F264798
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 174 | 134 | 158 | 704 |
Family's Representative Sequence
| Representative Sequence | 3300031344|Ga0265316_10000176|Ga0265316_1000017649 |
| Length | 740 |
| Sequence | MRTAALPQTPPVTPAAHSVRRQVLDVLASMRFAIALLTVICIASAIGTVVKQGEPLVNYVDQFGPLWAEVFGALGLYRIYSSGWFLTILAFLVVSTSLCIARNTPKILADWRTHKEHIREQALQAFHHRATGVLAQPLGAAQAAVLNTLAQQGWSVKTQRREAAAPNGASGDGHIGAGVMIGARLGAANKLGYIAAHSAIVLICLGGLFDGDLIVNAQVWAQKLQPFKGGMTEPERGRLGEGNPAYRAQLFVPEGTRSNAAVVSLNQGMLVQPLPFEVELKKFSVDYYATGMPKRFASDIVIHDARKGVDKAFTVEVNHPVVYDGVTIFQSSFEDGGSSVQLKPLRLDLGTAQSASSVGAAVSAVVGGAPQMLSVPSGDLQLEVTGLRVINVEDVAQAQKSPAADGAASGAGNDVRGVNLAELSKHLGSGAKPVGSKQLVNIGPSVIYKLRDAAGQAREYQNYMAPVKLDGQQVFLFGVRDTPAEGFRYLRVPADDDLSVQGWLRLRQALNDGAMRAEAARRFGHMAAPADRADLQAQLGTSAQRALDLFAGAVPVTGGLPALSDFIEQAVPADQRERTSATLVRILNGALFELLNLSRERAGVAPLSPEHDEARRFMTASVLSLSDAMFYPVPMVLVLEGFVPKQASVFQVTRTPGRNVVYLGCVLLIVGVFAMLYIRERRLWVWLQDDGAGATRVKMALSSTRQTLDTDREFERLQRTVLGNPAQTAAPTASIAPTAP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221585 | Pelomonas sp. Root662 | Isolate | Unclassified |
| 2 | 2643221639 | Pelomonas sp. Root1217 | Isolate | Unclassified |
| 3 | 2643221644 | Rhizobacter sp. Root1221 | Isolate | Unclassified |
| 4 | 2643221646 | Pelomonas sp. Root1237 | Isolate | Unclassified |
| 5 | 2643221654 | Rhizobacter sp. Root404 | Isolate | Unclassified |
| 6 | 2643221656 | Pelomonas sp. Root405 | Isolate | Unclassified |
| 7 | 2643221660 | Methylibium sp. Root1272 | Isolate | Unclassified |
| 8 | 2738541337 | Pelomonas sp. BT06 | Isolate | Unclassified |
| 9 | 2738543013 | Variovorax sp. BT01 | Isolate | Unclassified |
| 10 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 11 | 2842733646 | Variovorax sp. R-72446 | Isolate | Unclassified |
| 12 | 2842747753 | Variovorax sp. R-72060 | Isolate | Unclassified |
| 13 | 2881101125 | Ramlibacter rhizophilus CCTCC AB2015357 | Isolate | Rhizosphere |
| 14 | 2928115317 | Pseudacidovorax sp. 1753 | Isolate | Rhizosphere |
| 15 | 2932422444 | Comamonas sp. 4034 | Isolate | Rhizosphere |
| 16 | 2974320154 | Acidovorax wautersii SORGH_AS 335 | Isolate | Unclassified |
| 17 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 18 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 19 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 20 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 21 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 22 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 23 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 24 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 25 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 26 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 27 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 35 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 36 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 37 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 38 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 39 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 40 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 47 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 48 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 52 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 66 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 68 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 69 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 70 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 71 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 72 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 73 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 74 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 75 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 76 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 77 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 