F259536
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 171 | 154 | 342 | 493 |
Family's Representative Sequence
| Representative Sequence | 3300049573|Ga0501037_0000019|Ga0501037_0000019_56087_57739 |
| Length | 533 |
| Sequence | VTRVRGDGGRGKEDGEARFDQGFRETERDSGLNRGGGSARTEGFRMSEKTAITPRRDEDFPEWYQQVVRAADLAENSEVRGCMVIKPWGYALWERMQAVLDGMFKATGHKNAYFPLFIPLSHLQKEADHVEGFATECAVVTHHRLEKTAEGKLVPAGALNEPLIVRPTSETIIGATYAKWVSSYRDLPILINQWANVVRWEMRPRLFLRTAEFLWQEGHTAHETEAEAVEETEKMLGVYETFARDYLAIPVLTGEKSESERFPGAVRTYCIEAMVQDRKAIQAGTSHFLGQNFAKASDIKFQGRDGQVQHAWTTSWGVSTRLIGTLIMAHGDDDGVIIPPRVAPSQVVILPITPKPETRAAVLEAAHKLAADLRAQHYHGEPVRVEIDERDLGGGVKSWEWIKKVALTRRDQPPKQKEFLPQFEAVNRVCTILDEIQASLLERATAFRDAQTKVIDSKEEFYAYFTAKNANKPEIHGGFALAHWNGSAEVEAKIKEDLKVTIRCIPFEANPEPGTCIFTGEPSRQRVVFAKSY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 2 | 3300001904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 | Metagenome | Rhizosphere |
| 3 | 3300001991 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 | Metagenome | Rhizosphere |
| 4 | 3300002126 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 | Metagenome | Rhizosphere |
| 5 | 3300002155 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 | Metagenome | Rhizosphere |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 9 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 10 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 30 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 31 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 32 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 34 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 35 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 36 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 37 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009978 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG | Metagenome | Rhizosphere |
| 44 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 51 | 3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 76 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 77 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 78 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 79 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 80 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 81 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 82 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 83 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 84 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 85 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 86 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 87 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 88 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 91 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 92 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 93 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 94 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 95 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 96 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 97 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 98 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 99 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 