F263976
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 174 | 122 | 348 | 418 |
Family's Representative Sequence
| Representative Sequence | 3300005355|Ga0070671_100003230|Ga0070671_1000032306 |
| Length | 475 |
| Sequence | VQEVTALHAWVKRQKVQLAGIPIPWERPPGAGFHGFARTGAGVHHAGRRPRELYYRPPMDRIRVTGGQALRGAVRIAGAKNAALPAIAAAILTEEPIHLTNVPDVRDVTTMLRVLERVGAEWDAPNHGRREIALRRVTSHEAPFELVRTMRASVLVLGPLLARHGRARVSLPGGCAIGARPVNLHIEGLKRFGAEVRVEHGYIDATCERLTGAEFVFDVVSVTGTENLMMAACLARGTTVLRGAAAEPEVADLAALLVKMGARIEGAGTSVITIEGRERLGGAEHRIIPDRIEAGTYAVAAAITGGEVRLEGCDPSHMDAVFEHLARAGAEIRREARGVVVARTGELRAVDIETAPYPGFPTDMQAQWMALMTRAEGTARIGERIFEGRFLHAVELQRMGANLIIEGRTVTARGPAVLSGADVTASDLRASACLVLAGLVAQGATMVHRVYHLDRGYERMEEKLRPLGADIERIS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Metagenome | Rhizosphere |
| 3 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 12 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 15 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 16 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 17 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 19 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 20 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 21 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 22 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 31 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300027543 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300027682 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 46 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 47 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 48 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 49 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 50 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 51 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 52 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 53 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 54 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 55 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 56 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 57 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 58 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 59 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 60 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 61 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 62 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 63 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 64 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 65 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 66 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 67 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 68 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 69 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 70 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 71 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 72 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 73 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 74 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 75 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 