F261118
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 172 | 132 | 340 | 588 |
Family's Representative Sequence
| Representative Sequence | 3300038742|Ga0400486_28452|Ga0400486_28452_4598_6661 |
| Length | 674 |
| Sequence | MMSRNQGGRPLTDSPMEGPVGSATADDPSARPWSGLAPRRTGADVAVTRERAPLAAWMWWRLLSGSPVGAPRLPSIDPMYLMTGVFLAVLVVVLLGTTIVAGRSPHVIFRPEQIDVRMDDVKGLAAVTEDVRRSLELFLAGRTFRRELGGTPRRGLLFEGPPGTGKTHMAKAMAAEAGVPFLFVSATSFQSMYYGATARKIRSYFAALRRAARAEGGAIGFIEEIDAIAITRGGMSSHGMTSSVSPELLGAGSVHAATVSEGVGGVVNELLIQMQSFDTPTGWQRVRGRATEAVNLLLPAHRQIPQPRPEPVDVLLIAATNRADNLDPALLRPGRFDRRLTFDLPDKAGRRELVDHFLGRKAHAGELDDPERRDALAGITQGYAPVAIEHLLDEALVHAVRRGDTRMTWGDIERARLVTEVGLGQPVGYTEHEKRLIATHEAGHAVLAWLLAPRRRLEILTIVKRSQALGLLAHGDRDDVYTRSREELLALIGISFGGQVAEELFFGDVSTGPGGDLHYATTVAAQMVGQAGMGGTVISFAAAQGSAFGDNLVARVLADSQGRRMMEELLTDQRELALGVLSANRDLVAALRDALMDRHELIGSEITEVLEAAVRRRPVPEDVTDGITTVIDIRGPRSPETIRDTPIGDPVPGPDPADPFQHRRHLHDVADVDD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 6 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 14 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 15 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 16 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 17 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 18 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 19 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 20 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 21 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 22 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 23 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 24 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 25 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 38 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 39 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 61 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 62 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 63 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 64 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 65 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 66 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 67 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 68 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 69 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 70 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 71 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 72 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 73 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 74 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 75 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 76 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 77 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 78 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 79 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 80 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 81 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 82 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 85 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 86 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 87 