F258659

General Info

Members Datasets Scaffolds Average Seq Length
171 117 342 279

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10390088|Ga0105245_103900882
Length 294
Sequence MLRASPVCEDRIMRYGVTLFATGKSIGIVELAKAVEERGLDSVWLPEHTHIPTSRRTPYPGALDGVLPDEYRRCLDPFVGLTAAAMAAPSIRVGTGILLVAQHDPIVTAKEAASIDFVTGGRFTMGIGFGWNEDEMNDHGTEYRTRREVGRERVLAMRELWTKEEASFDGTHVHLPPSWAWPKPVQPGGPPVLIGGAAGPKLFAHIAEYADGWIPIGGRGLTQAIPQLHAVVEEAGRDPSTLQITPFAVIPDPGKLDHYESIGVTECVFQLPSAPADVVLPLLDKQAAIVGERR

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
35 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
56 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
69 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
76 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
97 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
108 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
109 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
112 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
113 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
116 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
117 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.25
Metatranscriptomes 0.58
Isolates 1.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.34
Nodule 0
Rhizoplane 5.26
Rhizosphere 87.72
Stem 0
Stem Tuber 0
Unclassified 2.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10390088 3300009098 Bacteria 1389
2 Ga0058859_11357543 3300004798 Bacteria 1365
3 Ga0065707_10207789 3300005295 Bacteria 1280
4 Ga0070689_100315333 3300005340 Bacteria 1304
5 Ga0070668_100345237 3300005347 Bacteria 1258
6 Ga0070669_100437272 3300005353 Bacteria 1076
7 Ga0070708_100316874 3300005445 Unclassified 1469
8 Ga0070708_100635956 3300005445 Bacteria 1006
9 Ga0070706_100023681 3300005467 Bacteria 5652
10 Ga0070706_100032146 3300005467 Bacteria 4840
11 Ga0070706_100037110 3300005467 Bacteria 4502
12 Ga0070706_100077368 3300005467 Bacteria 3079
13 Ga0070706_100403391 3300005467 Bacteria 1273
14 Ga0070698_100198978 3300005471 Bacteria 1940
15 Ga0070699_100113443 3300005518 Bacteria 2381
16 Ga0070699_100169222 3300005518 Bacteria 1936
17 Ga0070665_100762992 3300005548 Bacteria 980
18 Ga0068857_100299482 3300005577 Unclassified 1482
19 Ga0068859_100061145 3300005617 Bacteria 3795
20 Ga0068864_100020115 3300005618 Bacteria 5582
21 Ga0068860_100128278 3300005843 Unclassified 2432
22 Ga0068860_100701054 3300005843 Bacteria 1022
23 Ga0068862_100072042 3300005844 Bacteria 2984
24 Ga0075430_100220653 3300006846 Bacteria 1573
25 Ga0075431_100000212 3300006847 Bacteria 42845
26 Ga0075431_100027019 3300006847 Bacteria 5887
27 Ga0075433_10002488 3300006852 Bacteria 14020
28 Ga0075433_10004241 3300006852 Bacteria 11134
29 Ga0075434_100016220 3300006871 Bacteria 7161
30 Ga0075434_100161593 3300006871 Bacteria 2260
31 Ga0075429_100029053 3300006880 Bacteria 4801
32 Ga0097620_100061144 3300006931 Bacteria 3795
33 Ga0075435_100014542 3300007076 Bacteria 5887
34 Ga0111539_10175604 3300009094 Bacteria 2503
35 Ga0111539_10623017 3300009094 Bacteria 1256
36 Ga0105245_10026285 3300009098 Bacteria 5122
37 Ga0105245_10061146 3300009098 Bacteria 3394
38 Ga0114129_10012698 3300009147 Bacteria 11991
39 Ga0114129_10250885 3300009147 Bacteria 2376
40 Ga0114129_10301277 3300009147 Bacteria 2136
41 Ga0114129_10415543 3300009147 Bacteria 1770
42 Ga0105243_10437935 3300009148 Bacteria 1223