76 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 77 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 78 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 79 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 105 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 114 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 120 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 121 | 2687453129 | Halotalea alkalilenta IHB B 13600 | Isolate | Unclassified |
| 122 | 2929297113 | Heliophilum fasciatum MTM | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.28 |
| Metatranscriptomes | 0.57 |
| Isolates | 1.15 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.87 |
| Nodule | 0 |
| Rhizoplane | 0.57 |
| Rhizosphere | 79.89 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070671_100003230 | 3300005355 | Bacteria | 12709 |
| 2 | JGI24743J22301_10009913 | 3300001991 | Bacteria | 1694 |
| 3 | Ga0065704_10005097 | 3300005289 | Bacteria | 3050 |
| 4 | Ga0070689_100007131 | 3300005340 | Bacteria | 7790 |
| 5 | Ga0070692_10009260 | 3300005345 | Bacteria | 4434 |
| 6 | Ga0070709_10000097 | 3300005434 | Bacteria | 61981 |
| 7 | Ga0070714_100002634 | 3300005435 | Bacteria | 13211 |
| 8 | Ga0070713_100069418 | 3300005436 | Bacteria | 2971 |
| 9 | Ga0070700_100066265 | 3300005441 | Bacteria | 2292 |
| 10 | Ga0070694_100001200 | 3300005444 | Bacteria | 14934 |
| 11 | Ga0070694_100059267 | 3300005444 | Bacteria | 2607 |
| 12 | Ga0068867_100051795 | 3300005459 | Bacteria | 3028 |
| 13 | Ga0070697_100000139 | 3300005536 | Bacteria | 58838 |
| 14 | Ga0070704_100006715 | 3300005549 | Bacteria | 6808 |
| 15 | Ga0070704_100011037 | 3300005549 | Bacteria | 5514 |
| 16 | Ga0068852_100042351 | 3300005616 | Bacteria | 3855 |
| 17 | Ga0068859_100000090 | 3300005617 | Bacteria | 83289 |
| 18 | Ga0081455_10003905 | 3300005937 | Bacteria | 16973 |
| 19 | Ga0070717_10230364 | 3300006028 | Bacteria | 1631 |
| 20 | Ga0075366_10004474 | 3300006195 | Bacteria | 7500 |
| 21 | Ga0075366_10047451 | 3300006195 | Bacteria | 2546 |
| 22 | Ga0075428_100107370 | 3300006844 | Bacteria | 3043 |
| 23 | Ga0075431_100016167 | 3300006847 | Bacteria | 7571 |
| 24 | Ga0075436_100001213 | 3300006914 | Bacteria | 17524 |
| 25 | Ga0097620_100000090 | 3300006931 | Bacteria | 83289 |
| 26 | Ga0111539_10442501 | 3300009094 | Bacteria | 1513 |
| 27 | Ga0114129_10556583 | 3300009147 | Bacteria | 1491 |
| 28 | Ga0105237_10001485 | 3300009545 | Bacteria | 30894 |
| 29 | Ga0105238_10227444 | 3300009551 | Bacteria | 1842 |
| 30 | Ga0157369_10259042 | 3300013105 | Bacteria | 1814 |
| 31 | Ga0157374_10131178 | 3300013296 | Bacteria | 2425 |
| 32 | Ga0157380_10026188 | 3300014326 | Bacteria | 4428 |
| 33 | Ga0157380_10162242 | 3300014326 | Bacteria | 1944 |
| 34 | Ga0213875_10001688 | 3300021388 | Bacteria | 13887 |
| 35 | Ga0207682_10019418 | 3300025893 | Bacteria | 2660 |
| 36 | Ga0207699_10000943 | 3300025906 | Bacteria | 13852 |
| 37 | Ga0207705_10011842 | 3300025909 | Bacteria | 6303 |
| 38 | Ga0207644_10002172 | 3300025931 | Bacteria | 12720 |
| 39 | Ga0207670_10139379 | 3300025936 | Bacteria | 1787 |
| 40 | Ga0207691_10071010 | 3300025940 | Bacteria | 3144 |
