F264255

General Info

Members Datasets Scaffolds Average Seq Length
174 142 348 399

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10035139|Ga0081455_100351393
Length 475
Sequence LTGPSSLNDALDVLLRYGALMLRTGDSAFRVHDAVERLAPRLGIDHLDLLVTVTGMTATARRGNEQVTLATKVGPLGINAARMGRLERLVDEAPANLTPSALGARLDTIEAVAPEHPIVVVAIAVGFASASFAYLNDANLAGVLATFAAGGVGQLVRSILLGRHFNQFAVTAFCALLAASFYYVAAWLLGRAGLDPGHGIGVIAAVLFLIPGFPLVAALLDLLQHQATAGVVRLAYATTLLLAAAFGLATVFIVAGVALSAPQPPSTDLALTIALRGLASLAGGCGFAVLYNSTNRTVLVVGLLALLGNELRLGLQDWGAMQPLATFTGALLVGLLASLVQGHLREPRIVLTVFQSVVLFTQGNALGGLQAAVQAGFVVGGMALGLATARFIGERQWRYERAPAISSCCPASCAMPICGPTWRPISESSAPSTTATSIRTTRSKAWPSRPNGSCWSASRWADSCRVCSRSWPPSA

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
76 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
77 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
86 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
87 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
90 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
94 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
97 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
123 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
137 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
138 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
139 2643221613 Oerskovia sp. Root22 Isolate Unclassified
140 2643221721 Oerskovia sp. Root918 Isolate Unclassified
141 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
142 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.7
Metatranscriptomes 0
Isolates 2.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 0
Rhizoplane 14.37
Rhizosphere 74.14
Stem 0
Stem Tuber 0
Unclassified 16.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10035139 3300005937 Bacteria 4483
2 JGI24751J29686_10000160 3300002459 Bacteria 31800
3 Ga0065707_10105111 3300005295 Bacteria 2661
4 Ga0070690_100011559 3300005330 Bacteria 5166
5 Ga0070670_100000491 3300005331 Bacteria 31599
6 Ga0070689_100011985 3300005340 Bacteria 6229
7 Ga0070687_100033494 3300005343 Bacteria 2537
8 Ga0070671_100081815 3300005355 Bacteria 2700
9 Ga0070673_100188823 3300005364 Bacteria 1769
10 Ga0070688_100016221 3300005365 Unclassified 4254
11 Ga0070709_10008559 3300005434 Bacteria 5624
12 Ga0070713_100006817 3300005436 Bacteria 7958
13 Ga0070700_100090821 3300005441 Bacteria 1992
14 Ga0070694_100003248 3300005444 Bacteria 9705
15 Ga0070694_100017120 3300005444 Bacteria 4574
16 Ga0070708_100050025 3300005445 Unclassified 3699
17 Ga0070663_100008495 3300005455 Bacteria 6319
18 Ga0070678_100011301 3300005456 Bacteria 5501
19 Ga0070706_100080563 3300005467 Bacteria 3015
20 Ga0070706_100083014 3300005467 Bacteria 2968
21 Ga0070707_100027163 3300005468 Bacteria 5442
22 Ga0070707_100147735 3300005468 Unclassified 2287
23 Ga0070699_100047751 3300005518 Unclassified 3704
24 Ga0070697_100088094 3300005536 Unclassified 2563
25 Ga0070686_100009550 3300005544 Bacteria 5454
26 Ga0070696_100053857 3300005546 Bacteria 2802
27 Ga0070665_100017922 3300005548 Bacteria 7110
28 Ga0068859_100015000 3300005617 Bacteria 7778
29 Ga0068859_100253556 3300005617 Bacteria 1850
30 Ga0068861_100107567 3300005719 Bacteria 2230
31 Ga0068858_100016107 3300005842 Bacteria 7022
32 Ga0081455_10001692 3300005937 Bacteria 26689
33 Ga0081455_10002120 3300005937 Bacteria 23637
34 Ga0081540_1008865 3300005983 Bacteria 6983
35 Ga0081540_1053796 3300005983 Unclassified 1971
36 Ga0081539_10008850 3300005985 Bacteria 8608
37 Ga0075367_10062471 3300006178 Bacteria 2224
