F268593

General Info

Members Datasets Scaffolds Average Seq Length
176 112 352 494

Family's Representative Sequence

Representative Sequence 3300033179|Ga0307507_10085919|Ga0307507_100859191
Length 522
Sequence MSAHALRYVFPAMTNAKAETAITPTRADNYADWYLEVIKAADLAENSTVKGCMVIKPWGYALWEHVQRVLDGMFKATGHVNAYFPLFIPVSLLEKEAAHVEGFAKECAVVTHHRLELRNGKLVPAGELEEPLVVRPTSETIIGESFAKWVQSYRDLPLLINQWANVVRWEMRTRMFLRTTEFLWQEGHTAHATEQEAVAETMQMLGVYATLAEQWMAIPVIQGEKTESERFPGAVKTYCIEAMMQDHKALQAGTSHFLGQNFAKASGIQFQDEKGALGHAWTTSWGFSTRMIGAMIMTHGDDDGMVCPPRLAPQQIVIIPVIQKPEVRDQVLAWCTELKRELEGQTFVGTPLRVHLDARDIQGSKKVWEWIKKGVPIRLEIGPKDIEKGAVFLGRRDKKPKDKQSVARGEFVAKAAAMLQDIQDALYQRALAFRTEHTRTIDSKDEFYAWFTAPATKDPNDPTPIHGGFAMTHFNGDPRLEAQIKDDLSVTVRCIPLAPGESGTCPFTGQPSAKRVVWGKSY