78 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 79 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 80 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 81 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 82 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 83 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 84 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 85 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 86 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 87 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 88 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 89 | 3300042115 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 | Metagenome | Rhizosphere |
| 90 | 3300042120 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 | Metagenome | Rhizosphere |
| 91 | 3300042121 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 | Metagenome | Rhizosphere |
| 92 | 3300042126 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 | Metagenome | Rhizosphere |
| 93 | 3300042127 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 | Metagenome | Rhizosphere |
| 94 | 3300042129 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 | Metagenome | Rhizosphere |
| 95 | 3300042130 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 | Metagenome | Rhizosphere |
| 96 | 3300042144 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 | Metagenome | Rhizosphere |
| 97 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 98 | 3300042532 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 | Metagenome | Rhizosphere |
| 99 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 100 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 101 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 102 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 103 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 104 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 105 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 108 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 109 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 115 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 116 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 118 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 119 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 120 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 121 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 122 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 123 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 126 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 127 | 3300049764 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control | Metagenome | Rhizosphere |
| 128 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 129 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 130 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 131 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 132 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 133 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 134 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.8 |
| Metatranscriptomes | 0 |
| Isolates | 9.2 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 20.11 |
| Nodule | 1.15 |
| Rhizoplane | 2.87 |
| Rhizosphere | 56.9 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 18.97 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10004509 | 3300001979 | Bacteria | 5996 |
| 2 | rootH1_10008097 | 3300003316 | Bacteria | 2954 |
| 3 | rootH1_10028797 | 3300003316 | Bacteria | 6218 |
| 4 | rootL2_10023019 | 3300003322 | Bacteria | 3517 |
| 5 | Ga0055524_1000070 | 3300003775 | Bacteria | 128656 |
| 6 | Ga0055534_1001691 | 3300003784 | Bacteria | 8438 |
| 7 | Ga0055530_10001723 | 3300003791 | Bacteria | 15372 |
| 8 | Ga0055540_1000028 | 3300003792 | Bacteria | 184864 |