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 88 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 89 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 90 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 91 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 92 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 93 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 94 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 97 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 117 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 118 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 119 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 121 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 122 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 125 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 126 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 127 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 128 | 2643221694 | Cellulomonas sp. Root137 | Isolate | Unclassified |
| 129 | 2643221722 | Cellulomonas sp. Root930 | Isolate | Unclassified |
| 130 | 2728369276 | Kineococcus rhizosphaerae DSM 19711 | Isolate | Rhizosphere |
| 131 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 132 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.19 |
| Metatranscriptomes | 1.16 |
| Isolates | 4.65 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.14 |
| Nodule | 0 |
| Rhizoplane | 4.65 |
| Rhizosphere | 77.91 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.16 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0400486_28452 | 3300038742 | Bacteria | 9271 |
| 2 | Ga0070658_10001038 | 3300005327 | Bacteria | 23764 |
| 3 | Ga0070658_10006359 | 3300005327 | Bacteria | 9572 |
| 4 | Ga0068869_100041094 | 3300005334 | Bacteria | 3310 |
| 5 | Ga0070680_100000522 | 3300005336 | Bacteria | 26208 |
| 6 | Ga0068868_100003699 | 3300005338 | Bacteria | 10679 |
| 7 | Ga0070689_100078675 | 3300005340 | Bacteria | 2585 |
| 8 | Ga0070668_100084860 | 3300005347 | Bacteria | 2488 |
| 9 | Ga0070671_100047197 | 3300005355 | Bacteria | 3582 |
| 10 | Ga0070659_100000127 | 3300005366 | Bacteria | 57549 |
| 11 | Ga0070659_100002825 | 3300005366 | Bacteria | 12359 |
| 12 | Ga0070705_100058292 | 3300005440 | Bacteria | 2282 |
| 13 | Ga0070681_10000013 | 3300005458 | Bacteria | 135004 |
| 14 | Ga0070681_10016247 | 3300005458 | Bacteria | 7426 |
| 15 | Ga0070681_10177978 | 3300005458 | Bacteria | 2048 |
| 16 | Ga0070679_100000006 | 3300005530 | Bacteria | 203959 |
| 17 | Ga0068855_100009794 | 3300005563 | Bacteria | 11561 |
| 18 | Ga0068859_100064904 | 3300005617 | Bacteria | 3684 |
| 19 | Ga0068863_100061083 | 3300005841 | Bacteria | 3563 |
| 20 | Ga0068858_100000007 | 3300005842 | Bacteria | 247001 |
| 21 | Ga0068860_100013545 | 3300005843 | Bacteria | 7995 |
| 22 | Ga0081455_10000113 | 3300005937 | Bacteria | 92043 |
| 23 | Ga0081539_10001610 | 3300005985 | Bacteria | 37127 |
| 24 | Ga0075365_10004781 | 3300006038 | Bacteria | 7225 |
| 25 | Ga0075365_10007519 | 3300006038 | Bacteria | 6112 |
| 26 | Ga0075365_10022684 | 3300006038 | Bacteria | 3937 |
| 27 | Ga0075363_100008333 | 3300006048 | Bacteria | 4822 |
