F263919

General Info

Members Datasets Scaffolds Average Seq Length
174 132 348 620

Family's Representative Sequence

Representative Sequence 3300005335|Ga0070666_10000957|Ga0070666_100009579
Length 744
Sequence MPKQKVRQVTEKVVDQLKRLPAQPGCYIYKSAKGEVLYVGKALSLRNRVRSYFQDSTRHGPRIERLVSKVEDIEWIVVDSELEALVLECNLIKQHRPPYNVRLRDDKSYPYIVVTKEKFPRVMFTRRSRHDGGKYFGPYASAFAVRDTLQLLHKVFPLIPCGKSWTGEAVQRPCLYYHLGRCMGPCAGLADAKEYKGVISKVERFLNGKEEGILDELRFEMEAAAADEDFEEAATLRDQIAALEGIMQKQKVLVEKAVDQDVVAVVKDERGAAIQMLYIRGGKLIGQRQFILDGASEAPTGEAVQEFVKQYYADAPEVPREVLLPVEIAEREIVQAFLRQKRGSAVNVDVPQGGDKLRLVEMAASNAEQALATFAQELQQKEQWAESAMTQLQEELDLPGPPVRIECYDISNTQGMAPVGSMVVVENGEPAKDQYRRFKIRYHPESPNDFAMMHEVITRRLKAYVEGDAKFSRLPDLIVIDGGKGQLAAALKARDEVGLNVPMTGLAKRMEILFTPCEPLPVPDVGSLIASLTNAEPQPTDKDCVPATGEDLVRQLPIFELLEDEPALNLSSDGPSEDHEFAALHGAGVDAIAAEGEVGPRAIPMLTEPPDPRSEIRDPSSTQTGKKSRLERDADYDYARPPMKEYGFKDVVLPLNSPGLLLVRRLRDEAHRFALSYHRKLRDKRMHGSALEEVPGVGPRRKRLLLRTFGSVEGIRRATVEEIAAVPTMTKRLAAQIKDYLQDA