| 9 | Ga0055531_10005529 | 3300003794 | Bacteria | 7378 |
| 10 | Ga0065165_1000107 | 3300005262 | Bacteria | 139612 |
| 11 | Ga0068868_100081061 | 3300005338 | Bacteria | 2601 |
| 12 | Ga0070669_100016976 | 3300005353 | Bacteria | 5198 |
| 13 | Ga0070675_100011240 | 3300005354 | Bacteria | 7009 |
| 14 | Ga0070667_100015946 | 3300005367 | Bacteria | 6217 |
| 15 | Ga0070667_100024246 | 3300005367 | Bacteria | 5040 |
| 16 | Ga0070662_100001486 | 3300005457 | Bacteria | 14424 |
| 17 | Ga0070706_100001854 | 3300005467 | Bacteria | 21867 |
| 18 | Ga0070665_100058240 | 3300005548 | Bacteria | 3873 |
| 19 | Ga0068855_100091913 | 3300005563 | Bacteria | 3500 |
| 20 | Ga0068856_100070756 | 3300005614 | Bacteria | 3452 |
| 21 | Ga0075365_10010953 | 3300006038 | Bacteria | 5312 |
| 22 | Ga0075368_10000682 | 3300006042 | Bacteria | 10310 |
| 23 | Ga0075367_10004964 | 3300006178 | Bacteria | 6561 |
| 24 | Ga0075367_10020764 | 3300006178 | Bacteria | 3663 |
| 25 | Ga0075367_10029595 | 3300006178 | Bacteria | 3134 |
| 26 | Ga0075366_10009649 | 3300006195 | Bacteria | 5395 |
| 27 | Ga0075366_10019171 | 3300006195 | Bacteria | 3954 |
| 28 | Ga0075366_10036853 | 3300006195 | Bacteria | 2884 |
| 29 | Ga0075370_10001478 | 3300006353 | Bacteria | 10234 |
| 30 | Ga0075370_10028564 | 3300006353 | Bacteria | 3101 |
| 31 | Ga0079104_1000092 | 3300006946 | Bacteria | 130657 |
| 32 | Ga0105240_10039661 | 3300009093 | Bacteria | 6028 |
| 33 | Ga0114129_10040618 | 3300009147 | Bacteria | 6557 |
| 34 | Ga0105237_10002475 | 3300009545 | Bacteria | 22923 |
| 35 | Ga0105237_10004861 | 3300009545 | Bacteria | 15417 |
| 36 | Ga0105238_10014532 | 3300009551 | Bacteria | 7962 |
| 37 | Ga0105239_10000292 | 3300010375 | Bacteria | 73809 |
| 38 | Ga0182008_10001559 | 3300014497 | Bacteria | 15235 |
| 39 | Ga0213872_10000096 | 3300021361 | Bacteria | 80925 |
| 40 | Ga0213872_10002784 | 3300021361 | Bacteria | 10006 |
| 41 | Ga0209130_1004925 | 3300025284 | Bacteria | 4840 |
| 42 | Ga0209675_1004624 | 3300025291 | Bacteria | 6051 |
| 43 | Ga0209050_1000282 | 3300025298 | Bacteria | 108629 |
| 44 | Ga0209256_1000015 | 3300025299 | Bacteria | 622953 |
| 45 | Ga0209051_1000022 | 3300025303 | Bacteria | 474879 |
| 46 | Ga0209257_1000030 | 3300025304 | Bacteria | 689812 |
| 47 | Ga0207682_10008841 | 3300025893 | Bacteria | 3983 |
| 48 | Ga0207645_10004979 | 3300025907 | Bacteria | 9736 |
| 49 | Ga0207684_10003995 | 3300025910 | Bacteria | 14112 |
| 50 | Ga0207695_10028149 | 3300025913 | Bacteria | 6239 |
| 51 | Ga0207671_10011357 | 3300025914 | Bacteria | 7255 |
| 52 | Ga0207694_10042589 | 3300025924 | Bacteria | 3502 |
| 53 | Ga0207706_10005623 | 3300025933 | Bacteria | 11681 |
| 54 | Ga0207706_10015474 | 3300025933 | Bacteria | 6893 |
| 55 | Ga0207667_10055946 | 3300025949 | Bacteria | 4146 |
| 56 | Ga0207677_10021420 | 3300026023 | Bacteria | 3949 |
| 57 | Ga0207702_10055460 | 3300026078 | Bacteria | 3361 |
| 58 | Ga0207674_10019009 | 3300026116 | Bacteria | 7446 |
| 59 | Ga0209281_1000083 | 3300027111 | Bacteria | 255034 |
| 60 | Ga0209813_10004774 | 3300027866 | Bacteria | 3254 |
| 61 | Ga0207428_10042964 | 3300027907 | Bacteria | 3653 |
| 62 | Ga0307515_10002885 | 3300028794 | Bacteria | 36551 |
| 63 | Ga0307515_10011102 | 3300028794 | Bacteria | 17134 |
| 64 | Ga0307515_10012875 | 3300028794 | Bacteria | 15692 |
| 65 | Ga0307515_10037685 | 3300028794 | Bacteria | 7763 |
| 66 | Ga0307515_10112828 | 3300028794 | Bacteria | 3158 |
| 67 | Ga0307511_10000653 | 3300030521 | Bacteria | 37038 |
| 68 | Ga0265327_10000925 | 3300031251 | Bacteria | 42948 |
| 69 | Ga0265316_10000176 | 3300031344 | Bacteria | 72297 |
| 70 | Ga0307513_10002583 | 3300031456 | Bacteria | 25034 |
| 71 | Ga0307513_10025230 | 3300031456 | Bacteria | 6893 |
| 72 | Ga0307408_100000037 | 3300031548 | Bacteria | 187096 |
| 73 | Ga0307408_100029846 | 3300031548 | Bacteria | 3781 |
