F251786

General Info

Members Datasets Scaffolds Average Seq Length
168 134 153 487

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10070916|Ga0065704_1007091610
Length 469
Sequence MEKKDYDAIVVGAGPNGLAAAITLQQAGLAVLLVEAKSTIGGGLRSKELTLPGFVHDVCSAIHPMALSSPFFSALPLKDHGLQFIQSPINAAHPFDDGTAAVLQHSIEDTARQLGEDAQSYKQLITPLVNDWPLIADDALGPLHFPKHPFAMARFGLKALTSATFLAKRFKTQKARGLWAGMAAHAIQPLTNTSALMIAGHRQGWPIPKGGAQSIANALASYFLSIGGRIEVDQYIRSLDQLPSSHTVLFDVTPKQLLQIAGHRFSSIYKWQLEKYRYGMGVFKIDWALDQPIPFTAPECREAGTVHLGSTLEEITLSEQQSSNGQHAEKPFVLLAQQSRFDTSRAPAGKQVAWAYCHVPNGSAKDMTGIIETQVERYAPGFRDTILSKHVMNTADMEAYNANYIGGDINGGIMDLAQLFTRPALRSSPYRTSAKGLYICSSSTPPGGGVHGMCGYHAAKRALKDVFGK

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
3 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
4 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
5 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
6 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
9 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
10 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
11 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
12 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
13 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
14 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
15 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
61 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
85 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
88 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
101 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
102 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
103 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
108 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
116 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
119 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
120 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
121 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
122 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
123 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
124 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
125 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
126 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
127 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
128 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
129 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
130 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
131 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
132 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
133 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
134 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.07
Metatranscriptomes 0
Isolates 8.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 0
Rhizoplane 0
Rhizosphere 72.62
Stem 0
Stem Tuber 0
Unclassified 14.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000024 3300002737 Bacteria 229507
2 rootH1_10049259 3300003316 Bacteria 11540
3 rootH2_10000343 3300003320 Bacteria 102217
4 rootL2_10046952 3300003322 Bacteria 10020
5 rootL2_10165865 3300003322 Bacteria 2256
6 rootH1_10001370 3300003323 Bacteria 113238
7 rootH1_10001738 3300003323 Bacteria 61468
8 rootH1_10008697 3300003323 Bacteria 8679
9 rootH1_10079973 3300003323 Unclassified 3128
10 rootH1_10206178 3300003323 Bacteria 7488
11 Ga0055531_10000127 3300003794 Bacteria 85904
