F259053

General Info

Members Datasets Scaffolds Average Seq Length
171 122 156 753

Family's Representative Sequence

Representative Sequence 3300031691|Ga0316579_10005193|Ga0316579_100051934
Length 895
Sequence MSSDHCVVLSTCPDAASAENIARVLLERQLAACINILPGVKSFYTWKGVCESGEEHLLLIKTLASAYPSLEQAILELHPYELPEIIAVPIAAGLPAYLTWITQNTAAPLSTTAAECKFRQGMRAFVSNDFPIDAMPLSAHRIALLPLRVWLIGLLWLWAGVAGAAGIDPKDLLSPQQAFQFSAQPIAADMVRVQWRIADGYYMYRDKINFKSDNPNVKLADPVFPTPTEIKNDEYFGKEAIYRGSLSVDIPVLRQRGTDALAFTLTATSQGCADAGVCFPPHPQQAALRLAAVAPPFATPQNEGGKGFFSALSDRLGLSDNKQKFLDPDQAFMYQAEATDPNHILARWQIAKGYYLYRKKFSFTLRDAKGISLGEYTLPTGVAKTDETFGHSEVYYNQMEVALPLQVGAGAAHNLTLVAHYQGCADAGLCYPPITKSTALSLVAATTAGAGSTAGPAPASTPFVSEQDRLAQSLVSGNRFLTILLFFGAGLLLAFTPCMFPMLPILSSIIVGQGPQVTTRKAFRLSLAYVLAMAVTYTFAGVLAGLFGANLQVAFQNPWIIGSFSVLFVVLALSMFGFYNLQIPSSWQTRISQISNRQKSGSLVGAAIMGILSALIVGPCLAAPLAAALIVIGQSGNAVLGGSALFALSLGMGVPLLAIGTSAGKWLPKASGWMDAVKSIFGVLLLALAVWMLDRIIPPQATLALIYMGALERLQTEAGGWQKLWKGLGFVMLIYGGAMLLGATSGGSNPLQPLRSLTLAGTHTASAEDGALKFIPVKGVQGLEQALYSASLSGKAVMLDFYADWCVSCKEMEHQTFSDPRVHKALEQAVLLQADVTANDADDQALLKRFGIFGPPSIMFFGTDGKERRAFRVVGYLSPEEFSAHIAQALSTRSL

