F257207

General Info

Members Datasets Scaffolds Average Seq Length
170 134 340 273

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0112960|Ga0395901_0112960_841_1770
Length 309
Sequence LAEEPSEPLGLAGQAARPPREEVATINATVGAPPEPATEAVAVTETAVLASYRRADRKRRWLQWSLGIFSVVAVXXXYWVLTRTSNTPALLPPPSAIVRDFIDGVKSHSLIDATLASLKRVAIGYGIGCSIAVIIGSLRGWYRILGYLLDPIVDALRPVPALAYIPLVILWFGIGESSRVLVIGVASFLSCIVSVTAGMRRVPPVYVDAARTLGASNRRVFVSVALPAAVPYIFAGLRVALGAAWGTLVAAELIAAQTGLGFLLETGQEFLHTATVIVALLVIGIVGFLMDVLLKIVESRLLAWAPRRG

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
10 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
11 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
14 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
15 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
16 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
25 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
26 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
27 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
28 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
29 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
30 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
31 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
32 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
33 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
34 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
35 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
36 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
37 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
38 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
39 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
40 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
41 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
42 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
43 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
44 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
47 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
48 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
49 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
50 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
51 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
52 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
53 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
54 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
55 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
56 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
57 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
58 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
59 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
60 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
61 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
62 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
63 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
75 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
76 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
77 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
78 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
81 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
84 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
85 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
86 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
87 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
88 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
89 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
90 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
91 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
92 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