43 Ga0105241_10063380 3300009174 Bacteria 2852
44 Ga0105242_10005931 3300009176 Bacteria 9423
45 Ga0105242_10081571 3300009176 Bacteria 2705
46 Ga0105249_10138388 3300009553 Bacteria 2332
47 Ga0105249_10228827 3300009553 Bacteria 1833
48 Ga0105239_10266155 3300010375 Bacteria 1927
49 Ga0105246_10136518 3300011119 Bacteria 1839
50 Ga0163162_10123357 3300013306 Bacteria 2696
51 Ga0163162_10353387 3300013306 Unclassified 1602
52 Ga0157375_10172301 3300013308 Bacteria 2312
53 Ga0163161_10215896 3300017792 Bacteria 1483
54 Ga0207697_10106843 3300025315 Bacteria 1196
55 Ga0207684_10104636 3300025910 Bacteria 2420
56 Ga0207646_10326246 3300025922 Bacteria 1387
57 Ga0207646_10332194 3300025922 Bacteria 1373
58 Ga0207681_10251617 3300025923 Bacteria 1380
59 Ga0207687_10034657 3300025927 Bacteria 3428
60 Ga0207700_10508647 3300025928 Bacteria 1066
61 Ga0207686_10057788 3300025934 Bacteria 2443
62 Ga0207711_10638156 3300025941 Bacteria 994
63 Ga0207661_10085026 3300025944 Bacteria 2622
64 Ga0207651_10418395 3300025960 Bacteria 1144
65 Ga0207712_10038641 3300025961 Bacteria 3265
66 Ga0207712_10244656 3300025961 Bacteria 1447
67 Ga0207668_10296856 3300025972 Bacteria 1332
68 Ga0207708_10101844 3300026075 Bacteria 2223
69 Ga0207641_10064103 3300026088 Bacteria 3140
70 Ga0207676_10369256 3300026095 Bacteria 1332
71 Ga0207675_100227575 3300026118 Bacteria 1798
72 Ga0268265_10100193 3300028380 Bacteria 2338
73 Ga0268264_10256997 3300028381 Unclassified 1625
74 Ga0268264_10636079 3300028381 Bacteria 1055
75 Ga0265330_10022371 3300031235 Bacteria 2877
76 Ga0265332_10000314 3300031238 Bacteria 37122
77 Ga0265328_10000770 3300031239 Bacteria 14779
78 Ga0265320_10048294 3300031240 Bacteria 2078
79 Ga0265331_10000064 3300031250 Bacteria 165231
80 Ga0265316_10000525 3300031344 Bacteria 43263
81 Ga0265314_10000110 3300031711 Bacteria 124924
82 Ga0265342_10004119 3300031712 Bacteria 11577
83 Ga0316574_0080908 3300035398 Bacteria 2063
84 Ga0373935_0194206 3300035692 Bacteria 1400
85 Ga0373947_0057561 3300035725 Bacteria 2353
86 Ga0400483_053269 3300039062 Bacteria 6636
87 Ga0400483_241184 3300039062 Bacteria 7737
88 Ga0400483_251205 3300039062 Bacteria 6421
89 Ga0436365_0640367 3300039437 Bacteria 12878
90 Ga0436365_1716145 3300039437 Bacteria 917
91 Ga0466963_0177598 3300044694 Bacteria 1486
92 Ga0466967_0051722 3300045976 Bacteria 3602
93 Ga0495639_0016417 3300046475 Bacteria 3215
94 Ga0495594_0056683 3300046499 Bacteria 2163
95 Ga0495618_0005425 3300046514 Bacteria 7775
96 Ga0495630_0164515 3300046517 Bacteria 1689
97 Ga0495586_0096062 3300046535 Bacteria 1641
98 Ga0495634_0050134 3300046642 Bacteria 2805
99 Ga0495635_0197500 3300046663 Bacteria 1365
100 Ga0495588_0050262 3300046674 Bacteria 2145
101 Ga0495588_0237364 3300046674 Bacteria 962
102 Ga0495647_0047785 3300046681 Bacteria 1653
103 Ga0495647_0063758 3300046681 Bacteria 1460
104 Ga0495613_0000275 3300046689 Bacteria 47915
105 Ga0495581_0044543 3300047315 Bacteria 2566
106 Ga0495604_0017209 3300047317 Bacteria 5783
107 Ga0495676_0091749 3300047321 Bacteria 2269
108 Ga0495676_0228889 3300047321 Bacteria 1278
109 Ga0495676_0283576 3300047321 Bacteria 1121
110 Ga0496105_0172955 3300048908 Bacteria 1770
111 Ga0496105_0388515 3300048908 Bacteria 1110
112 Ga0496108_0098472 3300048911 Bacteria 2492
113 Ga0496109_0007003 3300048912 Bacteria 9511
114 Ga0496109_0139145 3300048912 Bacteria 2270
