F253365

General Info

Members Datasets Scaffolds Average Seq Length
168 132 166 188

Family's Representative Sequence

Representative Sequence 3300047319|Ga0495674_0110175|Ga0495674_0110175_540_1256
Length 214
Sequence MADKNAKDAKAKKPAKPQGGDAAQAGAKVVRDPNYVPRFKKRYEEVIRPGLQKEFGYTNPLQAPRIKKIVLNIGAGEAAGDQKKIQSAVNDLTAIAGQKAVITRAKKAIATFKIRHGLPIGVKVTLRKDRMYEFLDRLVTMALPRVRDFRGLNGKSFDGNGNYALGMKEHIVFVEIDYDKTENVWGMDIIINTSARTDAEAKALLKGFQFPFMS

Samples

Sample ID Description Type Environment
1 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
2 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
39 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300030888 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
61 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
62 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
71 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
72 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
73 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
74 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
75 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
77 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300036457 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
89 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
97 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
101 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
109 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
124 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
125 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
126 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
127 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
128 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 5.95
Isolates 1.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.19
Nodule 0
Rhizoplane 4.76
Rhizosphere 85.12
Stem 0
Stem Tuber 0
Unclassified 8.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10121635 3300003203 Bacteria 768
2 JGI25405J52794_10009740 3300003911 Bacteria 1819
3 Ga0065707_10487817 3300005295 Bacteria 768
4 Ga0068868_100055857 3300005338 Bacteria 3117
5 Ga0070689_100225565 3300005340 Bacteria 1538
6 Ga0070687_100639378 3300005343 Bacteria 736
7 Ga0070661_101226564 3300005344 Bacteria 628
8 Ga0070714_100273243 3300005435 Bacteria 1568
9 Ga0070701_10286532 3300005438 Bacteria 1008
10 Ga0070708_100736698 3300005445 Bacteria 927
11 Ga0070681_10369881 3300005458 Bacteria 1344
12 Ga0070679_100280773 3300005530 Bacteria 1618
13 Ga0068853_100173535 3300005539 Bacteria 1952
14 Ga0070665_100712331 3300005548 Bacteria 1017
15 Ga0068855_100065689 3300005563 Bacteria 4230
16 Ga0068857_100129652 3300005577 Bacteria 2274
17 Ga0068856_100637086 3300005614 Bacteria 1087
18 Ga0068856_101230801 3300005614 Bacteria 765
19 Ga0070702_100199784 3300005615 Bacteria 1323
20 Ga0068861_100154204 3300005719 Bacteria 1888
21 Ga0068863_100199157 3300005841 Bacteria 1926
22 Ga0081455_10000156 3300005937 Bacteria 82406
23 Ga0081455_10181354 3300005937 Bacteria 1593
24 Ga0081540_1003884 3300005983 Bacteria 11644
25 Ga0081539_10020546 3300005985 Bacteria 4457
26 Ga0081539_10160338 3300005985 Bacteria 1072
27 Ga0070717_10239167 3300006028 Bacteria 1600
