F265265

General Info

Members Datasets Scaffolds Average Seq Length
174 117 348 507

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0015019|Ga0496119_0015019_1461_3083
Length 540
Sequence MTPHMHKRLQAAEGGSAISGGREINEPRRLADLMAGLVNVPSELVVRDVTLDSRAASPGALFLACSGRTHHGLEFAQQAVSLGASAVLYEETAGQAVPDFGSDIFVAGVPQLSQHVGTIADRFFREPSAAVTVVGITGTNGKTTCAWLLAQALQHCGRPAAYMGTLGFGVPPAVTATEHTTSDAVTVHRHLAALRNLGAECVAMEVSSHAIDQSRVGAVRFNTAAFTNLTRDHLDYHGTMEAYGNAKARLFQWPSLANRVINADDAFGAKLAGLPSSSHLVLTSRTSIVPAGVEQVRATRATPQSAGLAIDVESSWGNIQLNVPLIGKFNVDNVLTVLAVLLAWDIPLARAAAAIEKCRPPSGRMELFGGTATSPLAIVDYSHTPDALAKALQAARPHCRGQLRVVFGCGGARDAGKRPLMGRIAAELADDVIVTDDNPRTEDPARIVADILAGMPGRDTMVEHDRKRAIQTALRRSAPGDVVVIAGKGHEDYQIYGTVKRPFSDQAVVSDELAAAAGGSGNVPPQDPGLQSSGSPGATS