| 28 | Ga0075363_100017898 | 3300006048 | Bacteria | 3523 |
| 29 | Ga0075367_10011772 | 3300006178 | Bacteria | 4642 |
| 30 | Ga0075428_100000006 | 3300006844 | Bacteria | 288592 |
| 31 | Ga0068865_100040483 | 3300006881 | Bacteria | 3167 |
| 32 | Ga0097620_100064901 | 3300006931 | Bacteria | 3684 |
| 33 | Ga0105240_10016097 | 3300009093 | Bacteria | 10132 |
| 34 | Ga0105240_10063787 | 3300009093 | Bacteria | 4581 |
| 35 | Ga0105242_10017908 | 3300009176 | Bacteria | 5531 |
| 36 | Ga0105248_10001229 | 3300009177 | Bacteria | 28583 |
| 37 | Ga0105248_10183636 | 3300009177 | Bacteria | 2357 |
| 38 | Ga0105249_10162340 | 3300009553 | Bacteria | 2160 |
| 39 | Ga0157371_10021888 | 3300013102 | Bacteria | 4691 |
| 40 | Ga0157369_10001924 | 3300013105 | Bacteria | 25058 |
| 41 | Ga0157369_10003111 | 3300013105 | Bacteria | 19830 |
| 42 | Ga0157369_10032271 | 3300013105 | Bacteria | 5761 |
| 43 | Ga0157369_10096024 | 3300013105 | Bacteria | 3162 |
| 44 | Ga0163162_10025882 | 3300013306 | Bacteria | 5799 |
| 45 | Ga0157375_10041772 | 3300013308 | Bacteria | 4431 |
| 46 | Ga0163163_10013760 | 3300014325 | Bacteria | 7416 |
| 47 | Ga0157379_10000002 | 3300014968 | Bacteria | 179727 |
| 48 | Ga0157379_10000003 | 3300014968 | Bacteria | 174612 |
| 49 | Ga0157379_10032723 | 3300014968 | Bacteria | 4637 |
| 50 | Ga0157379_10054365 | 3300014968 | Bacteria | 3577 |
| 51 | Ga0157379_10159588 | 3300014968 | Bacteria | 2035 |
| 52 | Ga0163161_10027932 | 3300017792 | Bacteria | 4004 |
| 53 | Ga0206350_10040263 | 3300020080 | Unclassified | 2739 |
| 54 | Ga0224712_10004977 | 3300022467 | Bacteria | 3649 |
| 55 | Ga0207705_10011224 | 3300025909 | Bacteria | 6493 |
| 56 | Ga0207705_10044190 | 3300025909 | Bacteria | 3201 |
| 57 | Ga0207707_10000101 | 3300025912 | Bacteria | 85659 |
| 58 | Ga0207707_10144157 | 3300025912 | Bacteria | 2082 |
| 59 | Ga0207671_10049335 | 3300025914 | Bacteria | 3116 |
| 60 | Ga0207660_10000205 | 3300025917 | Bacteria | 37703 |
| 61 | Ga0207662_10018778 | 3300025918 | Bacteria | 3927 |
| 62 | Ga0207657_10044890 | 3300025919 | Bacteria | 3882 |
| 63 | Ga0207652_10000012 | 3300025921 | Bacteria | 235382 |
| 64 | Ga0207652_10091705 | 3300025921 | Bacteria | 2672 |
| 65 | Ga0207687_10107410 | 3300025927 | Bacteria | 2065 |
| 66 | Ga0207644_10012738 | 3300025931 | Bacteria | 5592 |
| 67 | Ga0207690_10002150 | 3300025932 | Bacteria | 12063 |
| 68 | Ga0207709_10084644 | 3300025935 | Bacteria | 2054 |
| 69 | Ga0207689_10053666 | 3300025942 | Bacteria | 3321 |
| 70 | Ga0207712_10096390 | 3300025961 | Bacteria | 2189 |
| 71 | Ga0207677_10003393 | 3300026023 | Bacteria | 8434 |
| 72 | Ga0207677_10009100 | 3300026023 | Bacteria | 5575 |
| 73 | Ga0207703_10000001 | 3300026035 | Bacteria | 822925 |
| 74 | Ga0207703_10023738 | 3300026035 | Bacteria | 4824 |
| 75 | Ga0207708_10029090 | 3300026075 | Unclassified | 4185 |
| 76 | Ga0207702_10130607 | 3300026078 | Bacteria | 2260 |
| 77 | Ga0207641_10122941 | 3300026088 | Bacteria | 2319 |
| 78 | Ga0207648_10000822 | 3300026089 | Bacteria | 35076 |
| 79 | Ga0207675_100019844 | 3300026118 | Bacteria | 6272 |
| 80 | Ga0207675_100183582 | 3300026118 | Bacteria | 2004 |
| 81 | Ga0268264_10057961 | 3300028381 | Bacteria | 3241 |