Samples

Sample ID Description Type Environment
1 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
66 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
83 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
84 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
98 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
99 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
100 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
101 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
102 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
103 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
104 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
105 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
106 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
107 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
108 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
109 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
110 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
111 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
112 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.3
Metatranscriptomes 0
Isolates 1.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.68
Nodule 0
Rhizoplane 0.57
Rhizosphere 88.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307507_10085919 3300033179 Bacteria 2733
2 LJQas_1000249 3300000549 Bacteria 9931
3 Ga0065165_1000145 3300005262 Bacteria 123255
4 Ga0065704_10100995 3300005289 Bacteria 2254
5 Ga0065704_10102957 3300005289 Bacteria 2187
6 Ga0065707_10082675 3300005295 Bacteria 12845
7 Ga0070658_10002477 3300005327 Bacteria 15435
8 Ga0070658_10171220 3300005327 Bacteria 1824
9 Ga0070690_100005163 3300005330 Bacteria 7309
10 Ga0070670_100017663 3300005331 Bacteria 6121
11 Ga0070677_10005365 3300005333 Bacteria 4220
12 Ga0070689_100033748 3300005340 Bacteria 3901
13 Ga0070689_100052025 3300005340 Bacteria 3167
14 Ga0070661_100033589 3300005344 Bacteria 3716
15 Ga0070675_100108313 3300005354 Bacteria 2346
16 Ga0070671_100048814 3300005355 Bacteria 3521
17 Ga0070659_100090109 3300005366 Bacteria 2458
18 Ga0070694_100078176 3300005444 Bacteria 2294
19 Ga0070678_100012446 3300005456 Bacteria 5289
20 Ga0070662_100092433 3300005457 Bacteria 2274
21 Ga0070681_10031583 3300005458 Bacteria 5316
22 Ga0070681_10162691 3300005458 Bacteria 2156
23 Ga0070679_100099649 3300005530 Bacteria 2893
24 Ga0070684_100081884 3300005535 Bacteria 2857
25 Ga0068853_100008358 3300005539 Bacteria 8310
26 Ga0068853_100057048 3300005539 Bacteria 3369
27 Ga0070686_100035100 3300005544 Bacteria 3095
28 Ga0070704_100177549 3300005549 Bacteria 1700
29 Ga0070664_100181169 3300005564 Bacteria 1872
30 Ga0068854_100042907 3300005578 Bacteria 3204
31 Ga0068852_100066238 3300005616 Bacteria 3154
32 Ga0068859_100022884 3300005617 Bacteria 6266
33 Ga0068859_100057257 3300005617 Bacteria 3926
34 Ga0068864_100043961 3300005618 Bacteria 3826
35 Ga0068864_100059138 3300005618 Bacteria 3315
36 Ga0068863_100081401 3300005841 Bacteria 3067
37 Ga0068863_100122960 3300005841 Bacteria 2476
38 Ga0068863_100182607 3300005841 Bacteria 2014
39 Ga0068860_100041017 3300005843 Bacteria 4422
40 Ga0068862_100155162 3300005844 Bacteria 2040
41 Ga0068862_100156657 3300005844 Bacteria 2031
42 Ga0068871_100055487 3300006358 Bacteria 3216
43 Ga0075428_100017925 3300006844 Bacteria 7824
44 Ga0097620_100022884 3300006931 Bacteria 6266
45 Ga0097620_100057253 3300006931 Bacteria 3926
46 Ga0105240_10028037 3300009093 Bacteria 7364
47 Ga0105245_10032235 3300009098 Bacteria 4640
48 Ga0105247_10036600 3300009101 Bacteria 2992
49 Ga0105248_10105256 3300009177 Bacteria 3181
50 Ga0105249_10001590 3300009553 Bacteria 19896
51 Ga0105249_10077207 3300009553 Bacteria 3088
52 Ga0105249_10150953 3300009553 Bacteria 2237
53 Ga0105239_10012390 3300010375 Bacteria 9495
