F252569

General Info

Members Datasets Scaffolds Average Seq Length
168 123 336 230

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10050553|Ga0114129_100505534
Length 272
Sequence MTESRDTMSLAREAAGSDAALRPPQRHPSEPPVEPAPSAWAFPPVGLADESGVVAVGGDLEPGTILAAYRRGLFPMPLGRRGELGWWSPDPRGIIPLQGLQISRSLRQSCRRYEVRVDTAFEAVIEACADPTRPDGWITPEMQAGYVRLHELGWAHSVETWDPRRDELVGGLYGVTIGGLFAGESMFHRRSDASKVALVALVRMMSEDELPAVTRGRLLDVQWLTPHLARLGAIEIPRSAYVERVRRAIRLPLPPALGSRRLVGEPGAAKER

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
24 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
32 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
33 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
34 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
35 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
36 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
37 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
38 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
39 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
43 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
53 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
54 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
55 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
56 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
59 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
60 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
61 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
65 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
66 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
67 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
73 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
74 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
83 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
84 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
87 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
88 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
102 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
112 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
113 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
114 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
115 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
121 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
122 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
123 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 0
Isolates 1.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.1
Nodule 0
Rhizoplane 6.55
Rhizosphere 77.38
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10050553 3300009147 Bacteria 5839
2 JGI25407J50210_10043092 3300003373 Bacteria 1153
3 Ga0070675_100088732 3300005354 Bacteria 2588
4 Ga0070662_100005800 3300005457 Bacteria 7916
5 Ga0070681_10219240 3300005458 Bacteria 1818
6 Ga0068867_100373277 3300005459 Bacteria 1196
7 Ga0070698_100004509 3300005471 Bacteria 15312
8 Ga0068857_100161899 3300005577 Bacteria 2031
9 Ga0081455_10037895 3300005937 Bacteria 4273
10 Ga0081538_10001412 3300005981 Bacteria 24701
11 Ga0081540_1008305 3300005983 Bacteria 7264
12 Ga0075365_10008312 3300006038 Bacteria 5883
13 Ga0075365_10038645 3300006038 Bacteria 3104
14 Ga0075363_100015079 3300006048 Bacteria 3791
15 Ga0075364_10055103 3300006051 Bacteria 2602
16 Ga0075364_10056388 3300006051 Bacteria 2572
17 Ga0075370_10274893 3300006353 Bacteria 1000
18 Ga0075428_100002144 3300006844 Bacteria 21311
19 Ga0075428_100157749 3300006844 Bacteria 2464
20 Ga0075428_100497928 3300006844 Bacteria 1304
21 Ga0075430_100002559 3300006846 Bacteria 15160