115 Ga0496110_0010485 3300048913 Bacteria 7541
116 Ga0496110_0184254 3300048913 Bacteria 1896
117 Ga0496112_0005103 3300048915 Bacteria 11284
118 Ga0496113_0011352 3300048916 Bacteria 5937
119 Ga0496126_0000007 3300048929 Bacteria 787364
120 Ga0501031_0413744 3300049568 Bacteria 872
121 Ga0501034_0003687 3300049571 Bacteria 17309
122 Ga0501034_0004223 3300049571 Bacteria 16042
123 Ga0501034_0471813 3300049571 Bacteria 1171
124 Ga0501047_0199668 3300049581 Bacteria 1861
125 Ga0501068_0010998 3300049584 Bacteria 5092
126 Ga0501068_0069950 3300049584 Bacteria 2140
127 Ga0501068_0177974 3300049584 Bacteria 1344
128 Ga0501069_0004802 3300049585 Bacteria 6996
129 Ga0501070_0001337 3300049586 Bacteria 22017
130 Ga0501071_0034188 3300049587 Bacteria 3616
131 Ga0501072_0020104 3300049588 Bacteria 5170
132 Ga0501072_0176763 3300049588 Bacteria 1703
133 Ga0501072_0569534 3300049588 Bacteria 894
134 Ga0501073_0034112 3300049589 Bacteria 3623
135 Ga0501074_0000504 3300049590 Bacteria 23959
136 Ga0501076_0103416 3300049592 Bacteria 2298
137 Ga0501080_0000715 3300049742 Bacteria 26717
138 Ga0501080_0037422 3300049742 Bacteria 4532
139 Ga0501083_0009221 3300049744 Bacteria 6968
140 Ga0501083_0098008 3300049744 Bacteria 1934
141 nmdc:mga03683_77204_c1 3300050489 Bacteria 1433
142 nmdc:mga05p37_109620_c1 3300050507 Bacteria 3396
143 nmdc:mga05p37_179540_c1 3300050507 Bacteria 2576
144 nmdc:mga05p37_192331_c2 3300050507 Bacteria 1333
145 nmdc:mga05p37_203588_c1 3300050507 Bacteria 2395
146 nmdc:mga05p37_569372_c1 3300050507 Bacteria 1285
147 nmdc:mga09592_90936_c1 3300050508 Bacteria 2608
148 nmdc:mga0qj67_77198_c1 3300050509 Bacteria 2664
149 nmdc:mga06r32_124302_c1 3300050510 Bacteria 2547
150 nmdc:mga06r32_143841_c1 3300050510 Bacteria 2362
151 nmdc:mga06r32_270_c1 3300050510 Bacteria 43060
152 nmdc:mga08y16_128598_c1 3300050511 Bacteria 2635
153 nmdc:mga08y16_361523_c1 3300050511 Bacteria 1490
154 nmdc:mga0n895_166487_c1 3300050512 Bacteria 2236
155 nmdc:mga0n895_183064_c1 3300050512 Bacteria 2126
156 nmdc:mga0n895_23240_c1 3300050512 Bacteria 5824
157 nmdc:mga0n895_345361_c1 3300050512 Bacteria 1507
158 nmdc:mga0rr50_20662_c1 3300050513 Bacteria 4478
159 nmdc:mga0rr50_86835_c1 3300050513 Bacteria 2427
160 nmdc:mga08x19_148939_c1 3300050514 Bacteria 1584
161 nmdc:mga0a205_2243_c1 3300050515 Bacteria 17031
162 nmdc:mga0a205_4719_c1 3300050515 Bacteria 12234
163 Ga0500566_0187098 3300053094 Bacteria 1057
164 Ga0500616_0005523 3300053153 Bacteria 8563
165 Ga0500609_001972 3300053731 Bacteria 2962
166 Ga0501084_0000010 3300054114 Bacteria 187712
167 Ga0501084_0003007 3300054114 Bacteria 13656
168 Ga0530510_0025292 3300061734 Bacteria 4244
169 Ga0530510_0108502 3300061734 Bacteria 2032
170 2873321467 2873314349 Bacteria 8512634
171 8055072904 8055066027 Bacteria 9479577
172 Ga0105245_10390088
173 Ga0058859_11357543
174 Ga0065707_10207789
175 Ga0070689_100315333
176 Ga0070668_100345237
177 Ga0070669_100437272
178 Ga0070708_100316874
179 Ga0070708_100635956
180 Ga0070706_100023681
181 Ga0070706_100032146
182 Ga0070706_100037110
183 Ga0070706_100077368
184 Ga0070706_100403391
185 Ga0070698_100198978
186 Ga0070699_100113443
187 Ga0070699_100169222
188 Ga0070665_100762992
189 Ga0068857_100299482
190 Ga0068859_100061145
191 Ga0068864_100020115
192 Ga0068860_100128278
193 Ga0068860_100701054
194 Ga0068862_100072042
195 Ga0075430_100220653
196 Ga0075431_100000212