93 2643221549 Agromyces sp. Root1464 Isolate Unclassified
94 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
95 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
96 2643221649 Leifsonia sp. Root4 Isolate Unclassified
97 2643221698 Ensifer sp. Root142 Isolate Unclassified
98 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
99 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
100 2738541293 Rhizobium sp. GV031 Isolate Unclassified
101 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
102 2738543013 Variovorax sp. BT01 Isolate Unclassified
103 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
104 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
105 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
106 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
107 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
108 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
109 2808606394 Promicromonospora sp. C35 Isolate Unclassified
110 2808606448 Streptomyces sp. 193411 Isolate Unclassified
111 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
112 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
113 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
114 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
115 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
116 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
117 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
118 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
119 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
120 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
121 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
122 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
123 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
124 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
125 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
126 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
127 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
128 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
129 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
130 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
131 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
132 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
133 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
134 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 69.41
Metatranscriptomes 0
Isolates 30.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.12
Nodule 3.53
Rhizoplane 1.18
Rhizosphere 62.94
Stem 0
Stem Tuber 0.59
Unclassified 0.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0112960 3300038443 Bacteria 2853
2 rootH1_10074928 3300003323 Bacteria 1873
3 Ga0055531_10000714 3300003794 Bacteria 28350
4 Ga0070658_10030404 3300005327 Bacteria 4338
5 Ga0070679_100064548 3300005530 Bacteria 3649
6 Ga0068855_100022084 3300005563 Bacteria 7628
7 Ga0081455_10141098 3300005937 Bacteria 1871
8 Ga0081539_10000198 3300005985 Bacteria 140511
9 Ga0075434_100379543 3300006871 Bacteria 1434
10 Ga0105240_10005831 3300009093 Bacteria 18268
11 Ga0157370_10001607 3300013104 Bacteria 27932
12 Ga0157369_10001833 3300013105 Bacteria 25683
13 Ga0157372_10229685 3300013307 Bacteria 2151
14 Ga0209676_1007980 3300025292 Bacteria 4832
15 Ga0209758_1000684 3300025297 Bacteria 50528
16 Ga0209050_1021708 3300025298 Bacteria 2330
17 Ga0209051_1003945 3300025303 Bacteria 9451
18 Ga0209257_1001171 3300025304 Bacteria 33161
19 Ga0207705_10026181 3300025909 Bacteria 4161
20 Ga0207705_10074451 3300025909 Bacteria 2465
21 Ga0207695_10013312 3300025913 Bacteria 9815
22 Ga0207667_10014313 3300025949 Bacteria 9047
23 Ga0307515_10000030 3300028794 Bacteria 364482
24 Ga0307515_10000893 3300028794 Bacteria 68669