22 Ga0075430_100083228 3300006846 Bacteria 2680
23 Ga0075431_100033615 3300006847 Bacteria 5285
24 Ga0075431_100093682 3300006847 Bacteria 3100
25 Ga0075431_100099070 3300006847 Bacteria 3008
26 Ga0075429_100122350 3300006880 Bacteria 2275
27 Ga0075429_100230140 3300006880 Bacteria 1624
28 Ga0157369_10225520 3300013105 Bacteria 1960
29 Ga0163162_10095097 3300013306 Bacteria 3066
30 Ga0163163_10571176 3300014325 Bacteria 1194
31 Ga0157380_10119498 3300014326 Bacteria 2229
32 Ga0213876_10003272 3300021384 Bacteria 9300
33 Ga0207707_10160110 3300025912 Bacteria 1968
34 Ga0207660_10436562 3300025917 Bacteria 1058
35 Ga0207652_10304528 3300025921 Bacteria 1438
36 Ga0207650_10068051 3300025925 Bacteria 2674
37 Ga0207648_10276371 3300026089 Bacteria 1501
38 Ga0207674_10021159 3300026116 Bacteria 7011
39 Ga0265327_10116742 3300031251 Bacteria 1269
40 Ga0316575_10002021 3300031665 Bacteria 6738
41 Ga0316579_10064205 3300031691 Bacteria 1731
42 Ga0316576_10000990 3300031727 Bacteria 14606
43 Ga0316576_10106473 3300031727 Bacteria 2099
44 Ga0316576_10221157 3300031727 Bacteria 1424
45 Ga0316578_10003836 3300031728 Bacteria 6971
46 Ga0316578_10022009 3300031728 Bacteria 3547
47 Ga0316577_10007651 3300031733 Bacteria 5766
48 Ga0316577_10074833 3300031733 Bacteria 1891
49 Ga0307406_10578712 3300031901 Bacteria 923
50 Ga0307407_10431255 3300031903 Bacteria 952
51 Ga0307412_10186532 3300031911 Bacteria 1565
52 Ga0307409_100025673 3300031995 Bacteria 4138
53 Ga0307415_100420782 3300032126 Bacteria 1146
54 Ga0316585_10001482 3300032137 Bacteria 6217
55 Ga0316580_10009430 3300032139 Bacteria 2934
56 Ga0316574_0002248 3300035398 Bacteria 9610
57 Ga0316574_0081101 3300035398 Bacteria 2060
58 Ga0316582_0003253 3300036647 Bacteria 7920
59 Ga0316582_0003977 3300036647 Bacteria 7381
60 Ga0316584_0001536 3300036712 Bacteria 13951
61 Ga0316584_0012266 3300036712 Bacteria 6041
62 Ga0395899_0483403 3300037312 Bacteria 806
63 Ga0395900_0011855 3300037418 Bacteria 8915
64 Ga0395898_0083954 3300037466 Bacteria 3070
65 Ga0395901_0007967 3300038443 Bacteria 10692
66 Ga0436365_0850309 3300039437 Bacteria 17155
67 Ga0436365_1075961 3300039437 Bacteria 964
68 Ga0451797_1076776 3300041453 Bacteria 1142
69 Ga0451841_1048767 3300041498 Bacteria 900
70 Ga0451853_1127792 3300041512 Bacteria 871
71 Ga0439431_0022544 3300041997 Bacteria 1518
72 Ga0439442_023066 3300042002 Bacteria 1293
73 Ga0439448_0084450 3300042005 Bacteria 1069
74 Ga0439446_0031144 3300042156 Bacteria 1543
75 Ga0466971_0022045 3300044719 Bacteria 2835
76 Ga0466970_0011189 3300044765 Bacteria 4570
77 Ga0466960_0232200 3300044901 Bacteria 1019
78 Ga0466958_0014923 3300045836 Bacteria 4442
79 Ga0466958_0026623 3300045836 Bacteria 3419
80 Ga0466967_0092102 3300045976 Bacteria 2756
81 Ga0495603_0508178 3300046455 Bacteria 690
82 Ga0495653_0031382 3300046463 Bacteria 4223
83 Ga0495582_0168045 3300046473 Bacteria 1248
84 Ga0495664_0374191 3300046477 Bacteria 857
85 Ga0495618_0355553 3300046514 Bacteria 902
86 Ga0495628_0018836 3300046516 Bacteria 5713
87 Ga0495628_0024018 3300046516 Bacteria 4994
88 Ga0495630_0025120 3300046517 Bacteria 4404
89 Ga0495666_0025859 3300046526 Bacteria 2897
90 Ga0495640_0096713 3300046533 Bacteria 1942
91 Ga0495586_0043344 3300046535 Bacteria 2424
92 Ga0495667_0025618 3300046559 Bacteria 3974
93 Ga0495667_0069840 3300046559 Bacteria 2292
94 Ga0495635_0228529 3300046663 Bacteria 1257
95 Ga0495657_0058024 3300046675 Bacteria 2572
96 Ga0495658_0014190 3300046683 Bacteria 4065
97 Ga0495674_0042424 3300047319 Bacteria 4058
98 Ga0495680_0044862 3300047322 Bacteria 3493