100 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 101 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 102 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 103 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 104 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 105 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 106 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 127 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 128 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 129 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 139 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 141 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 145 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 146 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 147 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 148 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 149 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 150 | 2599185354 | Sphingomonas sp. NFR15 | Isolate | Rhizoplane |
| 151 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 152 | 2775507255 | Sphingobium indicum B90A | Isolate | Rhizosphere |
| 153 | 2786546517 | Verrucomicrobia bacterium LW23 | Isolate | Rhizoplane |
| 154 | 2786546548 | Spartobacteria bacterium LR76 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.08 |
| Metatranscriptomes | 0 |
| Isolates | 2.92 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.51 |
| Nodule | 0 |
| Rhizoplane | 3.51 |
| Rhizosphere | 88.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.58 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501037_0000019 | 3300049573 | Bacteria | 155790 |
| 2 | JGI24736J21556_1002248 | 3300001904 | Bacteria | 3417 |
| 3 | JGI24743J22301_10000038 | 3300001991 | Bacteria | 11876 |
| 4 | JGI24035J26624_1001525 | 3300002126 | Bacteria | 2190 |
| 5 | JGI24033J26618_1000071 | 3300002155 | Bacteria | 14843 |
| 6 | rootH1_10024306 | 3300003323 | Bacteria | 5241 |
| 7 | Ga0065165_1000993 | 3300005262 | Bacteria | 35028 |
| 8 | Ga0065704_10004620 | 3300005289 | Bacteria | 6905 |
| 9 | Ga0065712_10092311 | 3300005290 | Bacteria | 2335 |
| 10 | Ga0065715_10001562 | 3300005293 | Bacteria | 6983 |
| 11 | Ga0070676_10014630 | 3300005328 | Bacteria | 4316 |
| 12 | Ga0070682_100075487 | 3300005337 | Bacteria | 2168 |
| 13 | Ga0070661_100000528 | 3300005344 | Bacteria | 29331 |
| 14 | Ga0070668_100001187 | 3300005347 | Bacteria | 18465 |
| 15 | Ga0070671_100091647 | 3300005355 | Bacteria | 2546 |
| 16 | Ga0070674_100104007 | 3300005356 | Bacteria | 2074 |
| 17 | Ga0070674_100126970 | 3300005356 | Bacteria | 1896 |
| 18 | Ga0070673_100017368 | 3300005364 | Bacteria | 5114 |
| 19 | Ga0070688_100047541 | 3300005365 | Bacteria | 2662 |
| 20 | Ga0070688_100077484 | 3300005365 | Bacteria | 2142 |
| 21 | Ga0070659_100006918 | 3300005366 | Bacteria | 8213 |
| 22 | Ga0070714_100000033 | 3300005435 | Bacteria | 131739 |
| 23 | Ga0070678_100002465 | 3300005456 | Bacteria | 10149 |
| 24 | Ga0070678_100030136 | 3300005456 | Bacteria | 3725 |
| 25 | Ga0070662_100003800 | 3300005457 | Bacteria | 9445 |
| 26 | Ga0070706_100001196 | 3300005467 | Bacteria | 27826 |
| 27 | Ga0070706_100035349 | 3300005467 | Bacteria | 4614 |