38 Ga0075370_10046440 3300006353 Bacteria 2458
39 Ga0068871_100050260 3300006358 Unclassified 3372
40 Ga0075428_100204974 3300006844 Bacteria 2131
41 Ga0075430_100010880 3300006846 Bacteria 7707
42 Ga0075431_100071590 3300006847 Bacteria 3577
43 Ga0075434_100084664 3300006871 Bacteria 3169
44 Ga0075434_100103716 3300006871 Bacteria 2852
45 Ga0075429_100011917 3300006880 Bacteria 7538
46 Ga0075436_100167023 3300006914 Unclassified 1553
47 Ga0097620_100015000 3300006931 Bacteria 7778
48 Ga0097620_100253553 3300006931 Bacteria 1850
49 Ga0105245_10020006 3300009098 Bacteria 5867
50 Ga0105247_10027223 3300009101 Unclassified 3458
51 Ga0105247_10078468 3300009101 Unclassified 2077
52 Ga0105247_10089006 3300009101 Bacteria 1957
53 Ga0114129_10273694 3300009147 Bacteria 2258
54 Ga0105243_10035463 3300009148 Unclassified 3868
55 Ga0105242_10007992 3300009176 Bacteria 8148
56 Ga0105249_10110556 3300009553 Bacteria 2597
57 Ga0163162_10002611 3300013306 Bacteria 17083
58 Ga0163162_10176452 3300013306 Unclassified 2262
59 Ga0163163_10012592 3300014325 Bacteria 7713
60 Ga0157379_10035877 3300014968 Bacteria 4422
61 Ga0157376_10035973 3300014969 Unclassified 4009
62 Ga0207710_10001858 3300025900 Bacteria 10167
63 Ga0207680_10049808 3300025903 Bacteria 2495
64 Ga0207699_10086939 3300025906 Bacteria 1953
65 Ga0207645_10027635 3300025907 Bacteria 3662
66 Ga0207643_10008483 3300025908 Bacteria 5513
67 Ga0207684_10047811 3300025910 Bacteria 3629
68 Ga0207684_10210660 3300025910 Bacteria 1676
69 Ga0207693_10028039 3300025915 Unclassified 4451
70 Ga0207662_10038079 3300025918 Bacteria 2817
71 Ga0207650_10000011 3300025925 Bacteria 450115
72 Ga0207687_10026685 3300025927 Unclassified 3870
73 Ga0207644_10002443 3300025931 Bacteria 11983
74 Ga0207686_10005076 3300025934 Bacteria 7082
75 Ga0207670_10033560 3300025936 Unclassified 3309
76 Ga0207665_10020750 3300025939 Bacteria 4320
77 Ga0207691_10078098 3300025940 Bacteria 2980
78 Ga0207711_10012211 3300025941 Bacteria 7142
79 Ga0207712_10018525 3300025961 Bacteria 4536
80 Ga0207712_10036532 3300025961 Bacteria 3347
81 Ga0207658_10048411 3300025986 Bacteria 3117
82 Ga0207678_10010560 3300026067 Bacteria 8112
83 Ga0207708_10035366 3300026075 Bacteria 3801
84 Ga0207708_10115882 3300026075 Bacteria 2084
85 Ga0207676_10074489 3300026095 Unclassified 2735
86 Ga0207675_100087739 3300026118 Bacteria 2922
87 Ga0268266_10016445 3300028379 Bacteria 6323
88 Ga0268264_10158654 3300028381 Bacteria 2035
89 Ga0268264_10252515 3300028381 Unclassified 1639
90 Ga0265325_10096675 3300031241 Unclassified 1451
91 Ga0373946_0028486 3300035171 Unclassified 2216
92 Ga0373931_0012103 3300035691 Bacteria 4176
93 Ga0373947_0016916 3300035725 Bacteria 4189
94 Ga0373925_0027266 3300037068 Bacteria 4183
95 Ga0395901_0070052 3300038443 Bacteria 3653
96 Ga0436360_0567720 3300039438 Bacteria 1443
97 Ga0436360_1037876 3300039438 Bacteria 5924
98 Ga0495629_0004435 3300046459 Bacteria 10516
99 Ga0495641_0050168 3300046461 Unclassified 1908
100 Ga0495582_0037875 3300046473 Bacteria 2653
101 Ga0495639_0030266 3300046475 Bacteria 2406
102 Ga0495585_0000442 3300046492 Bacteria 39742
103 Ga0495585_0011853 3300046492 Bacteria 5150
104 Ga0495594_0060814 3300046499 Bacteria 2090
105 Ga0495583_0032077 3300046506 Bacteria 2539
106 Ga0495642_0012873 3300046528 Bacteria 3228
107 Ga0495633_0002158 3300046558 Bacteria 14105
108 Ga0495611_0042117 3300046648 Bacteria 2038
109 Ga0495658_0002330 3300046683 Bacteria 9586
110 Ga0495613_0032756 3300046689 Bacteria 3861
111 Ga0495670_0003350 3300046691 Bacteria 7888