99 Ga0495680_0122883 3300047322 Bacteria 1915
100 Ga0495675_0150747 3300047444 Bacteria 1437
101 Ga0495684_0040346 3300047471 Bacteria 3579
102 Ga0496103_0291869 3300048906 Bacteria 1049
103 Ga0496104_0055166 3300048907 Bacteria 3757
104 Ga0496105_0150866 3300048908 Bacteria 1910
105 Ga0496108_0221204 3300048911 Bacteria 1645
106 Ga0496109_0873719 3300048912 Bacteria 837
107 Ga0496110_0080856 3300048913 Bacteria 2896
108 Ga0496111_0034801 3300048914 Bacteria 3598
109 Ga0496114_0011713 3300048917 Bacteria 7013
110 Ga0496114_0142091 3300048917 Bacteria 2079
111 Ga0496114_0221724 3300048917 Bacteria 1660
112 Ga0501034_0000297 3300049571 Bacteria 88160
113 Ga0501034_0146399 3300049571 Bacteria 2339
114 Ga0501039_0052430 3300049575 Bacteria 3157
115 Ga0501048_0372599 3300049582 Bacteria 1019
116 Ga0501067_0040465 3300049583 Bacteria 2589
117 Ga0501068_0022932 3300049584 Bacteria 3655
118 Ga0501069_0000127 3300049585 Bacteria 33582
119 Ga0501070_0000777 3300049586 Bacteria 29040
120 Ga0501071_0024891 3300049587 Bacteria 4188
121 Ga0501071_0192961 3300049587 Bacteria 1528
122 Ga0501071_0429251 3300049587 Bacteria 1010
123 Ga0501072_0136365 3300049588 Bacteria 1956
124 Ga0501073_0036457 3300049589 Bacteria 3494
125 Ga0501074_0043662 3300049590 Bacteria 3245
126 Ga0501074_0107720 3300049590 Bacteria 1995
127 Ga0501074_0264455 3300049590 Bacteria 1223
128 Ga0501076_0095772 3300049592 Bacteria 2391
129 Ga0501079_0009528 3300049741 Bacteria 7364
130 Ga0501080_0050623 3300049742 Bacteria 3865
131 Ga0501080_0127085 3300049742 Bacteria 2361
132 Ga0501083_0003295 3300049744 Bacteria 11279
133 nmdc:mga03n38_13461_c1 3300050490 Bacteria 3109
134 nmdc:mga03n38_23218_c1 3300050490 Bacteria 2520
135 nmdc:mga03n38_45515_c1 3300050490 Bacteria 1932
136 nmdc:mga00v17_24938_c1 3300050491 Bacteria 3471
137 nmdc:mga00v17_46995_c1 3300050491 Bacteria 2613
138 nmdc:mga0yw44_31158_c1 3300050492 Bacteria 3098
139 nmdc:mga0yw44_335853_c1 3300050492 Bacteria 1016
140 nmdc:mga0yw44_428_c1 3300050492 Bacteria 14762
141 nmdc:mga0yw44_440122_c1 3300050492 Bacteria 883
142 nmdc:mga0yw44_47705_c1 3300050492 Bacteria 2580
143 nmdc:mga0yw44_50604_c1 3300050492 Bacteria 2513
144 nmdc:mga09592_180347_c1 3300050508 Unclassified 1827
145 nmdc:mga09592_4070_c1 3300050508 Bacteria 11806
146 nmdc:mga09592_52372_c1 3300050508 Bacteria 3445
147 nmdc:mga0qj67_165599_c1 3300050509 Bacteria 1795
148 nmdc:mga0qj67_17639_c1 3300050509 Bacteria 5430
149 nmdc:mga06r32_3644_c1 3300050510 Bacteria 13757
150 nmdc:mga06r32_84346_c1 3300050510 Bacteria 3096
151 nmdc:mga06r32_8927_c1 3300050510 Bacteria 9034
152 Ga0495601_0059132 3300053077 Bacteria 2430
153 Ga0495601_0306468 3300053077 Bacteria 1034
154 Ga0495612_0064188 3300053078 Bacteria 1524
155 Ga0495619_0006131 3300053085 Bacteria 7616
156 Ga0500644_0128150 3300053088 Bacteria 996
157 Ga0500568_0028579 3300053139 Bacteria 2324
158 Ga0500616_0000621 3300053153 Bacteria 43064
159 Ga0500616_0003952 3300053153 Bacteria 10860
160 Ga0500616_0007712 3300053153 Bacteria 6795
161 Ga0501084_0006863 3300054114 Bacteria 9374
162 Ga0501082_0106387 3300060353 Bacteria 2427
163 Ga0501082_0116766 3300060353 Bacteria 2311
164 Ga0466962_0009002 3300061719 Bacteria 4781
165 Ga0530510_0345847 3300061734 Bacteria 1117
166 2515853803 2515154155 Bacteria 7985436
167 2676476130 2675903058 Bacteria 6822861
168 2827633960 2827628540 Bacteria 6858585
169 Ga0114129_10050553
170 JGI25407J50210_10043092
171 Ga0070675_100088732
172 Ga0070662_100005800
173 Ga0070681_10219240
174 Ga0068867_100373277
175 Ga0070698_100004509
176 Ga0068857_100161899
177 Ga0081455_10037895
178 Ga0081538_10001412