Samples

Sample ID Description Type Environment
1 2643221559 Lysobacter sp. Root559 Isolate Unclassified
2 2643221573 Lysobacter sp. Root604 Isolate Unclassified
3 2643221586 Lysobacter sp. Root667 Isolate Unclassified
4 2643221612 Lysobacter sp. Root76 Isolate Unclassified
5 2643221720 Lysobacter sp. Root916 Isolate Unclassified
6 2643221727 Lysobacter sp. Root96 Isolate Unclassified
7 2643221728 Lysobacter sp. Root983 Isolate Unclassified
8 2855730933 Achromobacter sp. HZ28 Isolate Nodule
9 2855767633 Achromobacter sp. HZ34 Isolate Nodule
10 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
11 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
12 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
13 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
74 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
79 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
80 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
91 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
92 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
93 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
94 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
95 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
98 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
99 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
122 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 2.34
Isolates 8.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.77
Nodule 1.17
Rhizoplane 2.92
Rhizosphere 59.65
Stem 0
Stem Tuber 0
Unclassified 27.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055524_1012540 3300003775 Bacteria 3249
2 Ga0055536_1006016 3300003781 Bacteria 5759
3 Ga0055536_1008580 3300003781 Bacteria 4367
4 Ga0055531_10008181 3300003794 Bacteria 5569
5 Ga0065704_10071164 3300005289 Bacteria 12725
6 Ga0068869_100026664 3300005334 Bacteria 4023
7 Ga0068868_100048452 3300005338 Bacteria 3333
8 Ga0070661_100000733 3300005344 Bacteria 23934
9 Ga0070668_100015097 3300005347 Bacteria 5770
10 Ga0070671_100030175 3300005355 Bacteria 4474
11 Ga0070674_100038545 3300005356 Bacteria 3221
12 Ga0070667_100007079 3300005367 Bacteria 9322
13 Ga0070700_100037390 3300005441 Bacteria 2952
14 Ga0070681_10042986 3300005458 Bacteria 4527
15 Ga0068867_100029384 3300005459 Bacteria 3960
16 Ga0070665_100000028 3300005548 Bacteria 351357
17 Ga0068852_100028935 3300005616 Bacteria 4543
18 Ga0068859_100022858 3300005617 Bacteria 6269
19 Ga0068861_100038020 3300005719 Bacteria 3580
20 Ga0068863_100022007 3300005841 Bacteria 6085
21 Ga0068858_100015668 3300005842 Bacteria 7131
22 Ga0097621_100010942 3300006237 Bacteria 6662
23 Ga0068871_100003330 3300006358 Bacteria 11032
24 Ga0097620_100022857 3300006931 Bacteria 6269
25 Ga0105247_10016139 3300009101 Bacteria 4474
26 Ga0105241_10011141 3300009174 Bacteria 6592
27 Ga0105248_10052289 3300009177 Bacteria 4584
28 Ga0105237_10025771 3300009545 Bacteria 6013
29 Ga0105238_10007624 3300009551 Bacteria 10844
