F266943

General Info

Members Datasets Scaffolds Average Seq Length
175 142 350 171

Family's Representative Sequence

Representative Sequence 3300046523|Ga0495644_0261568|Ga0495644_0261568_71_583
Length 159
Sequence MSYSRRQVIVATAGLAANAQRRSSELDMDIKRNGSRPSAKGSSDWFTGSVRVDPLFQAPDPARVGGGQVTFEPGARTAWHTHPVGQTLIITAGLGWVQRDGGPVEEVRPGDVVWFPPGLRHWHGASPTTAMTHIAIQESLSGKNVDWLEKISDEQYRRT

Samples

Sample ID Description Type Environment
1 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
18 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
19 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
20 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
44 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
52 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
53 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
54 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
57 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
58 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
89 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
90 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
93 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
94 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
115 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
116 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
117 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
122 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
123 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
124 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
125 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
126 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
129 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
130 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
131 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
132 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
133 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
134 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
135 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
136 3005506211 Bradyrhizobium diazoefficiens SZCCT0449 Isolate Unclassified
137 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
138 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
139 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
140 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
141 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
142 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92
Metatranscriptomes 0
Isolates 8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.29
Nodule 12
Rhizoplane 8.57
Rhizosphere 62.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495644_0261568 3300046523 Bacteria 673
2 rootH1_10023425 3300003323 Bacteria 2573
3 Ga0070658_10013868 3300005327 Bacteria 6469
4 Ga0070682_100608375 3300005337 Bacteria 864
5 Ga0070660_100288071 3300005339 Bacteria 1345
6 Ga0070711_100246929 3300005439 Bacteria 1398
7 Ga0070663_100096921 3300005455 Bacteria 2194
8 Ga0070663_100142031 3300005455 Bacteria 1834
9 Ga0070693_100403896 3300005547 Bacteria 948
10 Ga0068858_101001040 3300005842 Bacteria 819
11 Ga0068862_100029967 3300005844 Bacteria 4584
12 Ga0081455_10012933 3300005937 Bacteria 8278
13 Ga0081455_10080857 3300005937 Bacteria 2663
14 Ga0075369_10033573 3300006186 Bacteria 2175
15 Ga0075428_100028913 3300006844 Bacteria 6134
16 Ga0075430_100145405 3300006846 Bacteria 1974
17 Ga0075433_10680978 3300006852 Bacteria 901
18 Ga0068865_100304599 3300006881 Bacteria 1276
19 Ga0099825_1029155 3300006941 Bacteria 2597
20 Ga0099824_1017201 3300006942 Bacteria 6331
21 Ga0099823_1018975 3300006944 Bacteria 6599