25 Ga0307515_10135419 3300028794 Bacteria 2682
26 Ga0307512_10044559 3300030522 Bacteria 3646
27 Ga0316181_1134995 3300030744 Bacteria 1286
28 Ga0265327_10000236 3300031251 Bacteria 110434
29 Ga0307513_10122548 3300031456 Bacteria 2563
30 Ga0307408_100140531 3300031548 Bacteria 1895
31 Ga0307514_10004843 3300031649 Bacteria 12245
32 Ga0307516_10005528 3300031730 Bacteria 15072
33 Ga0307412_10526221 3300031911 Bacteria 989
34 Ga0307416_100544632 3300032002 Bacteria 1233
35 Ga0307414_10279560 3300032004 Bacteria 1402
36 Ga0307510_10025549 3300033180 Bacteria 6808
37 Ga0395899_0102049 3300037312 Bacteria 2070
38 Ga0395899_0109097 3300037312 Bacteria 1992
39 Ga0395900_0019014 3300037418 Bacteria 7006
40 Ga0395898_0005172 3300037466 Bacteria 14114
41 Ga0395898_0192762 3300037466 Bacteria 1947
42 Ga0395901_0006755 3300038443 Bacteria 11586
43 Ga0451835_0934032 3300041492 Bacteria 7221
44 Ga0451839_0173946 3300041496 Bacteria 17987
45 Ga0451841_1118014 3300041498 Bacteria 5142
46 Ga0451845_0754574 3300041501 Bacteria 3993
47 Ga0451849_1346844 3300041505 Bacteria 2479
48 Ga0451851_0351364 3300041507 Bacteria 14133
49 Ga0451843_0534795 3300041509 Bacteria 9753
50 Ga0451853_0880138 3300041512 Bacteria 18525
51 Ga0439449_0001877 3300042007 Bacteria 8274
52 Ga0439462_0019857 3300042015 Bacteria 1751
53 Ga0439446_0072626 3300042156 Unclassified 1055
54 Ga0466968_0097336 3300044735 Bacteria 1310
55 Ga0495603_0004311 3300046455 Bacteria 8479
56 Ga0495603_0008018 3300046455 Bacteria 6377
57 Ga0495629_0002884 3300046459 Bacteria 13141
58 Ga0495638_0190016 3300046460 Bacteria 1166
59 Ga0495654_0000184 3300046530 Bacteria 61015
60 Ga0495625_0034109 3300046660 Bacteria 3758
61 Ga0495588_0103233 3300046674 Bacteria 1499
62 Ga0495613_0001760 3300046689 Bacteria 16477
63 Ga0495589_0009070 3300046794 Bacteria 5171
64 Ga0495581_0102401 3300047315 Bacteria 1664
65 Ga0495676_0001161 3300047321 Bacteria 22419
66 Ga0495676_0102274 3300047321 Bacteria 2117
67 Ga0495683_0190765 3300047323 Bacteria 930
68 Ga0495685_001009 3300047447 Bacteria 8567
69 Ga0495686_0005193 3300047472 Bacteria 10369
70 Ga0495614_0005913 3300048089 Bacteria 5512
71 Ga0496121_0030434 3300048924 Bacteria 4957
72 Ga0496121_0225938 3300048924 Bacteria 1314
73 Ga0501031_0079146 3300049568 Bacteria 2142
74 Ga0501031_0173438 3300049568 Bacteria 1409
75 Ga0501032_0023738 3300049569 Bacteria 4233
76 Ga0501032_0154653 3300049569 Bacteria 1507
77 Ga0501033_0019568 3300049570 Bacteria 5118
78 Ga0501034_0026297 3300049571 Bacteria 5927
79 Ga0501034_0161127 3300049571 Bacteria 2214
80 Ga0501034_0171983 3300049571 Bacteria 2133
81 Ga0501034_0222739 3300049571 Bacteria 1838
82 Ga0501036_0016805 3300049572 Bacteria 6112
83 Ga0501036_0116996 3300049572 Bacteria 2251
84 Ga0501037_0003969 3300049573 Bacteria 10734
85 Ga0501037_0028530 3300049573 Bacteria 4123
86 Ga0501037_0216444 3300049573 Bacteria 1349
87 Ga0501038_0000973 3300049574 Bacteria 25695
88 Ga0501038_0013514 3300049574 Bacteria 7440
89 Ga0501038_0126148 3300049574 Bacteria 2106
90 Ga0501038_0342637 3300049574 Bacteria 1165
91 Ga0501042_0112757 3300049578 Bacteria 1958
92 Ga0501043_0007453 3300049579 Bacteria 8690
93 Ga0501043_0029687 3300049579 Bacteria 4296
94 Ga0501043_0076265 3300049579 Bacteria 2634
95 Ga0501047_0000092 3300049581 Bacteria 111389
96 Ga0501067_0074146 3300049583 Bacteria 1886
97 Ga0501068_0011018 3300049584 Bacteria 5089
98 Ga0501069_0133884 3300049585 Bacteria 1420
99 Ga0501070_0037901 3300049586 Bacteria 4023
100 Ga0501070_0039122 3300049586 Bacteria 3956
101 Ga0501074_0124264 3300049590 Bacteria 1845
102 Ga0501080_0056382 3300049742 Bacteria 3659
103 Ga0501080_0223245 3300049742 Bacteria 1723
104 Ga0501083_0000055 3300049744 Bacteria 82183
105 Ga0501035_0018585 3300049822 Bacteria 6402
106 Ga0501035_0019094 3300049822 Bacteria 6309