30 Ga0105239_10009493 3300010375 Bacteria 10958
31 Ga0105239_10106191 3300010375 Bacteria 3110
32 Ga0157369_10002712 3300013105 Bacteria 21129
33 Ga0157374_10028466 3300013296 Bacteria 5048
34 Ga0163162_10000061 3300013306 Bacteria 106351
35 Ga0157372_10001785 3300013307 Bacteria 23359
36 Ga0157375_10107191 3300013308 Bacteria 2887
37 Ga0163163_10000242 3300014325 Bacteria 55874
38 Ga0157376_10000655 3300014969 Bacteria 22363
39 Ga0157376_10025132 3300014969 Bacteria 4688
40 Ga0183360_10003 3300015689 Bacteria 713221
41 Ga0209676_1001358 3300025292 Bacteria 24174
42 Ga0209676_1003601 3300025292 Bacteria 9332
43 Ga0209676_1012633 3300025292 Bacteria 3300
44 Ga0209025_1007858 3300025294 Bacteria 7828
45 Ga0209256_1005733 3300025299 Bacteria 6964
46 Ga0209256_1006682 3300025299 Bacteria 5992
47 Ga0209256_1008485 3300025299 Bacteria 4753
48 Ga0209051_1007649 3300025303 Bacteria 5874
49 Ga0209257_1001439 3300025304 Bacteria 28102
50 Ga0209257_1002612 3300025304 Bacteria 17423
51 Ga0209257_1006821 3300025304 Bacteria 7175
52 Ga0207654_10001409 3300025911 Bacteria 12745
53 Ga0207654_10040814 3300025911 Bacteria 2617
54 Ga0207695_10000689 3300025913 Bacteria 66235
55 Ga0207671_10000694 3300025914 Bacteria 43541
56 Ga0207650_10054014 3300025925 Bacteria 2979
57 Ga0207644_10008463 3300025931 Bacteria 6734
58 Ga0207691_10006385 3300025940 Bacteria 11385
59 Ga0207689_10005273 3300025942 Bacteria 11584
60 Ga0207667_10022134 3300025949 Bacteria 7031
61 Ga0207658_10019054 3300025986 Bacteria 4746
62 Ga0207677_10014017 3300026023 Bacteria 4664
63 Ga0207708_10051040 3300026075 Bacteria 3149
64 Ga0207702_10002593 3300026078 Bacteria 16982
65 Ga0207675_100047899 3300026118 Bacteria 3990
66 Ga0207698_10018980 3300026142 Bacteria 4696
67 Ga0268266_10000017 3300028379 Bacteria 607272
68 Ga0265327_10009082 3300031251 Bacteria 7254
69 Ga0307508_10032857 3300031616 Bacteria 4685
70 Ga0316579_10001612 3300031691 Bacteria 8258
71 Ga0316579_10005193 3300031691 Bacteria 5238
72 Ga0316576_10030544 3300031727 Bacteria 3816
73 Ga0307516_10033134 3300031730 Bacteria 5200
74 Ga0307413_10004492 3300031824 Bacteria 6078
75 Ga0307416_100072475 3300032002 Bacteria 2867
76 Ga0316583_10002478 3300032133 Bacteria 6416
77 Ga0316583_10010593 3300032133 Bacteria 3325
78 Ga0316580_10005446 3300032139 Bacteria 3713
79 Ga0316593_10000236 3300032168 Bacteria 8941
80 Ga0316593_10004385 3300032168 Bacteria 3616
81 Ga0316588_1001395 3300033528 Bacteria 3943
82 Ga0316596_1004870 3300033541 Bacteria 3034
83 Ga0373952_0001155 3300035092 Bacteria 4808
84 Ga0316574_0001827 3300035398 Bacteria 10358
85 Ga0316574_0019614 3300035398 Bacteria 3991
86 Ga0316574_0032956 3300035398 Bacteria 3152
87 Ga0316574_0053188 3300035398 Bacteria 2527
88 Ga0316582_0000981 3300036647 Bacteria 11864
89 Ga0316582_0002188 3300036647 Bacteria 9076
90 Ga0316584_0004445 3300036712 Bacteria 9284
91 Ga0316584_0007614 3300036712 Bacteria 7428
92 Ga0316584_0010135 3300036712 Bacteria 6576
