F256661

General Info

Members Datasets Scaffolds Average Seq Length
170 131 340 308

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10341052|Ga0105245_103410521
Length 348
Sequence MAAAENTEFAQLARAVNNWGRWGPDDERGTLNLITAAHVAAAAGLVRDGKRFSLAIPLSSDGPQLGFVAGRTNPTRTMVAVHEPLGGDDDGVRFNDDAVQMGLQAATHWDALAHVSYRGRMYNGCSPSVVTEAGATRLGAERIDAVVGRGVLLDVARAAGVPRLDGGVALTAADLSRAEELGQVTVGEGDIVLLRTGQMQLLHAGDKMAYAISTAGPSMQTVRWFHERGVAAVATDNLSFEVFPCEDGAPLLPVHMLHIVEMGLLQGQNFDLEALAADCADDGRYAFLLSATPEPKHVDTAPPQLLASEASPHDHRAQSAPAPTRDSLSLCSYERTTGQAARPPPFQA

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
27 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
39 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
40 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
41 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
49 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
50 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
51 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
54 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
55 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
56 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
57 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
58 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
59 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
60 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
61 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
69 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
77 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
105 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
106 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
110 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
111 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
122 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
123 2671180195 Frankia sp. CcI49 Isolate Nodule
124 2773857922 Frankia sp. CcI49 Isolate Nodule
125 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
126 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
127 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
128 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
129 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
130 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
131 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.12
Metatranscriptomes 0
Isolates 5.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.76
Rhizoplane 0
Rhizosphere 91.18
Stem 0
Stem Tuber 0
Unclassified 2.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10341052 3300009098 Bacteria 1482
2 JGI25407J50210_10000680 3300003373 Bacteria 7039
3 JGI25405J52794_10035324 3300003911 Bacteria 1047
4 Ga0070658_10026104 3300005327 Bacteria 4686
5 Ga0070660_100241897 3300005339 Unclassified 1470
6 Ga0070708_100002172 3300005445 Bacteria 15153
7 Ga0070708_100228929 3300005445 Bacteria 1744
8 Ga0070681_10070074 3300005458 Bacteria 3472
9 Ga0070706_100006320 3300005467 Bacteria 11194
10 Ga0070707_100252474 3300005468 Bacteria 1716
11 Ga0070679_100027536 3300005530 Bacteria 5596
12 Ga0070679_100102978 3300005530 Bacteria 2841
13 Ga0070684_100072876 3300005535 Bacteria 3025
14 Ga0068853_100073835 3300005539 Bacteria 2975
15 Ga0070672_100010273 3300005543 Bacteria 6489
16 Ga0081455_10000024 3300005937 Bacteria 157764
17 Ga0081455_10000732 3300005937 Bacteria 42630
18 Ga0081455_10012371 3300005937 Bacteria 8516
19 Ga0081538_10003886 3300005981 Bacteria 13950
20 Ga0081538_10028725 3300005981 Bacteria 3817
21 Ga0075428_100000246 3300006844 Bacteria 53194
22 Ga0075428_100003333 3300006844 Bacteria 17573