28 Ga0070717_10442334 3300006028 Bacteria 1171
29 Ga0075428_100009144 3300006844 Bacteria 10996
30 Ga0075429_100696287 3300006880 Bacteria 890
31 Ga0105245_10090105 3300009098 Bacteria 2820
32 Ga0105245_11317656 3300009098 Bacteria 771
33 Ga0114129_10708125 3300009147 Bacteria 1293
34 Ga0114129_10880576 3300009147 Bacteria 1136
35 Ga0114129_10988311 3300009147 Bacteria 1061
36 Ga0114129_11004906 3300009147 Bacteria 1050
37 Ga0114129_12008661 3300009147 Bacteria 699
38 Ga0105241_10058137 3300009174 Bacteria 2969
39 Ga0105241_10913678 3300009174 Bacteria 816
40 Ga0105237_10056200 3300009545 Bacteria 3940
41 Ga0105237_10078089 3300009545 Bacteria 3300
42 Ga0105237_11033092 3300009545 Bacteria 829
43 Ga0105238_10011584 3300009551 Bacteria 8885
44 Ga0105238_10012597 3300009551 Bacteria 8537
45 Ga0105238_10558422 3300009551 Bacteria 1150
46 Ga0105239_10044563 3300010375 Bacteria 4863
47 Ga0105239_10288316 3300010375 Bacteria 1849
48 Ga0105239_10469724 3300010375 Bacteria 1428
49 Ga0157370_10406430 3300013104 Bacteria 1253
50 Ga0157372_10984902 3300013307 Bacteria 977
51 Ga0182008_10089273 3300014497 Bacteria 1519
52 Ga0182007_10045770 3300015262 Bacteria 1450
53 Ga0206356_11713766 3300020070 Bacteria 755
54 Ga0206352_10650957 3300020078 Bacteria 678
55 Ga0213872_10002389 3300021361 Bacteria 11095
56 Ga0213875_10023977 3300021388 Bacteria 2911
57 Ga0213871_10035973 3300021441 Bacteria 1312
58 Ga0207654_10027464 3300025911 Bacteria 3093
59 Ga0207654_10173650 3300025911 Bacteria 1401
60 Ga0207707_10470001 3300025912 Bacteria 1075
61 Ga0207695_10010441 3300025913 Bacteria 11360
62 Ga0207660_10497342 3300025917 Bacteria 989
63 Ga0207694_10022428 3300025924 Bacteria 4789
64 Ga0207694_10058395 3300025924 Bacteria 3001
65 Ga0207687_10044790 3300025927 Bacteria 3056
66 Ga0207689_10417894 3300025942 Bacteria 1119
67 Ga0207667_10096384 3300025949 Bacteria 3053
68 Ga0207639_10060119 3300026041 Bacteria 2931
69 Ga0207702_10594253 3300026078 Bacteria 1086
70 Ga0207702_10970079 3300026078 Bacteria 843
71 Ga0207641_10215049 3300026088 Bacteria 1779
72 Ga0207674_10144435 3300026116 Bacteria 2338
73 Ga0207675_100188837 3300026118 Bacteria 1975
74 Ga0209974_10083912 3300027876 Bacteria 1099
75 Ga0307515_10487920 3300028794 Bacteria 844
76 Ga0265769_102699 3300030888 Bacteria 946
77 Ga0265329_10167933 3300031242 Bacteria 715
78 Ga0265339_10103534 3300031249 Bacteria 1479
79 Ga0265331_10076970 3300031250 Bacteria 1555
80 Ga0265331_10201079 3300031250 Bacteria 897
81 Ga0265313_10114700 3300031595 Bacteria 1181
82 Ga0265314_10018895 3300031711 Bacteria 5351
83 Ga0265342_10094200 3300031712 Bacteria 1714
84 Ga0307406_10087722 3300031901 Bacteria 2086
85 Ga0307412_10661286 3300031911 Bacteria 892
86 Ga0307416_100536105 3300032002 Bacteria 1241
87 Ga0316588_1000502 3300033528 Bacteria 5370
88 Ga0373926_0042678 3300035083 Bacteria 1622
89 Ga0373945_0006653 3300035116 Bacteria 3735
90 Ga0373943_0293611 3300035170 Bacteria 921
91 Ga0373946_0087761 3300035171 Bacteria 1373
92 Ga0373931_0245169 3300035691 Bacteria 1087
93 Ga0373935_0003403 3300035692 Bacteria 9238
94 Ga0373927_0093543 3300035695 Bacteria 1953
95 Ga0373927_0453742 3300035695 Bacteria 847
96 Ga0373933_0064942 3300035724 Bacteria 2209
97 Ga0373947_0011709 3300035725 Bacteria 5027