93 Ga0316584_0019659 3300036712 Bacteria 4883
94 Ga0316584_0043676 3300036712 Bacteria 3342
95 Ga0316584_0049757 3300036712 Bacteria 3133
96 Ga0316584_0053830 3300036712 Bacteria 3011
97 Ga0395898_0032036 3300037466 Bacteria 5247
98 Ga0395905_0013397 3300037471 Bacteria 7857
99 Ga0395901_0032307 3300038443 Bacteria 5401
100 Ga0400484_00828 3300038725 Bacteria 7594
101 Ga0400484_08350 3300038725 Bacteria 14326
102 Ga0400484_17400 3300038725 Bacteria 13866
103 Ga0400490_06774 3300038726 Bacteria 50396
104 Ga0400490_06868 3300038726 Bacteria 7517
105 Ga0400490_46623 3300038726 Bacteria 40858
106 Ga0400490_51674 3300038726 Bacteria 13581
107 Ga0400491_00165 3300038727 Bacteria 10798
108 Ga0400485_02751 3300038735 Bacteria 6659
109 Ga0400485_03454 3300038735 Bacteria 57964
110 Ga0400488_17366 3300038741 Bacteria 7312
111 Ga0400488_32560 3300038741 Bacteria 18325
112 Ga0400488_45143 3300038741 Bacteria 4348
113 Ga0400488_63615 3300038741 Bacteria 6209
114 Ga0400486_12030 3300038742 Bacteria 3790
115 Ga0400486_13457 3300038742 Bacteria 2699
116 Ga0400486_26998 3300038742 Bacteria 149082
117 Ga0400486_29681 3300038742 Bacteria 6608
118 Ga0400483_040007 3300039062 Bacteria 22073
119 Ga0400483_136496 3300039062 Bacteria 3237
120 Ga0400483_166114 3300039062 Bacteria 20294
121 Ga0400483_181858 3300039062 Bacteria 6446
122 Ga0400483_182151 3300039062 Bacteria 3714
123 Ga0400483_270997 3300039062 Bacteria 2911
124 Ga0400483_287904 3300039062 Bacteria 22043
125 Ga0400487_13124 3300039110 Bacteria 55255
126 Ga0400487_24528 3300039110 Bacteria 31998
127 Ga0400487_27950 3300039110 Bacteria 76746
128 Ga0400487_36214 3300039110 Bacteria 3735
129 Ga0400487_56079 3300039110 Bacteria 5470
130 Ga0400487_63535 3300039110 Bacteria 3112
131 Ga0439447_003879 3300041407 Bacteria 5245
132 Ga0439465_0001175 3300041413 Bacteria 8415
133 Ga0451577_0002427 3300042876 Bacteria 22220
134 Ga0453684_0006504 3300044712 Bacteria 22148
135 Ga0453684_0124705 3300044712 Bacteria 3102
136 Ga0453684_0131602 3300044712 Bacteria 3000
137 Ga0451576_0066603 3300045051 Bacteria 3749
138 Ga0495621_0001376 3300046539 Bacteria 6298
139 Ga0495656_0001608 3300046615 Bacteria 7395
140 Ga0495668_0002621 3300046616 Bacteria 14494
141 Ga0496101_0027641 3300048904 Bacteria 3954
142 Ga0496103_0060746 3300048906 Bacteria 2349
143 Ga0496108_0011701 3300048911 Bacteria 7138
144 Ga0496112_0035146 3300048915 Bacteria 4878
145 Ga0496113_0004261 3300048916 Bacteria 8762
146 Ga0496117_0042109 3300048920 Bacteria 3337
147 Ga0496118_0000576 3300048921 Bacteria 60656
148 Ga0496121_0004133 3300048924 Bacteria 19871
149 Ga0501033_0036109 3300049570 Bacteria 3704
150 Ga0501034_0000473 3300049571 Bacteria 66214
151 Ga0501034_0032809 3300049571 Bacteria 5272
152 Ga0501047_0029122 3300049581 Bacteria 5326
153 Ga0501079_0036874 3300049741 Bacteria 3766
154 Ga0501080_0009966 3300049742 Bacteria 8683
155 Ga0501035_0031325 3300049822 Bacteria 4844
156 Ga0501044_0079511 3300049823 Bacteria 3322

