 Bacteria 19290
110 Ga0265314_10000055 3300031711 Bacteria 172478
111 Ga0265314_10001345 3300031711 Bacteria 27781
112 Ga0265342_10097052 3300031712 Bacteria 1683
113 Ga0395898_0194430 3300037466 Bacteria 1938
114 Ga0436361_0473092 3300039447 Bacteria 3009
115 Ga0439449_0050426 3300042007 Bacteria 1540
116 Ga0451577_0000024 3300042876 Bacteria 411758
117 Ga0451577_0000435 3300042876 Bacteria 74303
118 Ga0451577_0000595 3300042876 Bacteria 58048
119 Ga0453684_0000327 3300044712 Bacteria 200341
120 Ga0453684_0012635 3300044712 Bacteria 13881
121 Ga0453684_0018002 3300044712 Bacteria 10879
122 Ga0453684_0029791 3300044712 Bacteria 7734
123 Ga0453684_0399670 3300044712 Bacteria 1539
124 Ga0495638_0049688 3300046460 Bacteria 2621
125 Ga0495638_0205956 3300046460 Bacteria 1108
126 Ga0495584_0065829 3300046491 Bacteria 1823
127 Ga0495594_0082629 3300046499 Bacteria 1795
128 Ga0495667_0153551 3300046559 Bacteria 1482
129 Ga0495668_0163904 3300046616 Bacteria 1218
130 Ga0495634_0243720 3300046642 Bacteria 1102
131 Ga0495646_0246326 3300046680 Bacteria 959
132 Ga0495649_0078457 3300046694 Bacteria 1767
133 Ga0495604_0405106 3300047317 Bacteria 898
134 Ga0495672_0006136 3300047320 Bacteria 9376
135 Ga0495684_0278432 3300047471 Bacteria 1208
136 Ga0496104_0201356 3300048907 Bacteria 1903
137 Ga0496126_0003042 3300048929 Bacteria 21731
138 Ga0496126_0279171 3300048929 Bacteria 1384
139 Ga0501034_0012801 3300049571 Bacteria 8654
140 Ga0501041_0104981 3300049577 Bacteria 1751
141 Ga0501041_0106244 3300049577 Bacteria 1740
142 Ga0501048_0000976 3300049582 Bacteria 21182
143 Ga0501048_0350020 3300049582 Bacteria 1054
144 Ga0501073_0009687 3300049589 Bacteria 7102
145 Ga0501079_0409985 3300049741 Bacteria 1063
146 Ga0501045_0348824 3300049824 Unclassified 1102
147 nmdc:mga0k408_78_c1 3300050493 Bacteria 45819
148 nmdc:mga05p37_297256_c1 3300050507 Bacteria 1920
149 nmdc:mga05p37_51841_c2 3300050507 Bacteria 3354
150 nmdc:mga09592_154779_c1 3300050508 Bacteria 1979
151 nmdc:mga09592_357782_c1 3300050508 Bacteria 1263
152 nmdc:mga0qj67_72219_c1 3300050509 Bacteria 1482
153 nmdc:mga06r32_156920_c1 3300050510 Bacteria 2257
154 nmdc:mga06r32_247831_c1 3300050510 Bacteria 1769
155 nmdc:mga08y16_24_c1 3300050511 Bacteria 240846
156 nmdc:mga08y16_599918_c1 3300050511 Bacteria 1110
157 nmdc:mga0n895_220625_c1 3300050512 Bacteria 1925
158 nmdc:mga0n895_467111_c1 3300050512 Bacteria 1273
159 nmdc:mga0rr50_208537_c1 3300050513 Bacteria 1609
160 nmdc:mga0a205_185633_c1 3300050515 Bacteria 1972
161 Ga0495601_0003991 3300053077 Bacteria 8493
162 Ga0495601_0005640 3300053077 Bacteria 7299
163 Ga0495601_0072538 3300053077 Bacteria 2199
164 Ga0495595_0129940 3300053084 Bacteria 1231
165 Ga0495619_0014253 3300053085 Bacteria 5022
166 Ga0500644_0149172 3300053088 Bacteria 936
167 Ga0500583_0000077 3300053092 Bacteria 58479
168 Ga0500641_0002099 3300053096 Bacteria 7067
169 Ga0500641_0007881 3300053096 Bacteria 3797
170 Ga0500594_0043275 3300053118 Bacteria 1241
171 Ga0500595_010079 3300053119 Bacteria 3773
172 Ga0500588_0047354 3300053146 Bacteria 1325
173 Ga0500604_0000862 3300053151 Bacteria 8391
174 Ga0500616_0001933 3300053153 Bacteria 18491
175 Ga0501082_0208356 3300060353 Bacteria 1701
176 2989396679 2989392574 Bacteria 4554005
177 nmdc:mga05p37_217188_c1
178 rootH2_10028377
179 rootH1_10097768
180 Ga0065704_10076574
181 Ga0070670_100144584
182 Ga0068868_100313472
183 Ga0070689_100346929
184 Ga0070668_100022916
185 Ga0070668_100042659
186 Ga0070671_100075820
187 Ga0070713_100046457
188 Ga0070713_100220012
189 Ga0070708_100000461
190 Ga0070685_10004623
191 Ga0070707_100011615
192 Ga0070698_100328151
193 Ga0070684_100208499