12 Ga0065704_10070916 3300005289 Bacteria 14691
13 Ga0065704_10075215 3300005289 Bacteria 5727
14 Ga0070658_10000549 3300005327 Bacteria 32556
15 Ga0070670_100159045 3300005331 Bacteria 1957
16 Ga0068869_100004286 3300005334 Bacteria 8857
17 Ga0070666_10000071 3300005335 Bacteria 75539
18 Ga0070691_10034756 3300005341 Bacteria 2373
19 Ga0070659_100030328 3300005366 Bacteria 4185
20 Ga0070667_100018583 3300005367 Bacteria 5765
21 Ga0070663_100008490 3300005455 Bacteria 6321
22 Ga0070662_100000081 3300005457 Bacteria 53265
23 Ga0070672_100079650 3300005543 Unclassified 2623
24 Ga0070665_100000072 3300005548 Bacteria 198575
25 Ga0068855_100003714 3300005563 Bacteria 18661
26 Ga0068852_100002761 3300005616 Bacteria 12162
27 Ga0068859_100000029 3300005617 Bacteria 178422
28 Ga0068863_100001061 3300005841 Bacteria 27480
29 Ga0068863_100019997 3300005841 Bacteria 6403
30 Ga0068858_100010745 3300005842 Bacteria 8657
31 Ga0068860_100003419 3300005843 Bacteria 16321
32 Ga0068865_100066169 3300006881 Unclassified 2549
33 Ga0097620_100000029 3300006931 Bacteria 178422
34 Ga0105240_10000193 3300009093 Bacteria 124087
35 Ga0105240_10007604 3300009093 Bacteria 15696
36 Ga0105247_10006492 3300009101 Bacteria 7237
37 Ga0105243_10143213 3300009148 Unclassified 2042
38 Ga0105241_10000432 3300009174 Bacteria 31648
39 Ga0105241_10000514 3300009174 Bacteria 29151
40 Ga0105237_10001945 3300009545 Bacteria 26311
41 Ga0105237_10002076 3300009545 Bacteria 25338
42 Ga0105237_10004449 3300009545 Bacteria 16224
43 Ga0105249_10001545 3300009553 Bacteria 20197
44 Ga0105239_10000062 3300010375 Bacteria 153782
45 Ga0105239_10007004 3300010375 Bacteria 12974
46 Ga0105239_10019666 3300010375 Bacteria 7454
47 Ga0105246_10018569 3300011119 Bacteria 4434
48 Ga0105246_10030819 3300011119 Bacteria 3545
49 Ga0157373_10014987 3300013100 Bacteria 5671
50 Ga0157373_10033831 3300013100 Bacteria 3673
51 Ga0157371_10002720 3300013102 Bacteria 16654
52 Ga0157370_10001850 3300013104 Bacteria 26088
53 Ga0157370_10102983 3300013104 Bacteria 2672
54 Ga0157369_10003312 3300013105 Bacteria 19147
55 Ga0157374_10000135 3300013296 Bacteria 67340
56 Ga0157378_10001264 3300013297 Bacteria 22767
57 Ga0157378_10022908 3300013297 Bacteria 5498
58 Ga0163162_10000097 3300013306 Bacteria 79518
59 Ga0163162_10000245 3300013306 Bacteria 49190
60 Ga0157372_10000011 3300013307 Bacteria 277202
61 Ga0157372_10090236 3300013307 Bacteria 3484
62 Ga0157379_10019697 3300014968 Bacteria 5961
63 Ga0157376_10000710 3300014969 Bacteria 21549
64 Ga0182007_10003447 3300015262 Bacteria 7450
65 Ga0213872_10059597 3300021361 Bacteria 1727
66 Ga0209437_100017 3300025233 Bacteria 694471
67 Ga0209258_100029 3300025242 Bacteria 490648
68 Ga0209026_1000862 3300025250 Bacteria 15839
69 Ga0209148_1000089 3300025254 Bacteria 253548
70 Ga0209257_1000004 3300025304 Bacteria 1678347
71 Ga0207710_10005676 3300025900 Bacteria 5369
72 Ga0207680_10000016 3300025903 Bacteria 134657
73 Ga0207647_10000058 3300025904 Bacteria 84631
74 Ga0207705_10000480 3300025909 Bacteria 34282
75 Ga0207654_10009892 3300025911 Bacteria 4849
76 Ga0207695_10000013 3300025913 Bacteria 821265
77 Ga0207695_10014046 3300025913 Bacteria 9510
78 Ga0207695_10016050 3300025913 Bacteria 8786
79 Ga0207671_10000703 3300025914 Bacteria 43058
80 Ga0207671_10000778 3300025914 Bacteria 40392
81 Ga0207706_10000147 3300025933 Bacteria 76792
82 Ga0207689_10000339 3300025942 Bacteria 43619