107 Ga0501035_0052929 3300049822 Bacteria 3632
108 Ga0501035_0167486 3300049822 Bacteria 1899
109 Ga0501035_0273019 3300049822 Bacteria 1430
110 Ga0501044_0007027 3300049823 Bacteria 12391
111 Ga0501044_0032144 3300049823 Bacteria 5516
112 Ga0501044_0036980 3300049823 Bacteria 5104
113 Ga0501044_0039107 3300049823 Bacteria 4950
114 Ga0501044_0061088 3300049823 Bacteria 3856
115 Ga0501044_0176089 3300049823 Bacteria 2108
116 Ga0501044_0270094 3300049823 Bacteria 1636
117 nmdc:mga0k408_304_c1 3300050493 Bacteria 26596
118 Ga0495655_0013598 3300053083 Bacteria 1687
119 2513639876 2513237094 Bacteria 8789602
120 2515660045 2515154116 Bacteria 7552979
121 2585167149 2582581283 Bacteria 6030556
122 2585301318 2582581312 Bacteria 7308206
123 2585993334 2585427633 Bacteria 6413184
124 2586003983 2585427634 Bacteria 6455027
125 2600377592 2600254933 Bacteria 4750527
126 2616555948 2615840698 Bacteria 7319877
127 2643766420 2643221549 Bacteria 4042819
128 2644194918 2643221634 Bacteria 6705461
129 2644195064 2643221634 Bacteria 6705461
130 2644198044 2643221635 Bacteria 2632343
131 2644278455 2643221649 Bacteria 3867359
132 2644542232 2643221698 Bacteria 7756764
133 2671694026 2671180139 Bacteria 4196045
134 2676488441 2675903060 Bacteria 10051191
135 2676491511 2675903060 Bacteria 10051191
136 2738804334 2738541293 Bacteria 7065685
137 2738948425 2738541317 Bacteria 5340176
138 2739251022 2738543013 Bacteria 5618633
139 2739606568 2739367654 Bacteria 6049412
140 2757571856 2757320392 Bacteria 3737298
141 2760306638 2758568522 Bacteria 5953541
142 2776375366 2775506925 Bacteria 7237746
143 2784585740 2784132148 Bacteria 8627943
144 2793975861 2791355406 Bacteria 11364898
145 2809029790 2808606394 Bacteria 6248540
146 2809229238 2808606448 Bacteria 8656184
147 2812476944 2811994917 Bacteria 7761064
148 2819688500 2818991461 Bacteria 7026071
149 2858901964 2858895516 Bacteria 7378898
150 2862706830 2862705112 Bacteria 6563286
151 2863075652 2863067949 Bacteria 8541735
152 2873316063 2873314349 Bacteria 8512634
153 2884763832 2884763398 Bacteria 4091164
154 2891404284 2891395885 Bacteria 9251614
155 2891559036 2891554331 Bacteria 8812224
156 2895427964 2895427314 Bacteria 13147766
157 2913313214 2913308742 Bacteria 5350706
158 3005422458 3005416602 Bacteria 7064308
159 3006500575 3006493962 Bacteria 8825450
160 8001787031 8001781756 Bacteria 9586736
161 8005320213 8005314921 Bacteria 7072929
162 8005685673 8005682033 Bacteria 6726518
163 8008491665 8008485437 Bacteria 7198341
164 8025524721 8025524527 Bacteria 7197316
165 8033687947 8033684223 Bacteria 6906479
166 8047901582 8047893842 Bacteria 11723082
167 8048357311 8048356638 Bacteria 11044339
168 8048378520 8048369669 Bacteria 11666822
169 8048387621 8048379754 Bacteria 11877923
170 8055175642 8055172936 Bacteria 9305943
171 Ga0395901_0112960
172 rootH1_10074928
173 Ga0055531_10000714
174 Ga0070658_10030404
175 Ga0070679_100064548
176 Ga0068855_100022084
177 Ga0081455_10141098
178 Ga0081539_10000198
179 Ga0075434_100379543
180 Ga0105240_10005831
181 Ga0157370_10001607
182 Ga0157369_10001833
183 Ga0157372_10229685
184 Ga0209676_1007980
185 Ga0209758_1000684
186 Ga0209050_1021708
187 Ga0209051_1003945
188 Ga0209257_1001171
189 Ga0207705_10026181
190 Ga0207705_10074451
191 Ga0207695_10013312
192 Ga0207667_10014313
193 Ga0307515_10000030
194 Ga0307515_10000893
195 Ga0307515_10135419
196 Ga0307512_10044559
197 Ga0316181_1134995
198 Ga0265327_10000236
199 Ga0307513_10122548
200 Ga0307408_100140531
201 Ga0307514_10004843
202 Ga0307516_10005528
203 Ga0307412_10526221
204 Ga0307416_100544632
205 Ga0307414_10279560
206 Ga0307510_10025549
207 Ga0395899_0102049
208 Ga0395899_0109097
209 Ga0395900_0019014
210 Ga0395898_0005172
211 Ga0395898_0192762
212 Ga0395901_0006755