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031727 Ga0316576_10030544 Ga0316576_100305442 690
2 3300015689 Ga0183360_10003 Ga0183360_10003103 691
3 3300037466 Ga0395898_0032036 Ga0395898_0032036_875_3187 693
4 3300049581 Ga0501047_0029122 Ga0501047_0029122_2190_4433 695
5 3300049742 Ga0501080_0009966 Ga0501080_0009966_586_2829 695
6 3300005841 Ga0068863_100022007 Ga0068863_1000220071 696
7 3300014969 Ga0157376_10000655 Ga0157376_100006555 696
8 3300035092 Ga0373952_0001155 Ga0373952_0001155_566_2869 696
9 3300039110 Ga0400487_63535 Ga0400487_63535_56_2257 697
10 3300013306 Ga0163162_10000061 Ga0163162_1000006138 699
11 3300025911 Ga0207654_10001409 Ga0207654_100014099 700
12 3300032002 Ga0307416_100072475 Ga0307416_1000724752 700
13 3300005338 Ga0068868_100048452 Ga0068868_1000484522 702
14 3300005356 Ga0070674_100038545 Ga0070674_1000385451 702
15 3300005459 Ga0068867_100029384 Ga0068867_1000293844 702
16 3300026023 Ga0207677_10014017 Ga0207677_100140174 702
17 iso_pu_bacteria 2855767633 2855771340 702
18 3300005458 Ga0070681_10042986 Ga0070681_100429864 704
19 3300032168 Ga0316593_10000236 Ga0316593_100002365 704
20 3300032139 Ga0316580_10005446 Ga0316580_100054462 705
21 3300036712 Ga0316584_0019659 Ga0316584_0019659_92_2377 705
22 3300010375 Ga0105239_10009493 Ga0105239_100094938 706
23 iso_pu_bacteria 2855730933 2855735557 706
24 3300014325 Ga0163163_10000242 Ga0163163_1000024210 708
25 3300005441 Ga0070700_100037390 Ga0070700_1000373901 709
26 3300005719 Ga0068861_100038020 Ga0068861_1000380203 709
27 3300026075 Ga0207708_10051040 Ga0207708_100510403 709
28 3300026118 Ga0207675_100047899 Ga0207675_1000478993 709
29 3300049570 Ga0501033_0036109 Ga0501033_0036109_1156_3660 709
30 3300005347 Ga0070668_100015097 Ga0070668_1000150977 710
31 3300031730 Ga0307516_10033134 Ga0307516_100331345 710
32 3300036712 Ga0316584_0053830 Ga0316584_0053830_420_2852 710
33 3300049571 Ga0501034_0000473 Ga0501034_0000473_23193_25679 710
34 3300031616 Ga0307508_10032857 Ga0307508_100328572 712
35 3300037471 Ga0395905_0013397 Ga0395905_0013397_4726_7038 712
36 3300038443 Ga0395901_0032307 Ga0395901_0032307_1260_3572 712
37 3300044712 Ga0453684_0131602 Ga0453684_0131602_680_2986 713
38 3300045051 Ga0451576_0066603 Ga0451576_0066603_477_2783 713
39 3300046539 Ga0495621_0001376 Ga0495621_0001376_2026_4257 714
40 3300036712 Ga0316584_0010135 Ga0316584_0010135_58_2589 715
41 3300005617 Ga0068859_100022858 Ga0068859_1000228583 716
42 3300006931 Ga0097620_100022857 Ga0097620_1000228575 716
43 3300049571 Ga0501034_0032809 Ga0501034_0032809_1979_4216 716
44 3300049741 Ga0501079_0036874 Ga0501079_0036874_800_3037 716
45 3300049823 Ga0501044_0079511 Ga0501044_0079511_267_2768 716
46 3300048924 Ga0496121_0004133 Ga0496121_0004133_3834_6458 717
47 3300005548 Ga0070665_100000028 Ga0070665_100000028139 718
48 3300025986 Ga0207658_10019054 Ga0207658_100190543 718
49 3300028379 Ga0268266_10000017 Ga0268266_10000017283 718
50 3300035398 Ga0316574_0001827 Ga0316574_0001827_5396_7597 718
51 3300031824 Ga0307413_10004492 Ga0307413_100044925 719
52 3300038741 Ga0400488_17366 Ga0400488_17366_1496_3802 719
53 3300044712 Ga0453684_0124705 Ga0453684_0124705_817_3042 719
54 3300025925 Ga0207650_10054014 Ga0207650_100540142 720
55 3300038726 Ga0400490_06774 Ga0400490_06774_13316_15622 720
56 3300038727 Ga0400491_00165 Ga0400491_00165_1316_3622 720
57 3300049822 Ga0501035_0031325 Ga0501035_0031325_838_3339 720
58 3300005355 Ga0070671_100030175 Ga0070671_1000301754 721
59 3300025931 Ga0207644_10008463 Ga0207644_100084633 721
60 3300042876 Ga0451577_0002427 Ga0451577_0002427_7968_10199 721