98 Ga0373937_0878388 3300036401 Bacteria 845
99 Ga0265778_049021 3300036457 Bacteria 575
100 Ga0373925_0002514 3300037068 Bacteria 14651
101 Ga0373925_0312149 3300037068 Bacteria 1271
102 Ga0436364_0536698 3300037853 Bacteria 692
103 Ga0436364_0764338 3300037853 Bacteria 31107
104 Ga0436364_1010401 3300037853 Bacteria 923
105 Ga0436364_1201477 3300037853 Bacteria 1315
106 Ga0436365_0355817 3300039437 Bacteria 663
107 Ga0436365_1123890 3300039437 Bacteria 987
108 Ga0436365_1201839 3300039437 Bacteria 1282
109 Ga0436360_1141041 3300039438 Bacteria 740
110 Ga0436361_0407713 3300039447 Bacteria 104420
111 Ga0436361_0543175 3300039447 Bacteria 854
112 Ga0436363_0075840 3300039450 Bacteria 701
113 Ga0436363_0710685 3300039450 Bacteria 1551
114 Ga0436363_0917440 3300039450 Bacteria 690
115 Ga0436362_0015265 3300039453 Bacteria 1685
116 Ga0436362_0077201 3300039453 Bacteria 635
117 Ga0436362_0209835 3300039453 Bacteria 682
118 Ga0451800_0744224 3300041459 Bacteria 759
119 Ga0451853_1134555 3300041512 Bacteria 847
120 Ga0453684_0173127 3300044712 Bacteria 2542
121 Ga0466967_1446017 3300045976 Bacteria 685
122 Ga0495651_0442846 3300046462 Bacteria 841
123 Ga0495580_0003736 3300046472 Bacteria 12895
124 Ga0495645_0342013 3300046543 Bacteria 966
125 Ga0495667_0041287 3300046559 Bacteria 3060
126 Ga0495599_0278181 3300046678 Bacteria 1014
127 Ga0495647_0265872 3300046681 Bacteria 766
128 Ga0495658_0001492 3300046683 Bacteria 12268
129 Ga0495613_0169492 3300046689 Bacteria 1550
130 Ga0495624_0096924 3300046690 Bacteria 1817
131 Ga0495589_0039376 3300046794 Bacteria 2362
132 Ga0495674_0110175 3300047319 Bacteria 2335
133 Ga0495676_0031746 3300047321 Bacteria 4463
134 Ga0495684_0239270 3300047471 Bacteria 1325
135 Ga0495684_0383680 3300047471 Bacteria 990
136 Ga0496104_0533836 3300048907 Bacteria 1084
137 Ga0496105_0029379 3300048908 Bacteria 4500
138 Ga0496108_0363727 3300048911 Bacteria 1263
139 Ga0496111_0658156 3300048914 Bacteria 764
140 Ga0496112_1237058 3300048915 Unclassified 663
141 Ga0496114_0015937 3300048917 Bacteria 6049
142 Ga0496115_0082968 3300048918 Bacteria 2612
143 Ga0496126_0123506 3300048929 Bacteria 2243
144 Ga0501033_0022621 3300049570 Bacteria 4742
145 Ga0501034_0009257 3300049571 Bacteria 10322
146 Ga0501034_0666097 3300049571 Bacteria 941
147 Ga0501046_0003325 3300049580 Bacteria 14782
148 Ga0501047_0041758 3300049581 Bacteria 4431
149 Ga0501070_0447124 3300049586 Bacteria 1042
150 Ga0501071_0584358 3300049587 Bacteria 858
151 Ga0501072_0467674 3300049588 Bacteria 998
152 Ga0501079_0498447 3300049741 Bacteria 957
153 Ga0501044_0041067 3300049823 Bacteria 4816
154 Ga0501045_0677368 3300049824 Bacteria 761
155 nmdc:mga07m45_62473_c1 3300050496 Bacteria 1617
156 Ga0495601_0004469 3300053077 Bacteria 8082
157 Ga0495595_0032286 3300053084 Bacteria 2358
158 Ga0495595_0213395 3300053084 Bacteria 962
159 Ga0495619_0023386 3300053085 Bacteria 3962
160 Ga0495619_0122495 3300053085 Bacteria 1783
161 Ga0500555_041782 3300053103 Bacteria 1275
162 Ga0587066_092041 3300059490 Bacteria 675
163 Ga0587077_002835 3300059493 Bacteria 2114
164 Ga0587062_067092 3300059639 Bacteria 642
165 Ga0587067_018322 3300059640 Bacteria 1173
166 Ga0587068_085171 3300059641 Bacteria 644