| 82 | Ga0265340_10006882 | 3300031247 | Bacteria | 6219 |
| 83 | Ga0307513_10000513 | 3300031456 | Bacteria | 55719 |
| 84 | Ga0316579_10001163 | 3300031691 | Bacteria | 9362 |
| 85 | Ga0316576_10003474 | 3300031727 | Bacteria | 9243 |
| 86 | Ga0316576_10016093 | 3300031727 | Bacteria | 5042 |
| 87 | Ga0316576_10065228 | 3300031727 | Bacteria | 2676 |
| 88 | Ga0316578_10051751 | 3300031728 | Bacteria | 2405 |
| 89 | Ga0307416_100061040 | 3300032002 | Bacteria | 3074 |
| 90 | Ga0307414_10063658 | 3300032004 | Bacteria | 2622 |
| 91 | Ga0316574_0001131 | 3300035398 | Bacteria | 12250 |
| 92 | Ga0316574_0043105 | 3300035398 | Bacteria | 2787 |
| 93 | Ga0316574_0058059 | 3300035398 | Bacteria | 2424 |
| 94 | Ga0373927_0035240 | 3300035695 | Bacteria | 3255 |
| 95 | Ga0373947_0037195 | 3300035725 | Bacteria | 2888 |
| 96 | Ga0316584_0010675 | 3300036712 | Bacteria | 6430 |
| 97 | Ga0316584_0026279 | 3300036712 | Bacteria | 4278 |
| 98 | Ga0400485_16941 | 3300038735 | Bacteria | 16220 |
| 99 | Ga0400488_19802 | 3300038741 | Bacteria | 4690 |
| 100 | Ga0436363_0682019 | 3300039450 | Bacteria | 1843 |
| 101 | Ga0451841_1406351 | 3300041498 | Bacteria | 2346 |
| 102 | Ga0451843_0635585 | 3300041509 | Bacteria | 1898 |
| 103 | Ga0451577_0051845 | 3300042876 | Bacteria | 3663 |
| 104 | Ga0466966_0025478 | 3300044684 | Bacteria | 3863 |
| 105 | Ga0466961_0017384 | 3300044693 | Bacteria | 4619 |
| 106 | Ga0466964_0025449 | 3300044706 | Bacteria | 2311 |
| 107 | Ga0453684_0064027 | 3300044712 | Bacteria | 4699 |
| 108 | Ga0466958_0003436 | 3300045836 | Bacteria | 8220 |
| 109 | Ga0495585_0030195 | 3300046492 | Bacteria | 3083 |
| 110 | Ga0495659_0003303 | 3300046664 | Bacteria | 5172 |
| 111 | Ga0496104_0040185 | 3300048907 | Bacteria | 4384 |
| 112 | Ga0496104_0065292 | 3300048907 | Bacteria | 3453 |
| 113 | Ga0496107_0017266 | 3300048910 | Bacteria | 5075 |
| 114 | Ga0496109_0001172 | 3300048912 | Bacteria | 21798 |
| 115 | Ga0496110_0024067 | 3300048913 | Bacteria | 5189 |
| 116 | Ga0496111_0059450 | 3300048914 | Bacteria | 2769 |
| 117 | Ga0496112_0005079 | 3300048915 | Bacteria | 11311 |
| 118 | Ga0496114_0071459 | 3300048917 | Bacteria | 2917 |
| 119 | Ga0496122_0002420 | 3300048925 | Bacteria | 26559 |
| 120 | Ga0496125_0000227 | 3300048928 | Bacteria | 115226 |
| 121 | Ga0496126_0000048 | 3300048929 | Bacteria | 317977 |
| 122 | Ga0501031_0000374 | 3300049568 | Bacteria | 26230 |
| 123 | Ga0501031_0003853 | 3300049568 | Bacteria | 9648 |
| 124 | Ga0501032_0026208 | 3300049569 | Bacteria | 4013 |
| 125 | Ga0501034_0022339 | 3300049571 | Bacteria | 6448 |
| 126 | Ga0501038_0000122 | 3300049574 | Bacteria | 65832 |
| 127 | Ga0501038_0004089 | 3300049574 | Bacteria | 13572 |
| 128 | Ga0501039_0000529 | 3300049575 | Bacteria | 27652 |
| 129 | Ga0501040_0000036 | 3300049576 | Bacteria | 60482 |
| 130 | Ga0501041_0000217 | 3300049577 | Bacteria | 26775 |
| 131 | Ga0501041_0011332 | 3300049577 | Bacteria | 5268 |
| 132 | Ga0501046_0000198 | 3300049580 | Bacteria | 62154 |
| 133 | Ga0501047_0004480 | 3300049581 | Bacteria | 13142 |
| 134 | Ga0501048_0000121 | 3300049582 | Bacteria | 45004 |
| 135 | Ga0501048_0068621 | 3300049582 | Bacteria | 2504 |
| 136 | Ga0501067_0033381 | 3300049583 | Bacteria | 2856 |