| 41 | Ga0207711_10211153 | 3300025941 | Bacteria | 1773 |
| 42 | Ga0207667_10061276 | 3300025949 | Bacteria | 3936 |
| 43 | Ga0207651_10104556 | 3300025960 | Bacteria | 2110 |
| 44 | Ga0207708_10078095 | 3300026075 | Bacteria | 2541 |
| 45 | Ga0207698_10041062 | 3300026142 | Bacteria | 3444 |
| 46 | Ga0207698_10129194 | 3300026142 | Bacteria | 2156 |
| 47 | Ga0209999_1000639 | 3300027543 | Bacteria | 5597 |
| 48 | Ga0209983_1001955 | 3300027665 | Bacteria | 4567 |
| 49 | Ga0209971_1000475 | 3300027682 | Bacteria | 10639 |
| 50 | Ga0265323_10022405 | 3300028653 | Bacteria | 2414 |
| 51 | Ga0307515_10000018 | 3300028794 | Bacteria | 424853 |
| 52 | Ga0265316_10199472 | 3300031344 | Bacteria | 1484 |
| 53 | Ga0265316_10224963 | 3300031344 | Bacteria | 1383 |
| 54 | Ga0307508_10027758 | 3300031616 | Bacteria | 5123 |
| 55 | Ga0316575_10033148 | 3300031665 | Bacteria | 2025 |
| 56 | Ga0316579_10019852 | 3300031691 | Bacteria | 2973 |
| 57 | Ga0316579_10025864 | 3300031691 | Bacteria | 2653 |
| 58 | Ga0316577_10003605 | 3300031733 | Bacteria | 7853 |
| 59 | Ga0316577_10036019 | 3300031733 | Bacteria | 2766 |
| 60 | Ga0316577_10042718 | 3300031733 | Bacteria | 2536 |
| 61 | Ga0316577_10043037 | 3300031733 | Bacteria | 2527 |
| 62 | Ga0307416_100057411 | 3300032002 | Bacteria | 3149 |
| 63 | Ga0307416_100095531 | 3300032002 | Bacteria | 2567 |
| 64 | Ga0316583_10006400 | 3300032133 | Bacteria | 4229 |
| 65 | Ga0316593_10038356 | 3300032168 | Bacteria | 1586 |
| 66 | Ga0373954_0024118 | 3300035118 | Bacteria | 2772 |
| 67 | Ga0373955_0008224 | 3300035172 | Bacteria | 4836 |
| 68 | Ga0373955_0040056 | 3300035172 | Bacteria | 2504 |
| 69 | Ga0316574_0000930 | 3300035398 | Bacteria | 13045 |
| 70 | Ga0316574_0065600 | 3300035398 | Bacteria | 2285 |
| 71 | Ga0373933_0124767 | 3300035724 | Bacteria | 1615 |
| 72 | Ga0373937_0019909 | 3300036401 | Bacteria | 6011 |
| 73 | Ga0316582_0010630 | 3300036647 | Bacteria | 5049 |
| 74 | Ga0316582_0021908 | 3300036647 | Bacteria | 3784 |
| 75 | Ga0316582_0067153 | 3300036647 | Bacteria | 2313 |
| 76 | Ga0316584_0003825 | 3300036712 | Bacteria | 9865 |
| 77 | Ga0316584_0022118 | 3300036712 | Bacteria | 4634 |
| 78 | Ga0316584_0023978 | 3300036712 | Bacteria | 4461 |
| 79 | Ga0316584_0083944 | 3300036712 | Bacteria | 2386 |
| 80 | Ga0316584_0097536 | 3300036712 | Bacteria | 2201 |
| 81 | Ga0395905_0000251 | 3300037471 | Bacteria | 80132 |
| 82 | Ga0316581_0014008 | 3300037588 | Bacteria | 2280 |
| 83 | Ga0316581_0036943 | 3300037588 | Bacteria | 1483 |
| 84 | Ga0436364_1516114 | 3300037853 | Bacteria | 10395 |
| 85 | Ga0400484_17448 | 3300038725 | Bacteria | 2250 |
| 86 | Ga0400484_36713 | 3300038725 | Bacteria | 1865 |
| 87 | Ga0400484_39952 | 3300038725 | Bacteria | 10471 |
| 88 | Ga0400490_00069 | 3300038726 | Bacteria | 3389 |
| 89 | Ga0400490_26789 | 3300038726 | Bacteria | 1320 |
| 90 | Ga0400490_49886 | 3300038726 | Bacteria | 96748 |
| 91 | Ga0400490_57520 | 3300038726 | Bacteria | 9791 |
| 92 | Ga0400491_20042 | 3300038727 | Bacteria | 6172 |
| 93 | Ga0400485_14508 | 3300038735 | Bacteria | 18030 |
| 94 | Ga0400485_15256 | 3300038735 | Bacteria | 1941 |
| 95 | Ga0400485_22435 | 3300038735 | Bacteria | 51084 |