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
42 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
69 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
70 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
78 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
79 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
85 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
101 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
102 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
103 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
104 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
105 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
127 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
128 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
129 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
130 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
131 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
132 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.98
Metatranscriptomes 0.57
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.3
Nodule 3.45
Rhizoplane 6.9
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 1.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10000957 3300005335 Bacteria 17607
2 Ga0055541_1000683 3300003841 Bacteria 8803
3 Ga0070683_100046224 3300005329 Bacteria 4021
4 Ga0070670_100000393 3300005331 Bacteria 36156
5 Ga0070680_100080044 3300005336 Bacteria 2694
6 Ga0070660_100002377 3300005339 Bacteria 12927
7 Ga0070691_10006536 3300005341 Bacteria 5329
8 Ga0070688_100009201 3300005365 Bacteria 5391
9 Ga0070705_100016204 3300005440 Bacteria 3870
10 Ga0070694_100038797 3300005444 Unclassified 3167
11 Ga0070708_100077911 3300005445 Bacteria 2996
12 Ga0070699_100014318 3300005518 Bacteria 6819
13 Ga0070696_100000610 3300005546 Bacteria 22948
14 Ga0068855_100048243 3300005563 Bacteria 5027
15 Ga0068854_100047205 3300005578 Bacteria 3069
16 Ga0068859_100016860 3300005617 Bacteria 7332
17 Ga0068859_100047180 3300005617 Bacteria 4328
18 Ga0068866_10038927 3300005718 Bacteria 2345
19 Ga0068861_100052962 3300005719 Bacteria 3086
20 Ga0068851_10014319 3300005834 Bacteria 3765
21 Ga0081455_10046292 3300005937 Bacteria 3776
22 Ga0081538_10015384 3300005981 Bacteria 5925
23 Ga0081539_10008184 3300005985 Bacteria 9215
24 Ga0070712_100010749 3300006175 Bacteria 5785
25 Ga0075433_10001459 3300006852 Bacteria 17478
26 Ga0075434_100003230 3300006871 Bacteria 14549
27 Ga0068865_100013693 3300006881 Bacteria 5136
28 Ga0068865_100032281 3300006881 Bacteria 3497
29 Ga0097620_100016861 3300006931 Bacteria 7332
30 Ga0097620_100047179 3300006931 Bacteria 4328
31 Ga0079104_1000084 3300006946 Bacteria 136884
32 Ga0079104_1001388 3300006946 Bacteria 16429
33 Ga0079104_1004343 3300006946 Bacteria 6115
34 Ga0079104_1008937 3300006946 Bacteria 3440
35 Ga0075435_100009327 3300007076 Bacteria 7097
36 Ga0105240_10000028 3300009093 Bacteria 347789
37 Ga0111539_10002862 3300009094 Bacteria 22924
38 Ga0111539_10056754 3300009094 Bacteria 4653
39 Ga0111539_10066353 3300009094 Bacteria 4263
40 Ga0105248_10021162 3300009177 Bacteria 7206
41 Ga0105237_10000020 3300009545 Bacteria 231046
42 Ga0105239_10001433 3300010375 Bacteria 31795
43 Ga0157374_10059191 3300013296 Bacteria 3581
44 Ga0157372_10062046 3300013307 Bacteria 4186
45 Ga0157380_10130112 3300014326 Bacteria 2146
46 Ga0182008_10005010 3300014497 Bacteria 7623