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039447 Ga0436361_0543175 Ga0436361_0543175_293_823 152
2 3300046559 Ga0495667_0041287 Ga0495667_0041287_246_788 157
3 3300047471 Ga0495684_0239270 Ga0495684_0239270_359_901 157
4 3300005985 Ga0081539_10160338 Ga0081539_101603382 159
5 3300039453 Ga0436362_0077201 Ga0436362_0077201_77_619 160
6 3300036457 Ga0265778_049021 Ga0265778_049021_11_511 164
7 3300049587 Ga0501071_0584358 Ga0501071_0584358_125_706 174
8 3300049741 Ga0501079_0498447 Ga0501079_0498447_71_652 174
9 3300049824 Ga0501045_0677368 Ga0501045_0677368_104_685 174
10 3300037853 Ga0436364_1010401 Ga0436364_1010401_383_913 175
11 3300046690 Ga0495624_0096924 Ga0495624_0096924_1187_1744 176
12 3300005343 Ga0070687_100639378 Ga0070687_1006393781 179
13 3300005445 Ga0070708_100736698 Ga0070708_1007366982 179
14 3300005614 Ga0068856_101230801 Ga0068856_1012308011 179
15 3300006028 Ga0070717_10239167 Ga0070717_102391672 179
16 3300006028 Ga0070717_10442334 Ga0070717_104423342 179
17 3300006844 Ga0075428_100009144 Ga0075428_1000091447 179
18 3300006880 Ga0075429_100696287 Ga0075429_1006962871 179
19 3300009147 Ga0114129_10988311 Ga0114129_109883112 179
20 3300009147 Ga0114129_11004906 Ga0114129_110049061 179
21 3300009174 Ga0105241_10913678 Ga0105241_109136782 179
22 3300009545 Ga0105237_10078089 Ga0105237_100780892 179
23 3300009545 Ga0105237_11033092 Ga0105237_110330922 179
24 3300009551 Ga0105238_10558422 Ga0105238_105584221 179
25 3300010375 Ga0105239_10469724 Ga0105239_104697243 179
26 3300014497 Ga0182008_10089273 Ga0182008_100892732 179
27 3300020070 Ga0206356_11713766 Ga0206356_117137661 179
28 3300020078 Ga0206352_10650957 Ga0206352_106509571 179
29 3300026078 Ga0207702_10970079 Ga0207702_109700791 179
30 3300035724 Ga0373933_0064942 Ga0373933_0064942_485_1024 179
31 3300036401 Ga0373937_0878388 Ga0373937_0878388_202_741 179
32 3300037853 Ga0436364_1201477 Ga0436364_1201477_125_667 179
33 3300039437 Ga0436365_0355817 Ga0436365_0355817_20_559 179
34 3300039437 Ga0436365_1123890 Ga0436365_1123890_418_960 179
35 3300039437 Ga0436365_1201839 Ga0436365_1201839_83_622 179
36 3300039438 Ga0436360_1141041 Ga0436360_1141041_111_653 179
37 3300039450 Ga0436363_0075840 Ga0436363_0075840_108_650 179
38 3300039450 Ga0436363_0710685 Ga0436363_0710685_924_1481 179
39 3300039450 Ga0436363_0917440 Ga0436363_0917440_100_642 179
40 3300041512 Ga0451853_1134555 Ga0451853_1134555_200_742 179
41 3300045976 Ga0466967_1446017 Ga0466967_1446017_106_654 179
42 3300046462 Ga0495651_0442846 Ga0495651_0442846_149_691 179
43 3300046678 Ga0495599_0278181 Ga0495599_0278181_248_790 179
44 3300048907 Ga0496104_0533836 Ga0496104_0533836_270_812 179
45 3300048908 Ga0496105_0029379 Ga0496105_0029379_2999_3541 179
46 3300048911 Ga0496108_0363727 Ga0496108_0363727_628_1170 179
47 3300048915 Ga0496112_1237058 Ga0496112_1237058_15_557 179
48 3300048917 Ga0496114_0015937 Ga0496114_0015937_2846_3388 179
49 3300048918 Ga0496115_0082968 Ga0496115_0082968_1133_1675 179
50 3300053077 Ga0495601_0004469 Ga0495601_0004469_4390_4932 179
51 3300053084 Ga0495595_0032286 Ga0495595_0032286_1707_2249 179
52 3300053084 Ga0495595_0213395 Ga0495595_0213395_209_751 179
53 3300053085 Ga0495619_0023386 Ga0495619_0023386_3260_3802 179
54 3300053085 Ga0495619_0122495 Ga0495619_0122495_459_1001 179
55 3300053103 Ga0500555_041782 Ga0500555_041782_504_1052 179