| 137 | Ga0501068_0014568 | 3300049584 | Bacteria | 4499 |
| 138 | Ga0501072_0012131 | 3300049588 | Bacteria | 6584 |
| 139 | Ga0501074_0005679 | 3300049590 | Bacteria | 8986 |
| 140 | Ga0501075_0002271 | 3300049591 | Bacteria | 12743 |
| 141 | Ga0501076_0000251 | 3300049592 | Bacteria | 32970 |
| 142 | Ga0501076_0018493 | 3300049592 | Bacteria | 5315 |
| 143 | Ga0501077_0002589 | 3300049593 | Bacteria | 10837 |
| 144 | Ga0501079_0000260 | 3300049741 | Bacteria | 32334 |
| 145 | Ga0501079_0034142 | 3300049741 | Bacteria | 3914 |
| 146 | Ga0501081_0000432 | 3300049743 | Bacteria | 23115 |
| 147 | Ga0501083_0030774 | 3300049744 | Bacteria | 3684 |
| 148 | Ga0501044_0062091 | 3300049823 | Bacteria | 3820 |
| 149 | Ga0501045_0000555 | 3300049824 | Bacteria | 23447 |
| 150 | Ga0501045_0043813 | 3300049824 | Bacteria | 3259 |
| 151 | nmdc:mga03n38_14114_c1 | 3300050490 | Bacteria | 3055 |
| 152 | nmdc:mga00v17_17717_c1 | 3300050491 | Bacteria | 4038 |
| 153 | nmdc:mga00v17_7204_c1 | 3300050491 | Bacteria | 5926 |
| 154 | nmdc:mga0yw44_2303_c1 | 3300050492 | Bacteria | 8075 |
| 155 | nmdc:mga0yw44_28048_c1 | 3300050492 | Bacteria | 3235 |
| 156 | nmdc:mga0rr50_92690_c1 | 3300050513 | Bacteria | 2355 |
| 157 | Ga0500643_005255 | 3300053087 | Bacteria | 5622 |
| 158 | Ga0500616_0000103 | 3300053153 | Bacteria | 162529 |
| 159 | Ga0500616_0002677 | 3300053153 | Bacteria | 14484 |
| 160 | Ga0501084_0036004 | 3300054114 | Bacteria | 4135 |
| 161 | Ga0501082_0000105 | 3300060353 | Bacteria | 66303 |
| 162 | Ga0530510_0001172 | 3300061734 | Bacteria | 17420 |
| 163 | 2644093498 | 2643221615 | Bacteria | 5487866 |
| 164 | 2644323108 | 2643221657 | Bacteria | 5490246 |
| 165 | 2644505531 | 2643221690 | Bacteria | 4654705 |
| 166 | 2644524656 | 2643221694 | Bacteria | 4392972 |
| 167 | 2644668742 | 2643221722 | Bacteria | 4247614 |
| 168 | 2729907060 | 2728369276 | Bacteria | 5610032 |
| 169 | 2812363664 | 2811994880 | Bacteria | 4147780 |
| 170 | 2884997102 | 2884994152 | Bacteria | 4492978 |
| 171 | Ga0400486_28452 | |||
| 172 | Ga0070658_10001038 | |||
| 173 | Ga0070658_10006359 | |||
| 174 | Ga0068869_100041094 | |||
| 175 | Ga0070680_100000522 | |||
| 176 | Ga0068868_100003699 | |||
| 177 | Ga0070689_100078675 | |||
| 178 | Ga0070668_100084860 | |||
| 179 | Ga0070671_100047197 | |||
| 180 | Ga0070659_100000127 | |||
| 181 | Ga0070659_100002825 | |||
| 182 | Ga0070705_100058292 | |||
| 183 | Ga0070681_10000013 | |||
| 184 | Ga0070681_10016247 | |||
| 185 | Ga0070681_10177978 | |||
| 186 | Ga0070679_100000006 | |||
| 187 | Ga0068855_100009794 | |||
| 188 | Ga0068859_100064904 | |||
| 189 | Ga0068863_100061083 | |||
| 190 | Ga0068858_100000007 | |||
| 191 | Ga0068860_100013545 | |||
| 192 | Ga0081455_10000113 | |||
| 193 | Ga0081539_10001610 | |||
| 194 | Ga0075365_10004781 | |||
| 195 | Ga0075365_10007519 | |||
| 196 | Ga0075365_10022684 | |||
| 197 | Ga0075363_100008333 | |||
| 198 | Ga0075363_100017898 | |||
| 199 | Ga0075367_10011772 | |||
| 200 | Ga0075428_100000006 | |||
| 201 | Ga0068865_100040483 | |||
| 202 | Ga0097620_100064901 | |||
| 203 | Ga0105240_10016097 | |||
| 204 | Ga0105240_10063787 | |||
| 205 | Ga0105242_10017908 | |||