179 Ga0081540_1008305
180 Ga0075365_10008312
181 Ga0075365_10038645
182 Ga0075363_100015079
183 Ga0075364_10055103
184 Ga0075364_10056388
185 Ga0075370_10274893
186 Ga0075428_100002144
187 Ga0075428_100157749
188 Ga0075428_100497928
189 Ga0075430_100002559
190 Ga0075430_100083228
191 Ga0075431_100033615
192 Ga0075431_100093682
193 Ga0075431_100099070
194 Ga0075429_100122350
195 Ga0075429_100230140
196 Ga0157369_10225520
197 Ga0163162_10095097
198 Ga0163163_10571176
199 Ga0157380_10119498
200 Ga0213876_10003272
201 Ga0207707_10160110
202 Ga0207660_10436562
203 Ga0207652_10304528
204 Ga0207650_10068051
205 Ga0207648_10276371
206 Ga0207674_10021159
207 Ga0265327_10116742
208 Ga0316575_10002021
209 Ga0316579_10064205
210 Ga0316576_10000990
211 Ga0316576_10106473
212 Ga0316576_10221157
213 Ga0316578_10003836
214 Ga0316578_10022009
215 Ga0316577_10007651
216 Ga0316577_10074833
217 Ga0307406_10578712
218 Ga0307407_10431255
219 Ga0307412_10186532
220 Ga0307409_100025673
221 Ga0307415_100420782
222 Ga0316585_10001482
223 Ga0316580_10009430
224 Ga0316574_0002248
225 Ga0316574_0081101
226 Ga0316582_0003253
227 Ga0316582_0003977
228 Ga0316584_0001536
229 Ga0316584_0012266
230 Ga0395899_0483403
231 Ga0395900_0011855
232 Ga0395898_0083954
233 Ga0395901_0007967
234 Ga0436365_0850309
235 Ga0436365_1075961
236 Ga0451797_1076776
237 Ga0451841_1048767
238 Ga0451853_1127792
239 Ga0439431_0022544
240 Ga0439442_023066
241 Ga0439448_0084450
242 Ga0439446_0031144
243 Ga0466971_0022045
244 Ga0466970_0011189
245 Ga0466960_0232200
246 Ga0466958_0014923
247 Ga0466958_0026623
248 Ga0466967_0092102
249 Ga0495603_0508178
250 Ga0495653_0031382
251 Ga0495582_0168045
252 Ga0495664_0374191
253 Ga0495618_0355553
254 Ga0495628_0018836
255 Ga0495628_0024018
256 Ga0495630_0025120
257 Ga0495666_0025859
258 Ga0495640_0096713
259 Ga0495586_0043344
260 Ga0495667_0025618
261 Ga0495667_0069840
262 Ga0495635_0228529
263 Ga0495657_0058024
264 Ga0495658_0014190
265 Ga0495674_0042424
266 Ga0495680_0044862
267 Ga0495680_0122883
268 Ga0495675_0150747
269 Ga0495684_0040346
270 Ga0496103_0291869
271 Ga0496104_0055166
272 Ga0496105_0150866
273 Ga0496108_0221204
274 Ga0496109_0873719
275 Ga0496110_0080856
276 Ga0496111_0034801
277 Ga0496114_0011713
278 Ga0496114_0142091
279 Ga0496114_0221724
280 Ga0501034_0000297
281 Ga0501034_0146399
282 Ga0501039_0052430
283 Ga0501048_0372599
284 Ga0501067_0040465
285 Ga0501068_0022932
286 Ga0501069_0000127
287 Ga0501070_0000777
288 Ga0501071_0024891
289 Ga0501071_0192961
290 Ga0501071_0429251
291 Ga0501072_0136365
292 Ga0501073_0036457
293 Ga0501074_0043662
294 Ga0501074_0107720
295 Ga0501074_0264455
296 Ga0501076_0095772
297 Ga0501079_0009528
298 Ga0501080_0050623
299 Ga0501080_0127085
300 Ga0501083_0003295
301 nmdc:mga03n38_13461_c1
302 nmdc:mga03n38_23218_c1
303 nmdc:mga03n38_45515_c1
304 nmdc:mga00v17_24938_c1
305 nmdc:mga00v17_46995_c1
306 nmdc:mga0yw44_31158_c1
307 nmdc:mga0yw44_335853_c1
308 nmdc:mga0yw44_428_c1
309 nmdc:mga0yw44_440122_c1
310 nmdc:mga0yw44_47705_c1
311 nmdc:mga0yw44_50604_c1
312 nmdc:mga09592_180347_c1
313 nmdc:mga09592_4070_c1
314 nmdc:mga09592_52372_c1
315 nmdc:mga0qj67_165599_c1
316 nmdc:mga0qj67_17639_c1
317 nmdc:mga06r32_3644_c1
318 nmdc:mga06r32_84346_c1
319 nmdc:mga06r32_8927_c1
320 Ga0495601_0059132
321 Ga0495601_0306468
322 Ga0495612_0064188
323 Ga0495619_0006131
324 Ga0500644_0128150
325 Ga0500568_0028579
326 Ga0500616_0000621
327 Ga0500616_0003952
328 Ga0500616_0007712
329 Ga0501084_0006863
330 Ga0501082_0106387
331 Ga0501082_0116766
332 Ga0466962_0009002
333 Ga0530510_0345847
334 2515853803
335 2676476130
336 2827633960