47 Ga0157376_10072729 3300014969 Bacteria 2926
48 Ga0213872_10010809 3300021361 Bacteria 4332
49 Ga0213875_10000001 3300021388 Bacteria 2793540
50 Ga0213875_10002825 3300021388 Bacteria 10182
51 Ga0213875_10006720 3300021388 Bacteria 6010
52 Ga0209258_101417 3300025242 Bacteria 8505
53 Ga0209025_1005490 3300025294 Bacteria 10315
54 Ga0207684_10016379 3300025910 Bacteria 6366
55 Ga0207695_10000088 3300025913 Bacteria 275833
56 Ga0207671_10000010 3300025914 Bacteria 568302
57 Ga0207693_10021525 3300025915 Bacteria 5122
58 Ga0207657_10007930 3300025919 Bacteria 10827
59 Ga0207659_10066664 3300025926 Bacteria 2613
60 Ga0207664_10003169 3300025929 Bacteria 10925
61 Ga0207664_10005785 3300025929 Bacteria 8457
62 Ga0207706_10016767 3300025933 Bacteria 6612
63 Ga0207669_10009923 3300025937 Bacteria 4560
64 Ga0207667_10003633 3300025949 Bacteria 19031
65 Ga0207667_10008595 3300025949 Bacteria 12118
66 Ga0207667_10080395 3300025949 Bacteria 3377
67 Ga0207703_10004906 3300026035 Bacteria 10875
68 Ga0207648_10068803 3300026089 Bacteria 3085
69 Ga0207675_100092878 3300026118 Unclassified 2838
70 Ga0209281_1000154 3300027111 Bacteria 166618
71 Ga0209281_1000187 3300027111 Bacteria 144000
72 Ga0207428_10049309 3300027907 Bacteria 3375
73 Ga0307515_10000019 3300028794 Bacteria 422262
74 Ga0265760_10001245 3300031090 Bacteria 7459
75 Ga0265325_10025448 3300031241 Bacteria 3214
76 Ga0265327_10019390 3300031251 Bacteria 4183
77 Ga0307416_100070857 3300032002 Bacteria 2893
78 Ga0395905_0000536 3300037471 Bacteria 51870
79 Ga0436364_0085967 3300037853 Bacteria 10319
80 Ga0436364_0273345 3300037853 Bacteria 2794207
81 Ga0436364_0806947 3300037853 Bacteria 23982
82 Ga0436364_1130821 3300037853 Bacteria 2933
83 Ga0395901_0048836 3300038443 Bacteria 4395
84 Ga0436365_1254483 3300039437 Bacteria 2529
85 Ga0436360_0279557 3300039438 Bacteria 2868
86 Ga0436360_0797310 3300039438 Bacteria 12493
87 Ga0436361_0020573 3300039447 Bacteria 3308
88 Ga0436361_0395753 3300039447 Bacteria 51878
89 Ga0436361_0870111 3300039447 Bacteria 7519
90 Ga0436361_0949029 3300039447 Bacteria 3073
91 Ga0436363_0758948 3300039450 Bacteria 3007
92 Ga0436362_0807759 3300039453 Bacteria 7331
93 Ga0439446_0004431 3300042156 Bacteria 3560
94 Ga0451577_0020746 3300042876 Bacteria 6023
95 Ga0466966_0005098 3300044684 Bacteria 8634
96 Ga0451576_0026177 3300045051 Bacteria 6275
97 Ga0466967_0023620 3300045976 Bacteria 5043
98 Ga0495582_0004625 3300046473 Bacteria 7730
99 Ga0495620_0016290 3300046515 Bacteria 3734
100 Ga0495644_0033517 3300046523 Unclassified 1940
101 Ga0495667_0015656 3300046559 Bacteria 5127
102 Ga0495635_0002676 3300046663 Bacteria 12172
103 Ga0495659_0000105 3300046664 Bacteria 37228
104 Ga0495658_0001260 3300046683 Bacteria 13300
105 Ga0495589_0026799 3300046794 Bacteria 2919
106 Ga0495604_0058019 3300047317 Bacteria 2974
107 Ga0495674_0008913 3300047319 Bacteria 9543
108 Ga0495672_0005462 3300047320 Bacteria 10082
109 Ga0495676_0050552 3300047321 Bacteria 3333
110 Ga0495680_0017145 3300047322 Bacteria 6196
111 Ga0496100_0002124 3300048903 Bacteria 9985
112 Ga0496102_0003961 3300048905 Bacteria 12558
113 Ga0496105_0062189 3300048908 Bacteria 3081
114 Ga0496107_0000589 3300048910 Bacteria 20289
115 Ga0496108_0031486 3300048911 Bacteria 4402
116 Ga0496109_0008179 3300048912 Bacteria 8873
117 Ga0496110_0007513 3300048913 Bacteria 8708
118 Ga0496110_0053358 3300048913 Bacteria 3554
119 Ga0496111_0009927 3300048914 Bacteria 6364