83 Ga0207667_10010020 3300025949 Bacteria 11114
84 Ga0207667_10038725 3300025949 Bacteria 5087
85 Ga0207658_10011849 3300025986 Bacteria 5942
86 Ga0207703_10007821 3300026035 Bacteria 8455
87 Ga0207678_10040050 3300026067 Bacteria 4064
88 Ga0207641_10000244 3300026088 Bacteria 70430
89 Ga0207641_10012357 3300026088 Bacteria 7004
90 Ga0207698_10009109 3300026142 Bacteria 6308
91 Ga0268266_10000089 3300028379 Bacteria 198566
92 Ga0268264_10003704 3300028381 Bacteria 13125
93 Ga0307517_10022545 3300028786 Bacteria 7885
94 Ga0307515_10000432 3300028794 Bacteria 100348
95 Ga0307515_10000684 3300028794 Bacteria 78055
96 Ga0307515_10001312 3300028794 Bacteria 56474
97 Ga0265327_10000905 3300031251 Bacteria 43620
98 Ga0307513_10114225 3300031456 Bacteria 2686
99 Ga0307509_10070587 3300031507 Bacteria 3647
100 Ga0307408_100007854 3300031548 Bacteria 7052
101 Ga0307412_10079503 3300031911 Bacteria 2262
102 Ga0307414_10018524 3300032004 Bacteria 4290
103 Ga0307415_100011736 3300032126 Bacteria 5030
104 Ga0307507_10000010 3300033179 Bacteria 265208
105 Ga0395899_0000853 3300037312 Bacteria 29193
106 Ga0395899_0020231 3300037312 Bacteria 5050
107 Ga0395900_0000226 3300037418 Bacteria 88588
108 Ga0395898_0004590 3300037466 Bacteria 15073
109 Ga0395905_0000068 3300037471 Bacteria 177163
110 Ga0395901_0000136 3300038443 Bacteria 95382
111 Ga0436361_0319325 3300039447 Bacteria 15867
112 Ga0439448_0003534 3300042005 Bacteria 4336
113 Ga0439457_000279 3300042014 Bacteria 14060
114 Ga0466972_0000114 3300044658 Bacteria 68658
115 Ga0466972_0027500 3300044658 Bacteria 2813
116 Ga0466966_0016174 3300044684 Bacteria 4932
117 Ga0466961_0034104 3300044693 Bacteria 3268
118 Ga0466957_0000166 3300044842 Bacteria 29325
119 Ga0466957_0109072 3300044842 Bacteria 1754
120 Ga0466959_0062252 3300045049 Unclassified 2712
121 Ga0495631_0015751 3300046518 Bacteria 3616
122 Ga0495652_0164576 3300046529 Bacteria 1718
123 Ga0495633_0000014 3300046558 Bacteria 261742
124 Ga0495633_0000025 3300046558 Bacteria 218627
125 Ga0495668_0000003 3300046616 Bacteria 695023
126 Ga0495668_0002996 3300046616 Bacteria 13189
127 Ga0495625_0006731 3300046660 Bacteria 10179
128 Ga0495686_0000160 3300047472 Bacteria 128437
129 Ga0495686_0021866 3300047472 Bacteria 4239
130 Ga0496118_0084860 3300048921 Bacteria 2208
131 Ga0496122_0095041 3300048925 Bacteria 2015
132 Ga0496124_0016181 3300048927 Bacteria 7110
133 Ga0501300_000236 3300049523 Bacteria 8298
134 Ga0501047_0121688 3300049581 Bacteria 2491
135 Ga0501202_000736 3300049652 Bacteria 4893
136 Ga0501236_000520 3300049670 Bacteria 4306
137 Ga0501241_000075 3300049758 Bacteria 22582
138 Ga0501264_000882 3300049761 Bacteria 3839
139 Ga0500578_0000697 3300053086 Bacteria 40025
140 Ga0500644_0000149 3300053088 Bacteria 43929
141 Ga0500646_0003424 3300053090 Bacteria 4070
142 Ga0500583_0000077 3300053092 Bacteria 58479
143 Ga0500583_0001759 3300053092 Bacteria 6340
144 Ga0500562_000025 3300053108 Bacteria 105616
145 Ga0500608_000502 3300053122 Bacteria 14608
146 Ga0500658_0037681 3300053134 Bacteria 1924
147 Ga0500577_0005570 3300053142 Bacteria 3407
148 Ga0500590_023144 3300053148 Bacteria 3228
149 Ga0500616_0016423 3300053153 Bacteria 4214
150 Ga0500622_0000723 3300053156 Bacteria 28863
151 Ga0500622_0020310 3300053156 Unclassified 3527
152 Ga0500624_000658 3300053157 Bacteria 8964
153 Ga0500645_004912 3300053730 Bacteria 5030