Samples

Sample ID Description Type Environment
1 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
67 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
83 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
84 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
105 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
108 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
109 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
114 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
115 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
116 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
117 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.43
Metatranscriptomes 0.57
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.45
Nodule 0
Rhizoplane 4.6
Rhizosphere 75.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496119_0015019 3300048922 Bacteria 6002
2 rootH1_10108317 3300003316 Bacteria 5175
3 Ga0068869_100041413 3300005334 Bacteria 3299
4 Ga0070680_100010140 3300005336 Bacteria 7263
5 Ga0070680_100063208 3300005336 Bacteria 3031
6 Ga0070682_100069017 3300005337 Bacteria 2256
7 Ga0070713_100030417 3300005436 Bacteria 4288
8 Ga0070701_10081785 3300005438 Bacteria 1750
9 Ga0070711_100003399 3300005439 Bacteria 9272
10 Ga0070663_100098519 3300005455 Bacteria 2178
11 Ga0070681_10004886 3300005458 Bacteria 12856
12 Ga0070681_10010910 3300005458 Bacteria 8984
13 Ga0070681_10030782 3300005458 Bacteria 5386
14 Ga0070681_10052736 3300005458 Bacteria 4057
15 Ga0070699_100042067 3300005518 Bacteria 3953
16 Ga0070679_100037680 3300005530 Bacteria 4805
17 Ga0070679_100042710 3300005530 Bacteria 4515
18 Ga0070679_100047130 3300005530 Bacteria 4297
19 Ga0070684_100076169 3300005535 Bacteria 2961
20 Ga0070672_100121435 3300005543 Bacteria 2139
21 Ga0070665_100003573 3300005548 Bacteria 16475
22 Ga0070665_100008952 3300005548 Bacteria 10144
23 Ga0070665_100012130 3300005548 Bacteria 8694
24 Ga0070665_100045278 3300005548 Bacteria 4419
25 Ga0068855_100020453 3300005563 Bacteria 7937
26 Ga0068855_100026925 3300005563 Bacteria 6880
27 Ga0070664_100146318 3300005564 Bacteria 2084
28 Ga0068859_100004269 3300005617 Bacteria 14594
29 Ga0068859_100100600 3300005617 Bacteria 2947
30 Ga0068864_100127074 3300005618 Bacteria 2285
31 Ga0068870_10005974 3300005840 Bacteria 5348
32 Ga0068858_100003724 3300005842 Bacteria 15093
33 Ga0068858_100007132 3300005842 Bacteria 10855
34 Ga0068860_100002783 3300005843 Bacteria 18194
35 Ga0068860_100093102 3300005843 Bacteria 2872
36 Ga0068871_100061584 3300006358 Bacteria 3065
37 Ga0068865_100042418 3300006881 Bacteria 3102
38 Ga0097620_100004269 3300006931 Bacteria 14594
39 Ga0097620_100100598 3300006931 Bacteria 2947
40 Ga0099795_10000327 3300007788 Bacteria 8586
41 Ga0105240_10000089 3300009093 Bacteria 185437
42 Ga0105240_10001884 3300009093 Bacteria 34865
43 Ga0105240_10008075 3300009093 Bacteria 15126
44 Ga0105240_10037859 3300009093 Bacteria 6195
45 Ga0105240_10047403 3300009093 Bacteria 5438
46 Ga0105240_10049655 3300009093 Bacteria 5294
47 Ga0105240_10049992 3300009093 Bacteria 5273
48 Ga0105240_10130196 3300009093 Bacteria 3019
49 Ga0105247_10002396 3300009101 Bacteria 12742
50 Ga0105248_10001607 3300009177 Bacteria 25120
51 Ga0105237_10022941 3300009545 Bacteria 6400
52 Ga0105238_10024323 3300009551 Bacteria 6173
53 Ga0105238_10082004 3300009551 Bacteria 3215
54 Ga0099796_10001907 3300010159 Bacteria 4414
55 Ga0105239_10171954 3300010375 Bacteria 2423
56 Ga0157370_10019137 3300013104 Bacteria 6883
57 Ga0157369_10035219 3300013105 Bacteria 5490
58 Ga0163162_10055150 3300013306 Bacteria 4000
59 Ga0157375_10050717 3300013308 Bacteria 4072
60 Ga0163163_10029120 3300014325 Bacteria 5310
61 Ga0163163_10042023 3300014325 Bacteria 4474
62 Ga0157379_10013595 3300014968 Bacteria 7132
63 Ga0157379_10070858 3300014968 Bacteria 3119
64 Ga0213876_10069172 3300021384 Bacteria 1865
65 Ga0207643_10007303 3300025908 Bacteria 5929
66 Ga0207707_10000115 3300025912 Bacteria 81416
67 Ga0207707_10000148 3300025912 Bacteria 73167
68 Ga0207707_10002174 3300025912 Bacteria 17735
69 Ga0207707_10120938 3300025912 Bacteria 2289
70 Ga0207695_10000178 3300025913 Bacteria 185676
71 Ga0207695_10012932 3300025913 Bacteria 9985
72 Ga0207695_10021988 3300025913 Bacteria 7259
73 Ga0207695_10029174 3300025913 Bacteria 6104
74 Ga0207695_10043614 3300025913 Bacteria 4780
