F256487

General Info

Members Datasets Scaffolds Average Seq Length
170 119 340 294

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10035849|Ga0075365_100358492
Length 324
Sequence MTMSQTMHKMPQTMNRDKPAGTAAATGDENMISPAFPYQKQRRRVLGREMAYVEVGDGDPIVLLHGNPTSSYLWRNVLPHLQPLGRCIAPDLIGMGDSDKLPDSGPGSYRFVEHRRYLDALLEALDVHKRVTFVIHDWGSALGFDWANRHREAVKGIAFMEAIVAPQGRGHWDKMGMGPALEALRSEAGEAMVLQNNYFIEEILPNAILRQLSDQEMAEYRRPFATPGEGRRPTLTWPRQIPIEGEPADVSAIAAEYANWLGTSNVPKLFLKAEPGAILANDTLVNLVRGWPALTEKTVAGIHFVQEDSPDEIGRAIAGWMSKL

Samples

Sample ID Description Type Environment
1 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
42 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
43 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
61 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
74 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
80 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
92 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
93 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
109 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
110 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
111 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
112 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
113 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
117 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
118 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
119 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.24
Metatranscriptomes 0
Isolates 1.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.59
Nodule 1.18
Rhizoplane 2.94
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 12.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075365_10035849 3300006038 Bacteria 3212
2 rootL2_10109960 3300003322 Bacteria 3250
3 rootH1_10142172 3300003323 Bacteria 3442
4 rootH1_10173643 3300003323 Bacteria 2967
5 JGI25160J50197_1000686 3300003354 Bacteria 18746
6 JGI25405J52794_10028139 3300003911 Bacteria 1159
7 Ga0055543_1018391 3300004625 Bacteria 1304
8 Ga0070669_100107313 3300005353 Bacteria 2115
9 Ga0070709_10345126 3300005434 Unclassified 1098
10 Ga0070714_100242121 3300005435 Unclassified 1665
11 Ga0070714_100302881 3300005435 Bacteria 1490
12 Ga0070713_100163709 3300005436 Unclassified 1987
13 Ga0070711_100007823 3300005439 Bacteria 6513
14 Ga0070711_100058522 3300005439 Unclassified 2672
15 Ga0070708_100000578 3300005445 Bacteria 27450
16 Ga0070708_100001656 3300005445 Bacteria 17078
17 Ga0070708_100026444 3300005445 Bacteria 4967
18 Ga0070706_100014287 3300005467 Bacteria 7337
19 Ga0070707_100018451 3300005468 Bacteria 6563
20 Ga0070707_100115304 3300005468 Bacteria 2607
21 Ga0070707_100384910 3300005468 Bacteria 1362
22 Ga0070707_100702038 3300005468 Bacteria 974
23 Ga0070698_100001789 3300005471 Bacteria 23908
24 Ga0070698_100020089 3300005471 Bacteria 7002
25 Ga0070698_100021548 3300005471 Bacteria 6749
26 Ga0070698_100080585 3300005471 Unclassified 3250
27 Ga0070698_100151300 3300005471 Bacteria 2268
28 Ga0070698_100154420 3300005471 Bacteria 2241
29 Ga0070698_100757056 3300005471 Bacteria 914
30 Ga0070699_100005530 3300005518 Bacteria 11074
31 Ga0070699_100010503 3300005518 Bacteria 8010
32 Ga0070684_100138179 3300005535 Bacteria 2202
33 Ga0070697_100011870 3300005536 Bacteria 6818
34 Ga0070697_100208942 3300005536 Bacteria 1661
35 Ga0070697_100402844 3300005536 Bacteria 1187
36 Ga0070686_100183606 3300005544 Bacteria 1488