| 206 | Ga0105248_10001229 | |||
| 207 | Ga0105248_10183636 | |||
| 208 | Ga0105249_10162340 | |||
| 209 | Ga0157371_10021888 | |||
| 210 | Ga0157369_10001924 | |||
| 211 | Ga0157369_10003111 | |||
| 212 | Ga0157369_10032271 | |||
| 213 | Ga0157369_10096024 | |||
| 214 | Ga0163162_10025882 | |||
| 215 | Ga0157375_10041772 | |||
| 216 | Ga0163163_10013760 | |||
| 217 | Ga0157379_10000002 | |||
| 218 | Ga0157379_10000003 | |||
| 219 | Ga0157379_10032723 | |||
| 220 | Ga0157379_10054365 | |||
| 221 | Ga0157379_10159588 | |||
| 222 | Ga0163161_10027932 | |||
| 223 | Ga0206350_10040263 | |||
| 224 | Ga0224712_10004977 | |||
| 225 | Ga0207705_10011224 | |||
| 226 | Ga0207705_10044190 | |||
| 227 | Ga0207707_10000101 | |||
| 228 | Ga0207707_10144157 | |||
| 229 | Ga0207671_10049335 | |||
| 230 | Ga0207660_10000205 | |||
| 231 | Ga0207662_10018778 | |||
| 232 | Ga0207657_10044890 | |||
| 233 | Ga0207652_10000012 | |||
| 234 | Ga0207652_10091705 | |||
| 235 | Ga0207687_10107410 | |||
| 236 | Ga0207644_10012738 | |||
| 237 | Ga0207690_10002150 | |||
| 238 | Ga0207709_10084644 | |||
| 239 | Ga0207689_10053666 | |||
| 240 | Ga0207712_10096390 | |||
| 241 | Ga0207677_10003393 | |||
| 242 | Ga0207677_10009100 | |||
| 243 | Ga0207703_10000001 | |||
| 244 | Ga0207703_10023738 | |||
| 245 | Ga0207708_10029090 | |||
| 246 | Ga0207702_10130607 | |||
| 247 | Ga0207641_10122941 | |||
| 248 | Ga0207648_10000822 | |||
| 249 | Ga0207675_100019844 | |||
| 250 | Ga0207675_100183582 | |||
| 251 | Ga0268264_10057961 | |||
| 252 | Ga0265340_10006882 | |||
| 253 | Ga0307513_10000513 | |||
| 254 | Ga0316579_10001163 | |||
| 255 | Ga0316576_10003474 | |||
| 256 | Ga0316576_10016093 | |||
| 257 | Ga0316576_10065228 | |||
| 258 | Ga0316578_10051751 | |||
| 259 | Ga0307416_100061040 | |||
| 260 | Ga0307414_10063658 | |||
| 261 | Ga0316574_0001131 | |||
| 262 | Ga0316574_0043105 | |||
| 263 | Ga0316574_0058059 | |||
| 264 | Ga0373927_0035240 | |||
| 265 | Ga0373947_0037195 | |||
| 266 | Ga0316584_0010675 | |||
| 267 | Ga0316584_0026279 | |||
| 268 | Ga0400485_16941 | |||
| 269 | Ga0400488_19802 | |||
| 270 | Ga0436363_0682019 | |||
| 271 | Ga0451841_1406351 | |||
| 272 | Ga0451843_0635585 | |||
| 273 | Ga0451577_0051845 | |||
| 274 | Ga0466966_0025478 | |||
| 275 | Ga0466961_0017384 | |||
| 276 | Ga0466964_0025449 | |||
| 277 | Ga0453684_0064027 | |||
| 278 | Ga0466958_0003436 | |||
| 279 | Ga0495585_0030195 | |||
| 280 | Ga0495659_0003303 | |||
| 281 | Ga0496104_0040185 | |||
| 282 | Ga0496104_0065292 | |||
| 283 | Ga0496107_0017266 | |||
| 284 | Ga0496109_0001172 | |||
| 285 | Ga0496110_0024067 | |||
| 286 | Ga0496111_0059450 | |||
| 287 | Ga0496112_0005079 | |||
| 288 | Ga0496114_0071459 | |||
| 289 | Ga0496122_0002420 | |||
| 290 | Ga0496125_0000227 | |||
| 291 | Ga0496126_0000048 | |||
| 292 | Ga0501031_0000374 | |||
| 293 | Ga0501031_0003853 | |||
| 294 | Ga0501032_0026208 | |||
| 295 | Ga0501034_0022339 | |||
| 296 | Ga0501038_0000122 | |||
| 297 | Ga0501038_0004089 | |||
| 298 | Ga0501039_0000529 | |||
| 299 | Ga0501040_0000036 | |||
| 300 | Ga0501041_0000217 | |||
| 301 | Ga0501041_0011332 | |||
| 302 | Ga0501046_0000198 | |||
| 303 | Ga0501047_0004480 | |||