22 Ga0099795_10198680 3300007788 Bacteria 845
23 Ga0111539_10524298 3300009094 Bacteria 1380
24 Ga0105245_10002053 3300009098 Bacteria 18257
25 Ga0105247_10004106 3300009101 Bacteria 9350
26 Ga0105247_10621390 3300009101 Bacteria 804
27 Ga0105243_10084381 3300009148 Bacteria 2601
28 Ga0105243_10213692 3300009148 Bacteria 1700
29 Ga0105243_10890327 3300009148 Bacteria 885
30 Ga0105241_10002237 3300009174 Bacteria 14551
31 Ga0105242_10565208 3300009176 Bacteria 1093
32 Ga0105248_10005463 3300009177 Bacteria 13965
33 Ga0105248_11228392 3300009177 Bacteria 847
34 Ga0105237_10009116 3300009545 Bacteria 10661
35 Ga0105238_10239808 3300009551 Bacteria 1790
36 Ga0105238_10424085 3300009551 Bacteria 1325
37 Ga0105249_10019508 3300009553 Bacteria 6050
38 Ga0105249_10203932 3300009553 Bacteria 1936
39 Ga0099796_10022408 3300010159 Bacteria 1959
40 Ga0105239_10010528 3300010375 Bacteria 10337
41 Ga0105239_10206883 3300010375 Bacteria 2199
42 Ga0105239_10487657 3300010375 Bacteria 1400
43 Ga0105246_10070821 3300011119 Bacteria 2453
44 Ga0157378_10099899 3300013297 Bacteria 2648
45 Ga0163162_10004602 3300013306 Bacteria 13293
46 Ga0163162_10111117 3300013306 Bacteria 2838
47 Ga0163163_10002749 3300014325 Bacteria 14846
48 Ga0163163_10382746 3300014325 Bacteria 1464
49 Ga0157380_10005522 3300014326 Bacteria 8840
50 Ga0157380_10480180 3300014326 Bacteria 1202
51 Ga0157379_11060629 3300014968 Bacteria 775
52 Ga0157376_10629165 3300014969 Bacteria 1071
53 Ga0163161_10009504 3300017792 Bacteria 6728
54 Ga0213876_10195743 3300021384 Bacteria 1074
55 Ga0213875_10358594 3300021388 Bacteria 693
56 Ga0209233_1003460 3300025261 Bacteria 5561
57 Ga0209455_1003568 3300025272 Bacteria 5433
58 Ga0207710_10399639 3300025900 Bacteria 705
59 Ga0207688_10024985 3300025901 Bacteria 3278
60 Ga0207687_10798640 3300025927 Bacteria 805
61 Ga0207704_10345942 3300025938 Bacteria 1156
62 Ga0207678_10185792 3300026067 Bacteria 1775
63 Ga0207675_100066812 3300026118 Bacteria 3361
64 Ga0209389_1000010 3300027296 Bacteria 223892
65 Ga0209389_1000045 3300027296 Bacteria 118598
66 Ga0209589_1000016 3300027357 Bacteria 223788
67 Ga0209489_100016 3300027361 Bacteria 223873
68 Ga0209489_100210 3300027361 Bacteria 96217
69 Ga0209700_100116 3300027363 Bacteria 115661
70 Ga0268265_11886111 3300028380 Bacteria 604
71 Ga0265326_10104788 3300028558 Bacteria 802
72 Ga0265323_10000739 3300028653 Bacteria 17581
73 Ga0265336_10000917 3300028666 Bacteria 14953
74 Ga0265338_10000116 3300028800 Bacteria 146839
75 Ga0265330_10048359 3300031235 Bacteria 1870
76 Ga0307416_100675797 3300032002 Bacteria 1120
77 Ga0373927_0311446 3300035695 Bacteria 1036
78 Ga0373947_0014329 3300035725 Bacteria 4548
79 Ga0373947_0130521 3300035725 Bacteria 1604
80 Ga0395905_0378035 3300037471 Bacteria 1310
81 Ga0436364_1068447 3300037853 Bacteria 1065
82 Ga0436365_1722995 3300039437 Bacteria 4395
83 Ga0436360_0158331 3300039438 Bacteria 651
84 Ga0466969_0172780 3300044656 Bacteria 990
85 Ga0466965_0022721 3300044683 Bacteria 3025
86 Ga0466966_0000528 3300044684 Bacteria 24404
87 Ga0466966_0088752 3300044684 Bacteria 1921
88 Ga0466961_0011653 3300044693 Bacteria 5620
89 Ga0466964_0045441 3300044706 Bacteria 1787
90 Ga0466964_0139060 3300044706 Bacteria 1114
91 Ga0466970_0087041 3300044765 Bacteria 1694
92 Ga0466970_0116866 3300044765 Bacteria 1459
93 Ga0466960_0020046 3300044901 Bacteria 2956
94 Ga0466959_0040624 3300045049 Bacteria 3436
95 Ga0466959_0090031 3300045049 Bacteria 2204
96 Ga0466959_0175784 3300045049 Bacteria 1500
97 Ga0466967_0453566 3300045976 Bacteria 1253
98 Ga0495580_0288486 3300046472 Bacteria 1119
99 Ga0495580_0887440 3300046472 Bacteria 574
100 Ga0495585_0466795 3300046492 Bacteria 602