23 Ga0075428_100114107 3300006844 Bacteria 2943
24 Ga0075430_100005823 3300006846 Bacteria 10399
25 Ga0075430_100005896 3300006846 Bacteria 10345
26 Ga0075431_100000206 3300006847 Bacteria 43562
27 Ga0075431_100000341 3300006847 Bacteria 36704
28 Ga0075431_100010624 3300006847 Bacteria 9257
29 Ga0075429_100002179 3300006880 Bacteria 16366
30 Ga0075429_100021145 3300006880 Bacteria 5641
31 Ga0075429_100055004 3300006880 Bacteria 3463
32 Ga0111539_10198146 3300009094 Bacteria 2342
33 Ga0105245_10552794 3300009098 Bacteria 1173
34 Ga0114129_10001339 3300009147 Bacteria 33042
35 Ga0114129_10304048 3300009147 Bacteria 2125
36 Ga0105241_10120390 3300009174 Bacteria 2113
37 Ga0105238_10342575 3300009551 Bacteria 1483
38 Ga0105239_10410355 3300010375 Bacteria 1533
39 Ga0182008_10020061 3300014497 Bacteria 3445
40 Ga0213873_10002180 3300021358 Bacteria 3361
41 Ga0213874_10021448 3300021377 Unclassified 1782
42 Ga0213876_10001756 3300021384 Bacteria 13138
43 Ga0207705_10016633 3300025909 Bacteria 5268
44 Ga0207684_10002595 3300025910 Bacteria 18094
45 Ga0207707_10121272 3300025912 Bacteria 2286
46 Ga0207707_10340323 3300025912 Unclassified 1293
47 Ga0207657_10083752 3300025919 Bacteria 2675
48 Ga0207652_10042518 3300025921 Bacteria 3868
49 Ga0207652_10188520 3300025921 Unclassified 1855
50 Ga0207646_10309516 3300025922 Bacteria 1427
51 Ga0207687_10100495 3300025927 Bacteria 2128
52 Ga0207667_10303587 3300025949 Bacteria 1631
53 Ga0265338_10002151 3300028800 Bacteria 30267
54 Ga0265338_10004552 3300028800 Bacteria 18666
55 Ga0307511_10001111 3300030521 Bacteria 28701
56 Ga0265320_10021342 3300031240 Bacteria 3487
57 Ga0265325_10012756 3300031241 Bacteria 4795
58 Ga0265339_10007891 3300031249 Bacteria 6830
59 Ga0265342_10010303 3300031712 Bacteria 6502
60 Ga0307518_10218554 3300031838 Bacteria 1246
61 Ga0307416_100507315 3300032002 Bacteria 1272
62 Ga0395900_0187249 3300037418 Bacteria 2101
63 Ga0395900_0263643 3300037418 Bacteria 1720
64 Ga0395901_0069135 3300038443 Bacteria 3678
65 Ga0436365_1010278 3300039437 Bacteria 31356
66 Ga0436365_1653450 3300039437 Bacteria 2081
67 Ga0436360_1138713 3300039438 Bacteria 1685
68 Ga0436361_0760097 3300039447 Bacteria 4903
69 Ga0436363_0642896 3300039450 Bacteria 1972
70 Ga0436362_0120495 3300039453 Bacteria 3939
71 Ga0451853_0661380 3300041512 Bacteria 1630
72 Ga0439443_016840 3300042003 Bacteria 1120
73 Ga0439450_000282 3300042008 Bacteria 6250
74 Ga0439463_013850 3300042016 Bacteria 1986
75 Ga0450894_000267 3300042131 Bacteria 9384
76 Ga0450898_000864 3300042134 Bacteria 3782
77 Ga0450899_003076 3300042135 Bacteria 1797
78 Ga0450900_002081 3300042136 Bacteria 2075
79 Ga0450906_000878 3300042145 Bacteria 6599
80 Ga0439460_0047275 3300042461 Bacteria 1280
81 Ga0466963_0008924 3300044694 Bacteria 6018
82 Ga0466957_0000291 3300044842 Bacteria 24572
83 Ga0466958_0000898 3300045836 Bacteria 13352
84 Ga0466967_0086701 3300045976 Bacteria 2837
85 Ga0466967_0157844 3300045976 Bacteria 2127
86 Ga0466967_0414025 3300045976 Bacteria 1313
87 Ga0495603_0000859 3300046455 Bacteria 17392
88 Ga0495603_0003363 3300046455 Bacteria 9517
89 Ga0495629_0011380 3300046459 Bacteria 6461
90 Ga0495629_0016817 3300046459 Bacteria 5249
91 Ga0495629_0139146 3300046459 Bacteria 1689
92 Ga0495605_0016226 3300046474 Bacteria 4034
93 Ga0495594_0000134 3300046499 Bacteria 34789
94 Ga0495608_0025077 3300046511 Bacteria 4072
95 Ga0495618_0063391 3300046514 Bacteria 2347
96 Ga0495630_0145086 3300046517 Bacteria 1805
97 Ga0495640_0012744 3300046533 Bacteria 6419
98 Ga0495586_0004665 3300046535 Bacteria 7329