| 74 | Ga0307514_10000522 | 3300031649 | Bacteria | 75925 |
| 75 | Ga0307516_10000130 | 3300031730 | Bacteria | 89368 |
| 76 | Ga0307414_10033026 | 3300032004 | Bacteria | 3415 |
| 77 | Ga0307411_10004581 | 3300032005 | Bacteria | 6648 |
| 78 | Ga0373939_0000195 | 3300035114 | Bacteria | 16648 |
| 79 | Ga0373960_0003805 | 3300035121 | Bacteria | 3429 |
| 80 | Ga0373961_0003286 | 3300035241 | Bacteria | 4021 |
| 81 | Ga0373931_0000459 | 3300035691 | Bacteria | 16709 |
| 82 | Ga0395899_0015546 | 3300037312 | Bacteria | 5803 |
| 83 | Ga0395900_0000125 | 3300037418 | Bacteria | 130214 |
| 84 | Ga0395900_0004694 | 3300037418 | Bacteria | 14405 |
| 85 | Ga0395900_0109888 | 3300037418 | Bacteria | 2832 |
| 86 | Ga0395898_0000802 | 3300037466 | Bacteria | 53155 |
| 87 | Ga0395898_0031381 | 3300037466 | Bacteria | 5309 |
| 88 | Ga0395905_0000027 | 3300037471 | Bacteria | 297239 |
| 89 | Ga0395905_0000504 | 3300037471 | Bacteria | 53598 |
| 90 | Ga0395905_0001600 | 3300037471 | Bacteria | 26922 |
| 91 | Ga0395905_0005042 | 3300037471 | Bacteria | 13598 |
| 92 | Ga0395905_0005353 | 3300037471 | Bacteria | 13113 |
| 93 | Ga0395905_0005520 | 3300037471 | Bacteria | 12901 |
| 94 | Ga0395905_0008212 | 3300037471 | Bacteria | 10310 |
| 95 | Ga0395905_0024747 | 3300037471 | Bacteria | 5665 |
| 96 | Ga0395905_0025870 | 3300037471 | Bacteria | 5530 |
| 97 | Ga0395905_0026109 | 3300037471 | Bacteria | 5508 |
| 98 | Ga0395901_0058039 | 3300038443 | Bacteria | 4025 |
| 99 | Ga0436361_1149592 | 3300039447 | Bacteria | 17234 |
| 100 | Ga0436361_1190118 | 3300039447 | Bacteria | 41161 |
| 101 | Ga0439445_0005096 | 3300042004 | Bacteria | 2988 |
| 102 | Ga0450911_000644 | 3300042115 | Bacteria | 10463 |
| 103 | Ga0450917_000422 | 3300042120 | Bacteria | 3197 |
| 104 | Ga0450919_000525 | 3300042121 | Bacteria | 4793 |
| 105 | Ga0450888_000060 | 3300042126 | Bacteria | 8068 |
| 106 | Ga0450890_000918 | 3300042127 | Bacteria | 4257 |
| 107 | Ga0450891_000079 | 3300042129 | Bacteria | 8005 |
| 108 | Ga0450892_000441 | 3300042130 | Bacteria | 4842 |
| 109 | Ga0450889_000124 | 3300042144 | Bacteria | 7592 |
| 110 | Ga0450918_000029 | 3300042531 | Bacteria | 30016 |
| 111 | Ga0450893_0000661 | 3300042532 | Bacteria | 4951 |
| 112 | Ga0450893_0000948 | 3300042532 | Bacteria | 4350 |
| 113 | Ga0466969_0000047 | 3300044656 | Bacteria | 63979 |
| 114 | Ga0466972_0006059 | 3300044658 | Bacteria | 6074 |
| 115 | Ga0466965_0006674 | 3300044683 | Bacteria | 5260 |
| 116 | Ga0466966_0001948 | 3300044684 | Bacteria | 13354 |
| 117 | Ga0466961_0025201 | 3300044693 | Bacteria | 3825 |
| 118 | Ga0466963_0001034 | 3300044694 | Bacteria | 14451 |
| 119 | Ga0466970_0008804 | 3300044765 | Bacteria | 5084 |
| 120 | Ga0466959_0001210 | 3300045049 | Bacteria | 15585 |
| 121 | Ga0466959_0065345 | 3300045049 | Bacteria | 2640 |
| 122 | Ga0451576_0021402 | 3300045051 | Bacteria | 7028 |
| 123 | Ga0466967_0044253 | 3300045976 | Bacteria | 3860 |
| 124 | Ga0495632_0019972 | 3300046519 | Bacteria | 3638 |
| 125 | Ga0495621_0000884 | 3300046539 | Bacteria | 7645 |
| 126 | Ga0495597_0000542 | 3300046542 | Bacteria | 31279 |
| 127 | Ga0495597_0029121 | 3300046542 | Bacteria | 2523 |
| 128 | Ga0495633_0001069 | 3300046558 | Bacteria | 22144 |
| 129 | Ga0495687_001868 | 3300047443 | Bacteria | 18265 |
| 130 | Ga0496102_0009125 | 3300048905 | Bacteria | 8508 |
| 131 | Ga0496103_0010957 | 3300048906 | Bacteria | 5366 |
| 132 | Ga0496109_0026360 | 3300048912 | Bacteria | 5183 |
| 133 | Ga0496114_0006138 | 3300048917 | Bacteria | 9453 |
| 134 | Ga0496115_0028237 | 3300048918 | Bacteria | 4397 |
| 135 | Ga0496121_0035725 | 3300048924 | Bacteria | 4446 |
| 136 | Ga0496121_0039285 | 3300048924 | Bacteria | 4174 |
| 137 | Ga0496124_0002427 | 3300048927 | Bacteria | 24450 |
| 138 | Ga0496125_0002451 | 3300048928 | Bacteria | 24101 |
| 139 | Ga0496125_0019249 | 3300048928 | Bacteria | 6447 |