112 Ga0495660_0101957 3300046810 Bacteria 1476
113 Ga0495676_0142766 3300047321 Unclassified 1714
114 Ga0495680_0010826 3300047322 Bacteria 8118
115 Ga0495683_0058232 3300047323 Bacteria 1919
116 Ga0495681_0030864 3300047470 Bacteria 2723
117 Ga0495593_0025685 3300047673 Unclassified 3260
118 Ga0496100_0004754 3300048903 Bacteria 7243
119 Ga0496101_0007941 3300048904 Bacteria 6912
120 Ga0496102_0003311 3300048905 Bacteria 13655
121 Ga0496104_0000892 3300048907 Bacteria 25671
122 Ga0496104_0071327 3300048907 Unclassified 3302
123 Ga0496104_0326846 3300048907 Bacteria 1447
124 Ga0496105_0018054 3300048908 Bacteria 5663
125 Ga0496105_0027672 3300048908 Bacteria 4634
126 Ga0496106_0012831 3300048909 Bacteria 6185
127 Ga0496107_0004156 3300048910 Bacteria 9766
128 Ga0496107_0061908 3300048910 Bacteria 2710
129 Ga0496108_0006756 3300048911 Bacteria 9286
130 Ga0496108_0042380 3300048911 Unclassified 3799
131 Ga0496109_0005532 3300048912 Bacteria 10581
132 Ga0496109_0027858 3300048912 Bacteria 5049
133 Ga0496110_0305096 3300048913 Unclassified 1450
134 Ga0496111_0050275 3300048914 Bacteria 3006
135 Ga0496111_0104714 3300048914 Unclassified 2081
136 Ga0496112_0031088 3300048915 Bacteria 5174
137 Ga0496112_0125448 3300048915 Bacteria 2538
138 Ga0496114_0018869 3300048917 Bacteria 5584
139 Ga0496114_0090620 3300048917 Unclassified 2596
140 Ga0496115_0010253 3300048918 Bacteria 6992
141 Ga0496115_0096829 3300048918 Bacteria 2416
142 Ga0496115_0129039 3300048918 Bacteria 2083
143 Ga0496118_0070225 3300048921 Bacteria 2530
144 Ga0496121_0036960 3300048924 Bacteria 4344
145 Ga0496122_0051164 3300048925 Bacteria 3142
146 Ga0496123_0007170 3300048926 Bacteria 10580
147 Ga0496124_0064413 3300048927 Bacteria 3060
148 Ga0496125_0000873 3300048928 Bacteria 48023
149 Ga0501034_0211778 3300049571 Bacteria 1893
150 Ga0501038_0003212 3300049574 Bacteria 15252
151 nmdc:mga03683_57139_c1 3300050489 Bacteria 1642
152 nmdc:mga03683_7142_c1 3300050489 Bacteria 3864
153 nmdc:mga03n38_35771_c1 3300050490 Bacteria 2130
154 nmdc:mga00v17_47078_c1 3300050491 Bacteria 2611
155 nmdc:mga0k408_16677_c1 3300050493 Bacteria 4080
156 nmdc:mga05p37_97146_c1 3300050507 Bacteria 3629
157 nmdc:mga09592_6799_c1 3300050508 Bacteria 9307
158 nmdc:mga06r32_119834_c1 3300050510 Bacteria 2595
159 nmdc:mga08y16_450711_c1 3300050511 Bacteria 1312
160 nmdc:mga0n895_114256_c1 3300050512 Bacteria 2718
161 nmdc:mga0n895_117544_c1 3300050512 Bacteria 2678
162 nmdc:mga0n895_195465_c1 3300050512 Bacteria 2054
163 nmdc:mga08x19_112734_c1 3300050514 Bacteria 1815
164 nmdc:mga0a205_37751_c1 3300050515 Bacteria 4645
165 nmdc:mga0sz30_3608_c1 3300050516 Bacteria 5581
166 Ga0495619_0001878 3300053085 Bacteria 13998
167 Ga0500641_0001245 3300053096 Bacteria 9048
168 Ga0500595_025699 3300053119 Unclassified 2037
169 Ga0500616_0001129 3300053153 Bacteria 27455
170 Ga0500636_0038443 3300053177 Bacteria 2831
171 2644084070 2643221613 Bacteria 4622396
172 2644666666 2643221721 Bacteria 4486924
173 2870629544 2870628048 Bacteria 3696012
174 2935892809 2935890801 Bacteria 4593001
175 Ga0081455_10035139
176 JGI24751J29686_10000160
177 Ga0065707_10105111
178 Ga0070690_100011559
179 Ga0070670_100000491
180 Ga0070689_100011985
181 Ga0070687_100033494
182 Ga0070671_100081815
183 Ga0070673_100188823
184 Ga0070688_100016221
185 Ga0070709_10008559
186 Ga0070713_100006817
187 Ga0070700_100090821
188 Ga0070694_100003248
189 Ga0070694_100017120
190 Ga0070708_100050025
191 Ga0070663_100008495
192 Ga0070678_100011301
193 Ga0070706_100080563
194 Ga0070706_100083014
