F264737

General Info

Members Datasets Scaffolds Average Seq Length
174 116 348 214

Family's Representative Sequence

Representative Sequence 3300026121|Ga0207683_10684248|Ga0207683_106842481
Length 256
Sequence MPSKSRQIRRSPAQLYWRHGLGRSIVKPDSSASAFAASILLAPCTALDRATLLRGVTELAARDAVLGDIVTRLGPPPLWGRRPGFATLVRIVLEQQVSLASAAAVYARLQQRLGGTVTAEGVQAFGTRGLRANGFTRQKARYVHGLATSIVDGEFSLTRIARLTDEAALEALDAAPGVGPWTAGIYMLMALRRPDVWPPGDLGLHKSIAETHKLTSVPSSAQASEFALRWRPWRAVAARLLWHSYLHVRNRSGAWQ

Samples

Sample ID Description Type Environment
1 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
87 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
93 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
106 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
111 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.72
Rhizosphere 97.7
Stem 0
Stem Tuber 0
Unclassified 20.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207683_10684248 3300026121 Unclassified 951
2 Ga0065704_10002002 3300005289 Bacteria 8688
3 Ga0065704_10154851 3300005289 Bacteria 1399
4 Ga0070690_100002511 3300005330 Bacteria 9870
5 Ga0070670_100002476 3300005331 Bacteria 15232
6 Ga0070670_100280354 3300005331 Bacteria 1455
7 Ga0070670_100284083 3300005331 Unclassified 1445
8 Ga0068869_100047026 3300005334 Unclassified 3114
9 Ga0068869_100218070 3300005334 Bacteria 1511
10 Ga0070682_100000081 3300005337 Bacteria 85485
11 Ga0068868_100104923 3300005338 Bacteria 2291
12 Ga0068868_100481822 3300005338 Bacteria 1084
13 Ga0070692_10092440 3300005345 Bacteria 1646
14 Ga0070668_100008593 3300005347 Bacteria 7585
15 Ga0070669_100049731 3300005353 Bacteria 3061
16 Ga0070669_100061563 3300005353 Bacteria 2758
17 Ga0070675_100060147 3300005354 Bacteria 3136
18 Ga0070671_100433026 3300005355 Bacteria 1127
19 Ga0070673_100030449 3300005364 Bacteria 4039
20 Ga0070659_100291984 3300005366 Bacteria 1358
21 Ga0070700_100412741 3300005441 Bacteria 1018
22 Ga0070694_100094168 3300005444 Bacteria 2107
23 Ga0070694_100191940 3300005444 Bacteria 1517
24 Ga0070694_100433617 3300005444 Unclassified 1035
25 Ga0070706_100259411 3300005467 Bacteria 1622
26 Ga0070698_100002443 3300005471 Bacteria 20482
27 Ga0070698_100022311 3300005471 Bacteria 6622
28 Ga0070699_100016043 3300005518 Bacteria 6432
29 Ga0070697_100000074 3300005536 Bacteria 79648
30 Ga0070686_100118023 3300005544 Bacteria 1818
31 Ga0070686_100321621 3300005544 Unclassified 1153
32 Ga0070695_100977571 3300005545 Unclassified 687
33 Ga0070696_100040348 3300005546 Unclassified 3223
34 Ga0070696_100621808 3300005546 Bacteria 873
35 Ga0070696_100635962 3300005546 Unclassified 863
36 Ga0070704_100294750 3300005549 Bacteria 1349
37 Ga0070704_100431915 3300005549 Bacteria 1130
38 Ga0070664_100092860 3300005564 Bacteria 2614
39 Ga0068859_100207099 3300005617 Bacteria 2047
40 Ga0068859_100884167 3300005617 Unclassified 979
41 Ga0068864_100719903 3300005618 Unclassified 976
42 Ga0068864_101027837 3300005618 Bacteria 818
43 Ga0068861_100015564 3300005719 Bacteria 5363
44 Ga0068860_100149517 3300005843 Bacteria 2248
45 Ga0068860_100407813 3300005843 Unclassified 1345
46 Ga0068862_101191525 3300005844 Unclassified 760
47 Ga0075428_100016164 3300006844 Bacteria 8249
48 Ga0075430_100051697 3300006846 Bacteria 3462
49 Ga0075431_100118993 3300006847 Bacteria 2725
50 Ga0075431_100133505 3300006847 Bacteria 2559
51 Ga0075429_100025791 3300006880 Bacteria 5103