| 96 | Ga0400488_04900 | 3300038741 | Bacteria | 8422 |
| 97 | Ga0400488_06106 | 3300038741 | Bacteria | 2943 |
| 98 | Ga0400486_06843 | 3300038742 | Bacteria | 5751 |
| 99 | Ga0400486_09586 | 3300038742 | Bacteria | 31486 |
| 100 | Ga0400486_29159 | 3300038742 | Bacteria | 37789 |
| 101 | Ga0400483_191910 | 3300039062 | Bacteria | 4922 |
| 102 | Ga0400483_236509 | 3300039062 | Bacteria | 85469 |
| 103 | Ga0400483_266845 | 3300039062 | Bacteria | 22459 |
| 104 | Ga0400489_85059 | 3300039093 | Bacteria | 46511 |
| 105 | Ga0400489_86044 | 3300039093 | Bacteria | 6448 |
| 106 | Ga0400487_12326 | 3300039110 | Bacteria | 5622 |
| 107 | Ga0400487_28208 | 3300039110 | Bacteria | 4213 |
| 108 | Ga0436365_0374498 | 3300039437 | Bacteria | 1580 |
| 109 | Ga0439456_033641 | 3300042013 | Bacteria | 1103 |
| 110 | Ga0451577_0000074 | 3300042876 | Bacteria | 232698 |
| 111 | Ga0451577_0134948 | 3300042876 | Bacteria | 2216 |
| 112 | Ga0451577_0147977 | 3300042876 | Bacteria | 2112 |
| 113 | Ga0453684_0000482 | 3300044712 | Bacteria | 158296 |
| 114 | Ga0453684_0037524 | 3300044712 | Bacteria | 6650 |
| 115 | Ga0451576_0039786 | 3300045051 | Bacteria | 4977 |
| 116 | Ga0495592_0037426 | 3300046454 | Bacteria | 3653 |
| 117 | Ga0495592_0050627 | 3300046454 | Bacteria | 3086 |
| 118 | Ga0495592_0051767 | 3300046454 | Bacteria | 3049 |
| 119 | Ga0495651_0106042 | 3300046462 | Bacteria | 2084 |
| 120 | Ga0495651_0106665 | 3300046462 | Bacteria | 2076 |
| 121 | Ga0495608_0026959 | 3300046511 | Bacteria | 3913 |
| 122 | Ga0495608_0073253 | 3300046511 | Bacteria | 2234 |
| 123 | Ga0495618_0218206 | 3300046514 | Bacteria | 1204 |
| 124 | Ga0495628_0000597 | 3300046516 | Bacteria | 33245 |
| 125 | Ga0495630_0018486 | 3300046517 | Bacteria | 5120 |
| 126 | Ga0495630_0059789 | 3300046517 | Bacteria | 2860 |
| 127 | Ga0495652_0021792 | 3300046529 | Bacteria | 5696 |
| 128 | Ga0495652_0103096 | 3300046529 | Bacteria | 2310 |
| 129 | Ga0495598_0000847 | 3300046537 | Bacteria | 5866 |
| 130 | Ga0495645_0013403 | 3300046543 | Bacteria | 5794 |
| 131 | Ga0495667_0000486 | 3300046559 | Bacteria | 25326 |
| 132 | Ga0495667_0011234 | 3300046559 | Bacteria | 6063 |
| 133 | Ga0495634_0016650 | 3300046642 | Bacteria | 5254 |
| 134 | Ga0495634_0076669 | 3300046642 | Bacteria | 2194 |
| 135 | Ga0495635_0110843 | 3300046663 | Bacteria | 1874 |
| 136 | Ga0495599_0041897 | 3300046678 | Bacteria | 2873 |
| 137 | Ga0495623_0021804 | 3300046679 | Bacteria | 4137 |
| 138 | Ga0495646_0012149 | 3300046680 | Bacteria | 5475 |
| 139 | Ga0495613_0230249 | 3300046689 | Bacteria | 1298 |
| 140 | Ga0495624_0049693 | 3300046690 | Bacteria | 2659 |
| 141 | Ga0495600_0099001 | 3300046809 | Bacteria | 1901 |
| 142 | Ga0495581_0085658 | 3300047315 | Bacteria | 1827 |
| 143 | Ga0495604_0011722 | 3300047317 | Bacteria | 6970 |
| 144 | Ga0495604_0165794 | 3300047317 | Bacteria | 1558 |
| 145 | Ga0495674_0006136 | 3300047319 | Bacteria | 11540 |
| 146 | Ga0495674_0018121 | 3300047319 | Bacteria | 6553 |
| 147 | Ga0495680_0084806 | 3300047322 | Bacteria | 2387 |
| 148 | Ga0495680_0116994 | 3300047322 | Bacteria | 1971 |
| 149 | Ga0495675_0068034 | 3300047444 | Bacteria | 2250 |