54 Ga0157370_10002731 3300013104 Bacteria 21113
55 Ga0163162_10033941 3300013306 Bacteria 5074
56 Ga0157372_10033696 3300013307 Bacteria 5627
57 Ga0157372_10064292 3300013307 Bacteria 4117
58 Ga0157375_10095503 3300013308 Bacteria 3044
59 Ga0157380_10003749 3300014326 Bacteria 10453
60 Ga0157380_10184748 3300014326 Bacteria 1835
61 Ga0163161_10000493 3300017792 Bacteria 32442
62 Ga0163161_10008733 3300017792 Bacteria 7004
63 Ga0207682_10005932 3300025893 Bacteria 4944
64 Ga0207705_10017474 3300025909 Bacteria 5137
65 Ga0207707_10003947 3300025912 Bacteria 13173
66 Ga0207695_10063685 3300025913 Bacteria 3800
67 Ga0207670_10010107 3300025936 Bacteria 5418
68 Ga0207670_10038955 3300025936 Bacteria 3108
69 Ga0207711_10030526 3300025941 Bacteria 4546
70 Ga0207689_10037349 3300025942 Bacteria 4029
71 Ga0207712_10016739 3300025961 Bacteria 4754
72 Ga0207677_10022716 3300026023 Bacteria 3860
73 Ga0207703_10026141 3300026035 Bacteria 4593
74 Ga0207639_10005043 3300026041 Bacteria 8894
75 Ga0207708_10155199 3300026075 Bacteria 1805
76 Ga0207641_10006249 3300026088 Bacteria 10079
77 Ga0207641_10078858 3300026088 Bacteria 2853
78 Ga0207641_10165249 3300026088 Bacteria 2015
79 Ga0207676_10006117 3300026095 Bacteria 8496
80 Ga0207676_10026958 3300026095 Bacteria 4275
81 Ga0207674_10031606 3300026116 Bacteria 5559
82 Ga0207674_10041361 3300026116 Bacteria 4768
83 Ga0207683_10028841 3300026121 Bacteria 4802
84 Ga0268264_10004532 3300028381 Bacteria 11843
85 Ga0268264_10143231 3300028381 Bacteria 2134
86 Ga0307515_10061580 3300028794 Bacteria 5319
87 Ga0316183_1197657 3300030742 Bacteria 15862
88 Ga0316181_1029443 3300030744 Bacteria 8188
89 Ga0265332_10003833 3300031238 Bacteria 7182
90 Ga0265316_10005460 3300031344 Bacteria 12342
91 Ga0307509_10000116 3300031507 Bacteria 116150
92 Ga0307509_10036723 3300031507 Bacteria 5362
93 Ga0307408_100040213 3300031548 Bacteria 3310
94 Ga0307408_100046057 3300031548 Bacteria 3118
95 Ga0307508_10004679 3300031616 Bacteria 13272
96 Ga0307405_10003541 3300031731 Bacteria 7195
97 Ga0307405_10016358 3300031731 Bacteria 4045
98 Ga0307413_10002282 3300031824 Bacteria 7753
99 Ga0307413_10015900 3300031824 Bacteria 3869
100 Ga0307410_10027446 3300031852 Bacteria 3599
101 Ga0307406_10008313 3300031901 Bacteria 5784
102 Ga0307406_10018539 3300031901 Bacteria 4068
103 Ga0307406_10019741 3300031901 Bacteria 3959
104 Ga0307406_10146273 3300031901 Bacteria 1680
105 Ga0307407_10016119 3300031903 Bacteria 3712
106 Ga0307409_100001760 3300031995 Bacteria 10941
107 Ga0307409_100038461 3300031995 Bacteria 3539
108 Ga0307409_100177537 3300031995 Bacteria 1881
109 Ga0307416_100016890 3300032002 Bacteria 5087
110 Ga0307414_10056290 3300032004 Bacteria 2758
111 Ga0307411_10015681 3300032005 Bacteria 4266
112 Ga0307411_10017821 3300032005 Bacteria 4059
113 Ga0307415_100030370 3300032126 Bacteria 3468
114 Ga0373949_0000503 3300035090 Bacteria 13038
115 Ga0373936_0000027 3300035113 Bacteria 119134
116 Ga0373961_0000109 3300035241 Bacteria 42941
117 Ga0373937_0272822 3300036401 Bacteria 1597
118 Ga0451837_1812487 3300041494 Bacteria 2981
119 Ga0451577_0000200 3300042876 Bacteria 125103
120 Ga0451577_0002361 3300042876 Bacteria 22704
121 Ga0451577_0003863 3300042876 Bacteria 16270
122 Ga0451577_0005224 3300042876 Bacteria 13364
123 Ga0451577_0006094 3300042876 Bacteria 12122
124 Ga0451577_0015217 3300042876 Bacteria 7158
125 Ga0451577_0085791 3300042876 Bacteria 2809
126 Ga0451577_0092123 3300042876 Bacteria 2706
127 Ga0451577_0268265 3300042876 Bacteria 1546
128 Ga0453683_0000072 3300044673 Bacteria 154688
129 Ga0453683_0000432 3300044673 Bacteria 47934
130 Ga0453683_0004426 3300044673 Bacteria 9969
131 Ga0453683_0008978 3300044673 Bacteria 6681
132 Ga0453683_0044853 3300044673 Bacteria 2772
133 Ga0453683_0120772 3300044673 Bacteria 1650
134 Ga0453684_0000091 3300044712 Bacteria 387720