52 Ga0075429_100078195 3300006880 Bacteria 2883
53 Ga0068865_100901792 3300006881 Unclassified 769
54 Ga0097620_100207082 3300006931 Bacteria 2047
55 Ga0097620_100884217 3300006931 Unclassified 979
56 Ga0111539_10001224 3300009094 Bacteria 34188
57 Ga0111539_10002574 3300009094 Bacteria 24010
58 Ga0111539_10002879 3300009094 Bacteria 22846
59 Ga0111539_10010291 3300009094 Bacteria 11776
60 Ga0111539_10293961 3300009094 Unclassified 1890
61 Ga0111539_10629910 3300009094 Bacteria 1249
62 Ga0114129_10043502 3300009147 Bacteria 6318
63 Ga0105243_10108014 3300009148 Bacteria 2322
64 Ga0105243_10417244 3300009148 Unclassified 1251
65 Ga0105242_10004932 3300009176 Bacteria 10333
66 Ga0105248_10903044 3300009177 Bacteria 997
67 Ga0105249_10000025 3300009553 Bacteria 232713
68 Ga0105249_10495436 3300009553 Bacteria 1266
69 Ga0105239_10798615 3300010375 Unclassified 1081
70 Ga0105246_10232658 3300011119 Bacteria 1452
71 Ga0157378_10161472 3300013297 Bacteria 2096
72 Ga0157378_10660444 3300013297 Unclassified 1062
73 Ga0157378_10798647 3300013297 Bacteria 969
74 Ga0163162_10000002 3300013306 Bacteria 717331
75 Ga0163162_10039405 3300013306 Bacteria 4721
76 Ga0163162_10892358 3300013306 Bacteria 1003
77 Ga0157375_12064691 3300013308 Unclassified 678
78 Ga0163163_10126092 3300014325 Bacteria 2598
79 Ga0163163_10592864 3300014325 Bacteria 1171
80 Ga0163163_10745408 3300014325 Archaea 1043
81 Ga0157380_10059130 3300014326 Bacteria 3058
82 Ga0157377_10064942 3300014745 Bacteria 2095
83 Ga0207684_10358787 3300025910 Unclassified 1254
84 Ga0207662_10063195 3300025918 Bacteria 2226
85 Ga0207681_10003149 3300025923 Bacteria 10370
86 Ga0207681_10101646 3300025923 Bacteria 2074
87 Ga0207681_10344966 3300025923 Unclassified 1191
88 Ga0207650_10001034 3300025925 Bacteria 20873
89 Ga0207650_10244779 3300025925 Bacteria 1450
90 Ga0207650_10263386 3300025925 Unclassified 1399
91 Ga0207659_10028110 3300025926 Bacteria 3818
92 Ga0207644_10461566 3300025931 Bacteria 1044
93 Ga0207690_10251793 3300025932 Unclassified 1365
94 Ga0207686_10000791 3300025934 Bacteria 19439
95 Ga0207686_10506410 3300025934 Bacteria 938
96 Ga0207670_10032533 3300025936 Bacteria 3354
97 Ga0207704_10114078 3300025938 Unclassified 1834
98 Ga0207691_10319760 3300025940 Bacteria 1331
99 Ga0207689_10019472 3300025942 Bacteria 5719
100 Ga0207689_10090451 3300025942 Bacteria 2515
101 Ga0207679_10257854 3300025945 Unclassified 1486
102 Ga0207679_10292419 3300025945 Bacteria 1401
103 Ga0207651_10024607 3300025960 Bacteria 3728
104 Ga0207651_10330837 3300025960 Unclassified 1277
105 Ga0207712_10008506 3300025961 Bacteria 6487
106 Ga0207640_10860653 3300025981 Unclassified 789
107 Ga0207708_10227532 3300026075 Bacteria 1496
108 Ga0207708_10267477 3300026075 Bacteria 1382
109 Ga0207641_10896315 3300026088 Unclassified 880
110 Ga0207648_10570983 3300026089 Bacteria 1040
111 Ga0207676_10103437 3300026095 Bacteria 2367
112 Ga0207674_10146515 3300026116 Bacteria 2320
113 Ga0207675_101267819 3300026118 Bacteria 757
114 Ga0209974_10058962 3300027876 Bacteria 1298
115 Ga0207428_10000546 3300027907 Bacteria 44847
116 Ga0207428_10019713 3300027907 Bacteria 5747
117 Ga0207428_10109080 3300027907 Bacteria 2131
118 Ga0207428_10455161 3300027907 Bacteria 933
119 Ga0268264_10155973 3300028381 Bacteria 2052
120 Ga0316579_10258406 3300031691 Bacteria 842