194 Ga0070695_100147562
195 Ga0070693_100126654
196 Ga0068855_100001128
197 Ga0068852_100801451
198 Ga0068864_100189174
199 Ga0068861_100013179
200 Ga0081455_10032580
201 Ga0075364_10303686
202 Ga0070712_100312594
203 Ga0070712_100321093
204 Ga0075367_10182411
205 Ga0075366_10012073
206 Ga0075428_100002147
207 Ga0075428_100033622
208 Ga0075428_100080545
209 Ga0075431_100124026
210 Ga0075431_100210378
211 Ga0075433_10397667
212 Ga0075434_100229134
213 Ga0075434_100236852
214 Ga0075434_100559555
215 Ga0075429_100347254
216 Ga0105240_10001405
217 Ga0105240_10014490
218 Ga0105240_10152268
219 Ga0111539_10000022
220 Ga0111539_10232155
221 Ga0111539_10761911
222 Ga0105245_10492128
223 Ga0114129_10094390
224 Ga0114129_10248476
225 Ga0114129_10640057
226 Ga0105243_10130583
227 Ga0105237_10170820
228 Ga0105238_10078690
229 Ga0105246_10065468
230 Ga0157374_10092144
231 Ga0157378_10391722
232 Ga0163162_10148331
233 Ga0163162_10440376
234 Ga0157372_10000897
235 Ga0163163_10001657
236 Ga0163163_10085377
237 Ga0157380_10101264
238 Ga0157380_10494383
239 Ga0206351_10631897
240 Ga0206350_10285198
241 Ga0213872_10004080
242 Ga0213872_10055313
243 Ga0207695_10004846
244 Ga0207646_10083898
245 Ga0207694_10081850
246 Ga0207650_10144110
247 Ga0207700_10144338
248 Ga0207700_10360417
249 Ga0207664_10258204
250 Ga0207706_10078196
251 Ga0207709_10095847
252 Ga0207709_10123307
253 Ga0207689_10085301
254 Ga0207661_10003063
255 Ga0207661_10479156
256 Ga0207667_10003756
257 Ga0207668_10047085
258 Ga0207676_10199535
259 Ga0207675_100009748
260 Ga0207675_100230517
261 Ga0207428_10000030
262 Ga0265355_1001629
263 Ga0268266_10007627
264 Ga0268266_10088840
265 Ga0268266_10291760
266 Ga0268264_10113462
267 Ga0265337_1052909
268 Ga0265319_1000008
269 Ga0265334_10000425
270 Ga0265334_10035268
271 Ga0265318_10000023
272 Ga0265318_10005304
273 Ga0265323_10071461
274 Ga0265338_10010035
275 Ga0265338_10026057
276 Ga0265324_10023913
277 Ga0265330_10005771
278 Ga0265320_10003511
279 Ga0265320_10009369
280 Ga0265327_10000023
281 Ga0265316_10023618
282 Ga0265316_10104128
283 Ga0307509_10252241
284 Ga0265313_10003413
285 Ga0307508_10002524
286 Ga0265314_10000055
287 Ga0265314_10001345
288 Ga0265342_10097052
289 Ga0395898_0194430
290 Ga0436361_0473092
291 Ga0439449_0050426
292 Ga0451577_0000024
293 Ga0451577_0000435
294 Ga0451577_0000595
295 Ga0453684_0000327
296 Ga0453684_0012635
297 Ga0453684_0018002
298 Ga0453684_0029791
299 Ga0453684_0399670
300 Ga0495638_0049688
301 Ga0495638_0205956
302 Ga0495584_0065829
303 Ga0495594_0082629
304 Ga0495667_0153551
305 Ga0495668_0163904
306 Ga0495634_0243720
307 Ga0495646_0246326
308 Ga0495649_0078457
309 Ga0495604_0405106
310 Ga0495672_0006136
311 Ga0495684_0278432
312 Ga0496104_0201356
313 Ga0496126_0003042
314 Ga0496126_0279171
315 Ga0501034_0012801
316 Ga0501041_0104981
317 Ga0501041_0106244
318 Ga0501048_0000976
319 Ga0501048_0350020
320 Ga0501073_0009687
321 Ga0501079_0409985
322 Ga0501045_0348824
323 nmdc:mga0k408_78_c1
324 nmdc:mga05p37_297256_c1
325 nmdc:mga05p37_51841_c2
326 nmdc:mga09592_154779_c1
327 nmdc:mga09592_357782_c1
328 nmdc:mga0qj67_72219_c1
329 nmdc:mga06r32_156920_c1
330 nmdc:mga06r32_247831_c1
331 nmdc:mga08y16_24_c1
332 nmdc:mga08y16_599918_c1
333 nmdc:mga0n895_220625_c1
334 nmdc:mga0n895_467111_c1
335 nmdc:mga0rr50_208537_c1
336 nmdc:mga0a205_185633_c1
337 Ga0495601_0003991
338 Ga0495601_0005640
339 Ga0495601_0072538
340 Ga0495595_0129940
341 Ga0495619_0014253
342 Ga0500644_0149172
343 Ga0500583_0000077
344 Ga0500641_0002099
345 Ga0500641_0007881
346 Ga0500594_0043275
347 Ga0500595_010079
348 Ga0500588_0047354
349 Ga0500604_0000862
350 Ga0500616_0001933
351 Ga0501082_0208356
352 2989396679