135 Ga0453684_0000649 3300044712 Bacteria 125150
136 Ga0453684_0000892 3300044712 Bacteria 99596
137 Ga0453684_0001006 3300044712 Bacteria 91343
138 Ga0453684_0003158 3300044712 Bacteria 37931
139 Ga0453684_0003905 3300044712 Bacteria 32755
140 Ga0453684_0014339 3300044712 Bacteria 12693
141 Ga0453684_0014953 3300044712 Bacteria 12337
142 Ga0453684_0031356 3300044712 Bacteria 7474
143 Ga0453684_0033339 3300044712 Bacteria 7183
144 Ga0453684_0051466 3300044712 Bacteria 5398
145 Ga0453684_0061626 3300044712 Bacteria 4814
146 Ga0453684_0081987 3300044712 Bacteria 4020
147 Ga0451576_0000083 3300045051 Bacteria 236908
148 Ga0451576_0000941 3300045051 Bacteria 54885
149 Ga0451576_0001301 3300045051 Bacteria 43240
150 Ga0451576_0002219 3300045051 Bacteria 29870
151 Ga0451576_0002269 3300045051 Bacteria 29343
152 Ga0451576_0020858 3300045051 Bacteria 7131
153 Ga0451576_0156013 3300045051 Bacteria 2381
154 Ga0451576_0254881 3300045051 Bacteria 1834
155 Ga0495668_0006608 3300046616 Bacteria 7566
156 Ga0496115_0013894 3300048918 Bacteria 6094
157 Ga0496125_0000031 3300048928 Bacteria 365156
158 Ga0496126_0110078 3300048929 Bacteria 2400
159 Ga0501070_0045274 3300049586 Bacteria 3659
160 Ga0501072_0024259 3300049588 Bacteria 4717
161 Ga0501216_000238 3300049660 Bacteria 6107
162 Ga0501230_000066 3300049667 Bacteria 6946
163 Ga0501225_0003786 3300049705 Bacteria 4546
164 Ga0501263_000350 3300049760 Bacteria 3278
165 Ga0500566_0001252 3300053094 Bacteria 14831
166 Ga0500640_000178 3300053095 Bacteria 13164
167 Ga0500595_000400 3300053119 Bacteria 27820
168 Ga0500614_000539 3300053123 Bacteria 9736
169 Ga0500568_0012558 3300053139 Bacteria 3888
170 Ga0500585_013106 3300053144 Bacteria 2516
171 Ga0500603_003332 3300053150 Bacteria 3455
172 Ga0500630_026287 3300053159 Bacteria 2869
173 Ga0500639_051022 3300053163 Bacteria 2154
174 2842908369 2842903701 Bacteria 6986368
175 2881250168 2881247448 Bacteria 3717788
176 2911141985 2911138879 Bacteria 5811561
177 Ga0307507_10085919
178 LJQas_1000249
179 Ga0065165_1000145
180 Ga0065704_10100995
181 Ga0065704_10102957
182 Ga0065707_10082675
183 Ga0070658_10002477
184 Ga0070658_10171220
185 Ga0070690_100005163
186 Ga0070670_100017663
187 Ga0070677_10005365
188 Ga0070689_100033748
189 Ga0070689_100052025
190 Ga0070661_100033589
191 Ga0070675_100108313
192 Ga0070671_100048814
193 Ga0070659_100090109
194 Ga0070694_100078176
195 Ga0070678_100012446
196 Ga0070662_100092433
197 Ga0070681_10031583
198 Ga0070681_10162691
199 Ga0070679_100099649
200 Ga0070684_100081884
201 Ga0068853_100008358
202 Ga0068853_100057048
203 Ga0070686_100035100
204 Ga0070704_100177549
205 Ga0070664_100181169
206 Ga0068854_100042907
207 Ga0068852_100066238
208 Ga0068859_100022884
209 Ga0068859_100057257
210 Ga0068864_100043961
211 Ga0068864_100059138
212 Ga0068863_100081401
213 Ga0068863_100122960
214 Ga0068863_100182607
215 Ga0068860_100041017
216 Ga0068862_100155162
217 Ga0068862_100156657
218 Ga0068871_100055487
219 Ga0075428_100017925
220 Ga0097620_100022884
221 Ga0097620_100057253
222 Ga0105240_10028037
223 Ga0105245_10032235
224 Ga0105247_10036600
225 Ga0105248_10105256
226 Ga0105249_10001590
227 Ga0105249_10077207
228 Ga0105249_10150953
229 Ga0105239_10012390
230 Ga0157370_10002731
231 Ga0163162_10033941
232 Ga0157372_10033696
233 Ga0157372_10064292
234 Ga0157375_10095503
235 Ga0157380_10003749
236 Ga0157380_10184748
237 Ga0163161_10000493
238 Ga0163161_10008733
239 Ga0207682_10005932
240 Ga0207705_10017474
241 Ga0207707_10003947
242 Ga0207695_10063685
243 Ga0207670_10010107
244 Ga0207670_10038955
245 Ga0207711_10030526
246 Ga0207689_10037349
247 Ga0207712_10016739
248 Ga0207677_10022716
249 Ga0207703_10026141
250 Ga0207639_10005043
251 Ga0207708_10155199
252 Ga0207641_10006249
253 Ga0207641_10078858
254 Ga0207641_10165249
255 Ga0207676_10006117
256 Ga0207676_10026958
257 Ga0207674_10031606
258 Ga0207674_10041361