56 3300059490 Ga0587066_092041 Ga0587066_092041_88_636 179
57 3300059493 Ga0587077_002835 Ga0587077_002835_1332_1880 179
58 3300059639 Ga0587062_067092 Ga0587062_067092_18_560 179
59 3300059640 Ga0587067_018322 Ga0587067_018322_234_788 179
60 3300059641 Ga0587068_085171 Ga0587068_085171_43_585 179
61 iso_pu_bacteria 2896184354 2896185218 179
62 3300003203 JGI25406J46586_10121635 JGI25406J46586_101216351 180
63 3300003911 JGI25405J52794_10009740 JGI25405J52794_100097402 180
64 3300005295 Ga0065707_10487817 Ga0065707_104878172 180
65 3300005338 Ga0068868_100055857 Ga0068868_1000558573 180
66 3300005340 Ga0070689_100225565 Ga0070689_1002255653 180
67 3300005344 Ga0070661_101226564 Ga0070661_1012265641 180
68 3300005435 Ga0070714_100273243 Ga0070714_1002732433 180
69 3300005438 Ga0070701_10286532 Ga0070701_102865321 180
70 3300005458 Ga0070681_10369881 Ga0070681_103698811 180
71 3300005530 Ga0070679_100280773 Ga0070679_1002807731 180
72 3300005539 Ga0068853_100173535 Ga0068853_1001735353 180
73 3300005548 Ga0070665_100712331 Ga0070665_1007123311 180
74 3300005563 Ga0068855_100065689 Ga0068855_1000656893 180
75 3300005577 Ga0068857_100129652 Ga0068857_1001296525 180
76 3300005614 Ga0068856_100637086 Ga0068856_1006370861 180
77 3300005615 Ga0070702_100199784 Ga0070702_1001997842 180
78 3300005719 Ga0068861_100154204 Ga0068861_1001542042 180
79 3300005841 Ga0068863_100199157 Ga0068863_1001991573 180
80 3300005937 Ga0081455_10000156 Ga0081455_1000015684 180
81 3300005937 Ga0081455_10181354 Ga0081455_101813542 180
82 3300005983 Ga0081540_1003884 Ga0081540_10038846 180
83 3300005985 Ga0081539_10020546 Ga0081539_100205469 180
84 3300009098 Ga0105245_10090105 Ga0105245_100901054 180
85 3300009098 Ga0105245_11317656 Ga0105245_113176562 180
86 3300009147 Ga0114129_10708125 Ga0114129_107081252 180
87 3300009147 Ga0114129_10880576 Ga0114129_108805761 180
88 3300009147 Ga0114129_12008661 Ga0114129_120086611 180
89 3300009174 Ga0105241_10058137 Ga0105241_100581373 180
90 3300009545 Ga0105237_10056200 Ga0105237_100562006 180
91 3300009551 Ga0105238_10011584 Ga0105238_1001158415 180
92 3300009551 Ga0105238_10012597 Ga0105238_1001259711 180
93 3300010375 Ga0105239_10044563 Ga0105239_100445636 180
94 3300010375 Ga0105239_10288316 Ga0105239_102883162 180
95 3300013104 Ga0157370_10406430 Ga0157370_104064302 180
96 3300013307 Ga0157372_10984902 Ga0157372_109849021 180
97 3300015262 Ga0182007_10045770 Ga0182007_100457701 180
98 3300021361 Ga0213872_10002389 Ga0213872_100023899 180
99 3300021388 Ga0213875_10023977 Ga0213875_100239776 180
100 3300021441 Ga0213871_10035973 Ga0213871_100359732 180
101 3300025911 Ga0207654_10027464 Ga0207654_100274646 180
102 3300025911 Ga0207654_10173650 Ga0207654_101736502 180
103 3300025912 Ga0207707_10470001 Ga0207707_104700012 180
104 3300025913 Ga0207695_10010441 Ga0207695_1001044113 180
105 3300025917 Ga0207660_10497342 Ga0207660_104973422 180
106 3300025924 Ga0207694_10022428 Ga0207694_100224283 180
107 3300025924 Ga0207694_10058395 Ga0207694_100583955 180
108 3300025927 Ga0207687_10044790 Ga0207687_100447904 180
109 3300025942 Ga0207689_10417894 Ga0207689_104178941 180
110 3300025949 Ga0207667_10096384 Ga0207667_100963843 180
111 3300026041 Ga0207639_10060119 Ga0207639_100601196 180
112 3300026078 Ga0207702_10594253 Ga0207702_105942532 180
113 3300026088 Ga0207641_10215049 Ga0207641_102150493 180