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044842 Ga0466957_0000166 Ga0466957_0000166_1922_3286 454
2 3300042005 Ga0439448_0003534 Ga0439448_0003534_2918_4297 455
3 3300005289 Ga0065704_10070916 Ga0065704_1007091610 469
4 iso_pu_bacteria 2890737413 2890740924 470
5 iso_pu_bacteria 2896109856 2896114584 471
6 iso_pu_bacteria 2738541278 2738726732 472
7 iso_pu_bacteria 2896344016 2896344257 472
8 iso_pu_bacteria 2929239360 2929241835 472
9 3300046616 Ga0495668_0002996 Ga0495668_0002996_9297_10718 473
10 iso_pu_bacteria 2852627209 2852631339 473
11 iso_pu_bacteria 2919186247 2919189167 473
12 iso_pu_bacteria 2939664404 2939666678 473
13 3300009093 Ga0105240_10000193 Ga0105240_1000019320 474
14 3300009545 Ga0105237_10001945 Ga0105237_100019456 474
15 3300010375 Ga0105239_10007004 Ga0105239_1000700415 474
16 3300025913 Ga0207695_10000013 Ga0207695_10000013235 474
17 3300031251 Ga0265327_10000905 Ga0265327_1000090520 474
18 3300044658 Ga0466972_0027500 Ga0466972_0027500_1293_2717 474
19 3300049523 Ga0501300_000236 Ga0501300_000236_6235_7659 474
20 iso_pu_bacteria 2739367866 2740034569 474
21 iso_pu_bacteria 2919437846 2919440854 474
22 iso_pu_bacteria 2929154850 2929155234 474
23 iso_pu_bacteria 3003233435 3003234932 474
24 3300003323 rootH1_10079973 rootH1_100799731 475
25 3300048921 Ga0496118_0084860 Ga0496118_0084860_292_1719 475
26 3300048925 Ga0496122_0095041 Ga0496122_0095041_114_1541 475
27 3300048927 Ga0496124_0016181 Ga0496124_0016181_3964_5394 475
28 iso_pu_bacteria 2898713307 2898713784 475
29 3300003323 rootH1_10001370 rootH1_1000137053 476
30 3300003794 Ga0055531_10000127 Ga0055531_1000012736 476
31 3300025304 Ga0209257_1000004 Ga0209257_1000004435 476
32 3300031507 Ga0307509_10070587 Ga0307509_100705873 476
33 3300042014 Ga0439457_000279 Ga0439457_000279_5299_6741 476
34 3300044658 Ga0466972_0000114 Ga0466972_0000114_8948_10384 476
35 3300049758 Ga0501241_000075 Ga0501241_000075_10142_11572 476
36 3300053086 Ga0500578_0000697 Ga0500578_0000697_24500_25930 476
37 3300053092 Ga0500583_0000077 Ga0500583_0000077_29333_30769 476
38 3300053092 Ga0500583_0001759 Ga0500583_0001759_4603_6048 476
39 iso_pu_bacteria 2852623160 2852623217 476
40 iso_pu_bacteria 2884933994 2884937918 476
41 3300003323 rootH1_10001738 rootH1_1000173838 477
42 3300003323 rootH1_10008697 rootH1_100086978 477
43 3300005289 Ga0065704_10075215 Ga0065704_100752152 477
44 3300013104 Ga0157370_10001850 Ga0157370_1000185019 477
45 3300013104 Ga0157370_10102983 Ga0157370_101029832 477
46 3300025242 Ga0209258_100029 Ga0209258_100029216 477
47 3300025254 Ga0209148_1000089 Ga0209148_1000089124 477
48 3300025914 Ga0207671_10000703 Ga0207671_1000070314 477
49 3300031456 Ga0307513_10114225 Ga0307513_101142252 477
50 3300046558 Ga0495633_0000025 Ga0495633_0000025_170781_172214 477
51 3300053088 Ga0500644_0000149 Ga0500644_0000149_7481_8914 477
52 3300053090 Ga0500646_0003424 Ga0500646_0003424_397_1830 477
53 3300053134 Ga0500658_0037681 Ga0500658_0037681_246_1679 477
54 3300053142 Ga0500577_0005570 Ga0500577_0005570_185_1618 477
55 3300053148 Ga0500590_023144 Ga0500590_023144_983_2416 477
56 3300003322 rootL2_10046952 rootL2_100469522 478
57 3300003322 rootL2_10165865 rootL2_101658652 478
58 3300005335 Ga0070666_10000071 Ga0070666_1000007177 478