| 150 | Ga0495684_0014190 | 3300047471 | Bacteria | 6129 |
| 151 | Ga0495684_0059364 | 3300047471 | Bacteria | 2913 |
| 152 | Ga0495602_0024197 | 3300048088 | Bacteria | 5896 |
| 153 | Ga0496114_0016101 | 3300048917 | Bacteria | 6018 |
| 154 | Ga0501032_0066003 | 3300049569 | Bacteria | 2419 |
| 155 | Ga0501037_0000686 | 3300049573 | Bacteria | 25818 |
| 156 | Ga0501037_0017144 | 3300049573 | Bacteria | 5330 |
| 157 | Ga0501039_0025173 | 3300049575 | Bacteria | 4572 |
| 158 | Ga0501047_0116940 | 3300049581 | Bacteria | 2548 |
| 159 | Ga0501069_0015372 | 3300049585 | Bacteria | 4101 |
| 160 | Ga0501070_0017664 | 3300049586 | Bacteria | 5989 |
| 161 | Ga0501074_0000084 | 3300049590 | Bacteria | 45955 |
| 162 | Ga0501080_0004781 | 3300049742 | Bacteria | 12080 |
| 163 | Ga0501080_0162533 | 3300049742 | Bacteria | 2062 |
| 164 | nmdc:mga0k408_28419_c1 | 3300050493 | Bacteria | 3180 |
| 165 | nmdc:mga05p37_87704_c1 | 3300050507 | Bacteria | 3835 |
| 166 | nmdc:mga08y16_373326_c1 | 3300050511 | Bacteria | 1463 |
| 167 | nmdc:mga08x19_1380_c1 | 3300050514 | Bacteria | 15034 |
| 168 | nmdc:mga0a205_92211_c1 | 3300050515 | Bacteria | 2927 |
| 169 | Ga0495601_0014532 | 3300053077 | Bacteria | 4743 |
| 170 | Ga0495601_0114859 | 3300053077 | Bacteria | 1745 |
| 171 | Ga0500562_001446 | 3300053108 | Bacteria | 5851 |
| 172 | Ga0500616_0000017 | 3300053153 | Bacteria | 622969 |
| 173 | 2687578419 | 2687453129 | Bacteria | 4387428 |
| 174 | 2929299440 | 2929297113 | Bacteria | 3141306 |
| 175 | Ga0070671_100003230 | |||
| 176 | JGI24743J22301_10009913 | |||
| 177 | Ga0065704_10005097 | |||
| 178 | Ga0070689_100007131 | |||
| 179 | Ga0070692_10009260 | |||
| 180 | Ga0070709_10000097 | |||
| 181 | Ga0070714_100002634 | |||
| 182 | Ga0070713_100069418 | |||
| 183 | Ga0070700_100066265 | |||
| 184 | Ga0070694_100001200 | |||
| 185 | Ga0070694_100059267 | |||
| 186 | Ga0068867_100051795 | |||
| 187 | Ga0070697_100000139 | |||
| 188 | Ga0070704_100006715 | |||
| 189 | Ga0070704_100011037 | |||
| 190 | Ga0068852_100042351 | |||
| 191 | Ga0068859_100000090 | |||
| 192 | Ga0081455_10003905 | |||
| 193 | Ga0070717_10230364 | |||
| 194 | Ga0075366_10004474 | |||
| 195 | Ga0075366_10047451 | |||
| 196 | Ga0075428_100107370 | |||
| 197 | Ga0075431_100016167 | |||
| 198 | Ga0075436_100001213 | |||
| 199 | Ga0097620_100000090 | |||
| 200 | Ga0111539_10442501 | |||
| 201 | Ga0114129_10556583 | |||
| 202 | Ga0105237_10001485 | |||
| 203 | Ga0105238_10227444 | |||
| 204 | Ga0157369_10259042 | |||
| 205 | Ga0157374_10131178 | |||
| 206 | Ga0157380_10026188 | |||
| 207 | Ga0157380_10162242 | |||
| 208 | Ga0213875_10001688 | |||
| 209 | Ga0207682_10019418 | |||
| 210 | Ga0207699_10000943 | |||
| 211 | Ga0207705_10011842 | |||
| 212 | Ga0207644_10002172 | |||
| 213 | Ga0207670_10139379 | |||
| 214 | Ga0207691_10071010 | |||
| 215 | Ga0207711_10211153 | |||
| 216 | Ga0207667_10061276 | |||
| 217 | Ga0207651_10104556 | |||
| 218 | Ga0207708_10078095 | |||
| 219 | Ga0207698_10041062 | |||
| 220 | Ga0207698_10129194 | |||
| 221 | Ga0209999_1000639 | |||
| 222 | Ga0209983_1001955 | |||
| 223 | Ga0209971_1000475 | |||
| 224 | Ga0265323_10022405 | |||
| 225 | Ga0307515_10000018 | |||