61 3300044712 Ga0453684_0006504 Ga0453684_0006504_7979_10210 721
62 3300048920 Ga0496117_0042109 Ga0496117_0042109_538_2886 721
63 3300048921 Ga0496118_0000576 Ga0496118_0000576_56663_59011 721
64 3300009551 Ga0105238_10007624 Ga0105238_100076248 722
65 3300038735 Ga0400485_03454 Ga0400485_03454_4767_7052 722
66 3300038742 Ga0400486_26998 Ga0400486_26998_4702_6987 722
67 3300039062 Ga0400483_287904 Ga0400483_287904_977_3259 722
68 iso_pu_bacteria 2894510363 2894510547 722
69 iso_pu_bacteria 8001522603 8001524849 722
70 3300005344 Ga0070661_100000733 Ga0070661_10000073319 723
71 3300005616 Ga0068852_100028935 Ga0068852_1000289354 723
72 3300009174 Ga0105241_10011141 Ga0105241_100111414 723
73 3300009545 Ga0105237_10025771 Ga0105237_100257714 723
74 3300013105 Ga0157369_10002712 Ga0157369_1000271212 723
75 3300013307 Ga0157372_10001785 Ga0157372_1000178520 723
76 3300025911 Ga0207654_10040814 Ga0207654_100408142 723
77 3300025913 Ga0207695_10000689 Ga0207695_1000068916 723
78 3300025914 Ga0207671_10000694 Ga0207671_1000069422 723
79 3300025949 Ga0207667_10022134 Ga0207667_100221347 723
80 3300026078 Ga0207702_10002593 Ga0207702_100025934 723
81 3300026142 Ga0207698_10018980 Ga0207698_100189804 723
82 3300038742 Ga0400486_12030 Ga0400486_12030_1476_3764 723
83 3300005367 Ga0070667_100007079 Ga0070667_1000070793 724
84 3300048904 Ga0496101_0027641 Ga0496101_0027641_1124_3454 724
85 3300048906 Ga0496103_0060746 Ga0496103_0060746_35_2248 724
86 3300048911 Ga0496108_0011701 Ga0496108_0011701_2841_5171 724
87 3300048915 Ga0496112_0035146 Ga0496112_0035146_1956_4286 724
88 3300048916 Ga0496113_0004261 Ga0496113_0004261_4651_6981 724
89 3300035398 Ga0316574_0053188 Ga0316574_0053188_194_2461 725
90 3300038741 Ga0400488_45143 Ga0400488_45143_1593_3887 725
91 3300039062 Ga0400483_270997 Ga0400483_270997_601_2895 725
92 3300038725 Ga0400484_00828 Ga0400484_00828_2093_4387 726
93 iso_pu_bacteria 2989392574 2989393964 727
94 3300031691 Ga0316579_10001612 Ga0316579_100016125 728
95 3300032133 Ga0316583_10002478 Ga0316583_100024781 728
96 3300032133 Ga0316583_10010593 Ga0316583_100105933 728
97 3300036647 Ga0316582_0002188 Ga0316582_0002188_2342_4693 728
98 3300036712 Ga0316584_0004445 Ga0316584_0004445_5504_7855 728
99 3300031251 Ga0265327_10009082 Ga0265327_100090826 731
100 3300009101 Ga0105247_10016139 Ga0105247_100161393 732
101 3300009177 Ga0105248_10052289 Ga0105248_100522892 732
102 3300010375 Ga0105239_10106191 Ga0105239_101061913 732
103 3300013296 Ga0157374_10028466 Ga0157374_100284663 732
104 3300013308 Ga0157375_10107191 Ga0157375_101071913 732
105 3300014969 Ga0157376_10025132 Ga0157376_100251323 732
106 3300033541 Ga0316596_1004870 Ga0316596_10048702 732
107 3300035398 Ga0316574_0032956 Ga0316574_0032956_118_2472 732
108 3300036712 Ga0316584_0043676 Ga0316584_0043676_531_2885 732
109 3300025940 Ga0207691_10006385 Ga0207691_100063858 733
110 3300039110 Ga0400487_56079 Ga0400487_56079_1793_4099 733
111 3300038725 Ga0400484_08350 Ga0400484_08350_2076_4379 734
112 3300039110 Ga0400487_13124 Ga0400487_13124_25125_27458 734
113 3300035398 Ga0316574_0019614 Ga0316574_0019614_606_2924 735
114 3300039110 Ga0400487_24528 Ga0400487_24528_19004_21277 735
115 3300031691 Ga0316579_10005193 Ga0316579_100051934 736
116 3300038725 Ga0400484_17400 Ga0400484_17400_2540_4852 736
117 3300041413 Ga0439465_0001175 Ga0439465_0001175_3329_5743 736
118 3300038735 Ga0400485_02751 Ga0400485_02751_3827_6112 737
119 3300038742 Ga0400486_29681 Ga0400486_29681_619_2904 737
120 3300039110 Ga0400487_36214 Ga0400487_36214_134_2419 737
121 3300041407 Ga0439447_003879 Ga0439447_003879_2623_5190 737
122 3300032168 Ga0316593_10004385 Ga0316593_100043852 738