59 3300005341 Ga0070691_10034756 Ga0070691_100347562 478
60 3300005455 Ga0070663_100008490 Ga0070663_1000084904 478
61 3300006881 Ga0068865_100066169 Ga0068865_1000661692 478
62 3300009545 Ga0105237_10004449 Ga0105237_100044492 478
63 3300011119 Ga0105246_10030819 Ga0105246_100308193 478
64 3300013102 Ga0157371_10002720 Ga0157371_100027204 478
65 3300013105 Ga0157369_10003312 Ga0157369_1000331215 478
66 3300013307 Ga0157372_10000011 Ga0157372_10000011191 478
67 3300014969 Ga0157376_10000710 Ga0157376_1000071016 478
68 3300015262 Ga0182007_10003447 Ga0182007_100034471 478
69 3300025903 Ga0207680_10000016 Ga0207680_1000001641 478
70 3300026067 Ga0207678_10040050 Ga0207678_100400503 478
71 3300028794 Ga0307515_10000432 Ga0307515_1000043260 478
72 3300028794 Ga0307515_10000684 Ga0307515_1000068455 478
73 3300028794 Ga0307515_10001312 Ga0307515_100013123 478
74 3300032004 Ga0307414_10018524 Ga0307414_100185241 478
75 3300037312 Ga0395899_0000853 Ga0395899_0000853_27500_28939 478
76 3300044684 Ga0466966_0016174 Ga0466966_0016174_1253_2692 478
77 3300044693 Ga0466961_0034104 Ga0466961_0034104_602_2041 478
78 3300045049 Ga0466959_0062252 Ga0466959_0062252_984_2423 478
79 3300046529 Ga0495652_0164576 Ga0495652_0164576_166_1620 478
80 3300046660 Ga0495625_0006731 Ga0495625_0006731_862_2343 478
81 3300053108 Ga0500562_000025 Ga0500562_000025_78983_80431 478
82 3300053153 Ga0500616_0016423 Ga0500616_0016423_2094_3530 478
83 3300053156 Ga0500622_0000723 Ga0500622_0000723_13658_15094 478
84 3300053730 Ga0500645_004912 Ga0500645_004912_2684_4132 478
85 3300005331 Ga0070670_100159045 Ga0070670_1001590451 479
86 3300005367 Ga0070667_100018583 Ga0070667_1000185838 479
87 3300005841 Ga0068863_100019997 Ga0068863_1000199974 479
88 3300013297 Ga0157378_10001264 Ga0157378_100012647 479
89 3300013297 Ga0157378_10022908 Ga0157378_100229087 479
90 3300025986 Ga0207658_10011849 Ga0207658_100118498 479
91 3300026088 Ga0207641_10012357 Ga0207641_100123572 479
92 3300049581 Ga0501047_0121688 Ga0501047_0121688_301_1746 479
93 3300002737 JGI25162J39368_1000024 JGI25162J39368_100002473 480
94 3300003316 rootH1_10049259 rootH1_100492594 480
95 3300003320 rootH2_10000343 rootH2_1000034329 480
96 3300003323 rootH1_10206178 rootH1_102061784 480
97 3300005327 Ga0070658_10000549 Ga0070658_100005495 480
98 3300005334 Ga0068869_100004286 Ga0068869_1000042866 480
99 3300005366 Ga0070659_100030328 Ga0070659_1000303282 480
100 3300005457 Ga0070662_100000081 Ga0070662_10000008114 480
101 3300005543 Ga0070672_100079650 Ga0070672_1000796501 480
102 3300005548 Ga0070665_100000072 Ga0070665_100000072150 480
103 3300005563 Ga0068855_100003714 Ga0068855_10000371413 480
104 3300005616 Ga0068852_100002761 Ga0068852_1000027613 480
105 3300005617 Ga0068859_100000029 Ga0068859_10000002974 480
106 3300005841 Ga0068863_100001061 Ga0068863_10000106115 480
107 3300005842 Ga0068858_100010745 Ga0068858_1000107456 480
108 3300005843 Ga0068860_100003419 Ga0068860_10000341910 480
109 3300006931 Ga0097620_100000029 Ga0097620_10000002974 480
110 3300009093 Ga0105240_10007604 Ga0105240_1000760415 480
111 3300009101 Ga0105247_10006492 Ga0105247_100064925 480
112 3300009148 Ga0105243_10143213 Ga0105243_101432132 480
113 3300009174 Ga0105241_10000432 Ga0105241_100004323 480
114 3300009174 Ga0105241_10000514 Ga0105241_1000051415 480