121 Ga0316576_10132438 3300031727 Bacteria 1876
122 Ga0316578_10001716 3300031728 Bacteria 9147
123 Ga0307413_10038437 3300031824 Bacteria 2774
124 Ga0307409_100251497 3300031995 Bacteria 1616
125 Ga0307416_100553742 3300032002 Bacteria 1224
126 Ga0307414_10547562 3300032004 Bacteria 1031
127 Ga0307411_10156128 3300032005 Bacteria 1702
128 Ga0373935_0067425 3300035692 Bacteria 2301
129 Ga0316582_0116130 3300036647 Bacteria 1786
130 Ga0400485_10407 3300038735 Bacteria 2682
131 Ga0439435_0064827 3300042436 Unclassified 1071
132 Ga0451577_0014537 3300042876 Bacteria 7335
133 Ga0451577_0027508 3300042876 Bacteria 5148
134 Ga0451577_0433266 3300042876 Unclassified 1194
135 Ga0453684_0009355 3300044712 Bacteria 17175
136 Ga0451576_0756374 3300045051 Bacteria 1021
137 Ga0451576_0821071 3300045051 Bacteria 976
138 Ga0495603_0382370 3300046455 Archaea 807
139 Ga0495663_0000305 3300046525 Bacteria 18438
140 Ga0495621_0000082 3300046539 Bacteria 19369
141 Ga0496102_0405187 3300048905 Unclassified 1282
142 Ga0496114_0045380 3300048917 Bacteria 3651
143 Ga0496115_0069937 3300048918 Bacteria 2844
144 Ga0501038_0087413 3300049574 Bacteria 2618
145 Ga0501042_0024246 3300049578 Bacteria 4254
146 Ga0501046_0035406 3300049580 Bacteria 4024
147 Ga0501068_0485443 3300049584 Bacteria 801
148 Ga0501071_0101699 3300049587 Bacteria 2119
149 Ga0501076_0564468 3300049592 Bacteria 939
150 Ga0501079_0043141 3300049741 Bacteria 3481
151 Ga0501080_0072132 3300049742 Bacteria 3213
152 Ga0501081_0034701 3300049743 Bacteria 3433
153 Ga0501283_001096 3300049779 Bacteria 3571
154 Ga0501045_0613996 3300049824 Unclassified 805
155 nmdc:mga05p37_1135230_c1 3300050507 Unclassified 815
156 nmdc:mga05p37_19861_c1 3300050507 Bacteria 8129
157 nmdc:mga05p37_59877_c1 3300050507 Bacteria 4689
158 nmdc:mga09592_116418_c1 3300050508 Bacteria 2294
159 nmdc:mga09592_25588_c1 3300050508 Bacteria 4886
160 nmdc:mga09592_466659_c1 3300050508 Unclassified 1088
161 nmdc:mga0qj67_5174_c1 3300050509 Bacteria 9517
162 nmdc:mga0qj67_88200_c1 3300050509 Bacteria 2491
163 nmdc:mga06r32_159601_c1 3300050510 Bacteria 2237
164 nmdc:mga06r32_255687_c1 3300050510 Bacteria 1739
165 nmdc:mga08y16_106403_c1 3300050511 Bacteria 2920
166 nmdc:mga08y16_211059_c1 3300050511 Unclassified 2011
167 nmdc:mga08y16_2111_c1 3300050511 Bacteria 20382
168 nmdc:mga08y16_2835_c1 3300050511 Bacteria 17814
169 nmdc:mga0a205_344881_c1 3300050515 Bacteria 1357
170 Ga0501084_0230747 3300054114 Bacteria 1562
171 Ga0501082_0144978 3300060353 Bacteria 2061
172 Ga0501082_0160530 3300060353 Bacteria 1953
173 Ga0501082_1294597 3300060353 Unclassified 637
174 Ga0530510_0130139 3300061734 Bacteria 1851
175 Ga0207683_10684248
176 Ga0065704_10002002
177 Ga0065704_10154851
178 Ga0070690_100002511
179 Ga0070670_100002476
180 Ga0070670_100280354
181 Ga0070670_100284083
182 Ga0068869_100047026
183 Ga0068869_100218070
184 Ga0070682_100000081
185 Ga0068868_100104923
186 Ga0068868_100481822
187 Ga0070692_10092440
188 Ga0070668_100008593
189 Ga0070669_100049731
190 Ga0070669_100061563
191 Ga0070675_100060147
192 Ga0070671_100433026
193 Ga0070673_100030449
194 Ga0070659_100291984
195 Ga0070700_100412741
196 Ga0070694_100094168
197 Ga0070694_100191940
198 Ga0070694_100433617
199 Ga0070706_100259411
200 Ga0070698_100002443
201 Ga0070698_100022311
202 Ga0070699_100016043
203 Ga0070697_100000074
204 Ga0070686_100118023