| 140 | Ga0496125_0025807 | 3300048928 | Bacteria | 5371 |
| 141 | Ga0496126_0011130 | 3300048929 | Bacteria | 9343 |
| 142 | Ga0501034_0085648 | 3300049571 | Bacteria | 3152 |
| 143 | Ga0501043_0130711 | 3300049579 | Bacteria | 1968 |
| 144 | Ga0501198_000012 | 3300049649 | Bacteria | 113529 |
| 145 | Ga0501222_000010 | 3300049662 | Bacteria | 113536 |
| 146 | Ga0501267_000262 | 3300049764 | Bacteria | 3809 |
| 147 | nmdc:mga0k408_1135_c1 | 3300050493 | Bacteria | 14614 |
| 148 | nmdc:mga0k408_17444_c1 | 3300050493 | Bacteria | 4000 |
| 149 | nmdc:mga0k408_18473_c1 | 3300050493 | Bacteria | 3893 |
| 150 | nmdc:mga0k408_2654_c1 | 3300050493 | Bacteria | 9495 |
| 151 | nmdc:mga0k408_669_c1 | 3300050493 | Bacteria | 18779 |
| 152 | nmdc:mga07m45_2226_c1 | 3300050496 | Bacteria | 9061 |
| 153 | nmdc:mga07m45_43699_c1 | 3300050496 | Bacteria | 2513 |
| 154 | Ga0500646_0000152 | 3300053090 | Bacteria | 20363 |
| 155 | Ga0500559_0002632 | 3300053136 | Bacteria | 9158 |
| 156 | Ga0500573_0021700 | 3300053140 | Bacteria | 3683 |
| 157 | Ga0500590_016412 | 3300053148 | Bacteria | 3828 |
| 158 | Ga0500604_0001753 | 3300053151 | Bacteria | 6072 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049579 | Ga0501043_0130711 | Ga0501043_0130711_14_1636 | 537 |
| 2 | 3300005548 | Ga0070665_100058240 | Ga0070665_1000582403 | 658 |
| 3 | 3300053151 | Ga0500604_0001753 | Ga0500604_0001753_1170_3221 | 660 |
| 4 | 3300005457 | Ga0070662_100001486 | Ga0070662_1000014869 | 663 |
| 5 | 3300025933 | Ga0207706_10005623 | Ga0207706_100056233 | 663 |
| 6 | 3300049571 | Ga0501034_0085648 | Ga0501034_0085648_181_2328 | 664 |
| 7 | 3300006353 | Ga0075370_10028564 | Ga0075370_100285642 | 666 |
| 8 | 3300031251 | Ga0265327_10000925 | Ga0265327_1000092531 | 666 |
| 9 | 3300037312 | Ga0395899_0015546 | Ga0395899_0015546_2411_4519 | 667 |
| 10 | 3300037418 | Ga0395900_0109888 | Ga0395900_0109888_690_2798 | 667 |
| 11 | 3300042532 | Ga0450893_0000661 | Ga0450893_0000661_2506_4626 | 667 |
| 12 | iso_pu_bacteria | 2842747753 | 2842748952 | 670 |
| 13 | 3300053136 | Ga0500559_0002632 | Ga0500559_0002632_5056_7137 | 671 |
| 14 | 3300053140 | Ga0500573_0021700 | Ga0500573_0021700_686_2767 | 671 |
| 15 | 3300005614 | Ga0068856_100070756 | Ga0068856_1000707562 | 674 |
| 16 | 3300026078 | Ga0207702_10055460 | Ga0207702_100554602 | 674 |
| 17 | 3300030521 | Ga0307511_10000653 | Ga0307511_1000065344 | 675 |
| 18 | 3300053090 | Ga0500646_0000152 | Ga0500646_0000152_14422_16518 | 675 |
| 19 | 3300037471 | Ga0395905_0005520 | Ga0395905_0005520_4817_6862 | 677 |
| 20 | iso_pu_bacteria | 2842733646 | 2842736444 | 677 |
| 21 | 3300031548 | Ga0307408_100029846 | Ga0307408_1000298462 | 679 |
| 22 | 3300046558 | Ga0495633_0001069 | Ga0495633_0001069_3877_5946 | 679 |
| 23 | 3300048928 | Ga0496125_0002451 | Ga0496125_0002451_17171_19267 | 680 |
| 24 | 3300048929 | Ga0496126_0011130 | Ga0496126_0011130_4957_7053 | 680 |
| 25 | 3300049764 | Ga0501267_000262 | Ga0501267_000262_1371_3464 | 680 |
| 26 | 3300031456 | Ga0307513_10002583 | Ga0307513_1000258325 | 682 |
| 27 | 3300046542 | Ga0495597_0029121 | Ga0495597_0029121_110_2278 | 682 |
| 28 | 3300047443 | Ga0495687_001868 | Ga0495687_001868_5527_7686 | 682 |
| 29 | 3300042115 | Ga0450911_000644 | Ga0450911_000644_7513_9639 | 683 |
| 30 | 3300048928 | Ga0496125_0019249 | Ga0496125_0019249_1031_3157 | 683 |
| 31 | iso_pu_bacteria | 2643221639 | 2644218303 | 683 |
| 32 | 3300005367 | Ga0070667_100024246 | Ga0070667_1000242464 | 684 |
| 33 | 3300006178 | Ga0075367_10004964 | Ga0075367_100049645 | 684 |
| 34 | 3300009545 | Ga0105237_10004861 | Ga0105237_100048618 | 684 |
| 35 | 3300025933 | Ga0207706_10015474 | Ga0207706_100154745 | 684 |
| 36 | iso_pu_bacteria | 2738541337 | 2739056150 | 684 |
| 37 | 3300042004 | Ga0439445_0005096 | Ga0439445_0005096_241_2367 | 685 |
| 38 | 3300048905 | Ga0496102_0009125 | Ga0496102_0009125_3118_5265 | 685 |