120 Ga0496111_0016323 3300048914 Bacteria 5115
121 Ga0496114_0001310 3300048917 Bacteria 18849
122 Ga0496115_0002558 3300048918 Bacteria 13065
123 Ga0496116_0006010 3300048919 Bacteria 11118
124 Ga0496116_0017696 3300048919 Bacteria 5522
125 Ga0496116_0061384 3300048919 Bacteria 2433
126 Ga0496117_0001272 3300048920 Bacteria 37412
127 Ga0496117_0113967 3300048920 Bacteria 1677
128 Ga0496119_0000003 3300048922 Bacteria 550563
129 Ga0496119_0050663 3300048922 Bacteria 2557
130 Ga0496120_0000001 3300048923 Bacteria 630849
131 Ga0496120_0000312 3300048923 Bacteria 80729
132 Ga0496120_0041686 3300048923 Bacteria 2686
133 Ga0496122_0000015 3300048925 Bacteria 489028
134 Ga0496122_0000405 3300048925 Bacteria 91542
135 Ga0496122_0001514 3300048925 Bacteria 37045
136 Ga0496123_0001290 3300048926 Bacteria 35743
137 Ga0496123_0003797 3300048926 Bacteria 16538
138 Ga0496125_0000057 3300048928 Bacteria 266453
139 Ga0496126_0000008 3300048929 Bacteria 781752
140 Ga0496126_0000126 3300048929 Bacteria 178383
141 Ga0496126_0000194 3300048929 Bacteria 136093
142 Ga0496126_0004307 3300048929 Bacteria 17084
143 Ga0496126_0018332 3300048929 Bacteria 6939
144 Ga0496126_0026509 3300048929 Bacteria 5557
145 Ga0501031_0029184 3300049568 Bacteria 3598
146 Ga0501036_0052356 3300049572 Bacteria 3457
147 Ga0501036_0085337 3300049572 Bacteria 2669
148 Ga0501038_0052270 3300049574 Bacteria 3523
149 Ga0501038_0061751 3300049574 Bacteria 3204
150 Ga0501048_0005423 3300049582 Bacteria 9698
151 Ga0501068_0024358 3300049584 Bacteria 3554
152 Ga0501069_0002054 3300049585 Bacteria 10109
153 Ga0501072_0051830 3300049588 Bacteria 3231
154 Ga0501072_0062603 3300049588 Bacteria 2935
155 Ga0501073_0018761 3300049589 Bacteria 5001
156 Ga0501075_0055187 3300049591 Bacteria 2989
157 Ga0501076_0003188 3300049592 Bacteria 11444
158 Ga0501045_0003140 3300049824 Bacteria 11301
159 Ga0501045_0083787 3300049824 Bacteria 2352
160 nmdc:mga05p37_132510_c1 3300050507 Bacteria 3058
161 nmdc:mga08y16_115466_c1 3300050511 Bacteria 2795
162 nmdc:mga0n895_2732_c1 3300050512 Bacteria 13921
163 nmdc:mga0n895_65871_c1 3300050512 Bacteria 3587
164 nmdc:mga0rr50_76918_c1 3300050513 Bacteria 2563
165 nmdc:mga0a205_111417_c1 3300050515 Bacteria 2636
166 Ga0500616_0000083 3300053153 Bacteria 197344
167 Ga0501084_0054955 3300054114 Bacteria 3331
168 Ga0501082_0126755 3300060353 Bacteria 2214
169 2888580591 2888578766 Bacteria 6743310
170 2980126826 2980125574 Bacteria 5567337
171 8007375018 8007371054 Bacteria 4849201
172 8007377165 8007375930 Bacteria 4080554
173 8057477359 8057473075 Bacteria 5892720
174 8057737125 8057733483 Bacteria 6578323
175 Ga0070666_10000957
176 Ga0055541_1000683
177 Ga0070683_100046224
178 Ga0070670_100000393
179 Ga0070680_100080044
180 Ga0070660_100002377
181 Ga0070691_10006536
182 Ga0070688_100009201
183 Ga0070705_100016204
184 Ga0070694_100038797
185 Ga0070708_100077911
186 Ga0070699_100014318
187 Ga0070696_100000610
188 Ga0068855_100048243
189 Ga0068854_100047205
190 Ga0068859_100016860
191 Ga0068859_100047180
192 Ga0068866_10038927
193 Ga0068861_100052962
194 Ga0068851_10014319
195 Ga0081455_10046292
196 Ga0081538_10015384
197 Ga0081539_10008184
198 Ga0070712_100010749
199 Ga0075433_10001459
200 Ga0075434_100003230
201 Ga0068865_100013693
202 Ga0068865_100032281
203 Ga0097620_100016861
204 Ga0097620_100047179
205 Ga0079104_1000084
206 Ga0079104_1001388
207 Ga0079104_1004343
208 Ga0079104_1008937
209 Ga0075435_100009327