75 Ga0207660_10012811 3300025917 Bacteria 5489
76 Ga0207660_10022449 3300025917 Bacteria 4252
77 Ga0207660_10056248 3300025917 Bacteria 2814
78 Ga0207662_10071794 3300025918 Bacteria 2097
79 Ga0207652_10047891 3300025921 Bacteria 3652
80 Ga0207652_10085028 3300025921 Bacteria 2772
81 Ga0207700_10006747 3300025928 Bacteria 6972
82 Ga0207700_10024553 3300025928 Bacteria 4173
83 Ga0207644_10000718 3300025931 Bacteria 20967
84 Ga0207706_10086965 3300025933 Bacteria 2748
85 Ga0207704_10034107 3300025938 Bacteria 2901
86 Ga0207689_10011462 3300025942 Bacteria 7599
87 Ga0207689_10068329 3300025942 Bacteria 2920
88 Ga0207679_10081356 3300025945 Bacteria 2476
89 Ga0207667_10003364 3300025949 Bacteria 19733
90 Ga0207667_10017408 3300025949 Bacteria 8089
91 Ga0207667_10028556 3300025949 Bacteria 6058
92 Ga0207658_10023399 3300025986 Bacteria 4311
93 Ga0207703_10001997 3300026035 Bacteria 17998
94 Ga0207703_10031712 3300026035 Bacteria 4180
95 Ga0207678_10015060 3300026067 Bacteria 6803
96 Ga0207702_10108512 3300026078 Bacteria 2463
97 Ga0207641_10001033 3300026088 Bacteria 28219
98 Ga0207641_10021700 3300026088 Bacteria 5277
99 Ga0207675_100032643 3300026118 Bacteria 4849
100 Ga0265356_1000730 3300028017 Bacteria 5602
101 Ga0268266_10002891 3300028379 Bacteria 17806
102 Ga0268266_10007953 3300028379 Bacteria 9481
103 Ga0268264_10000198 3300028381 Bacteria 122906
104 Ga0265334_10000055 3300028573 Bacteria 81789
105 Ga0265318_10039669 3300028577 Bacteria 1796
106 Ga0307515_10003416 3300028794 Bacteria 33442
107 Ga0307511_10000048 3300030521 Bacteria 98665
108 Ga0307511_10009582 3300030521 Bacteria 9647
109 Ga0265770_1000035 3300030878 Bacteria 13434
110 Ga0265340_10014103 3300031247 Bacteria 4183
111 Ga0307513_10011253 3300031456 Bacteria 11137
112 Ga0307513_10028805 3300031456 Bacteria 6343
113 Ga0307509_10000017 3300031507 Bacteria 265012
114 Ga0307509_10029840 3300031507 Bacteria 6044
115 Ga0307516_10012783 3300031730 Bacteria 9022
116 Ga0307413_10021676 3300031824 Bacteria 3445
117 Ga0307410_10050143 3300031852 Bacteria 2805
118 Ga0307406_10016161 3300031901 Bacteria 4332
119 Ga0307407_10039880 3300031903 Bacteria 2614
120 Ga0307409_100159917 3300031995 Bacteria 1968
121 Ga0307510_10000002 3300033180 Bacteria 801565
122 Ga0307510_10008115 3300033180 Bacteria 12505
123 Ga0373936_0001428 3300035113 Bacteria 8690
124 Ga0373927_0003030 3300035695 Bacteria 12187
125 Ga0373925_0000709 3300037068 Bacteria 31198
126 Ga0373925_0084150 3300037068 Bacteria 2424
127 Ga0436365_1414349 3300039437 Bacteria 6345
128 Ga0436360_1052058 3300039438 Bacteria 3463
129 Ga0436363_0375975 3300039450 Bacteria 36949
130 Ga0451853_0139801 3300041512 Bacteria 7051
131 Ga0466969_0000960 3300044656 Bacteria 15534
132 Ga0466966_0034719 3300044684 Bacteria 3260
133 Ga0466966_0063264 3300044684 Bacteria 2332
134 Ga0466961_0016162 3300044693 Bacteria 4791
135 Ga0466961_0042860 3300044693 Bacteria 2900
136 Ga0466964_0006646 3300044706 Bacteria 4310
137 Ga0466971_0001123 3300044719 Bacteria 11133
138 Ga0466959_0009961 3300045049 Bacteria 6774
139 Ga0466959_0058411 3300045049 Bacteria 2809
140 Ga0495590_0007330 3300046457 Bacteria 4260
141 Ga0495638_0001599 3300046460 Bacteria 20232
142 Ga0495616_0004336 3300046513 Bacteria 8956
143 Ga0495625_0029133 3300046660 Bacteria 4133
144 Ga0496102_0018217 3300048905 Bacteria 6165
145 Ga0496102_0024944 3300048905 Bacteria 5318
146 Ga0496105_0004827 3300048908 Bacteria 10186
147 Ga0496107_0065516 3300048910 Bacteria 2634
148 Ga0496108_0049938 3300048911 Bacteria 3500
149 Ga0496112_0190630 3300048915 Bacteria 2012
150 Ga0496114_0006736 3300048917 Bacteria 9050
151 Ga0496115_0107845 3300048918 Bacteria 2286
152 Ga0496116_0019387 3300048919 Bacteria 5208
153 Ga0496117_0000135 3300048920 Bacteria 160708
154 Ga0496118_0000098 3300048921 Bacteria 160610
155 Ga0496119_0038412 3300048922 Bacteria 3093
156 Ga0496120_0000543 3300048923 Bacteria 57596
157 Ga0496120_0011257 3300048923 Bacteria 6166
158 Ga0496121_0023475 3300048924 Bacteria 5938
159 Ga0496121_0033915 3300048924 Bacteria 4606
160 Ga0496121_0046907 3300048924 Bacteria 3692
161 Ga0496121_0056467 3300048924 Bacteria 3261
162 Ga0496124_0062677 3300048927 Bacteria 3110
163 Ga0496125_0002765 3300048928 Bacteria 22202
164 Ga0496126_0105145 3300048929 Bacteria 2465
165 Ga0501073_0037703 3300049589 Bacteria 3431
166 Ga0501073_0066679 3300049589 Bacteria 2509