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

61

270

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7k2t-assembly1.cif.gz_B mg2+/atp-bound structure of the full-length wzmwzt o antigen abc transporter in lipid nanodiscs 0.8839 29 276
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.8768 29 276
6m96-assembly1.cif.gz_B-2 atp-bound conformation of the wzmwzt o antigen abc transporter 0.8744 29 276
7k2t-assembly1.cif.gz_B mg2+/atp-bound structure of the full-length wzmwzt o antigen abc transporter in lipid nanodiscs 0.8739 29 276
8dku-assembly1.cif.gz_B cryoem structure of the a. aeolicus wzmwzt transporter bound to the native o antigen 0.8513 29 276
ID Description Score Start End Superfamily
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6928 64 264 3.40.1710.10
af_Q9VMM9_322_706_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6467 74 267 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.6402 55 264 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5231 64 264 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5084 55 264 3.40.1710.10
ID Description Score Start End GO Terms
AF-B1ZW38-F1-model_v4 Transport permease protein 0.9814 8 276 GO:0005886
GO:0015920
GO:0140359
AF-A0A290QEQ1-F1-model_v4 Transport permease protein 0.9782 1 276 GO:0005886
GO:0015920
GO:0140359
AF-A0A2S7SUZ0-F1-model_v4 Transport permease protein 0.9763 20 276 GO:0005886
GO:0015920
GO:0140359
AF-A0A290QEQ1-F1-model_v4 Transport permease protein 0.9748 1 276 GO:0005886
GO:0015920
GO:0140359
AF-A0A532ED10-F1-model_v4 Transport permease protein 0.9738 21 276 GO:0005886
GO:0015920
GO:0140359

Map