| 304 | Ga0501048_0000121 | |||
| 305 | Ga0501048_0068621 | |||
| 306 | Ga0501067_0033381 | |||
| 307 | Ga0501068_0014568 | |||
| 308 | Ga0501072_0012131 | |||
| 309 | Ga0501074_0005679 | |||
| 310 | Ga0501075_0002271 | |||
| 311 | Ga0501076_0000251 | |||
| 312 | Ga0501076_0018493 | |||
| 313 | Ga0501077_0002589 | |||
| 314 | Ga0501079_0000260 | |||
| 315 | Ga0501079_0034142 | |||
| 316 | Ga0501081_0000432 | |||
| 317 | Ga0501083_0030774 | |||
| 318 | Ga0501044_0062091 | |||
| 319 | Ga0501045_0000555 | |||
| 320 | Ga0501045_0043813 | |||
| 321 | nmdc:mga03n38_14114_c1 | |||
| 322 | nmdc:mga00v17_17717_c1 | |||
| 323 | nmdc:mga00v17_7204_c1 | |||
| 324 | nmdc:mga0yw44_2303_c1 | |||
| 325 | nmdc:mga0yw44_28048_c1 | |||
| 326 | nmdc:mga0rr50_92690_c1 | |||
| 327 | Ga0500643_005255 | |||
| 328 | Ga0500616_0000103 | |||
| 329 | Ga0500616_0002677 | |||
| 330 | Ga0501084_0036004 | |||
| 331 | Ga0501082_0000105 | |||
| 332 | Ga0530510_0001172 | |||
| 333 | 2644093498 | |||
| 334 | 2644323108 | |||
| 335 | 2644505531 | |||
| 336 | 2644524656 | |||
| 337 | 2644668742 | |||
| 338 | 2729907060 | |||
| 339 | 2812363664 | |||
| 340 | 2884997102 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4jpo-assembly3.cif.gz_C | 5a resolution structure of proteasome assembly chaperone hsm3 in complex with a c-terminal fragment of rpt1 | 0.9362 | 316 | 386 |
| 4a3v-assembly2.cif.gz_D | yeast regulatory particle proteasome assembly chaperone hsm3 in complex with rpt1 c-terminal fragment | 0.9327 | 312 | 386 |
| 1iy2-assembly1.cif.gz_A | crystal structure of the ftsh atpase domain from thermus thermophilus | 0.9235 | 91 | 384 |
| 5ubv-assembly2.cif.gz_B | atpase domain of i-aaa protease from myceliophthora thermophila | 0.917 | 104 | 384 |
| 1iy2-assembly1.cif.gz_A | crystal structure of the ftsh atpase domain from thermus thermophilus | 0.9163 | 91 | 384 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0P0V4Q4_512_626_1.20.58.760 | Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Peptidase M41 | 0.9508 | 393 | 494 | 1.20.58.760 |
| af_P54813_417_488_1.10.8.60 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.942 | 314 | 384 | 1.10.8.60 |
| 3h4mB02 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9417 | 313 | 383 | 1.10.8.60 |
| 2yfwC00 | Mainly Alpha;Orthogonal Bundle;Histone, subunit A;Histone, subunit A | 0.9379 | 356 | 387 | 1.10.20.10 |
| 4ww0C02 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; | 0.9378 | 313 | 384 | 1.10.8.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A838HRI5-F1-model_v4 | AAA family ATPase | 0.9577 | 4 | 579 |
GO:0004176
GO:0004222 GO:0005524 GO:0005886 GO:0006508 GO:0016887 GO:0030163 |
| AF-D1JGG6-F1-model_v4 | Putative proteasome-activating nucleotidase | 0.9282 | 96 | 387 |
GO:0000502
GO:0005524 GO:0016887 |
| AF-A0A6A2WEC6-F1-model_v4 | 26S protease regulatory subunit 10B | 0.9241 | 105 | 380 |
GO:0000502
GO:0005524 GO:0005737 GO:0006508 GO:0008233 GO:0016757 GO:0016887 |
| AF-A0A7R9LTF0-F1-model_v4 | AAA+ ATPase domain-containing protein | 0.9238 | 103 | 359 |
GO:0000502
GO:0005524 GO:0005634 GO:0005737 GO:0016887 |
| AF-A0A7J8BV73-F1-model_v4 | Spermatogenesis associated 5 | 0.9237 | 104 | 386 |
GO:0005524
GO:0005737 GO:0016887 |