| 28 | Ga0070697_100010048 | 3300005536 | Bacteria | 7387 |
| 29 | Ga0070672_100000553 | 3300005543 | Bacteria | 22012 |
| 30 | Ga0070686_100031100 | 3300005544 | Bacteria | 3261 |
| 31 | Ga0070665_100022450 | 3300005548 | Bacteria | 6351 |
| 32 | Ga0068855_100000013 | 3300005563 | Bacteria | 234207 |
| 33 | Ga0068856_100000034 | 3300005614 | Bacteria | 124288 |
| 34 | Ga0081540_1000380 | 3300005983 | Bacteria | 44546 |
| 35 | Ga0081540_1007589 | 3300005983 | Bacteria | 7706 |
| 36 | Ga0081539_10000053 | 3300005985 | Bacteria | 264549 |
| 37 | Ga0070717_10005377 | 3300006028 | Bacteria | 9343 |
| 38 | Ga0070715_10019868 | 3300006163 | Bacteria | 2582 |
| 39 | Ga0070716_100033612 | 3300006173 | Bacteria | 2806 |
| 40 | Ga0075433_10011713 | 3300006852 | Bacteria | 7064 |
| 41 | Ga0075436_100091808 | 3300006914 | Bacteria | 2111 |
| 42 | Ga0105240_10000053 | 3300009093 | Bacteria | 225578 |
| 43 | Ga0111539_10005493 | 3300009094 | Bacteria | 16398 |
| 44 | Ga0105243_10000140 | 3300009148 | Bacteria | 82929 |
| 45 | Ga0105242_10089711 | 3300009176 | Bacteria | 2585 |
| 46 | Ga0105248_10000551 | 3300009177 | Bacteria | 42511 |
| 47 | Ga0105249_10120081 | 3300009553 | Bacteria | 2497 |
| 48 | Ga0105148_100097 | 3300009978 | Bacteria | 13747 |
| 49 | Ga0105239_10163366 | 3300010375 | Bacteria | 2489 |
| 50 | Ga0157374_10016072 | 3300013296 | Bacteria | 6576 |
| 51 | Ga0157378_10002768 | 3300013297 | Bacteria | 15621 |
| 52 | Ga0157378_10016255 | 3300013297 | Bacteria | 6516 |
| 53 | Ga0163162_10058128 | 3300013306 | Bacteria | 3895 |
| 54 | Ga0157376_10001159 | 3300014969 | Bacteria | 17345 |
| 55 | Ga0163161_10016665 | 3300017792 | Bacteria | 5134 |
| 56 | Ga0213873_10001787 | 3300021358 | Bacteria | 3624 |
| 57 | Ga0207666_1001517 | 3300025271 | Bacteria | 2737 |
| 58 | Ga0207697_10002696 | 3300025315 | Bacteria | 9076 |
| 59 | Ga0207688_10001727 | 3300025901 | Bacteria | 11596 |
| 60 | Ga0207688_10027732 | 3300025901 | Bacteria | 3115 |
| 61 | Ga0207699_10019624 | 3300025906 | Bacteria | 3609 |
| 62 | Ga0207645_10000574 | 3300025907 | Bacteria | 30472 |
| 63 | Ga0207684_10013836 | 3300025910 | Bacteria | 6968 |
| 64 | Ga0207695_10000239 | 3300025913 | Bacteria | 143850 |
| 65 | Ga0207663_10001149 | 3300025916 | Bacteria | 12214 |
| 66 | Ga0207663_10025781 | 3300025916 | Bacteria | 3404 |
| 67 | Ga0207649_10000385 | 3300025920 | Bacteria | 33024 |
| 68 | Ga0207659_10036629 | 3300025926 | Bacteria | 3400 |
| 69 | Ga0207664_10000024 | 3300025929 | Bacteria | 199974 |
| 70 | Ga0207690_10006078 | 3300025932 | Bacteria | 7152 |
| 71 | Ga0207706_10003684 | 3300025933 | Bacteria | 14623 |
| 72 | Ga0207709_10000706 | 3300025935 | Bacteria | 26909 |
| 73 | Ga0207669_10022624 | 3300025937 | Bacteria | 3342 |
| 74 | Ga0207665_10006694 | 3300025939 | Bacteria | 7648 |
| 75 | Ga0207691_10003715 | 3300025940 | Bacteria | 14809 |
| 76 | Ga0207711_10001244 | 3300025941 | Bacteria | 24169 |
| 77 | Ga0207667_10000227 | 3300025949 | Bacteria | 79027 |
| 78 | Ga0207651_10027129 | 3300025960 | Bacteria | 3592 |
| 79 | Ga0207668_10067952 | 3300025972 | Bacteria | 2532 |
| 80 | Ga0207702_10001213 | 3300026078 | Bacteria | 26152 |
| 81 | Ga0207641_10258698 | 3300026088 | Bacteria | 1629 |