101 Ga0495606_0002491 3300046507 Bacteria 21290
102 Ga0495606_0050115 3300046507 Bacteria 2733
103 Ga0495616_0092259 3300046513 Bacteria 1432
104 Ga0495632_0033057 3300046519 Bacteria 2659
105 Ga0495643_0070136 3300046522 Bacteria 1841
106 Ga0495609_0083020 3300046538 Bacteria 1399
107 Ga0495645_0477192 3300046543 Bacteria 783
108 Ga0495633_0102178 3300046558 Bacteria 1331
109 Ga0495668_0033293 3300046616 Bacteria 2896
110 Ga0495625_0209130 3300046660 Bacteria 1283
111 Ga0495588_0203218 3300046674 Bacteria 1047
112 Ga0495649_0158572 3300046694 Bacteria 1187
113 Ga0495636_0000649 3300047318 Bacteria 12781
114 Ga0495674_0974175 3300047319 Bacteria 651
115 Ga0495685_090109 3300047447 Bacteria 1017
116 Ga0495626_0268062 3300048091 Bacteria 681
117 Ga0496101_0047861 3300048904 Bacteria 3071
118 Ga0496102_0037267 3300048905 Bacteria 4385
119 Ga0496104_0209292 3300048907 Bacteria 1862
120 Ga0496104_1458452 3300048907 Bacteria 587
121 Ga0496106_0219344 3300048909 Bacteria 1516
122 Ga0496107_0139269 3300048910 Bacteria 1793
123 Ga0496107_0477494 3300048910 Bacteria 925
124 Ga0496108_0136548 3300048911 Bacteria 2110
125 Ga0496109_0064341 3300048912 Bacteria 3356
126 Ga0496109_0207792 3300048912 Bacteria 1841
127 Ga0496110_0100377 3300048913 Bacteria 2594
128 Ga0496111_0764691 3300048914 Bacteria 700
129 Ga0496112_0033453 3300048915 Bacteria 4998
130 Ga0496112_0299431 3300048915 Bacteria 1554
131 Ga0496115_0443064 3300048918 Bacteria 1050
132 Ga0496118_0198544 3300048921 Bacteria 1191
133 Ga0496121_0190573 3300048924 Bacteria 1470
134 Ga0496125_0034446 3300048928 Bacteria 4464
135 Ga0496125_0610104 3300048928 Bacteria 594
136 Ga0496126_0438507 3300048929 Bacteria 1053
137 Ga0501033_0674501 3300049570 Bacteria 705
138 Ga0501034_0089738 3300049571 Bacteria 3072
139 Ga0501047_0205441 3300049581 Bacteria 1829
140 Ga0501075_0888956 3300049591 Bacteria 677
141 Ga0501035_0231914 3300049822 Bacteria 1573
142 nmdc:mga03n38_29177_c1 3300050490 Bacteria 2306
143 nmdc:mga0k408_1970_c1 3300050493 Bacteria 11006
144 nmdc:mga0k408_680628_c1 3300050493 Bacteria 603
145 nmdc:mga04h51_15216_c1 3300050495 Bacteria 2213
146 nmdc:mga07m45_9683_c1 3300050496 Bacteria 5008
147 nmdc:mga05p37_823262_c1 3300050507 Bacteria 1012
148 nmdc:mga09592_51919_c1 3300050508 Bacteria 3459
149 nmdc:mga0qj67_440393_c1 3300050509 Bacteria 1050
150 nmdc:mga0sz30_10640_c1 3300050516 Bacteria 3529
151 Ga0495595_0085865 3300053084 Bacteria 1505
152 Ga0495619_0098549 3300053085 Bacteria 1987
153 Ga0500651_0291662 3300053093 Bacteria 938
154 Ga0500651_0604815 3300053093 Bacteria 594
155 Ga0500557_000019 3300053105 Bacteria 93216
156 Ga0500595_009967 3300053119 Bacteria 3801
157 Ga0500616_0000001 3300053153 Bacteria 1986011
158 Ga0500616_0000390 3300053153 Bacteria 61067
159 Ga0500616_0013461 3300053153 Bacteria 4747
160 Ga0500616_0105387 3300053153 Bacteria 1371
161 Ga0500645_005957 3300053730 Bacteria 4413
162 2508544752 2508501009 Bacteria 7784016
163 2513676130 2513237098 Bacteria 9902361
164 2515627900 2515154112 Bacteria 8294334
165 2517102534 2517093001 Bacteria 9002274
166 2524440411 2524023205 Bacteria 8918781
167 2922390613 2922386360 Bacteria 7017218
168 2935923761 2935916978 Bacteria 9113783
169 3005506422 3005506211 Bacteria 6943378
170 3005721695 3005718088 Bacteria 8283608
171 8006988098 8006984368 Bacteria 9651211
172 8016588219 8016583857 Bacteria 10421953
173 8019637388 8019629233 Bacteria 8687553
174 8019639848 8019638758 Bacteria 9062356
175 8019667751 8019659431 Bacteria 8577854
176 Ga0495644_0261568
177 rootH1_10023425
178 Ga0070658_10013868
179 Ga0070682_100608375
180 Ga0070660_100288071
181 Ga0070711_100246929
182 Ga0070663_100096921
183 Ga0070663_100142031