99 Ga0495645_0029784 3300046543 Bacteria 3973
100 Ga0495622_0024027 3300046557 Bacteria 2844
101 Ga0495633_0112944 3300046558 Bacteria 1260
102 Ga0495667_0058336 3300046559 Bacteria 2536
103 Ga0495634_0002183 3300046642 Bacteria 16442
104 Ga0495588_0003689 3300046674 Bacteria 6706
105 Ga0495657_0177751 3300046675 Bacteria 1308
106 Ga0495658_0172631 3300046683 Bacteria 1339
107 Ga0495613_0000433 3300046689 Bacteria 35770
108 Ga0495613_0002605 3300046689 Bacteria 13557
109 Ga0495670_0025147 3300046691 Bacteria 2945
110 Ga0495676_0000874 3300047321 Bacteria 25160
111 Ga0495676_0002689 3300047321 Bacteria 15928
112 Ga0495593_0096604 3300047673 Bacteria 1518
113 Ga0495614_0013846 3300048089 Bacteria 3537
114 Ga0496124_0019484 3300048927 Bacteria 6312
115 Ga0501033_0009430 3300049570 Bacteria 7515
116 Ga0501034_0007547 3300049571 Bacteria 11568
117 Ga0501036_0016576 3300049572 Bacteria 6154
118 Ga0501037_0061565 3300049573 Bacteria 2737
119 Ga0501037_0074733 3300049573 Bacteria 2462
120 Ga0501042_0034976 3300049578 Bacteria 3564
121 Ga0501043_0141764 3300049579 Bacteria 1882
122 Ga0501043_0148937 3300049579 Bacteria 1832
123 Ga0501046_0081794 3300049580 Bacteria 2494
124 Ga0501048_0082097 3300049582 Bacteria 2273
125 Ga0501067_0011909 3300049583 Bacteria 4819
126 Ga0501068_0140538 3300049584 Bacteria 1514
127 Ga0501068_0185546 3300049584 Bacteria 1316
128 Ga0501070_0405528 3300049586 Bacteria 1102
129 Ga0501071_0007939 3300049587 Bacteria 7001
130 Ga0501071_0168142 3300049587 Bacteria 1641
131 Ga0501072_0004813 3300049588 Bacteria 10278
132 Ga0501072_0027544 3300049588 Bacteria 4433
133 Ga0501073_0000453 3300049589 Bacteria 28364
134 Ga0501073_0095999 3300049589 Bacteria 2059
135 Ga0501074_0016594 3300049590 Bacteria 5345
136 Ga0501075_0000899 3300049591 Bacteria 18795
137 Ga0501076_0009921 3300049592 Bacteria 7040
138 Ga0501077_0003512 3300049593 Bacteria 9409
139 Ga0501079_0011863 3300049741 Bacteria 6649
140 Ga0501080_0002684 3300049742 Bacteria 15584
141 Ga0501081_0015250 3300049743 Bacteria 5068
142 Ga0501083_0007294 3300049744 Bacteria 7839
143 Ga0501083_0010113 3300049744 Bacteria 6647
144 Ga0501083_0179681 3300049744 Bacteria 1382
145 nmdc:mga05p37_343_c1 3300050507 Bacteria 49990
146 nmdc:mga09592_15320_c1 3300050508 Bacteria 6261
147 nmdc:mga09592_353_c1 3300050508 Bacteria 33696
148 nmdc:mga09592_8231_c1 3300050508 Bacteria 8479
149 nmdc:mga0qj67_162787_c1 3300050509 Bacteria 1811
150 nmdc:mga0qj67_21029_c1 3300050509 Bacteria 5003
151 nmdc:mga0qj67_541_c1 3300050509 Bacteria 25740
152 nmdc:mga06r32_106736_c1 3300050510 Bacteria 2752
153 nmdc:mga06r32_1086_c1 3300050510 Bacteria 24401
154 nmdc:mga08y16_8430_c1 3300050511 Bacteria 10791
155 nmdc:mga0rr50_90813_c1 3300050513 Bacteria 2377
156 Ga0495619_0027156 3300053085 Bacteria 3688
157 Ga0501084_0045994 3300054114 Bacteria 3654
158 Ga0501082_0021728 3300060353 Bacteria 5532
159 Ga0466962_0001859 3300061719 Bacteria 9927
160 Ga0530510_0034545 3300061734 Bacteria 3643
161 2616902117 2616644941 Bacteria 8510691
162 2671832598 2671180195 Bacteria 9757215
163 2774850754 2773857922 Bacteria 9757215
164 2811849006 2808606982 Bacteria 7791042
165 2852636702 2852635781 Bacteria 8251373
166 2863404639 2863404153 Bacteria 9672205
167 2873155754 2873151551 Bacteria 8625867
168 2875395844 2875391855 Bacteria 7600475
169 2990066453 2990059506 Bacteria 9321252
170 8008567331 8008558824 Bacteria 10610750
171 Ga0105245_10341052
172 JGI25407J50210_10000680
173 JGI25405J52794_10035324
174 Ga0070658_10026104
175 Ga0070660_100241897
176 Ga0070708_100002172
177 Ga0070708_100228929
178 Ga0070681_10070074