259 Ga0207683_10028841
260 Ga0268264_10004532
261 Ga0268264_10143231
262 Ga0307515_10061580
263 Ga0316183_1197657
264 Ga0316181_1029443
265 Ga0265332_10003833
266 Ga0265316_10005460
267 Ga0307509_10000116
268 Ga0307509_10036723
269 Ga0307408_100040213
270 Ga0307408_100046057
271 Ga0307508_10004679
272 Ga0307405_10003541
273 Ga0307405_10016358
274 Ga0307413_10002282
275 Ga0307413_10015900
276 Ga0307410_10027446
277 Ga0307406_10008313
278 Ga0307406_10018539
279 Ga0307406_10019741
280 Ga0307406_10146273
281 Ga0307407_10016119
282 Ga0307409_100001760
283 Ga0307409_100038461
284 Ga0307409_100177537
285 Ga0307416_100016890
286 Ga0307414_10056290
287 Ga0307411_10015681
288 Ga0307411_10017821
289 Ga0307415_100030370
290 Ga0373949_0000503
291 Ga0373936_0000027
292 Ga0373961_0000109
293 Ga0373937_0272822
294 Ga0451837_1812487
295 Ga0451577_0000200
296 Ga0451577_0002361
297 Ga0451577_0003863
298 Ga0451577_0005224
299 Ga0451577_0006094
300 Ga0451577_0015217
301 Ga0451577_0085791
302 Ga0451577_0092123
303 Ga0451577_0268265
304 Ga0453683_0000072
305 Ga0453683_0000432
306 Ga0453683_0004426
307 Ga0453683_0008978
308 Ga0453683_0044853
309 Ga0453683_0120772
310 Ga0453684_0000091
311 Ga0453684_0000649
312 Ga0453684_0000892
313 Ga0453684_0001006
314 Ga0453684_0003158
315 Ga0453684_0003905
316 Ga0453684_0014339
317 Ga0453684_0014953
318 Ga0453684_0031356
319 Ga0453684_0033339
320 Ga0453684_0051466
321 Ga0453684_0061626
322 Ga0453684_0081987
323 Ga0451576_0000083
324 Ga0451576_0000941
325 Ga0451576_0001301
326 Ga0451576_0002219
327 Ga0451576_0002269
328 Ga0451576_0020858
329 Ga0451576_0156013
330 Ga0451576_0254881
331 Ga0495668_0006608
332 Ga0496115_0013894
333 Ga0496125_0000031
334 Ga0496126_0110078
335 Ga0501070_0045274
336 Ga0501072_0024259
337 Ga0501216_000238
338 Ga0501230_000066
339 Ga0501225_0003786
340 Ga0501263_000350
341 Ga0500566_0001252
342 Ga0500640_000178
343 Ga0500595_000400
344 Ga0500614_000539
345 Ga0500568_0012558
346 Ga0500585_013106
347 Ga0500603_003332
348 Ga0500630_026287
349 Ga0500639_051022
350 2842908369
351 2881250168
352 2911141985

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03129

HGTP_anticodon

Anticodon binding domain

315

418

0.94

PF09180

ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

464

522

0.94

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

123

299

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9501 3 490
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9481 3 490
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9413 3 490
5xip-assembly2.cif.gz_D crystal structure of eimeria tenella prolyl-trna synthetase (etprs) in complex with halofuginone 0.9394 6 490
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9393 3 490
ID Description Score Start End Superfamily
af_A0A1D6E223_207_318_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.967 185 292 3.30.930.10
1hc7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9511 295 399 3.40.50.800
1h4tB03 Alpha Beta;2-Layer Sandwich;Translation Initiation Factor IF3;C-terminal domain of ProRS 0.9467 419 489 3.30.110.30
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9427 120 294 3.30.930.10
af_Q0D8E4_1_175_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9375 120 294 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A812SZT6-F1-model_v4 deleted 0.9898 190 465
AF-A0A0B7IAQ6-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9836 279 410 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A7V9US87-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) 0.9822 190 490 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A7V9US87-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) 0.979 190 490 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A855K4B4-F1-model_v4 Proline--tRNA ligase 0.9788 190 272 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101

Map