197 Ga0075431_100027019
198 Ga0075433_10002488
199 Ga0075433_10004241
200 Ga0075434_100016220
201 Ga0075434_100161593
202 Ga0075429_100029053
203 Ga0097620_100061144
204 Ga0075435_100014542
205 Ga0111539_10175604
206 Ga0111539_10623017
207 Ga0105245_10026285
208 Ga0105245_10061146
209 Ga0114129_10012698
210 Ga0114129_10250885
211 Ga0114129_10301277
212 Ga0114129_10415543
213 Ga0105243_10437935
214 Ga0105241_10063380
215 Ga0105242_10005931
216 Ga0105242_10081571
217 Ga0105249_10138388
218 Ga0105249_10228827
219 Ga0105239_10266155
220 Ga0105246_10136518
221 Ga0163162_10123357
222 Ga0163162_10353387
223 Ga0157375_10172301
224 Ga0163161_10215896
225 Ga0207697_10106843
226 Ga0207684_10104636
227 Ga0207646_10326246
228 Ga0207646_10332194
229 Ga0207681_10251617
230 Ga0207687_10034657
231 Ga0207700_10508647
232 Ga0207686_10057788
233 Ga0207711_10638156
234 Ga0207661_10085026
235 Ga0207651_10418395
236 Ga0207712_10038641
237 Ga0207712_10244656
238 Ga0207668_10296856
239 Ga0207708_10101844
240 Ga0207641_10064103
241 Ga0207676_10369256
242 Ga0207675_100227575
243 Ga0268265_10100193
244 Ga0268264_10256997
245 Ga0268264_10636079
246 Ga0265330_10022371
247 Ga0265332_10000314
248 Ga0265328_10000770
249 Ga0265320_10048294
250 Ga0265331_10000064
251 Ga0265316_10000525
252 Ga0265314_10000110
253 Ga0265342_10004119
254 Ga0316574_0080908
255 Ga0373935_0194206
256 Ga0373947_0057561
257 Ga0400483_053269
258 Ga0400483_241184
259 Ga0400483_251205
260 Ga0436365_0640367
261 Ga0436365_1716145
262 Ga0466963_0177598
263 Ga0466967_0051722
264 Ga0495639_0016417
265 Ga0495594_0056683
266 Ga0495618_0005425
267 Ga0495630_0164515
268 Ga0495586_0096062
269 Ga0495634_0050134
270 Ga0495635_0197500
271 Ga0495588_0050262
272 Ga0495588_0237364
273 Ga0495647_0047785
274 Ga0495647_0063758
275 Ga0495613_0000275
276 Ga0495581_0044543
277 Ga0495604_0017209
278 Ga0495676_0091749
279 Ga0495676_0228889
280 Ga0495676_0283576
281 Ga0496105_0172955
282 Ga0496105_0388515
283 Ga0496108_0098472
284 Ga0496109_0007003
285 Ga0496109_0139145
286 Ga0496110_0010485
287 Ga0496110_0184254
288 Ga0496112_0005103
289 Ga0496113_0011352
290 Ga0496126_0000007
291 Ga0501031_0413744
292 Ga0501034_0003687
293 Ga0501034_0004223
294 Ga0501034_0471813
295 Ga0501047_0199668
296 Ga0501068_0010998
297 Ga0501068_0069950
298 Ga0501068_0177974
299 Ga0501069_0004802
300 Ga0501070_0001337
301 Ga0501071_0034188
302 Ga0501072_0020104
303 Ga0501072_0176763
304 Ga0501072_0569534
305 Ga0501073_0034112
306 Ga0501074_0000504
307 Ga0501076_0103416
308 Ga0501080_0000715
309 Ga0501080_0037422
310 Ga0501083_0009221
311 Ga0501083_0098008
312 nmdc:mga03683_77204_c1
313 nmdc:mga05p37_109620_c1
314 nmdc:mga05p37_179540_c1
315 nmdc:mga05p37_192331_c2
316 nmdc:mga05p37_203588_c1
317 nmdc:mga05p37_569372_c1
318 nmdc:mga09592_90936_c1
319 nmdc:mga0qj67_77198_c1
320 nmdc:mga06r32_124302_c1
321 nmdc:mga06r32_143841_c1
322 nmdc:mga06r32_270_c1
323 nmdc:mga08y16_128598_c1
324 nmdc:mga08y16_361523_c1
325 nmdc:mga0n895_166487_c1
326 nmdc:mga0n895_183064_c1
327 nmdc:mga0n895_23240_c1
328 nmdc:mga0n895_345361_c1
329 nmdc:mga0rr50_20662_c1
330 nmdc:mga0rr50_86835_c1
331 nmdc:mga08x19_148939_c1
332 nmdc:mga0a205_2243_c1
333 nmdc:mga0a205_4719_c1
334 Ga0500566_0187098
335 Ga0500616_0005523
336 Ga0500609_001972
337 Ga0501084_0000010
338 Ga0501084_0003007
339 Ga0530510_0025292
340 Ga0530510_0108502
341 2873321467
342 8055072904