37 Ga0070704_100644705 3300005549 Bacteria 935
38 Ga0068858_100622092 3300005842 Bacteria 1048
39 Ga0068860_100324647 3300005843 Bacteria 1511
40 Ga0068862_100088256 3300005844 Bacteria 2698
41 Ga0081455_10010665 3300005937 Bacteria 9295
42 Ga0081540_1000019 3300005983 Bacteria 163281
43 Ga0081540_1000185 3300005983 Bacteria 64858
44 Ga0081540_1000274 3300005983 Bacteria 53893
45 Ga0081540_1006609 3300005983 Bacteria 8411
46 Ga0070717_10001729 3300006028 Bacteria 15238
47 Ga0070717_10359782 3300006028 Bacteria 1302
48 Ga0075362_10000861 3300006177 Bacteria 9156
49 Ga0075367_10020271 3300006178 Bacteria 3699
50 Ga0075367_10111190 3300006178 Bacteria 1682
51 Ga0075369_10000458 3300006186 Bacteria 12487
52 Ga0075370_10006510 3300006353 Bacteria 5881
53 Ga0075433_10004686 3300006852 Bacteria 10655
54 Ga0075434_100007817 3300006871 Bacteria 9908
55 Ga0075434_100099217 3300006871 Bacteria 2918
56 Ga0075434_100117858 3300006871 Unclassified 2668
57 Ga0075434_100134387 3300006871 Bacteria 2493
58 Ga0075436_100000496 3300006914 Bacteria 25425
59 Ga0075436_100003474 3300006914 Bacteria 10803
60 Ga0075435_100003657 3300007076 Bacteria 10471
61 Ga0099794_10002772 3300007265 Bacteria 6545
62 Ga0111539_10000477 3300009094 Bacteria 50528
63 Ga0105245_10643450 3300009098 Unclassified 1090
64 Ga0105243_10052585 3300009148 Bacteria 3227
65 Ga0157378_10055394 3300013297 Unclassified 3532
66 Ga0213876_10187010 3300021384 Bacteria 1101
67 Ga0213871_10018319 3300021441 Bacteria 1712
68 Ga0209025_1068473 3300025294 Bacteria 1275
69 Ga0207653_10012362 3300025885 Bacteria 2665
70 Ga0207653_10019522 3300025885 Bacteria 2137
71 Ga0207692_10011195 3300025898 Unclassified 3806
72 Ga0207684_10002546 3300025910 Bacteria 18302
73 Ga0207684_10004134 3300025910 Bacteria 13820
74 Ga0207684_10004624 3300025910 Bacteria 12926
75 Ga0207684_10025630 3300025910 Bacteria 5026
76 Ga0207652_10149682 3300025921 Bacteria 2089
77 Ga0207646_10006032 3300025922 Bacteria 12626
78 Ga0207646_10014866 3300025922 Bacteria 7373
79 Ga0207646_10017716 3300025922 Bacteria 6655
80 Ga0207646_10084514 3300025922 Bacteria 2840
81 Ga0207681_10134245 3300025923 Bacteria 1834
82 Ga0207659_10307619 3300025926 Bacteria 1304
83 Ga0207700_10118521 3300025928 Unclassified 2142
84 Ga0207690_10293958 3300025932 Unclassified 1269
85 Ga0207709_10028288 3300025935 Bacteria 3240
86 Ga0207670_10288212 3300025936 Unclassified 1282
87 Ga0207678_10188784 3300026067 Unclassified 1761
88 Ga0207674_10433035 3300026116 Bacteria 1271
89 Ga0207683_10239992 3300026121 Bacteria 1653
90 Ga0207428_10000053 3300027907 Bacteria 175238
91 Ga0207428_10186334 3300027907 Bacteria 1566
92 Ga0268265_10202586 3300028380 Unclassified 1723
93 Ga0268265_10339456 3300028380 Bacteria 1367
94 Ga0307513_10211844 3300031456 Bacteria 1768
95 Ga0373932_0076001 3300035112 Bacteria 1052
96 Ga0242420_018120 3300038996 Bacteria 1238
97 Ga0436365_0405719 3300039437 Bacteria 7289
98 Ga0436360_0845232 3300039438 Bacteria 3345
99 Ga0436360_1047660 3300039438 Bacteria 13444
100 Ga0436361_0211223 3300039447 Bacteria 2633
101 Ga0436361_0787757 3300039447 Bacteria 4385
102 Ga0436361_1040524 3300039447 Unclassified 1105
103 Ga0466972_0043235 3300044658 Bacteria 2188
104 Ga0466965_0001736 3300044683 Bacteria 8982
105 Ga0466968_0001780 3300044735 Bacteria 7771
106 Ga0466960_0007816 3300044901 Bacteria 4360
107 Ga0466967_0105485 3300045976 Bacteria 2582
108 Ga0466967_0406688 3300045976 Bacteria 1325
109 Ga0495651_0165711 3300046462 Bacteria 1578