114 3300026116 Ga0207674_10144435 Ga0207674_101444352 180
115 3300026118 Ga0207675_100188837 Ga0207675_1001888374 180
116 3300027876 Ga0209974_10083912 Ga0209974_100839123 180
117 3300028794 Ga0307515_10487920 Ga0307515_104879202 180
118 3300030888 Ga0265769_102699 Ga0265769_1026992 180
119 3300031242 Ga0265329_10167933 Ga0265329_101679332 180
120 3300031249 Ga0265339_10103534 Ga0265339_101035344 180
121 3300031250 Ga0265331_10076970 Ga0265331_100769703 180
122 3300031250 Ga0265331_10201079 Ga0265331_102010791 180
123 3300031595 Ga0265313_10114700 Ga0265313_101147003 180
124 3300031711 Ga0265314_10018895 Ga0265314_100188958 180
125 3300031712 Ga0265342_10094200 Ga0265342_100942004 180
126 3300031901 Ga0307406_10087722 Ga0307406_100877224 180
127 3300031911 Ga0307412_10661286 Ga0307412_106612861 180
128 3300032002 Ga0307416_100536105 Ga0307416_1005361052 180
129 3300033528 Ga0316588_1000502 Ga0316588_10005027 180
130 3300035083 Ga0373926_0042678 Ga0373926_0042678_142_858 180
131 3300035116 Ga0373945_0006653 Ga0373945_0006653_1249_1965 180
132 3300035170 Ga0373943_0293611 Ga0373943_0293611_17_733 180
133 3300035171 Ga0373946_0087761 Ga0373946_0087761_479_1195 180
134 3300035691 Ga0373931_0245169 Ga0373931_0245169_488_1030 180
135 3300035692 Ga0373935_0003403 Ga0373935_0003403_5629_6345 180
136 3300035695 Ga0373927_0093543 Ga0373927_0093543_451_1167 180
137 3300035695 Ga0373927_0453742 Ga0373927_0453742_86_793 180
138 3300035725 Ga0373947_0011709 Ga0373947_0011709_4028_4744 180
139 3300037068 Ga0373925_0002514 Ga0373925_0002514_7549_8265 180
140 3300037068 Ga0373925_0312149 Ga0373925_0312149_318_1025 180
141 3300037853 Ga0436364_0536698 Ga0436364_0536698_70_615 180
142 3300037853 Ga0436364_0764338 Ga0436364_0764338_26902_27603 180
143 3300039447 Ga0436361_0407713 Ga0436361_0407713_77499_78065 180
144 3300039453 Ga0436362_0015265 Ga0436362_0015265_763_1443 180
145 3300039453 Ga0436362_0209835 Ga0436362_0209835_105_653 180
146 3300041459 Ga0451800_0744224 Ga0451800_0744224_79_678 180
147 3300044712 Ga0453684_0173127 Ga0453684_0173127_38_583 180
148 3300046472 Ga0495580_0003736 Ga0495580_0003736_3531_4238 180
149 3300046543 Ga0495645_0342013 Ga0495645_0342013_126_845 180
150 3300046681 Ga0495647_0265872 Ga0495647_0265872_48_755 180
151 3300046683 Ga0495658_0001492 Ga0495658_0001492_7510_8217 180
152 3300046689 Ga0495613_0169492 Ga0495613_0169492_645_1352 180
153 3300046794 Ga0495589_0039376 Ga0495589_0039376_665_1363 180
154 3300047319 Ga0495674_0110175 Ga0495674_0110175_540_1256 180
155 3300047321 Ga0495676_0031746 Ga0495676_0031746_1603_2187 180
156 3300047471 Ga0495684_0383680 Ga0495684_0383680_132_839 180
157 3300048914 Ga0496111_0658156 Ga0496111_0658156_26_691 180
158 3300048929 Ga0496126_0123506 Ga0496126_0123506_462_1004 180
159 3300049570 Ga0501033_0022621 Ga0501033_0022621_4052_4696 180
160 3300049571 Ga0501034_0009257 Ga0501034_0009257_5633_6277 180
161 3300049571 Ga0501034_0666097 Ga0501034_0666097_239_820 180
162 3300049580 Ga0501046_0003325 Ga0501046_0003325_3693_4337 180
163 3300049581 Ga0501047_0041758 Ga0501047_0041758_2025_2669 180
164 3300049586 Ga0501070_0447124 Ga0501070_0447124_461_1003 180
165 3300049588 Ga0501072_0467674 Ga0501072_0467674_124_705 180
166 3300049823 Ga0501044_0041067 Ga0501044_0041067_2064_2708 180
167 3300050496 nmdc:mga07m45_62473_c1 nmdc:mga07m45_62473_c1_655_1197 180
168 iso_pu_bacteria 2671180531 2673167470 180