213 Ga0451835_0934032
214 Ga0451839_0173946
215 Ga0451841_1118014
216 Ga0451845_0754574
217 Ga0451849_1346844
218 Ga0451851_0351364
219 Ga0451843_0534795
220 Ga0451853_0880138
221 Ga0439449_0001877
222 Ga0439462_0019857
223 Ga0439446_0072626
224 Ga0466968_0097336
225 Ga0495603_0004311
226 Ga0495603_0008018
227 Ga0495629_0002884
228 Ga0495638_0190016
229 Ga0495654_0000184
230 Ga0495625_0034109
231 Ga0495588_0103233
232 Ga0495613_0001760
233 Ga0495589_0009070
234 Ga0495581_0102401
235 Ga0495676_0001161
236 Ga0495676_0102274
237 Ga0495683_0190765
238 Ga0495685_001009
239 Ga0495686_0005193
240 Ga0495614_0005913
241 Ga0496121_0030434
242 Ga0496121_0225938
243 Ga0501031_0079146
244 Ga0501031_0173438
245 Ga0501032_0023738
246 Ga0501032_0154653
247 Ga0501033_0019568
248 Ga0501034_0026297
249 Ga0501034_0161127
250 Ga0501034_0171983
251 Ga0501034_0222739
252 Ga0501036_0016805
253 Ga0501036_0116996
254 Ga0501037_0003969
255 Ga0501037_0028530
256 Ga0501037_0216444
257 Ga0501038_0000973
258 Ga0501038_0013514
259 Ga0501038_0126148
260 Ga0501038_0342637
261 Ga0501042_0112757
262 Ga0501043_0007453
263 Ga0501043_0029687
264 Ga0501043_0076265
265 Ga0501047_0000092
266 Ga0501067_0074146
267 Ga0501068_0011018
268 Ga0501069_0133884
269 Ga0501070_0037901
270 Ga0501070_0039122
271 Ga0501074_0124264
272 Ga0501080_0056382
273 Ga0501080_0223245
274 Ga0501083_0000055
275 Ga0501035_0018585
276 Ga0501035_0019094
277 Ga0501035_0052929
278 Ga0501035_0167486
279 Ga0501035_0273019
280 Ga0501044_0007027
281 Ga0501044_0032144
282 Ga0501044_0036980
283 Ga0501044_0039107
284 Ga0501044_0061088
285 Ga0501044_0176089
286 Ga0501044_0270094
287 nmdc:mga0k408_304_c1
288 Ga0495655_0013598
289 2513639876
290 2515660045
291 2585167149
292 2585301318
293 2585993334
294 2586003983
295 2600377592
296 2616555948
297 2643766420
298 2644194918
299 2644195064
300 2644198044
301 2644278455
302 2644542232
303 2671694026
304 2676488441
305 2676491511
306 2738804334
307 2738948425
308 2739251022
309 2739606568
310 2757571856
311 2760306638
312 2776375366
313 2784585740
314 2793975861
315 2809029790
316 2809229238
317 2812476944
318 2819688500
319 2858901964
320 2862706830
321 2863075652
322 2873316063
323 2884763832
324 2891404284
325 2891559036
326 2895427964
327 2913313214
328 3005422458
329 3006500575
330 8001787031
331 8005320213
332 8005685673
333 8008491665
334 8025524721
335 8033687947
336 8047901582
337 8048357311
338 8048378520
339 8048387621
340 8055175642

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

124

303

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ahd-assembly1.cif.gz_B opua (e190q) occluded 0.8698 64 253
7ahd-assembly1.cif.gz_A opua (e190q) occluded 0.8614 64 253
7mc0-assembly1.cif.gz_B inward facing conformation of the metni methionine abc transporter 0.7973 61 260
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7919 71 265
3dhw-assembly2.cif.gz_E crystal structure of methionine importer metni 0.7815 71 253
ID Description Score Start End Superfamily
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9665 68 257 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9659 75 257 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9625 73 261 1.10.3720.10
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9377 68 257 1.10.3720.10
af_Q2G1I4_54_251_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9368 71 262 1.10.3720.10
ID Description Score Start End GO Terms
AF-B5GLL4-F1-model_v4 deleted 0.9855 51 266
AF-C0G8V4-F1-model_v4 ABC transporter related protein 0.9843 25 266 GO:0005524
GO:0005886
GO:0016887
GO:0055085
AF-A0A3C1ZKI7-F1-model_v4 deleted 0.983 32 264
AF-A0A1Q7FWV0-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9823 77 265 GO:0005886
GO:0055085
AF-W8INP5-F1-model_v4 deleted 0.9811 53 267

Map