110 Ga0495580_0260768 3300046472 Bacteria 1185
111 Ga0495664_0146899 3300046477 Bacteria 1430
112 Ga0495637_0112890 3300046520 Bacteria 1052
113 Ga0495667_0213142 3300046559 Bacteria 1234
114 Ga0495657_0355188 3300046675 Bacteria 867
115 Ga0495672_0101224 3300047320 Bacteria 1562
116 Ga0496104_0072977 3300048907 Bacteria 3265
117 Ga0496111_0486852 3300048914 Unclassified 908
118 Ga0496112_0133316 3300048915 Unclassified 2455
119 Ga0496114_0286315 3300048917 Bacteria 1453
120 Ga0496115_0279294 3300048918 Bacteria 1371
121 Ga0496121_0004896 3300048924 Bacteria 17575
122 Ga0496126_0260781 3300048929 Bacteria 1441
123 Ga0501033_0005461 3300049570 Bacteria 10070
124 Ga0501034_0039806 3300049571 Bacteria 4760
125 Ga0501037_0008378 3300049573 Bacteria 7580
126 Ga0501043_0239423 3300049579 Unclassified 1400
127 Ga0501046_0024659 3300049580 Unclassified 4929
128 Ga0501047_0045601 3300049581 Bacteria 4239
129 Ga0501071_0303857 3300049587 Bacteria 1210
130 Ga0501076_0394312 3300049592 Bacteria 1138
131 Ga0501077_0039783 3300049593 Bacteria 2995
132 Ga0501079_0212462 3300049741 Unclassified 1511
133 Ga0501079_0414257 3300049741 Bacteria 1057
134 Ga0501080_0285290 3300049742 Bacteria 1500
135 Ga0501081_0173534 3300049743 Bacteria 1557
136 Ga0501044_0000192 3300049823 Bacteria 77316
137 Ga0501044_0002481 3300049823 Bacteria 21043
138 Ga0501044_0015574 3300049823 Bacteria 8193
139 Ga0501044_0082947 3300049823 Bacteria 3242
140 nmdc:mga03683_1916_c1 3300050489 Bacteria 6356
141 nmdc:mga0yw44_69399_c1 3300050492 Bacteria 2183
142 nmdc:mga06z11_19876_c1 3300050494 Bacteria 3096
143 nmdc:mga07m45_1375_c1 3300050496 Bacteria 11088
144 nmdc:mga05p37_13349_c1 3300050507 Bacteria 9840
145 nmdc:mga06r32_14595_c1 3300050510 Bacteria 7132
146 nmdc:mga08y16_229587_c1 3300050511 Bacteria 1920
147 nmdc:mga08y16_30_c1 3300050511 Bacteria 197110
148 nmdc:mga0n895_161605_c1 3300050512 Bacteria 2272
149 nmdc:mga0n895_273636_c1 3300050512 Bacteria 1713
150 nmdc:mga0n895_393163_c1 3300050512 Bacteria 1402
151 nmdc:mga0n895_5962_c1 3300050512 Bacteria 10257
152 nmdc:mga0rr50_2369_c1 3300050513 Bacteria 10601
153 nmdc:mga08x19_2369_c1 3300050514 Bacteria 11415
154 nmdc:mga08x19_6277_c1 3300050514 Bacteria 7035
155 nmdc:mga0a205_22860_c1 3300050515 Bacteria 5928
156 nmdc:mga0a205_4956_c1 3300050515 Bacteria 11972
157 nmdc:mga0sz30_1364_c1 3300050516 Bacteria 8729
158 Ga0495601_0214838 3300053077 Unclassified 1256
159 Ga0500651_0156297 3300053093 Bacteria 1366
160 Ga0500556_0046366 3300053104 Bacteria 1555
161 Ga0500595_011292 3300053119 Bacteria 3503
162 Ga0500637_0133561 3300053178 Bacteria 1438
163 Ga0501084_0112981 3300054114 Bacteria 2283
164 Ga0501084_0208353 3300054114 Bacteria 1649
165 Ga0501082_0227528 3300060353 Bacteria 1623
166 Ga0530510_0058073 3300061734 Bacteria 2797
167 Ga0530510_0164951 3300061734 Unclassified 1639
168 2513722232 2513237104 Bacteria 10034502
169 2513892493 2513237141 Bacteria 8496279
170 2885386140 2885383462 Bacteria 9473874
171 Ga0075365_10035849
172 rootL2_10109960
173 rootH1_10142172
174 rootH1_10173643
175 JGI25160J50197_1000686
176 JGI25405J52794_10028139
177 Ga0055543_1018391
178 Ga0070669_100107313
179 Ga0070709_10345126
180 Ga0070714_100242121
181 Ga0070714_100302881
182 Ga0070713_100163709
183 Ga0070711_100007823
184 Ga0070711_100058522
185 Ga0070708_100000578
186 Ga0070708_100001656
187 Ga0070708_100026444
188 Ga0070706_100014287
189 Ga0070707_100018451
190 Ga0070707_100115304