167 Ga0501035_0072164 3300049822 Bacteria 3056
168 Ga0500643_008690 3300053087 Bacteria 3966
169 Ga0500583_0012400 3300053092 Bacteria 3250
170 Ga0500556_0000589 3300053104 Bacteria 23953
171 Ga0500568_0009379 3300053139 Bacteria 4656
172 Ga0500637_0005616 3300053178 Bacteria 6094
173 Ga0500637_0057859 3300053178 Bacteria 2217
174 Ga0466962_0025520 3300061719 Bacteria 2837
175 Ga0496119_0015019
176 rootH1_10108317
177 Ga0068869_100041413
178 Ga0070680_100010140
179 Ga0070680_100063208
180 Ga0070682_100069017
181 Ga0070713_100030417
182 Ga0070701_10081785
183 Ga0070711_100003399
184 Ga0070663_100098519
185 Ga0070681_10004886
186 Ga0070681_10010910
187 Ga0070681_10030782
188 Ga0070681_10052736
189 Ga0070699_100042067
190 Ga0070679_100037680
191 Ga0070679_100042710
192 Ga0070679_100047130
193 Ga0070684_100076169
194 Ga0070672_100121435
195 Ga0070665_100003573
196 Ga0070665_100008952
197 Ga0070665_100012130
198 Ga0070665_100045278
199 Ga0068855_100020453
200 Ga0068855_100026925
201 Ga0070664_100146318
202 Ga0068859_100004269
203 Ga0068859_100100600
204 Ga0068864_100127074
205 Ga0068870_10005974
206 Ga0068858_100003724
207 Ga0068858_100007132
208 Ga0068860_100002783
209 Ga0068860_100093102
210 Ga0068871_100061584
211 Ga0068865_100042418
212 Ga0097620_100004269
213 Ga0097620_100100598
214 Ga0099795_10000327
215 Ga0105240_10000089
216 Ga0105240_10001884
217 Ga0105240_10008075
218 Ga0105240_10037859
219 Ga0105240_10047403
220 Ga0105240_10049655
221 Ga0105240_10049992
222 Ga0105240_10130196
223 Ga0105247_10002396
224 Ga0105248_10001607
225 Ga0105237_10022941
226 Ga0105238_10024323
227 Ga0105238_10082004
228 Ga0099796_10001907
229 Ga0105239_10171954
230 Ga0157370_10019137
231 Ga0157369_10035219
232 Ga0163162_10055150
233 Ga0157375_10050717
234 Ga0163163_10029120
235 Ga0163163_10042023
236 Ga0157379_10013595
237 Ga0157379_10070858
238 Ga0213876_10069172
239 Ga0207643_10007303
240 Ga0207707_10000115
241 Ga0207707_10000148
242 Ga0207707_10002174
243 Ga0207707_10120938
244 Ga0207695_10000178
245 Ga0207695_10012932
246 Ga0207695_10021988
247 Ga0207695_10029174
248 Ga0207695_10043614
249 Ga0207660_10012811
250 Ga0207660_10022449
251 Ga0207660_10056248
252 Ga0207662_10071794
253 Ga0207652_10047891
254 Ga0207652_10085028
255 Ga0207700_10006747
256 Ga0207700_10024553
257 Ga0207644_10000718
258 Ga0207706_10086965
259 Ga0207704_10034107
260 Ga0207689_10011462
261 Ga0207689_10068329
262 Ga0207679_10081356
263 Ga0207667_10003364
264 Ga0207667_10017408
265 Ga0207667_10028556
266 Ga0207658_10023399
267 Ga0207703_10001997
268 Ga0207703_10031712
269 Ga0207678_10015060
270 Ga0207702_10108512
271 Ga0207641_10001033
272 Ga0207641_10021700
273 Ga0207675_100032643
274 Ga0265356_1000730
275 Ga0268266_10002891
276 Ga0268266_10007953
277 Ga0268264_10000198
278 Ga0265334_10000055
279 Ga0265318_10039669
280 Ga0307515_10003416
281 Ga0307511_10000048
282 Ga0307511_10009582
283 Ga0265770_1000035
284 Ga0265340_10014103
285 Ga0307513_10011253
286 Ga0307513_10028805
287 Ga0307509_10000017
288 Ga0307509_10029840
289 Ga0307516_10012783
290 Ga0307413_10021676
291 Ga0307410_10050143
292 Ga0307406_10016161
293 Ga0307407_10039880
294 Ga0307409_100159917
295 Ga0307510_10000002
296 Ga0307510_10008115
297 Ga0373936_0001428
298 Ga0373927_0003030
299 Ga0373925_0000709
300 Ga0373925_0084150
301 Ga0436365_1414349
302 Ga0436360_1052058
303 Ga0436363_0375975
304 Ga0451853_0139801
305 Ga0466969_0000960
306 Ga0466966_0034719
307 Ga0466966_0063264
308 Ga0466961_0016162
309 Ga0466961_0042860
310 Ga0466964_0006646
311 Ga0466971_0001123
312 Ga0466959_0009961
313 Ga0466959_0058411
314 Ga0495590_0007330
315 Ga0495638_0001599
316 Ga0495616_0004336
317 Ga0495625_0029133
318 Ga0496102_0018217
319 Ga0496102_0024944
320 Ga0496105_0004827
321 Ga0496107_0065516
322 Ga0496108_0049938
323 Ga0496112_0190630
324 Ga0496114_0006736
325 Ga0496115_0107845
326 Ga0496116_0019387
327 Ga0496117_0000135
328 Ga0496118_0000098
329 Ga0496119_0038412
330 Ga0496120_0000543
331 Ga0496120_0011257
332 Ga0496121_0023475
333 Ga0496121_0033915
334 Ga0496121_0046907
335 Ga0496121_0056467
336 Ga0496124_0062677
337 Ga0496125_0002765
338 Ga0496126_0105145
339 Ga0501073_0037703
340 Ga0501073_0066679
341 Ga0501035_0072164
342 Ga0500643_008690
343 Ga0500583_0012400
344 Ga0500556_0000589
345 Ga0500568_0009379
346 Ga0500637_0005616
347 Ga0500637_0057859
348 Ga0466962_0025520