| 82 | Ga0207683_10024446 | 3300026121 | Bacteria | 5204 |
| 83 | Ga0207683_10063069 | 3300026121 | Bacteria | 3264 |
| 84 | Ga0207428_10010621 | 3300027907 | Bacteria | 8213 |
| 85 | Ga0265338_10001947 | 3300028800 | Bacteria | 32225 |
| 86 | Ga0265338_10015111 | 3300028800 | Bacteria | 8517 |
| 87 | Ga0265316_10162742 | 3300031344 | Bacteria | 1668 |
| 88 | Ga0307508_10001918 | 3300031616 | Bacteria | 22828 |
| 89 | Ga0373934_0001494 | 3300035086 | Bacteria | 8582 |
| 90 | Ga0373936_0038638 | 3300035113 | Unclassified | 1909 |
| 91 | Ga0373953_0003057 | 3300035117 | Bacteria | 5138 |
| 92 | Ga0373954_0002054 | 3300035118 | Bacteria | 8366 |
| 93 | Ga0373956_0001656 | 3300035119 | Bacteria | 9170 |
| 94 | Ga0373957_0000034 | 3300035120 | Bacteria | 35486 |
| 95 | Ga0373955_0000242 | 3300035172 | Bacteria | 22523 |
| 96 | Ga0373927_0042608 | 3300035695 | Bacteria | 2941 |
| 97 | Ga0373933_0000230 | 3300035724 | Bacteria | 37223 |
| 98 | Ga0373937_0000010 | 3300036401 | Bacteria | 163001 |
| 99 | Ga0395899_0000032 | 3300037312 | Bacteria | 312705 |
| 100 | Ga0395898_0000562 | 3300037466 | Bacteria | 69459 |
| 101 | Ga0395905_0134475 | 3300037471 | Bacteria | 2326 |
| 102 | Ga0395901_0004231 | 3300038443 | Bacteria | 14470 |
| 103 | Ga0436365_1360704 | 3300039437 | Bacteria | 2412 |
| 104 | Ga0436365_1657382 | 3300039437 | Bacteria | 2144 |
| 105 | Ga0436363_0098428 | 3300039450 | Bacteria | 2496 |
| 106 | Ga0436362_0908481 | 3300039453 | Bacteria | 6490 |
| 107 | Ga0451807_0174714 | 3300041486 | Bacteria | 3451 |
| 108 | Ga0466972_0002887 | 3300044658 | Bacteria | 8506 |
| 109 | Ga0466965_0000419 | 3300044683 | Bacteria | 14678 |
| 110 | Ga0466964_0022802 | 3300044706 | Bacteria | 2431 |
| 111 | Ga0453684_0002277 | 3300044712 | Bacteria | 47332 |
| 112 | Ga0466971_0000033 | 3300044719 | Bacteria | 57483 |
| 113 | Ga0466968_0002265 | 3300044735 | Bacteria | 7030 |
| 114 | Ga0466957_0031112 | 3300044842 | Bacteria | 3188 |
| 115 | Ga0466957_0051111 | 3300044842 | Bacteria | 2515 |
| 116 | Ga0466960_0051543 | 3300044901 | Bacteria | 1988 |
| 117 | Ga0466967_0129032 | 3300045976 | Bacteria | 2345 |
| 118 | Ga0495592_0000225 | 3300046454 | Bacteria | 48726 |
| 119 | Ga0495638_0000481 | 3300046460 | Bacteria | 47890 |
| 120 | Ga0495651_0000166 | 3300046462 | Bacteria | 48436 |
| 121 | Ga0495580_0000810 | 3300046472 | Bacteria | 27074 |
| 122 | Ga0495608_0000292 | 3300046511 | Bacteria | 35120 |
| 123 | Ga0495608_0010049 | 3300046511 | Bacteria | 6601 |
| 124 | Ga0495628_0000535 | 3300046516 | Bacteria | 34786 |
| 125 | Ga0495632_0000989 | 3300046519 | Bacteria | 24804 |
| 126 | Ga0495652_0004330 | 3300046529 | Bacteria | 13595 |
| 127 | Ga0495587_0000294 | 3300046536 | Bacteria | 35500 |
| 128 | Ga0495667_0000064 | 3300046559 | Bacteria | 89628 |
| 129 | Ga0495634_0040199 | 3300046642 | Bacteria | 3182 |
| 130 | Ga0495657_0000009 | 3300046675 | Bacteria | 217555 |
| 131 | Ga0495599_0000179 | 3300046678 | Bacteria | 41497 |
| 132 | Ga0495623_0000190 | 3300046679 | Bacteria | 39055 |
| 133 | Ga0495646_0057088 | 3300046680 | Bacteria | 2338 |
| 134 | Ga0495604_0000245 | 3300047317 | Bacteria | 48436 |
| 135 | Ga0495680_0000921 | 3300047322 | Bacteria | 32669 |