191 Ga0070707_100384910
192 Ga0070707_100702038
193 Ga0070698_100001789
194 Ga0070698_100020089
195 Ga0070698_100021548
196 Ga0070698_100080585
197 Ga0070698_100151300
198 Ga0070698_100154420
199 Ga0070698_100757056
200 Ga0070699_100005530
201 Ga0070699_100010503
202 Ga0070684_100138179
203 Ga0070697_100011870
204 Ga0070697_100208942
205 Ga0070697_100402844
206 Ga0070686_100183606
207 Ga0070704_100644705
208 Ga0068858_100622092
209 Ga0068860_100324647
210 Ga0068862_100088256
211 Ga0081455_10010665
212 Ga0081540_1000019
213 Ga0081540_1000185
214 Ga0081540_1000274
215 Ga0081540_1006609
216 Ga0070717_10001729
217 Ga0070717_10359782
218 Ga0075362_10000861
219 Ga0075367_10020271
220 Ga0075367_10111190
221 Ga0075369_10000458
222 Ga0075370_10006510
223 Ga0075433_10004686
224 Ga0075434_100007817
225 Ga0075434_100099217
226 Ga0075434_100117858
227 Ga0075434_100134387
228 Ga0075436_100000496
229 Ga0075436_100003474
230 Ga0075435_100003657
231 Ga0099794_10002772
232 Ga0111539_10000477
233 Ga0105245_10643450
234 Ga0105243_10052585
235 Ga0157378_10055394
236 Ga0213876_10187010
237 Ga0213871_10018319
238 Ga0209025_1068473
239 Ga0207653_10012362
240 Ga0207653_10019522
241 Ga0207692_10011195
242 Ga0207684_10002546
243 Ga0207684_10004134
244 Ga0207684_10004624
245 Ga0207684_10025630
246 Ga0207652_10149682
247 Ga0207646_10006032
248 Ga0207646_10014866
249 Ga0207646_10017716
250 Ga0207646_10084514
251 Ga0207681_10134245
252 Ga0207659_10307619
253 Ga0207700_10118521
254 Ga0207690_10293958
255 Ga0207709_10028288
256 Ga0207670_10288212
257 Ga0207678_10188784
258 Ga0207674_10433035
259 Ga0207683_10239992
260 Ga0207428_10000053
261 Ga0207428_10186334
262 Ga0268265_10202586
263 Ga0268265_10339456
264 Ga0307513_10211844
265 Ga0373932_0076001
266 Ga0242420_018120
267 Ga0436365_0405719
268 Ga0436360_0845232
269 Ga0436360_1047660
270 Ga0436361_0211223
271 Ga0436361_0787757
272 Ga0436361_1040524
273 Ga0466972_0043235
274 Ga0466965_0001736
275 Ga0466968_0001780
276 Ga0466960_0007816
277 Ga0466967_0105485
278 Ga0466967_0406688
279 Ga0495651_0165711
280 Ga0495580_0260768
281 Ga0495664_0146899
282 Ga0495637_0112890
283 Ga0495667_0213142
284 Ga0495657_0355188
285 Ga0495672_0101224
286 Ga0496104_0072977
287 Ga0496111_0486852
288 Ga0496112_0133316
289 Ga0496114_0286315
290 Ga0496115_0279294
291 Ga0496121_0004896
292 Ga0496126_0260781
293 Ga0501033_0005461
294 Ga0501034_0039806
295 Ga0501037_0008378
296 Ga0501043_0239423
297 Ga0501046_0024659
298 Ga0501047_0045601
299 Ga0501071_0303857
300 Ga0501076_0394312
301 Ga0501077_0039783
302 Ga0501079_0212462
303 Ga0501079_0414257
304 Ga0501080_0285290
305 Ga0501081_0173534
306 Ga0501044_0000192
307 Ga0501044_0002481
308 Ga0501044_0015574
309 Ga0501044_0082947
310 nmdc:mga03683_1916_c1
311 nmdc:mga0yw44_69399_c1
312 nmdc:mga06z11_19876_c1
313 nmdc:mga07m45_1375_c1
314 nmdc:mga05p37_13349_c1
315 nmdc:mga06r32_14595_c1
316 nmdc:mga08y16_229587_c1
317 nmdc:mga08y16_30_c1
318 nmdc:mga0n895_161605_c1
319 nmdc:mga0n895_273636_c1
320 nmdc:mga0n895_393163_c1
321 nmdc:mga0n895_5962_c1
322 nmdc:mga0rr50_2369_c1
323 nmdc:mga08x19_2369_c1
324 nmdc:mga08x19_6277_c1
325 nmdc:mga0a205_22860_c1
326 nmdc:mga0a205_4956_c1
327 nmdc:mga0sz30_1364_c1
328 Ga0495601_0214838
329 Ga0500651_0156297
330 Ga0500556_0046366
331 Ga0500595_011292
332 Ga0500637_0133561
333 Ga0501084_0112981
334 Ga0501084_0208353
335 Ga0501082_0227528
336 Ga0530510_0058073
337 Ga0530510_0164951
338 2513722232
339 2513892493
340 2885386140