115 3300009545 Ga0105237_10002076 Ga0105237_1000207618 480
116 3300009553 Ga0105249_10001545 Ga0105249_100015457 480
117 3300010375 Ga0105239_10000062 Ga0105239_1000006250 480
118 3300010375 Ga0105239_10019666 Ga0105239_100196665 480
119 3300011119 Ga0105246_10018569 Ga0105246_100185692 480
120 3300013100 Ga0157373_10014987 Ga0157373_100149872 480
121 3300013100 Ga0157373_10033831 Ga0157373_100338313 480
122 3300013296 Ga0157374_10000135 Ga0157374_1000013546 480
123 3300013306 Ga0163162_10000097 Ga0163162_1000009725 480
124 3300013306 Ga0163162_10000245 Ga0163162_1000024536 480
125 3300013307 Ga0157372_10090236 Ga0157372_100902362 480
126 3300014968 Ga0157379_10019697 Ga0157379_100196973 480
127 3300021361 Ga0213872_10059597 Ga0213872_100595971 480
128 3300025233 Ga0209437_100017 Ga0209437_10001773 480
129 3300025250 Ga0209026_1000862 Ga0209026_100086215 480
130 3300025900 Ga0207710_10005676 Ga0207710_100056761 480
131 3300025904 Ga0207647_10000058 Ga0207647_1000005825 480
132 3300025909 Ga0207705_10000480 Ga0207705_1000048022 480
133 3300025911 Ga0207654_10009892 Ga0207654_100098923 480
134 3300025913 Ga0207695_10014046 Ga0207695_100140463 480
135 3300025913 Ga0207695_10016050 Ga0207695_100160505 480
136 3300025914 Ga0207671_10000778 Ga0207671_1000077820 480
137 3300025933 Ga0207706_10000147 Ga0207706_1000014740 480
138 3300025942 Ga0207689_10000339 Ga0207689_1000033916 480
139 3300025949 Ga0207667_10010020 Ga0207667_100100202 480
140 3300025949 Ga0207667_10038725 Ga0207667_100387254 480
141 3300026035 Ga0207703_10007821 Ga0207703_100078216 480
142 3300026088 Ga0207641_10000244 Ga0207641_1000024421 480
143 3300026142 Ga0207698_10009109 Ga0207698_100091093 480
144 3300028379 Ga0268266_10000089 Ga0268266_10000089148 480
145 3300028381 Ga0268264_10003704 Ga0268264_100037048 480
146 3300028786 Ga0307517_10022545 Ga0307517_100225457 480
147 3300031548 Ga0307408_100007854 Ga0307408_1000078547 480
148 3300031911 Ga0307412_10079503 Ga0307412_100795032 480
149 3300032126 Ga0307415_100011736 Ga0307415_1000117363 480
150 3300033179 Ga0307507_10000010 Ga0307507_10000010116 480
151 3300037312 Ga0395899_0020231 Ga0395899_0020231_926_2380 480
152 3300037418 Ga0395900_0000226 Ga0395900_0000226_43188_44642 480
153 3300037466 Ga0395898_0004590 Ga0395898_0004590_6571_8025 480
154 3300037471 Ga0395905_0000068 Ga0395905_0000068_134326_135780 480
155 3300038443 Ga0395901_0000136 Ga0395901_0000136_65333_66787 480
156 3300039447 Ga0436361_0319325 Ga0436361_0319325_8757_10205 480
157 3300044842 Ga0466957_0109072 Ga0466957_0109072_271_1725 480
158 3300046518 Ga0495631_0015751 Ga0495631_0015751_214_1665 480
159 3300046558 Ga0495633_0000014 Ga0495633_0000014_67354_68802 480
160 3300046616 Ga0495668_0000003 Ga0495668_0000003_315213_316661 480
161 3300047472 Ga0495686_0000160 Ga0495686_0000160_12557_14005 480
162 3300047472 Ga0495686_0021866 Ga0495686_0021866_1303_2751 480
163 3300049652 Ga0501202_000736 Ga0501202_000736_2036_3484 480
164 3300049670 Ga0501236_000520 Ga0501236_000520_394_1842 480
165 3300049761 Ga0501264_000882 Ga0501264_000882_35_1483 480
166 3300053122 Ga0500608_000502 Ga0500608_000502_11887_13338 480
167 3300053156 Ga0500622_0020310 Ga0500622_0020310_1276_2772 480
168 3300053157 Ga0500624_000658 Ga0500624_000658_2902_4350 480