| 226 | Ga0265316_10199472 | |||
| 227 | Ga0265316_10224963 | |||
| 228 | Ga0307508_10027758 | |||
| 229 | Ga0316575_10033148 | |||
| 230 | Ga0316579_10019852 | |||
| 231 | Ga0316579_10025864 | |||
| 232 | Ga0316577_10003605 | |||
| 233 | Ga0316577_10036019 | |||
| 234 | Ga0316577_10042718 | |||
| 235 | Ga0316577_10043037 | |||
| 236 | Ga0307416_100057411 | |||
| 237 | Ga0307416_100095531 | |||
| 238 | Ga0316583_10006400 | |||
| 239 | Ga0316593_10038356 | |||
| 240 | Ga0373954_0024118 | |||
| 241 | Ga0373955_0008224 | |||
| 242 | Ga0373955_0040056 | |||
| 243 | Ga0316574_0000930 | |||
| 244 | Ga0316574_0065600 | |||
| 245 | Ga0373933_0124767 | |||
| 246 | Ga0373937_0019909 | |||
| 247 | Ga0316582_0010630 | |||
| 248 | Ga0316582_0021908 | |||
| 249 | Ga0316582_0067153 | |||
| 250 | Ga0316584_0003825 | |||
| 251 | Ga0316584_0022118 | |||
| 252 | Ga0316584_0023978 | |||
| 253 | Ga0316584_0083944 | |||
| 254 | Ga0316584_0097536 | |||
| 255 | Ga0395905_0000251 | |||
| 256 | Ga0316581_0014008 | |||
| 257 | Ga0316581_0036943 | |||
| 258 | Ga0436364_1516114 | |||
| 259 | Ga0400484_17448 | |||
| 260 | Ga0400484_36713 | |||
| 261 | Ga0400484_39952 | |||
| 262 | Ga0400490_00069 | |||
| 263 | Ga0400490_26789 | |||
| 264 | Ga0400490_49886 | |||
| 265 | Ga0400490_57520 | |||
| 266 | Ga0400491_20042 | |||
| 267 | Ga0400485_14508 | |||
| 268 | Ga0400485_15256 | |||
| 269 | Ga0400485_22435 | |||
| 270 | Ga0400488_04900 | |||
| 271 | Ga0400488_06106 | |||
| 272 | Ga0400486_06843 | |||
| 273 | Ga0400486_09586 | |||
| 274 | Ga0400486_29159 | |||
| 275 | Ga0400483_191910 | |||
| 276 | Ga0400483_236509 | |||
| 277 | Ga0400483_266845 | |||
| 278 | Ga0400489_85059 | |||
| 279 | Ga0400489_86044 | |||
| 280 | Ga0400487_12326 | |||
| 281 | Ga0400487_28208 | |||
| 282 | Ga0436365_0374498 | |||
| 283 | Ga0439456_033641 | |||
| 284 | Ga0451577_0000074 | |||
| 285 | Ga0451577_0134948 | |||
| 286 | Ga0451577_0147977 | |||
| 287 | Ga0453684_0000482 | |||
| 288 | Ga0453684_0037524 | |||
| 289 | Ga0451576_0039786 | |||
| 290 | Ga0495592_0037426 | |||
| 291 | Ga0495592_0050627 | |||
| 292 | Ga0495592_0051767 | |||
| 293 | Ga0495651_0106042 | |||
| 294 | Ga0495651_0106665 | |||
| 295 | Ga0495608_0026959 | |||
| 296 | Ga0495608_0073253 | |||
| 297 | Ga0495618_0218206 | |||
| 298 | Ga0495628_0000597 | |||
| 299 | Ga0495630_0018486 | |||
| 300 | Ga0495630_0059789 | |||
| 301 | Ga0495652_0021792 | |||
| 302 | Ga0495652_0103096 | |||
| 303 | Ga0495598_0000847 | |||
| 304 | Ga0495645_0013403 | |||
| 305 | Ga0495667_0000486 | |||
| 306 | Ga0495667_0011234 | |||
| 307 | Ga0495634_0016650 | |||
| 308 | Ga0495634_0076669 | |||
| 309 | Ga0495635_0110843 | |||
| 310 | Ga0495599_0041897 | |||
| 311 | Ga0495623_0021804 | |||
| 312 | Ga0495646_0012149 | |||
| 313 | Ga0495613_0230249 | |||
| 314 | Ga0495624_0049693 | |||
| 315 | Ga0495600_0099001 | |||
| 316 | Ga0495581_0085658 | |||
| 317 | Ga0495604_0011722 | |||
| 318 | Ga0495604_0165794 | |||
| 319 | Ga0495674_0006136 | |||
| 320 | Ga0495674_0018121 | |||
| 321 | Ga0495680_0084806 | |||
| 322 | Ga0495680_0116994 | |||
| 323 | Ga0495675_0068034 | |||
| 324 | Ga0495684_0014190 | |||
| 325 | Ga0495684_0059364 | |||