| 136 | Ga0495675_0002834 | 3300047444 | Bacteria | 10385 |
| 137 | Ga0495602_0006731 | 3300048088 | Bacteria | 12058 |
| 138 | Ga0496108_0000156 | 3300048911 | Bacteria | 64810 |
| 139 | Ga0496110_0004566 | 3300048913 | Bacteria | 10755 |
| 140 | Ga0496115_0005081 | 3300048918 | Bacteria | 9565 |
| 141 | Ga0496125_0000153 | 3300048928 | Bacteria | 152777 |
| 142 | Ga0501031_0000366 | 3300049568 | Bacteria | 26360 |
| 143 | Ga0501032_0000058 | 3300049569 | Bacteria | 98163 |
| 144 | Ga0501033_0000001 | 3300049570 | Bacteria | 795921 |
| 145 | Ga0501033_0000376 | 3300049570 | Bacteria | 42813 |
| 146 | Ga0501038_0000136 | 3300049574 | Bacteria | 63470 |
| 147 | Ga0501039_0000857 | 3300049575 | Bacteria | 21993 |
| 148 | Ga0501043_0000625 | 3300049579 | Bacteria | 31229 |
| 149 | Ga0501043_0002115 | 3300049579 | Bacteria | 16938 |
| 150 | Ga0501047_0098949 | 3300049581 | Bacteria | 2795 |
| 151 | Ga0501067_0024486 | 3300049583 | Bacteria | 3348 |
| 152 | Ga0501073_0067240 | 3300049589 | Bacteria | 2498 |
| 153 | Ga0501083_0014675 | 3300049744 | Bacteria | 5477 |
| 154 | Ga0501035_0000004 | 3300049822 | Bacteria | 403650 |
| 155 | nmdc:mga08y16_1063_c1 | 3300050511 | Bacteria | 27032 |
| 156 | nmdc:mga08y16_312510_c1 | 3300050511 | Bacteria | 1618 |
| 157 | nmdc:mga0n895_78624_c1 | 3300050512 | Bacteria | 3283 |
| 158 | nmdc:mga0a205_8422_c1 | 3300050515 | Bacteria | 9385 |
| 159 | Ga0495595_0009153 | 3300053084 | Bacteria | 4092 |
| 160 | Ga0500643_023455 | 3300053087 | Bacteria | 1971 |
| 161 | Ga0500643_030937 | 3300053087 | Bacteria | 1636 |
| 162 | Ga0500555_000016 | 3300053103 | Bacteria | 203144 |
| 163 | Ga0500556_0002260 | 3300053104 | Bacteria | 6372 |
| 164 | Ga0500595_000009 | 3300053119 | Bacteria | 278382 |
| 165 | Ga0501084_0084603 | 3300054114 | Bacteria | 2663 |
| 166 | Ga0466962_0000025 | 3300061719 | Bacteria | 76266 |
| 167 | 2600204152 | 2599185354 | Bacteria | 4398675 |
| 168 | 2753765476 | 2751185897 | Bacteria | 5322941 |
| 169 | 2778124052 | 2775507255 | Bacteria | 3945731 |
| 170 | 2787438727 | 2786546517 | Bacteria | 6614109 |
| 171 | 2787507141 | 2786546548 | Bacteria | 4745694 |
| 172 | Ga0501037_0000019 | |||
| 173 | JGI24736J21556_1002248 | |||
| 174 | JGI24743J22301_10000038 | |||
| 175 | JGI24035J26624_1001525 | |||
| 176 | JGI24033J26618_1000071 | |||
| 177 | rootH1_10024306 | |||
| 178 | Ga0065165_1000993 | |||
| 179 | Ga0065704_10004620 | |||
| 180 | Ga0065712_10092311 | |||
| 181 | Ga0065715_10001562 | |||
| 182 | Ga0070676_10014630 | |||
| 183 | Ga0070682_100075487 | |||
| 184 | Ga0070661_100000528 | |||
| 185 | Ga0070668_100001187 | |||
| 186 | Ga0070671_100091647 | |||
| 187 | Ga0070674_100104007 | |||
| 188 | Ga0070674_100126970 | |||
| 189 | Ga0070673_100017368 | |||
| 190 | Ga0070688_100047541 | |||
| 191 | Ga0070688_100077484 | |||
| 192 | Ga0070659_100006918 | |||
| 193 | Ga0070714_100000033 | |||
| 194 | Ga0070678_100002465 | |||
| 195 | Ga0070678_100030136 | |||
| 196 | Ga0070662_100003800 | |||
| 197 | Ga0070706_100001196 | |||
| 198 | Ga0070706_100035349 | |||
| 199 | Ga0070697_100010048 | |||
| 200 | Ga0070672_100000553 | |||
| 201 | Ga0070686_100031100 | |||
| 202 | Ga0070665_100022450 | |||
| 203 | Ga0068855_100000013 | |||
| 204 | Ga0068856_100000034 | |||