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00281

Ribosomal_L5

Ribosomal protein L5

59

115

0.99

PF00673

Ribosomal_L5_C

ribosomal L5P family C-terminus

119

212

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ceu-assembly1.cif.gz_f retapamulin and capreomycin bound to the 50s subunit 0.9796 3 178
5ns4-assembly2.cif.gz_B crystal structures of cy3 cyanine fluorophores stacked onto the end of double-stranded rna 0.9792 5 178
8crx-assembly1.cif.gz_f cutibacterium acnes 70s ribosome with mrna, p-site trna and sarecycline bound 0.9782 1 178
8cvm-assembly1.cif.gz_f cutibacterium acnes 50s ribosomal subunit with p-site trna and sarecycline bound in the local refined map 0.9781 1 178
5mmm-assembly1.cif.gz_F structure of the 70s chloroplast ribosome 0.9775 4 178
ID Description Score Start End Superfamily
4warF00 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9701 3 178 3.30.1440.10
4warF00 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9595 3 178 3.30.1440.10
af_A0A1D8PHY2_119_286_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9303 23 180 3.30.1440.10
af_P36519_120_288_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9295 23 178 3.30.1440.10
af_O14337_108_278_3.30.1440.10 Alpha Beta;2-Layer Sandwich;50s Ribosomal Protein L5; Chain: A,;Ribosomal protein L5 0.9193 23 174 3.30.1440.10
ID Description Score Start End GO Terms
AF-A0A520A9X5-F1-model_v4 Multifunctional fusion protein [Includes: Large ribosomal subunit protein uL24; Large ribosomal subunit protein uL5] 0.9998 51 178 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-W4TLS3-F1-model_v4 deleted 0.9944 52 180
AF-A0A351CMI8-F1-model_v4 50S ribosomal protein L5 0.9929 57 180 GO:0003735
GO:0005840
GO:0006412
GO:1990904
AF-A0A3A4NVN9-F1-model_v4 Large ribosomal subunit protein uL5 0.9928 1 180 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904
AF-A0A4Q2UB00-F1-model_v4 Large ribosomal subunit protein uL5 0.9922 1 180 GO:0000049
GO:0003735
GO:0005840
GO:0006412
GO:0019843
GO:1990904

Feature Viewer

pLDDT pTM Quality
78.98 0.74 High
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Predicted Structure (AlphaFold2)

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