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

18

251

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1z69-assembly1.cif.gz_B crystal structure of methylenetetrahydromethanopterin reductase (mer) in complex with coenzyme f420 0.8474 1 241
1brl-assembly2.cif.gz_C three-dimensional structure of bacterial luciferase from vibrio harveyi at 2.4 angstroms resolution 0.8458 1 234
6ask-assembly1.cif.gz_A crystal structure of apo flavin monooxygenase cmoj (earlier ytnj) 0.8115 1 237
5xkd-assembly1.cif.gz_B crystal structure of dibenzothiophene sulfone monooxygenase bdsa in complex with fmn at 2.4 angstrom 0.8066 1 235
3fgc-assembly2.cif.gz_C crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication 0.8052 1 248
ID Description Score Start End Superfamily
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9586 17 276 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9505 1 275 3.20.20.30
af_P9WKN5_1_280_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9503 1 277 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9478 17 276 3.20.20.30
af_P9WKN5_1_280_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9437 1 277 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A2V6RVL8-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9906 1 142 GO:0016705
AF-A0A356IFJ5-F1-model_v4 LLM class F420-dependent oxidoreductase 0.986 1 244 GO:0008726
GO:0046306
AF-A0A2V6RVL8-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9837 1 142 GO:0016705
AF-A0A6L7UYM8-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9807 1 278 GO:0016705
AF-A0A2D9JS61-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9786 1 275 GO:0008726
GO:0046306

Map