184 Ga0070693_100403896
185 Ga0068858_101001040
186 Ga0068862_100029967
187 Ga0081455_10012933
188 Ga0081455_10080857
189 Ga0075369_10033573
190 Ga0075428_100028913
191 Ga0075430_100145405
192 Ga0075433_10680978
193 Ga0068865_100304599
194 Ga0099825_1029155
195 Ga0099824_1017201
196 Ga0099823_1018975
197 Ga0099795_10198680
198 Ga0111539_10524298
199 Ga0105245_10002053
200 Ga0105247_10004106
201 Ga0105247_10621390
202 Ga0105243_10084381
203 Ga0105243_10213692
204 Ga0105243_10890327
205 Ga0105241_10002237
206 Ga0105242_10565208
207 Ga0105248_10005463
208 Ga0105248_11228392
209 Ga0105237_10009116
210 Ga0105238_10239808
211 Ga0105238_10424085
212 Ga0105249_10019508
213 Ga0105249_10203932
214 Ga0099796_10022408
215 Ga0105239_10010528
216 Ga0105239_10206883
217 Ga0105239_10487657
218 Ga0105246_10070821
219 Ga0157378_10099899
220 Ga0163162_10004602
221 Ga0163162_10111117
222 Ga0163163_10002749
223 Ga0163163_10382746
224 Ga0157380_10005522
225 Ga0157380_10480180
226 Ga0157379_11060629
227 Ga0157376_10629165
228 Ga0163161_10009504
229 Ga0213876_10195743
230 Ga0213875_10358594
231 Ga0209233_1003460
232 Ga0209455_1003568
233 Ga0207710_10399639
234 Ga0207688_10024985
235 Ga0207687_10798640
236 Ga0207704_10345942
237 Ga0207678_10185792
238 Ga0207675_100066812
239 Ga0209389_1000010
240 Ga0209389_1000045
241 Ga0209589_1000016
242 Ga0209489_100016
243 Ga0209489_100210
244 Ga0209700_100116
245 Ga0268265_11886111
246 Ga0265326_10104788
247 Ga0265323_10000739
248 Ga0265336_10000917
249 Ga0265338_10000116
250 Ga0265330_10048359
251 Ga0307416_100675797
252 Ga0373927_0311446
253 Ga0373947_0014329
254 Ga0373947_0130521
255 Ga0395905_0378035
256 Ga0436364_1068447
257 Ga0436365_1722995
258 Ga0436360_0158331
259 Ga0466969_0172780
260 Ga0466965_0022721
261 Ga0466966_0000528
262 Ga0466966_0088752
263 Ga0466961_0011653
264 Ga0466964_0045441
265 Ga0466964_0139060
266 Ga0466970_0087041
267 Ga0466970_0116866
268 Ga0466960_0020046
269 Ga0466959_0040624
270 Ga0466959_0090031
271 Ga0466959_0175784
272 Ga0466967_0453566
273 Ga0495580_0288486
274 Ga0495580_0887440
275 Ga0495585_0466795
276 Ga0495606_0002491
277 Ga0495606_0050115
278 Ga0495616_0092259
279 Ga0495632_0033057
280 Ga0495643_0070136
281 Ga0495609_0083020
282 Ga0495645_0477192
283 Ga0495633_0102178
284 Ga0495668_0033293
285 Ga0495625_0209130
286 Ga0495588_0203218
287 Ga0495649_0158572
288 Ga0495636_0000649
289 Ga0495674_0974175
290 Ga0495685_090109
291 Ga0495626_0268062
292 Ga0496101_0047861
293 Ga0496102_0037267
294 Ga0496104_0209292
295 Ga0496104_1458452
296 Ga0496106_0219344
297 Ga0496107_0139269
298 Ga0496107_0477494
299 Ga0496108_0136548
300 Ga0496109_0064341
301 Ga0496109_0207792
302 Ga0496110_0100377
303 Ga0496111_0764691
304 Ga0496112_0033453
305 Ga0496112_0299431
306 Ga0496115_0443064
307 Ga0496118_0198544
308 Ga0496121_0190573
309 Ga0496125_0034446
310 Ga0496125_0610104
311 Ga0496126_0438507
312 Ga0501033_0674501
313 Ga0501034_0089738
314 Ga0501047_0205441
315 Ga0501075_0888956
316 Ga0501035_0231914
317 nmdc:mga03n38_29177_c1
318 nmdc:mga0k408_1970_c1
319 nmdc:mga0k408_680628_c1
320 nmdc:mga04h51_15216_c1
321 nmdc:mga07m45_9683_c1
322 nmdc:mga05p37_823262_c1
323 nmdc:mga09592_51919_c1
324 nmdc:mga0qj67_440393_c1
325 nmdc:mga0sz30_10640_c1
326 Ga0495595_0085865
327 Ga0495619_0098549
328 Ga0500651_0291662
329 Ga0500651_0604815
330 Ga0500557_000019
331 Ga0500595_009967
332 Ga0500616_0000001
333 Ga0500616_0000390
334 Ga0500616_0013461
335 Ga0500616_0105387
336 Ga0500645_005957
337 2508544752
338 2513676130
339 2515627900
340 2517102534
341 2524440411
342 2922390613
343 2935923761
344 3005506422
345 3005721695
346 8006988098
347 8016588219
348 8019637388
349 8019639848
350 8019667751