179 Ga0070706_100006320
180 Ga0070707_100252474
181 Ga0070679_100027536
182 Ga0070679_100102978
183 Ga0070684_100072876
184 Ga0068853_100073835
185 Ga0070672_100010273
186 Ga0081455_10000024
187 Ga0081455_10000732
188 Ga0081455_10012371
189 Ga0081538_10003886
190 Ga0081538_10028725
191 Ga0075428_100000246
192 Ga0075428_100003333
193 Ga0075428_100114107
194 Ga0075430_100005823
195 Ga0075430_100005896
196 Ga0075431_100000206
197 Ga0075431_100000341
198 Ga0075431_100010624
199 Ga0075429_100002179
200 Ga0075429_100021145
201 Ga0075429_100055004
202 Ga0111539_10198146
203 Ga0105245_10552794
204 Ga0114129_10001339
205 Ga0114129_10304048
206 Ga0105241_10120390
207 Ga0105238_10342575
208 Ga0105239_10410355
209 Ga0182008_10020061
210 Ga0213873_10002180
211 Ga0213874_10021448
212 Ga0213876_10001756
213 Ga0207705_10016633
214 Ga0207684_10002595
215 Ga0207707_10121272
216 Ga0207707_10340323
217 Ga0207657_10083752
218 Ga0207652_10042518
219 Ga0207652_10188520
220 Ga0207646_10309516
221 Ga0207687_10100495
222 Ga0207667_10303587
223 Ga0265338_10002151
224 Ga0265338_10004552
225 Ga0307511_10001111
226 Ga0265320_10021342
227 Ga0265325_10012756
228 Ga0265339_10007891
229 Ga0265342_10010303
230 Ga0307518_10218554
231 Ga0307416_100507315
232 Ga0395900_0187249
233 Ga0395900_0263643
234 Ga0395901_0069135
235 Ga0436365_1010278
236 Ga0436365_1653450
237 Ga0436360_1138713
238 Ga0436361_0760097
239 Ga0436363_0642896
240 Ga0436362_0120495
241 Ga0451853_0661380
242 Ga0439443_016840
243 Ga0439450_000282
244 Ga0439463_013850
245 Ga0450894_000267
246 Ga0450898_000864
247 Ga0450899_003076
248 Ga0450900_002081
249 Ga0450906_000878
250 Ga0439460_0047275
251 Ga0466963_0008924
252 Ga0466957_0000291
253 Ga0466958_0000898
254 Ga0466967_0086701
255 Ga0466967_0157844
256 Ga0466967_0414025
257 Ga0495603_0000859
258 Ga0495603_0003363
259 Ga0495629_0011380
260 Ga0495629_0016817
261 Ga0495629_0139146
262 Ga0495605_0016226
263 Ga0495594_0000134
264 Ga0495608_0025077
265 Ga0495618_0063391
266 Ga0495630_0145086
267 Ga0495640_0012744
268 Ga0495586_0004665
269 Ga0495645_0029784
270 Ga0495622_0024027
271 Ga0495633_0112944
272 Ga0495667_0058336
273 Ga0495634_0002183
274 Ga0495588_0003689
275 Ga0495657_0177751
276 Ga0495658_0172631
277 Ga0495613_0000433
278 Ga0495613_0002605
279 Ga0495670_0025147
280 Ga0495676_0000874
281 Ga0495676_0002689
282 Ga0495593_0096604
283 Ga0495614_0013846
284 Ga0496124_0019484
285 Ga0501033_0009430
286 Ga0501034_0007547
287 Ga0501036_0016576
288 Ga0501037_0061565
289 Ga0501037_0074733
290 Ga0501042_0034976
291 Ga0501043_0141764
292 Ga0501043_0148937
293 Ga0501046_0081794
294 Ga0501048_0082097
295 Ga0501067_0011909
296 Ga0501068_0140538
297 Ga0501068_0185546
298 Ga0501070_0405528
299 Ga0501071_0007939
300 Ga0501071_0168142
301 Ga0501072_0004813
302 Ga0501072_0027544
303 Ga0501073_0000453
304 Ga0501073_0095999
305 Ga0501074_0016594
306 Ga0501075_0000899
307 Ga0501076_0009921
308 Ga0501077_0003512
309 Ga0501079_0011863
310 Ga0501080_0002684
311 Ga0501081_0015250
312 Ga0501083_0007294
313 Ga0501083_0010113
314 Ga0501083_0179681
315 nmdc:mga05p37_343_c1
316 nmdc:mga09592_15320_c1
317 nmdc:mga09592_353_c1
318 nmdc:mga09592_8231_c1
319 nmdc:mga0qj67_162787_c1
320 nmdc:mga0qj67_21029_c1
321 nmdc:mga0qj67_541_c1
322 nmdc:mga06r32_106736_c1
323 nmdc:mga06r32_1086_c1
324 nmdc:mga08y16_8430_c1
325 nmdc:mga0rr50_90813_c1
326 Ga0495619_0027156
327 Ga0501084_0045994
328 Ga0501082_0021728
329 Ga0466962_0001859
330 Ga0530510_0034545
331 2616902117
332 2671832598
333 2774850754
334 2811849006
335 2852636702
336 2863404639
337 2873155754
338 2875395844
339 2990066453
340 8008567331