195 Ga0070707_100027163
196 Ga0070707_100147735
197 Ga0070699_100047751
198 Ga0070697_100088094
199 Ga0070686_100009550
200 Ga0070696_100053857
201 Ga0070665_100017922
202 Ga0068859_100015000
203 Ga0068859_100253556
204 Ga0068861_100107567
205 Ga0068858_100016107
206 Ga0081455_10001692
207 Ga0081455_10002120
208 Ga0081540_1008865
209 Ga0081540_1053796
210 Ga0081539_10008850
211 Ga0075367_10062471
212 Ga0075370_10046440
213 Ga0068871_100050260
214 Ga0075428_100204974
215 Ga0075430_100010880
216 Ga0075431_100071590
217 Ga0075434_100084664
218 Ga0075434_100103716
219 Ga0075429_100011917
220 Ga0075436_100167023
221 Ga0097620_100015000
222 Ga0097620_100253553
223 Ga0105245_10020006
224 Ga0105247_10027223
225 Ga0105247_10078468
226 Ga0105247_10089006
227 Ga0114129_10273694
228 Ga0105243_10035463
229 Ga0105242_10007992
230 Ga0105249_10110556
231 Ga0163162_10002611
232 Ga0163162_10176452
233 Ga0163163_10012592
234 Ga0157379_10035877
235 Ga0157376_10035973
236 Ga0207710_10001858
237 Ga0207680_10049808
238 Ga0207699_10086939
239 Ga0207645_10027635
240 Ga0207643_10008483
241 Ga0207684_10047811
242 Ga0207684_10210660
243 Ga0207693_10028039
244 Ga0207662_10038079
245 Ga0207650_10000011
246 Ga0207687_10026685
247 Ga0207644_10002443
248 Ga0207686_10005076
249 Ga0207670_10033560
250 Ga0207665_10020750
251 Ga0207691_10078098
252 Ga0207711_10012211
253 Ga0207712_10018525
254 Ga0207712_10036532
255 Ga0207658_10048411
256 Ga0207678_10010560
257 Ga0207708_10035366
258 Ga0207708_10115882
259 Ga0207676_10074489
260 Ga0207675_100087739
261 Ga0268266_10016445
262 Ga0268264_10158654
263 Ga0268264_10252515
264 Ga0265325_10096675
265 Ga0373946_0028486
266 Ga0373931_0012103
267 Ga0373947_0016916
268 Ga0373925_0027266
269 Ga0395901_0070052
270 Ga0436360_0567720
271 Ga0436360_1037876
272 Ga0495629_0004435
273 Ga0495641_0050168
274 Ga0495582_0037875
275 Ga0495639_0030266
276 Ga0495585_0000442
277 Ga0495585_0011853
278 Ga0495594_0060814
279 Ga0495583_0032077
280 Ga0495642_0012873
281 Ga0495633_0002158
282 Ga0495611_0042117
283 Ga0495658_0002330
284 Ga0495613_0032756
285 Ga0495670_0003350
286 Ga0495660_0101957
287 Ga0495676_0142766
288 Ga0495680_0010826
289 Ga0495683_0058232
290 Ga0495681_0030864
291 Ga0495593_0025685
292 Ga0496100_0004754
293 Ga0496101_0007941
294 Ga0496102_0003311
295 Ga0496104_0000892
296 Ga0496104_0071327
297 Ga0496104_0326846
298 Ga0496105_0018054
299 Ga0496105_0027672
300 Ga0496106_0012831
301 Ga0496107_0004156
302 Ga0496107_0061908
303 Ga0496108_0006756
304 Ga0496108_0042380
305 Ga0496109_0005532
306 Ga0496109_0027858
307 Ga0496110_0305096
308 Ga0496111_0050275
309 Ga0496111_0104714
310 Ga0496112_0031088
311 Ga0496112_0125448
312 Ga0496114_0018869
313 Ga0496114_0090620
314 Ga0496115_0010253
315 Ga0496115_0096829
316 Ga0496115_0129039
317 Ga0496118_0070225
318 Ga0496121_0036960
319 Ga0496122_0051164
320 Ga0496123_0007170
321 Ga0496124_0064413
322 Ga0496125_0000873
323 Ga0501034_0211778
324 Ga0501038_0003212
325 nmdc:mga03683_57139_c1
326 nmdc:mga03683_7142_c1
327 nmdc:mga03n38_35771_c1
328 nmdc:mga00v17_47078_c1
329 nmdc:mga0k408_16677_c1
330 nmdc:mga05p37_97146_c1
331 nmdc:mga09592_6799_c1
332 nmdc:mga06r32_119834_c1
333 nmdc:mga08y16_450711_c1
334 nmdc:mga0n895_114256_c1
335 nmdc:mga0n895_117544_c1
336 nmdc:mga0n895_195465_c1
337 nmdc:mga08x19_112734_c1
338 nmdc:mga0a205_37751_c1
339 nmdc:mga0sz30_3608_c1
340 Ga0495619_0001878
341 Ga0500641_0001245
342 Ga0500595_025699
343 Ga0500616_0001129
344 Ga0500636_0038443
345 2644084070
346 2644666666
347 2870629544
348 2935892809