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

10

73

0.94

PF00890

FAD_binding_2

FAD binding domain

7

46

0.93

PF01946

Thi4

Thi4 family

1

52

0.93

PF12831

FAD_oxidored

FAD dependent oxidoreductase

7

57

0.91

PF01494

FAD_binding_3

FAD binding domain

5

50

0.89

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

16

259

0.6

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f8p-assembly1.cif.gz_B structure of sulfolobus solfataricus trxr-b3 0.9776 8 36
3f8r-assembly1.cif.gz_B crystal structure of sulfolobus solfataricus thioredoxin reductase b3 in complex with two nadp molecules 0.9746 8 36
6uzi-assembly2.cif.gz_C crystal structure of dihydrolipoyl dehydrogenase from elizabethkingia anophelis nuhp1 0.9741 8 43
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9692 9 40
4j0f-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9647 9 40
ID Description Score Start End Superfamily
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1 10 44 3.50.50.60
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9918 10 37 3.50.50.60
1naaA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9841 8 39 3.50.50.60
3lxdA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9783 9 42 3.50.50.60
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9774 10 47 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2W5Z618-F1-model_v4 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 0.9906 5 400 GO:0016491
AF-A0A3D4FZ12-F1-model_v4 FAD-dependent oxidoreductase 0.9861 3 342
AF-A0A3D2J306-F1-model_v4 FAD-dependent oxidoreductase 0.9856 8 371
AF-A0A2V7WSB5-F1-model_v4 FAD-dependent oxidoreductase 0.9854 8 388
AF-A0A164QN16-F1-model_v4 FAD-dependent oxidoreductase 0.9853 9 381

Feature Viewer

pLDDT pTM Quality
90.08 0.9 High
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Predicted Structure (AlphaFold2)

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