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03588

Leu_Phe_trans

Leucyl/phenylalanyl-tRNA protein transferase

62

237

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z3o-assembly1.cif.gz_A complex structure of lf-transferase and phenylalanine 0.8775 11 218
2z3n-assembly1.cif.gz_B complex structure of lf-transferase and peptide b 0.8515 3 218
2dps-assembly1.cif.gz_A structure of leucyl/phenylalanyl-trna-protein transferase 0.8503 3 218
2cxa-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8393 3 218
2z3l-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.839 1 218
ID Description Score Start End Superfamily
2z3kA02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain 0.8527 60 218 3.40.630.70
af_O96210_178_350_3.40.630.70 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain 0.8135 62 214 3.40.630.70
2dpsB01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain 0.8014 3 59 3.30.70.3550
af_P28916_100_246_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7946 115 136 3.30.420.10
2z3kA02 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal domain 0.7922 60 218 3.40.630.70
ID Description Score Start End GO Terms
AF-A0A6L8JTQ9-F1-model_v4 deleted 0.9473 1 120
AF-A0A6J6SLE7-F1-model_v4 Unannotated protein 0.9412 1 215 GO:0005737
GO:0008914
GO:0030163
AF-A0A7K3M442-F1-model_v4 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) 0.9346 1 218 GO:0005737
GO:0008914
GO:0030163
AF-A0A6J4HNG1-F1-model_v4 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) 0.9325 1 220 GO:0005737
GO:0008914
GO:0030163
AF-A0A6P0HSI5-F1-model_v4 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) 0.932 1 220 GO:0005737
GO:0008914
GO:0030163

Map