| 205 | Ga0081540_1000380 | |||
| 206 | Ga0081540_1007589 | |||
| 207 | Ga0081539_10000053 | |||
| 208 | Ga0070717_10005377 | |||
| 209 | Ga0070715_10019868 | |||
| 210 | Ga0070716_100033612 | |||
| 211 | Ga0075433_10011713 | |||
| 212 | Ga0075436_100091808 | |||
| 213 | Ga0105240_10000053 | |||
| 214 | Ga0111539_10005493 | |||
| 215 | Ga0105243_10000140 | |||
| 216 | Ga0105242_10089711 | |||
| 217 | Ga0105248_10000551 | |||
| 218 | Ga0105249_10120081 | |||
| 219 | Ga0105148_100097 | |||
| 220 | Ga0105239_10163366 | |||
| 221 | Ga0157374_10016072 | |||
| 222 | Ga0157378_10002768 | |||
| 223 | Ga0157378_10016255 | |||
| 224 | Ga0163162_10058128 | |||
| 225 | Ga0157376_10001159 | |||
| 226 | Ga0163161_10016665 | |||
| 227 | Ga0213873_10001787 | |||
| 228 | Ga0207666_1001517 | |||
| 229 | Ga0207697_10002696 | |||
| 230 | Ga0207688_10001727 | |||
| 231 | Ga0207688_10027732 | |||
| 232 | Ga0207699_10019624 | |||
| 233 | Ga0207645_10000574 | |||
| 234 | Ga0207684_10013836 | |||
| 235 | Ga0207695_10000239 | |||
| 236 | Ga0207663_10001149 | |||
| 237 | Ga0207663_10025781 | |||
| 238 | Ga0207649_10000385 | |||
| 239 | Ga0207659_10036629 | |||
| 240 | Ga0207664_10000024 | |||
| 241 | Ga0207690_10006078 | |||
| 242 | Ga0207706_10003684 | |||
| 243 | Ga0207709_10000706 | |||
| 244 | Ga0207669_10022624 | |||
| 245 | Ga0207665_10006694 | |||
| 246 | Ga0207691_10003715 | |||
| 247 | Ga0207711_10001244 | |||
| 248 | Ga0207667_10000227 | |||
| 249 | Ga0207651_10027129 | |||
| 250 | Ga0207668_10067952 | |||
| 251 | Ga0207702_10001213 | |||
| 252 | Ga0207641_10258698 | |||
| 253 | Ga0207683_10024446 | |||
| 254 | Ga0207683_10063069 | |||
| 255 | Ga0207428_10010621 | |||
| 256 | Ga0265338_10001947 | |||
| 257 | Ga0265338_10015111 | |||
| 258 | Ga0265316_10162742 | |||
| 259 | Ga0307508_10001918 | |||
| 260 | Ga0373934_0001494 | |||
| 261 | Ga0373936_0038638 | |||
| 262 | Ga0373953_0003057 | |||
| 263 | Ga0373954_0002054 | |||
| 264 | Ga0373956_0001656 | |||
| 265 | Ga0373957_0000034 | |||
| 266 | Ga0373955_0000242 | |||
| 267 | Ga0373927_0042608 | |||
| 268 | Ga0373933_0000230 | |||
| 269 | Ga0373937_0000010 | |||
| 270 | Ga0395899_0000032 | |||
| 271 | Ga0395898_0000562 | |||
| 272 | Ga0395905_0134475 | |||
| 273 | Ga0395901_0004231 | |||
| 274 | Ga0436365_1360704 | |||
| 275 | Ga0436365_1657382 | |||
| 276 | Ga0436363_0098428 | |||
| 277 | Ga0436362_0908481 | |||
| 278 | Ga0451807_0174714 | |||
| 279 | Ga0466972_0002887 | |||
| 280 | Ga0466965_0000419 | |||
| 281 | Ga0466964_0022802 | |||
| 282 | Ga0453684_0002277 | |||
| 283 | Ga0466971_0000033 | |||
| 284 | Ga0466968_0002265 | |||
| 285 | Ga0466957_0031112 | |||
| 286 | Ga0466957_0051111 | |||
| 287 | Ga0466960_0051543 | |||
| 288 | Ga0466967_0129032 | |||
| 289 | Ga0495592_0000225 | |||
| 290 | Ga0495638_0000481 | |||
| 291 | Ga0495651_0000166 | |||
| 292 | Ga0495580_0000810 | |||
| 293 | Ga0495608_0000292 | |||
| 294 | Ga0495608_0010049 | |||
| 295 | Ga0495628_0000535 | |||
| 296 | Ga0495632_0000989 | |||
| 297 | Ga0495652_0004330 | |||
| 298 | Ga0495587_0000294 | |||
| 299 | Ga0495667_0000064 | |||
| 300 | Ga0495634_0040199 | |||
| 301 | Ga0495657_0000009 | |||
| 302 | Ga0495599_0000179 | |||
| 303 | Ga0495623_0000190 | |||
| 304 | Ga0495646_0057088 | |||