210 Ga0105240_10000028
211 Ga0111539_10002862
212 Ga0111539_10056754
213 Ga0111539_10066353
214 Ga0105248_10021162
215 Ga0105237_10000020
216 Ga0105239_10001433
217 Ga0157374_10059191
218 Ga0157372_10062046
219 Ga0157380_10130112
220 Ga0182008_10005010
221 Ga0157376_10072729
222 Ga0213872_10010809
223 Ga0213875_10000001
224 Ga0213875_10002825
225 Ga0213875_10006720
226 Ga0209258_101417
227 Ga0209025_1005490
228 Ga0207684_10016379
229 Ga0207695_10000088
230 Ga0207671_10000010
231 Ga0207693_10021525
232 Ga0207657_10007930
233 Ga0207659_10066664
234 Ga0207664_10003169
235 Ga0207664_10005785
236 Ga0207706_10016767
237 Ga0207669_10009923
238 Ga0207667_10003633
239 Ga0207667_10008595
240 Ga0207667_10080395
241 Ga0207703_10004906
242 Ga0207648_10068803
243 Ga0207675_100092878
244 Ga0209281_1000154
245 Ga0209281_1000187
246 Ga0207428_10049309
247 Ga0307515_10000019
248 Ga0265760_10001245
249 Ga0265325_10025448
250 Ga0265327_10019390
251 Ga0307416_100070857
252 Ga0395905_0000536
253 Ga0436364_0085967
254 Ga0436364_0273345
255 Ga0436364_0806947
256 Ga0436364_1130821
257 Ga0395901_0048836
258 Ga0436365_1254483
259 Ga0436360_0279557
260 Ga0436360_0797310
261 Ga0436361_0020573
262 Ga0436361_0395753
263 Ga0436361_0870111
264 Ga0436361_0949029
265 Ga0436363_0758948
266 Ga0436362_0807759
267 Ga0439446_0004431
268 Ga0451577_0020746
269 Ga0466966_0005098
270 Ga0451576_0026177
271 Ga0466967_0023620
272 Ga0495582_0004625
273 Ga0495620_0016290
274 Ga0495644_0033517
275 Ga0495667_0015656
276 Ga0495635_0002676
277 Ga0495659_0000105
278 Ga0495658_0001260
279 Ga0495589_0026799
280 Ga0495604_0058019
281 Ga0495674_0008913
282 Ga0495672_0005462
283 Ga0495676_0050552
284 Ga0495680_0017145
285 Ga0496100_0002124
286 Ga0496102_0003961
287 Ga0496105_0062189
288 Ga0496107_0000589
289 Ga0496108_0031486
290 Ga0496109_0008179
291 Ga0496110_0007513
292 Ga0496110_0053358
293 Ga0496111_0009927
294 Ga0496111_0016323
295 Ga0496114_0001310
296 Ga0496115_0002558
297 Ga0496116_0006010
298 Ga0496116_0017696
299 Ga0496116_0061384
300 Ga0496117_0001272
301 Ga0496117_0113967
302 Ga0496119_0000003
303 Ga0496119_0050663
304 Ga0496120_0000001
305 Ga0496120_0000312
306 Ga0496120_0041686
307 Ga0496122_0000015
308 Ga0496122_0000405
309 Ga0496122_0001514
310 Ga0496123_0001290
311 Ga0496123_0003797
312 Ga0496125_0000057
313 Ga0496126_0000008
314 Ga0496126_0000126
315 Ga0496126_0000194
316 Ga0496126_0004307
317 Ga0496126_0018332
318 Ga0496126_0026509
319 Ga0501031_0029184
320 Ga0501036_0052356
321 Ga0501036_0085337
322 Ga0501038_0052270
323 Ga0501038_0061751
324 Ga0501048_0005423
325 Ga0501068_0024358
326 Ga0501069_0002054
327 Ga0501072_0051830
328 Ga0501072_0062603
329 Ga0501073_0018761
330 Ga0501075_0055187
331 Ga0501076_0003188
332 Ga0501045_0003140
333 Ga0501045_0083787
334 nmdc:mga05p37_132510_c1
335 nmdc:mga08y16_115466_c1
336 nmdc:mga0n895_2732_c1
337 nmdc:mga0n895_65871_c1
338 nmdc:mga0rr50_76918_c1
339 nmdc:mga0a205_111417_c1
340 Ga0500616_0000083
341 Ga0501084_0054955
342 Ga0501082_0126755
343 2888580591
344 2980126826
345 8007375018
346 8007377165
347 8057477359
348 8057737125

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22920

UvrC_RNaseH

UvrC Ribonuclease H-like domain

259

374

0.99

PF14520

HHH_5

Helix-hairpin-helix domain

689

743

0.96

PF02151

UVR

UvrB/uvrC motif

211

246

0.93

PF01541

GIY-YIG

GIY-YIG catalytic domain

23

100

0.91

PF08459

UvrC_RNaseH_dom

UvrC RNAse H endonuclease domain

393

535

0.9

Map