| 326 | Ga0495602_0024197 | |||
| 327 | Ga0496114_0016101 | |||
| 328 | Ga0501032_0066003 | |||
| 329 | Ga0501037_0000686 | |||
| 330 | Ga0501037_0017144 | |||
| 331 | Ga0501039_0025173 | |||
| 332 | Ga0501047_0116940 | |||
| 333 | Ga0501069_0015372 | |||
| 334 | Ga0501070_0017664 | |||
| 335 | Ga0501074_0000084 | |||
| 336 | Ga0501080_0004781 | |||
| 337 | Ga0501080_0162533 | |||
| 338 | nmdc:mga0k408_28419_c1 | |||
| 339 | nmdc:mga05p37_87704_c1 | |||
| 340 | nmdc:mga08y16_373326_c1 | |||
| 341 | nmdc:mga08x19_1380_c1 | |||
| 342 | nmdc:mga0a205_92211_c1 | |||
| 343 | Ga0495601_0014532 | |||
| 344 | Ga0495601_0114859 | |||
| 345 | Ga0500562_001446 | |||
| 346 | Ga0500616_0000017 | |||
| 347 | 2687578419 | |||
| 348 | 2929299440 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6q0y-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile, mutant c116s, in the presence of uridine-diphosphate-n-acetylglucosamine | 0.9806 | 1 | 417 |
| 6q0a-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile, mutation c116d, n the presence of udp-n-acetylmuramic acid | 0.9805 | 1 | 417 |
| 6q03-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile in the presence of udp-n-acetyl-alpha-d-muramic acid with modified cys116 (s-[(1s)-1-carboxy-1-(phosphonooxy)ethyl]-l-cysteine) | 0.9805 | 1 | 417 |
| 6q0y-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile, mutant c116s, in the presence of uridine-diphosphate-n-acetylglucosamine | 0.9783 | 1 | 417 |
| 6q0a-assembly1.cif.gz_A | crystal structure of mura from clostridium difficile, mutation c116d, n the presence of udp-n-acetylmuramic acid | 0.9782 | 1 | 417 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FWD4_231_413_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9842 | 229 | 412 | 3.65.10.10 |
| af_Q2FWF4_219_417_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9812 | 216 | 414 | 3.65.10.10 |
| af_P0A749_226_417_3.40.50.1370 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Aspartate/ornithine carbamoyltransferase | 0.9799 | 228 | 417 | 3.40.50.1370 |
| af_P9WJM1_237_415_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9793 | 238 | 414 | 3.65.10.10 |
| af_Q2FWD4_231_413_3.65.10.10 | Alpha Beta;Alpha-beta prism;UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain;Enolpyruvate transferase domain | 0.9789 | 229 | 412 | 3.65.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2M9P355-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9956 | 230 | 356 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0051301 GO:0071555 |
| AF-A0A3D4P6A2-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9952 | 124 | 236 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0051301 GO:0071555 |
| AF-A0A2V5NNQ5-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) | 0.9929 | 1 | 374 |
GO:0005737
GO:0008360 GO:0008760 GO:0009252 GO:0019277 GO:0051301 GO:0071555 |
| AF-K1TM74-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9924 | 176 | 284 |
GO:0005737
GO:0008360 GO:0009252 GO:0016765 GO:0051301 GO:0071555 |
| AF-A0A382JC91-F1-model_v4 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) | 0.9917 | 229 | 418 |
GO:0005737
GO:0008360 GO:0009252 GO:0016765 GO:0051301 GO:0071555 |