| 305 | Ga0495604_0000245 | |||
| 306 | Ga0495680_0000921 | |||
| 307 | Ga0495675_0002834 | |||
| 308 | Ga0495602_0006731 | |||
| 309 | Ga0496108_0000156 | |||
| 310 | Ga0496110_0004566 | |||
| 311 | Ga0496115_0005081 | |||
| 312 | Ga0496125_0000153 | |||
| 313 | Ga0501031_0000366 | |||
| 314 | Ga0501032_0000058 | |||
| 315 | Ga0501033_0000001 | |||
| 316 | Ga0501033_0000376 | |||
| 317 | Ga0501038_0000136 | |||
| 318 | Ga0501039_0000857 | |||
| 319 | Ga0501043_0000625 | |||
| 320 | Ga0501043_0002115 | |||
| 321 | Ga0501047_0098949 | |||
| 322 | Ga0501067_0024486 | |||
| 323 | Ga0501073_0067240 | |||
| 324 | Ga0501083_0014675 | |||
| 325 | Ga0501035_0000004 | |||
| 326 | nmdc:mga08y16_1063_c1 | |||
| 327 | nmdc:mga08y16_312510_c1 | |||
| 328 | nmdc:mga0n895_78624_c1 | |||
| 329 | nmdc:mga0a205_8422_c1 | |||
| 330 | Ga0495595_0009153 | |||
| 331 | Ga0500643_023455 | |||
| 332 | Ga0500643_030937 | |||
| 333 | Ga0500555_000016 | |||
| 334 | Ga0500556_0002260 | |||
| 335 | Ga0500595_000009 | |||
| 336 | Ga0501084_0084603 | |||
| 337 | Ga0466962_0000025 | |||
| 338 | 2600204152 | |||
| 339 | 2753765476 | |||
| 340 | 2778124052 | |||
| 341 | 2787438727 | |||
| 342 | 2787507141 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1hc7-assembly2.cif.gz_D | prolyl-trna synthetase from thermus thermophilus | 0.9167 | 20 | 520 |
| 1hc7-assembly2.cif.gz_D | prolyl-trna synthetase from thermus thermophilus | 0.9072 | 20 | 520 |
| 5xip-assembly2.cif.gz_D | crystal structure of eimeria tenella prolyl-trna synthetase (etprs) in complex with halofuginone | 0.9064 | 18 | 520 |
| 5xii-assembly2.cif.gz_B | crystal structure of toxoplasma gondii prolyl-trna synthetase (tgprs) in complex with inhibitor 6 | 0.9055 | 17 | 520 |
| 5xip-assembly2.cif.gz_D | crystal structure of eimeria tenella prolyl-trna synthetase (etprs) in complex with halofuginone | 0.9045 | 18 | 520 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6E223_207_318_3.30.930.10 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9707 | 196 | 302 | 3.30.930.10 |
| af_Q0D8E4_1_175_3.30.930.10 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9447 | 131 | 305 | 3.30.930.10 |
| af_Q0D8E4_1_175_3.30.930.10 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9395 | 131 | 305 | 3.30.930.10 |
| 1hc7A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain | 0.9334 | 306 | 421 | 3.40.50.800 |
| af_Q2QS11_308_428_3.40.50.800 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain | 0.9246 | 306 | 435 | 3.40.50.800 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A855K4B4-F1-model_v4 | Proline--tRNA ligase | 0.9997 | 201 | 282 |
GO:0004827
GO:0005524 GO:0005737 GO:0006433 GO:0017101 |
| AF-A0A7Z1N7Y9-F1-model_v4 | Proline--tRNA ligase | 0.9904 | 186 | 343 |
GO:0004827
GO:0005524 GO:0005737 GO:0006433 GO:0016740 GO:0017101 |
| AF-A0A4Q5T607-F1-model_v4 | proline--tRNA ligase (EC 6.1.1.15) | 0.9903 | 212 | 520 |
GO:0004827
GO:0005524 GO:0005737 GO:0006433 GO:0017101 |
| AF-A0A2G1YHE7-F1-model_v4 | Proline--tRNA ligase | 0.9833 | 336 | 520 |
GO:0004827
GO:0005524 GO:0005737 GO:0006433 |
| AF-A0A4Q5T607-F1-model_v4 | proline--tRNA ligase (EC 6.1.1.15) | 0.9808 | 212 | 520 |
GO:0004827
GO:0005524 GO:0005737 GO:0006433 GO:0017101 |