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

363

489

0.94

PF08245

Mur_ligase_M

Mur ligase middle domain

136

341

0.91

PF01225

Mur_ligase

Mur ligase family, catalytic domain

45

150

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.9517 22 509
1e8c-assembly1.cif.gz_A structure of mure the udp-n-acetylmuramyl tripeptide synthetase from e. coli 0.9366 22 509
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9242 22 510
4c12-assembly1.cif.gz_A x-ray crystal structure of staphylococcus aureus mure with udp-murnac- ala-glu-lys and adp 0.9042 22 510
8g6p-assembly1.cif.gz_A crystal structure of mycobacterium thermoresistibile mure in complex with adp and 2,6-diaminopimelic acid 0.8923 21 509
ID Description Score Start End Superfamily
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9698 360 500 3.90.190.20
af_I1KPB4_561_737_3.90.190.20 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9581 371 509 3.90.190.20
1e8cA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9572 121 354 3.40.1190.10
1e8cB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.9561 360 500 3.90.190.20
1e8cA02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9372 121 354 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A357N0Q8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9762 113 201 GO:0005524
GO:0009058
GO:0016881
AF-A0A6B1GMF0-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) (Meso-A2pm-adding enzyme) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (UDP-MurNAc-tripeptide synthetase) (UDP-N-acetylmuramyl-tripeptide synthetase) 0.9725 20 512 GO:0000287
GO:0005524
GO:0005737
GO:0008360
GO:0008765
GO:0009252
GO:0051301
GO:0071555
AF-A0A354RF62-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9708 371 509 GO:0009058
GO:0016881
AF-B6CM26-F1-model_v4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9687 133 508 GO:0005524
GO:0005737
GO:0008360
GO:0009252
GO:0016881
GO:0051301
GO:0071555
AF-A0A7C3UWK1-F1-model_v4 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 0.9666 378 508 GO:0009058
GO:0016881

Map