205 Ga0070686_100321621
206 Ga0070695_100977571
207 Ga0070696_100040348
208 Ga0070696_100621808
209 Ga0070696_100635962
210 Ga0070704_100294750
211 Ga0070704_100431915
212 Ga0070664_100092860
213 Ga0068859_100207099
214 Ga0068859_100884167
215 Ga0068864_100719903
216 Ga0068864_101027837
217 Ga0068861_100015564
218 Ga0068860_100149517
219 Ga0068860_100407813
220 Ga0068862_101191525
221 Ga0075428_100016164
222 Ga0075430_100051697
223 Ga0075431_100118993
224 Ga0075431_100133505
225 Ga0075429_100025791
226 Ga0075429_100078195
227 Ga0068865_100901792
228 Ga0097620_100207082
229 Ga0097620_100884217
230 Ga0111539_10001224
231 Ga0111539_10002574
232 Ga0111539_10002879
233 Ga0111539_10010291
234 Ga0111539_10293961
235 Ga0111539_10629910
236 Ga0114129_10043502
237 Ga0105243_10108014
238 Ga0105243_10417244
239 Ga0105242_10004932
240 Ga0105248_10903044
241 Ga0105249_10000025
242 Ga0105249_10495436
243 Ga0105239_10798615
244 Ga0105246_10232658
245 Ga0157378_10161472
246 Ga0157378_10660444
247 Ga0157378_10798647
248 Ga0163162_10000002
249 Ga0163162_10039405
250 Ga0163162_10892358
251 Ga0157375_12064691
252 Ga0163163_10126092
253 Ga0163163_10592864
254 Ga0163163_10745408
255 Ga0157380_10059130
256 Ga0157377_10064942
257 Ga0207684_10358787
258 Ga0207662_10063195
259 Ga0207681_10003149
260 Ga0207681_10101646
261 Ga0207681_10344966
262 Ga0207650_10001034
263 Ga0207650_10244779
264 Ga0207650_10263386
265 Ga0207659_10028110
266 Ga0207644_10461566
267 Ga0207690_10251793
268 Ga0207686_10000791
269 Ga0207686_10506410
270 Ga0207670_10032533
271 Ga0207704_10114078
272 Ga0207691_10319760
273 Ga0207689_10019472
274 Ga0207689_10090451
275 Ga0207679_10257854
276 Ga0207679_10292419
277 Ga0207651_10024607
278 Ga0207651_10330837
279 Ga0207712_10008506
280 Ga0207640_10860653
281 Ga0207708_10227532
282 Ga0207708_10267477
283 Ga0207641_10896315
284 Ga0207648_10570983
285 Ga0207676_10103437
286 Ga0207674_10146515
287 Ga0207675_101267819
288 Ga0209974_10058962
289 Ga0207428_10000546
290 Ga0207428_10019713
291 Ga0207428_10109080
292 Ga0207428_10455161
293 Ga0268264_10155973
294 Ga0316579_10258406
295 Ga0316576_10132438
296 Ga0316578_10001716
297 Ga0307413_10038437
298 Ga0307409_100251497
299 Ga0307416_100553742
300 Ga0307414_10547562
301 Ga0307411_10156128
302 Ga0373935_0067425
303 Ga0316582_0116130
304 Ga0400485_10407
305 Ga0439435_0064827
306 Ga0451577_0014537
307 Ga0451577_0027508
308 Ga0451577_0433266
309 Ga0453684_0009355
310 Ga0451576_0756374
311 Ga0451576_0821071
312 Ga0495603_0382370
313 Ga0495663_0000305
314 Ga0495621_0000082
315 Ga0496102_0405187
316 Ga0496114_0045380
317 Ga0496115_0069937
318 Ga0501038_0087413
319 Ga0501042_0024246
320 Ga0501046_0035406
321 Ga0501068_0485443
322 Ga0501071_0101699
323 Ga0501076_0564468
324 Ga0501079_0043141
325 Ga0501080_0072132
326 Ga0501081_0034701
327 Ga0501283_001096
328 Ga0501045_0613996
329 nmdc:mga05p37_1135230_c1
330 nmdc:mga05p37_19861_c1
331 nmdc:mga05p37_59877_c1
332 nmdc:mga09592_116418_c1
333 nmdc:mga09592_25588_c1
334 nmdc:mga09592_466659_c1
335 nmdc:mga0qj67_5174_c1
336 nmdc:mga0qj67_88200_c1
337 nmdc:mga06r32_159601_c1
338 nmdc:mga06r32_255687_c1
339 nmdc:mga08y16_106403_c1
340 nmdc:mga08y16_211059_c1
341 nmdc:mga08y16_2111_c1
342 nmdc:mga08y16_2835_c1
343 nmdc:mga0a205_344881_c1
344 Ga0501084_0230747
345 Ga0501082_0144978
346 Ga0501082_0160530
347 Ga0501082_1294597
348 Ga0530510_0130139