| 39 | 3300048906 | Ga0496103_0010957 | Ga0496103_0010957_2193_4340 | 685 |
| 40 | iso_pu_bacteria | 2643221646 | 2644260192 | 685 |
| 41 | 3300014497 | Ga0182008_10001559 | Ga0182008_100015593 | 686 |
| 42 | 3300003316 | rootH1_10028797 | rootH1_100287974 | 687 |
| 43 | 3300003322 | rootL2_10023019 | rootL2_100230193 | 687 |
| 44 | 3300031548 | Ga0307408_100000037 | Ga0307408_100000037123 | 687 |
| 45 | 3300045051 | Ga0451576_0021402 | Ga0451576_0021402_694_2769 | 687 |
| 46 | iso_pu_bacteria | 2643221585 | 2643932698 | 687 |
| 47 | iso_pu_bacteria | 2643221656 | 2644313948 | 687 |
| 48 | 3300032004 | Ga0307414_10033026 | Ga0307414_100330263 | 688 |
| 49 | 3300032005 | Ga0307411_10004581 | Ga0307411_100045814 | 688 |
| 50 | 3300035114 | Ga0373939_0000195 | Ga0373939_0000195_10492_12573 | 688 |
| 51 | 3300035121 | Ga0373960_0003805 | Ga0373960_0003805_853_2934 | 688 |
| 52 | 3300035241 | Ga0373961_0003286 | Ga0373961_0003286_591_2672 | 688 |
| 53 | 3300035691 | Ga0373931_0000459 | Ga0373931_0000459_10221_12302 | 688 |
| 54 | 3300037471 | Ga0395905_0005353 | Ga0395905_0005353_9188_11266 | 688 |
| 55 | 3300042120 | Ga0450917_000422 | Ga0450917_000422_651_2744 | 688 |
| 56 | 3300042126 | Ga0450888_000060 | Ga0450888_000060_2276_4369 | 688 |
| 57 | 3300042127 | Ga0450890_000918 | Ga0450890_000918_381_2474 | 688 |
| 58 | 3300042129 | Ga0450891_000079 | Ga0450891_000079_5124_7217 | 688 |
| 59 | 3300042130 | Ga0450892_000441 | Ga0450892_000441_2637_4730 | 688 |
| 60 | 3300042144 | Ga0450889_000124 | Ga0450889_000124_5019_7112 | 688 |
| 61 | 3300042532 | Ga0450893_0000948 | Ga0450893_0000948_113_2206 | 688 |
| 62 | 3300048924 | Ga0496121_0039285 | Ga0496121_0039285_584_2707 | 688 |
| 63 | 3300005353 | Ga0070669_100016976 | Ga0070669_1000169762 | 689 |
| 64 | 3300028794 | Ga0307515_10037685 | Ga0307515_100376855 | 689 |
| 65 | 3300028794 | Ga0307515_10112828 | Ga0307515_101128282 | 689 |
| 66 | 3300048918 | Ga0496115_0028237 | Ga0496115_0028237_614_2701 | 690 |
| 67 | 3300003784 | Ga0055534_1001691 | Ga0055534_10016915 | 692 |
| 68 | 3300025284 | Ga0209130_1004925 | Ga0209130_10049252 | 692 |
| 69 | 3300025291 | Ga0209675_1004624 | Ga0209675_10046246 | 692 |
| 70 | 3300042121 | Ga0450919_000525 | Ga0450919_000525_1273_3393 | 692 |
| 71 | 3300042531 | Ga0450918_000029 | Ga0450918_000029_4107_6227 | 692 |
| 72 | 3300046542 | Ga0495597_0000542 | Ga0495597_0000542_7968_10145 | 692 |
| 73 | 3300031344 | Ga0265316_10000176 | Ga0265316_1000017649 | 694 |
| 74 | 3300048912 | Ga0496109_0026360 | Ga0496109_0026360_2494_4749 | 696 |
| 75 | iso_pu_bacteria | 2974320154 | 2974322328 | 696 |
| 76 | 3300044658 | Ga0466972_0006059 | Ga0466972_0006059_1794_3932 | 698 |
| 77 | 3300048924 | Ga0496121_0035725 | Ga0496121_0035725_1091_3217 | 698 |
| 78 | 3300048928 | Ga0496125_0025807 | Ga0496125_0025807_603_2729 | 698 |
| 79 | iso_pu_bacteria | 2842718218 | 2842721587 | 698 |
| 80 | iso_pu_bacteria | 2932422444 | 2932423936 | 698 |
| 81 | 3300048917 | Ga0496114_0006138 | Ga0496114_0006138_4867_7008 | 699 |
| 82 | iso_pu_bacteria | 2738543013 | 2739250162 | 699 |
| 83 | iso_pu_bacteria | 2881101125 | 2881103370 | 699 |
| 84 | 3300021361 | Ga0213872_10000096 | Ga0213872_1000009662 | 700 |
| 85 | 3300028794 | Ga0307515_10012875 | Ga0307515_1001287512 | 700 |
| 86 | 3300037471 | Ga0395905_0000027 | Ga0395905_0000027_86008_88119 | 700 |
| 87 | 3300039447 | Ga0436361_1190118 | Ga0436361_1190118_33978_36122 | 700 |
| 88 | iso_pu_bacteria | 2928115317 | 2928118068 | 700 |
| 89 | 3300021361 | Ga0213872_10002784 | Ga0213872_100027844 | 701 |
| 90 | 3300037471 | Ga0395905_0008212 | Ga0395905_0008212_935_3058 | 701 |
| 91 | 3300037471 | Ga0395905_0025870 | Ga0395905_0025870_2262_4382 | 701 |
| 92 | 3300037471 | Ga0395905_0026109 | Ga0395905_0026109_1850_3961 | 701 |
| 93 | 3300039447 | Ga0436361_1149592 | Ga0436361_1149592_10603_12804 | 701 |