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

67

136

0.88

PF02311

AraC_binding

AraC-like ligand binding domain

69

157

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uxa-assembly3.cif.gz_R improved variant of (r)-selective manganese-dependent hydroxynitrile lyase from bacteria 0.961 37 167
4bif-assembly2.cif.gz_H biochemical and structural characterisation of a novel manganese- dependent hydroxynitrile lyase from bacteria 0.9591 37 167
4uxa-assembly3.cif.gz_R improved variant of (r)-selective manganese-dependent hydroxynitrile lyase from bacteria 0.9539 37 167
4bif-assembly2.cif.gz_H biochemical and structural characterisation of a novel manganese- dependent hydroxynitrile lyase from bacteria 0.952 37 167
2ozj-assembly2.cif.gz_B-3 crystal structure of a cupin superfamily protein (dsy2733) from desulfitobacterium hafniense dcb-2 at 1.60 a resolution 0.9247 59 149
ID Description Score Start End Superfamily
4bifA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9585 37 167 2.60.120.10
4bifA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9513 37 167 2.60.120.10
2ozjB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9105 59 149 2.60.120.10
af_P17410_9_96_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9051 73 145 2.60.120.10
2f4pA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9045 48 166 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A1C8ZTZ7-F1-model_v4 Cupin type-2 domain-containing protein 0.9896 48 166
AF-A0A441YT96-F1-model_v4 Cupin domain-containing protein 0.9887 60 167
AF-A0A659YKM7-F1-model_v4 deleted 0.9866 77 162
AF-A0A1H7G865-F1-model_v4 Cupin domain-containing protein 0.9862 75 158
AF-A0A7W7ZJ22-F1-model_v4 Quercetin dioxygenase-like cupin family protein 0.9857 55 167 GO:0051213

Map