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04199

Cyclase

Putative cyclase

52

242

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ibz-assembly1.cif.gz_D crystal structure of a novel cyclase (pfam04199). 0.9163 15 305
5ibz-assembly1.cif.gz_C crystal structure of a novel cyclase (pfam04199). 0.9146 14 305
5ibz-assembly1.cif.gz_B crystal structure of a novel cyclase (pfam04199). 0.9134 11 305
5ibz-assembly1.cif.gz_A crystal structure of a novel cyclase (pfam04199). 0.9123 11 305
5ibz-assembly1.cif.gz_D crystal structure of a novel cyclase (pfam04199). 0.8865 15 305
ID Description Score Start End Superfamily
af_Q2G123_4_245_3.50.30.50 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Putative cyclase 0.7844 46 304 3.50.30.50
4cobB00 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Putative cyclase 0.7835 48 303 3.50.30.50
3krvB00 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Putative cyclase 0.7817 48 303 3.50.30.50
4cobB00 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Putative cyclase 0.7662 48 303 3.50.30.50
3krvB00 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Putative cyclase 0.753 48 303 3.50.30.50
ID Description Score Start End GO Terms
AF-A0A538HFV1-F1-model_v4 Cyclase family protein 0.986 1 305 GO:0004061
GO:0019441
AF-A0A538HFV1-F1-model_v4 Cyclase family protein 0.9828 1 305 GO:0004061
GO:0019441
AF-A0A2E9GQI2-F1-model_v4 Cyclase 0.9825 2 305 GO:0004061
GO:0019441
AF-A0A6G2KRL9-F1-model_v4 deleted 0.9779 1 305
AF-A0A2E9GQI2-F1-model_v4 Cyclase 0.9761 2 305 GO:0004061
GO:0019441

Map