| 94 | 3300044684 | Ga0466966_0001948 | Ga0466966_0001948_5950_8070 | 701 |
| 95 | 3300044765 | Ga0466970_0008804 | Ga0466970_0008804_1816_3936 | 701 |
| 96 | iso_pu_bacteria | 2643221660 | 2644340791 | 701 |
| 97 | 3300005367 | Ga0070667_100015946 | Ga0070667_1000159461 | 702 |
| 98 | 3300031456 | Ga0307513_10025230 | Ga0307513_100252305 | 702 |
| 99 | 3300031730 | Ga0307516_10000130 | Ga0307516_1000013034 | 702 |
| 100 | 3300037418 | Ga0395900_0000125 | Ga0395900_0000125_64712_66862 | 702 |
| 101 | 3300037466 | Ga0395898_0000802 | Ga0395898_0000802_37513_39663 | 702 |
| 102 | 3300045049 | Ga0466959_0065345 | Ga0466959_0065345_55_2172 | 702 |
| 103 | iso_pu_bacteria | 2643221644 | 2644244073 | 702 |
| 104 | iso_pu_bacteria | 2643221654 | 2644301244 | 702 |
| 105 | 3300005262 | Ga0065165_1000107 | Ga0065165_100010776 | 703 |
| 106 | 3300005338 | Ga0068868_100081061 | Ga0068868_1000810611 | 703 |
| 107 | 3300005354 | Ga0070675_100011240 | Ga0070675_1000112406 | 703 |
| 108 | 3300006353 | Ga0075370_10001478 | Ga0075370_100014783 | 703 |
| 109 | 3300009147 | Ga0114129_10040618 | Ga0114129_100406182 | 703 |
| 110 | 3300025907 | Ga0207645_10004979 | Ga0207645_1000497910 | 703 |
| 111 | 3300026023 | Ga0207677_10021420 | Ga0207677_100214202 | 703 |
| 112 | 3300026116 | Ga0207674_10019009 | Ga0207674_100190094 | 703 |
| 113 | 3300027907 | Ga0207428_10042964 | Ga0207428_100429642 | 703 |
| 114 | 3300031649 | Ga0307514_10000522 | Ga0307514_1000052250 | 703 |
| 115 | 3300037418 | Ga0395900_0004694 | Ga0395900_0004694_9074_11194 | 703 |
| 116 | 3300037466 | Ga0395898_0031381 | Ga0395898_0031381_379_2499 | 703 |
| 117 | 3300037471 | Ga0395905_0000504 | Ga0395905_0000504_48269_50455 | 703 |
| 118 | 3300037471 | Ga0395905_0001600 | Ga0395905_0001600_4931_7054 | 703 |
| 119 | 3300037471 | Ga0395905_0005042 | Ga0395905_0005042_2335_4455 | 703 |
| 120 | 3300038443 | Ga0395901_0058039 | Ga0395901_0058039_1745_3865 | 703 |
| 121 | 3300050493 | nmdc:mga0k408_17444_c1 | nmdc:mga0k408_17444_c1_391_2538 | 703 |
| 122 | 3300050496 | nmdc:mga07m45_2226_c1 | nmdc:mga07m45_2226_c1_5132_7288 | 703 |
| 123 | 3300037471 | Ga0395905_0024747 | Ga0395905_0024747_1989_4142 | 704 |
| 124 | 3300044656 | Ga0466969_0000047 | Ga0466969_0000047_6230_8347 | 704 |
| 125 | 3300044693 | Ga0466961_0025201 | Ga0466961_0025201_670_2787 | 704 |
| 126 | 3300048927 | Ga0496124_0002427 | Ga0496124_0002427_2186_4309 | 704 |
| 127 | 3300053148 | Ga0500590_016412 | Ga0500590_016412_1225_3339 | 704 |
| 128 | 3300028794 | Ga0307515_10002885 | Ga0307515_1000288524 | 705 |
| 129 | 3300044683 | Ga0466965_0006674 | Ga0466965_0006674_1966_4137 | 706 |
| 130 | 3300044694 | Ga0466963_0001034 | Ga0466963_0001034_6196_8367 | 706 |
| 131 | 3300045049 | Ga0466959_0001210 | Ga0466959_0001210_4705_6876 | 706 |
| 132 | 3300045976 | Ga0466967_0044253 | Ga0466967_0044253_789_2960 | 706 |
| 133 | 3300049649 | Ga0501198_000012 | Ga0501198_000012_18444_20648 | 707 |
| 134 | 3300049662 | Ga0501222_000010 | Ga0501222_000010_18450_20654 | 707 |
| 135 | 3300025893 | Ga0207682_10008841 | Ga0207682_100088412 | 708 |
| 136 | 3300028794 | Ga0307515_10011102 | Ga0307515_100111027 | 708 |
| 137 | 3300046539 | Ga0495621_0000884 | Ga0495621_0000884_2421_4580 | 708 |
| 138 | 3300003316 | rootH1_10008097 | rootH1_100080972 | 709 |
| 139 | 3300003775 | Ga0055524_1000070 | Ga0055524_10000706 | 710 |
| 140 | 3300003791 | Ga0055530_10001723 | Ga0055530_100017236 | 710 |
| 141 | 3300003792 | Ga0055540_1000028 | Ga0055540_10000286 | 710 |
| 142 | 3300003794 | Ga0055531_10005529 | Ga0055531_100055295 | 710 |
| 143 | 3300005467 | Ga0070706_100001854 | Ga0070706_1000018548 | 710 |
| 144 | 3300006178 | Ga0075367_10020764 | Ga0075367_100207642 | 710 |
| 145 | 3300006195 | Ga0075366_10036853 | Ga0075366_100368532 | 710 |
| 146 | 3300006946 | Ga0079104_1000092 | Ga0079104_100009290 | 710 |
| 147 | 3300025298 | Ga0209050_1000282 | Ga0209050_100028294 | 710 |