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

89

232

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4b21-assembly1.cif.gz_A unprecedented sculpting of dna at abasic sites by dna glycosylase homolog mag2 0.9231 10 201
1y88-assembly1.cif.gz_A crystal structure of protein of unknown function af1548 0.8713 64 109
7z5b-assembly3.cif.gz_C structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with ligand th013546 0.8693 11 203
6rlw-assembly3.cif.gz_CCC structure of the human 8-oxoguanine dna glycosylase hogg1 in complex with inhibitor th5487 0.8692 11 203
2h56-assembly3.cif.gz_C crystal structure of dna-3-methyladenine glycosidase (10174367) from bacillus halodurans at 2.55 a resolution 0.8621 14 209
ID Description Score Start End Superfamily
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9416 43 152 1.10.340.30
af_B4FZ58_120_231_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9179 43 152 1.10.340.30
2yg8A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9097 41 152 1.10.340.30
af_A0A1D8PI96_136_252_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9096 44 147 1.10.340.30
2h56B02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9013 40 147 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A536I2C6-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9814 1 211 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A2W4MJR9-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9801 5 213 GO:0004252
GO:0005737
GO:0006285
GO:0006307
GO:0006465
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A350BQ97-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9785 22 206 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-K9ZYY9-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9752 3 211 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916
AF-A0A7Y3CQF1-F1-model_v4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 0.9747 5 209 GO:0005737
GO:0006285
GO:0006307
GO:0008725
GO:0032131
GO:0032993
GO:0043916

Map