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06738

ThrE

Putative threonine/serine exporter

12

255

0.95

PF12821

ThrE_2

Threonine/Serine exporter, ThrE

276

392

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2lkk-assembly1.cif.gz_A human l-fabp in complex with oleate 0.7329 63 88
7ujl-assembly1.cif.gz_A bacteriophage lambda red-beta n-terminal domain helical assembly in complex with dsdna 0.6298 48 86
6ehr-assembly1.cif.gz_D the crystal structure of the human lamtor-raga ctd-ragc ctd complex 0.5248 42 86
3fa7-assembly2.cif.gz_B crystal structure of the apo r132k:r111l:l121e:r59e mutant of cellular retinoic acid-binding protein ii at 1.90 angstrom resolution 0.4995 32 86
1xca-assembly2.cif.gz_B apo-cellular retinoic acid binding protein ii 0.4972 32 86
ID Description Score Start End Superfamily
af_B6SKB7_504_676_3.30.700.40 Alpha Beta;2-Layer Sandwich;Glycoprotein, Type 4 Pilin; 0.8073 60 89 3.30.700.40
af_Q8IKU1_4_118_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7806 58 90 2.60.40.790
af_Q5RHK5_4_99_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.584 55 89 2.30.29.30
af_Q9TXP3_1642_1744_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.5039 56 122 2.30.29.30
af_A4IBZ7_1_137_3.30.450.30 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;Dynein light chain 2a, cytoplasmic 0.4773 60 123 3.30.450.30
ID Description Score Start End GO Terms
AF-A0A640N9A2-F1-model_v4 Threonine/serine exporter family protein 0.9788 286 419 GO:0005886
GO:0015744
AF-A0A6I1FEC4-F1-model_v4 Threonine/serine exporter 0.9786 288 421 GO:0005886
GO:0015744
AF-A0A7C1EFF7-F1-model_v4 Threonine/serine exporter 0.978 283 423 GO:0005886
GO:0015744
AF-V1CC90-F1-model_v4 Threonine/Serine exporter ThrE domain-containing protein 0.9778 288 419 GO:0005886
GO:0015744
AF-A0A356B4K3-F1-model_v4 Threonine/serine exporter 0.9771 288 419 GO:0005886
GO:0015744

Map