| 148 | 3300025299 | Ga0209256_1000015 | Ga0209256_1000015181 | 710 |
| 149 | 3300025303 | Ga0209051_1000022 | Ga0209051_1000022271 | 710 |
| 150 | 3300025304 | Ga0209257_1000030 | Ga0209257_1000030469 | 710 |
| 151 | 3300025910 | Ga0207684_10003995 | Ga0207684_100039959 | 710 |
| 152 | 3300027111 | Ga0209281_1000083 | Ga0209281_1000083186 | 710 |
| 153 | 3300050493 | nmdc:mga0k408_669_c1 | nmdc:mga0k408_669_c1_14374_16533 | 710 |
| 154 | 3300006038 | Ga0075365_10010953 | Ga0075365_100109534 | 711 |
| 155 | 3300006042 | Ga0075368_10000682 | Ga0075368_100006822 | 711 |
| 156 | 3300006178 | Ga0075367_10029595 | Ga0075367_100295952 | 711 |
| 157 | 3300009093 | Ga0105240_10039661 | Ga0105240_100396615 | 711 |
| 158 | 3300009545 | Ga0105237_10002475 | Ga0105237_1000247525 | 711 |
| 159 | 3300009551 | Ga0105238_10014532 | Ga0105238_100145326 | 711 |
| 160 | 3300010375 | Ga0105239_10000292 | Ga0105239_100002926 | 711 |
| 161 | 3300025913 | Ga0207695_10028149 | Ga0207695_100281494 | 711 |
| 162 | 3300025914 | Ga0207671_10011357 | Ga0207671_100113575 | 711 |
| 163 | 3300025924 | Ga0207694_10042589 | Ga0207694_100425892 | 711 |
| 164 | 3300027866 | Ga0209813_10004774 | Ga0209813_100047743 | 711 |
| 165 | 3300050493 | nmdc:mga0k408_2654_c1 | nmdc:mga0k408_2654_c1_1769_3925 | 711 |
| 166 | 3300050496 | nmdc:mga07m45_43699_c1 | nmdc:mga07m45_43699_c1_204_2360 | 711 |
| 167 | 3300006195 | Ga0075366_10009649 | Ga0075366_100096494 | 712 |
| 168 | 3300006195 | Ga0075366_10019171 | Ga0075366_100191712 | 712 |
| 169 | 3300046519 | Ga0495632_0019972 | Ga0495632_0019972_110_2293 | 712 |
| 170 | 3300050493 | nmdc:mga0k408_1135_c1 | nmdc:mga0k408_1135_c1_11661_13832 | 712 |
| 171 | 3300050493 | nmdc:mga0k408_18473_c1 | nmdc:mga0k408_18473_c1_722_2905 | 712 |
| 172 | 3300001979 | JGI24740J21852_10004509 | JGI24740J21852_100045093 | 720 |
| 173 | 3300005563 | Ga0068855_100091913 | Ga0068855_1000919132 | 720 |
| 174 | 3300025949 | Ga0207667_10055946 | Ga0207667_100559462 | 720 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1avg-assembly1.cif.gz_I | thrombin inhibitor from triatoma pallidipennis | 0.6298 | 432 | 478 |
| 3p51-assembly1.cif.gz_A | three-dimensional structure of protein q2y8n9_nitmu from nitrosospira multiformis, northeast structural genomics consortium target nmr118 | 0.5958 | 673 | 717 |
| 1vpr-assembly1.cif.gz_A | crystal structure of a luciferase domain from the dinoflagellate lingulodinium polyedrum | 0.5098 | 312 | 476 |
| 7elm-assembly1.cif.gz_U | structure of csy-acrif24 | 0.4897 | 445 | 478 |
| 4dx9-assembly12.cif.gz_W | icap1 in complex with integrin beta 1 cytoplasmic tail | 0.4564 | 673 | 718 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q21291_138_432_3.90.190.10 | Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily | 0.7218 | 265 | 309 | 3.90.190.10 |
| af_Q552D2_1_274_2.70.98.40 | Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5;Glycoside hydrolase, family 65, N-terminal domain | 0.6776 | 432 | 467 | 2.70.98.40 |
| 1lrzA01 | Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) | 0.6605 | 145 | 174 | 3.40.630.30 |
| 1avgI00 | Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain | 0.6298 | 432 | 478 | 2.40.128.20 |
| 3p51A00 | Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain | 0.5958 | 673 | 717 | 3.30.530.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A365VR94-F1-model_v4 | deleted | 0.941 | 454 | 636 |
|
| AF-A0A365VR94-F1-model_v4 | deleted | 0.9168 | 454 | 636 |
|
| AF-A0A520BKS2-F1-model_v4 | Cytochrome c biogenesis protein ResB | 0.9105 | 27 | 717 |
GO:0016020
GO:0017004 |
| AF-A0A7Y7HSE2-F1-model_v4 | Cytochrome c biogenesis protein | 0.9093 | 2 | 714 |
GO:0016020
GO:0017004 |
| AF-A0A520BKS2-F1-model_v4 | Cytochrome c biogenesis protein ResB | 0.9066 | 27 | 717 |
GO:0016020
GO:0017004 |
Predicted Structure (AlphaFold2)
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