123 3300036712 Ga0316584_0007614 Ga0316584_0007614_4620_7010 738
124 3300038742 Ga0400486_13457 Ga0400486_13457_54_2339 739
125 3300039062 Ga0400483_181858 Ga0400483_181858_2221_4497 739
126 3300005289 Ga0065704_10071164 Ga0065704_100711644 740
127 3300038726 Ga0400490_06868 Ga0400490_06868_3405_5708 740
128 3300038726 Ga0400490_51674 Ga0400490_51674_8546_10849 740
129 3300046615 Ga0495656_0001608 Ga0495656_0001608_2105_4531 742
130 3300038726 Ga0400490_46623 Ga0400490_46623_7061_9358 743
131 3300038741 Ga0400488_32560 Ga0400488_32560_13733_16033 743
132 3300039062 Ga0400483_136496 Ga0400483_136496_696_2993 743
133 3300039062 Ga0400483_182151 Ga0400483_182151_594_2891 743
134 3300005334 Ga0068869_100026664 Ga0068869_1000266641 744
135 3300005842 Ga0068858_100015668 Ga0068858_1000156685 744
136 3300006237 Ga0097621_100010942 Ga0097621_1000109426 744
137 3300006358 Ga0068871_100003330 Ga0068871_1000033306 744
138 3300025942 Ga0207689_10005273 Ga0207689_100052731 744
139 3300038741 Ga0400488_63615 Ga0400488_63615_3719_6016 744
140 3300039110 Ga0400487_27950 Ga0400487_27950_44826_47129 744
141 3300033528 Ga0316588_1001395 Ga0316588_10013953 745
142 3300036647 Ga0316582_0000981 Ga0316582_0000981_2430_4823 745
143 3300039062 Ga0400483_040007 Ga0400483_040007_17518_19824 745
144 3300039062 Ga0400483_166114 Ga0400483_166114_9684_11990 745
145 3300025299 Ga0209256_1005733 Ga0209256_10057336 746
146 3300036712 Ga0316584_0049757 Ga0316584_0049757_575_2968 746
147 3300046616 Ga0495668_0002621 Ga0495668_0002621_9014_11575 756
148 3300003781 Ga0055536_1006016 Ga0055536_10060166 759
149 3300003781 Ga0055536_1008580 Ga0055536_10085803 759
150 3300025292 Ga0209676_1001358 Ga0209676_100135824 759
151 3300025292 Ga0209676_1003601 Ga0209676_10036017 761
152 iso_pu_bacteria 2894414249 2894416547 768
153 3300003794 Ga0055531_10008181 Ga0055531_100081813 771
154 3300025304 Ga0209257_1001439 Ga0209257_10014396 771
155 3300025299 Ga0209256_1006682 Ga0209256_10066824 779
156 iso_pu_bacteria 8003014200 8003017453 781
157 iso_pu_bacteria 2643221573 2643881108 786
158 iso_pu_bacteria 2643221720 2644661878 786
159 iso_pu_bacteria 2643221728 2644700019 786
160 iso_pu_bacteria 2643221559 2643816821 787
161 iso_pu_bacteria 2643221586 2643939239 787
162 iso_pu_bacteria 2643221612 2644077917 787
163 iso_pu_bacteria 2643221727 2644696218 787
164 3300025294 Ga0209025_1007858 Ga0209025_10078584 789
165 iso_pu_bacteria 2995948881 2995953324 789
166 3300003775 Ga0055524_1012540 Ga0055524_10125402 796
167 3300025292 Ga0209676_1012633 Ga0209676_10126332 796
168 3300025299 Ga0209256_1008485 Ga0209256_10084854 796
169 3300025303 Ga0209051_1007649 Ga0209051_10076495 796
170 3300025304 Ga0209257_1002612 Ga0209257_10026124 796
171 3300025304 Ga0209257_1006821 Ga0209257_10068216 796

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03091

CutA1

CutA1 divalent ion tolerance protein

6

104

0.98

PF11412

DsbD_N

Thiol:disulfide interchange protein DsbD, N-terminal

322

442

0.96

PF11412

DsbD_N

Thiol:disulfide interchange protein DsbD, N-terminal

169

290

0.94

PF13899

Thioredoxin_7

Thioredoxin-like

779

863

0.87

PF02683

DsbD

Cytochrome C biogenesis protein transmembrane region

486

694

0.84

PF13098

Thioredoxin_2

Thioredoxin-like domain

790

886

0.83

PF13386

DsbD_2

Cytochrome C biogenesis protein transmembrane region

485

691

0.77

PF00085

Thioredoxin

Thioredoxin

780

888

0.66

Feature Viewer

pLDDT pTM Quality
69.58 0.4 Low
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Predicted Structure (AlphaFold2)

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