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

59

310

0.95

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

61

316

0.54

Structural Annotation

Top 5 Hits

ID Description Score Start End
4h7d-assembly1.cif.gz_A crystal structure of haloalkane dehalogenase linb t81a mutant from sphingobium sp. mi1205 0.9725 1 294
4h7f-assembly1.cif.gz_A crystal structure of haloalkane dehalogenase linb v134i mutant from sphingobium sp. mi1205 0.9724 1 294
7pw1-assembly1.cif.gz_A crystal structure of ancestral haloalkane dehalogenase anclinb-dmba 0.9711 3 294
4h7h-assembly1.cif.gz_A crystal structure of haloalkane dehalogenase linb t135a mutant from sphingobium sp. mi1205 0.9711 1 294
4wdr-assembly2.cif.gz_B crystal structure of haloalkane dehalogenase linb 140a+143l+177w+211l mutant (linb86) from sphingobium japonicum ut26 0.9705 3 294
ID Description Score Start End Superfamily
4brzA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9683 10 294 3.40.50.1820
4brzA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9454 10 294 3.40.50.1820
5mxpA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9441 6 293 3.40.50.1820
2psfB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.937 10 294 3.40.50.1820
4kaaB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9344 1 295 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A2E7PEU5-F1-model_v4 Haloalkane dehalogenase (EC 3.8.1.5) 0.9805 2 294 GO:0018786
AF-A0A382N2A4-F1-model_v4 Haloalkane dehalogenase 0.9785 107 294
AF-A0A6L7NL70-F1-model_v4 Haloalkane dehalogenase (EC 3.8.1.5) 0.9776 22 294 GO:0016020
GO:0018786
AF-A0A2V7GHE8-F1-model_v4 Haloalkane dehalogenase (EC 3.8.1.5) 0.9772 2 295 GO:0018786
AF-A0A2E7PEU5-F1-model_v4 Haloalkane dehalogenase (EC 3.8.1.5) 0.9771 2 294 GO:0018786

Map