F249385
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 166 | 123 | 166 | 525 |
Family's Representative Sequence
| Representative Sequence | 3300053153|Ga0500616_0001583|Ga0500616_0001583_2512_4074 |
| Length | 520 |
| Sequence | MVGRFLGLLAALAIGLAGTAQAQTLRVVMHSDVKILDPIWTTAFIVRNHGYMIYDTLFALDANLEIQPQMVDKWKVSDDKLTWTFTLRDGLAFHDGAPVTSEDVIASLKRWAVRDGLGQILWDKMADAKVVDAKTFQLTLKQPTGIMLQSLAKPSGNPFIMPKRVAETDAAKQIEDYTGSGPFMFKKEEWKAGDKTVYVKNPNYKPRSEPASGLAGGKVVKVDRVEWLAMPDQQTAVNAILAGEIDIIEQPQHDLYKILKADKNVSMVNTNKWGNQYIFRFNQLHKPFDNPKVRQAMLYALNQKDFLEGVIGDASYYTVCKAMFICGGPYATTAGFADKYESNFPKAKELLKEGGYDGAPVVLLHSTDLYTLTNMAPIAKALMEKAGMRVDMQSMDWQTLVSRRARRDPPEKGGWNVLITSTAAADALDPLTYSFIGATCDKAWFGWPCDAEITRLRDAFADETDETKRKAIVEALQLRAAENPTHAFLGQYTSAMAVRKNITGSVTSPVPVFWNIEKKK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 4 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 5 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 13 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 17 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 18 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 19 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 20 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 21 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 22 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 23 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 24 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 25 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 26 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 27 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 28 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 29 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 30 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 31 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 32 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 33 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 34 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 35 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 36 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 37 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 39 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009988 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG | Metagenome | Rhizosphere |
| 49 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 54 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 78 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 82 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 83 | 3300035088 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 | Metagenome | Rhizosphere |
| 84 | 3300035242 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 | Metagenome | Rhizosphere |
| 85 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 86 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 87 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 88 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 89 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 90 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 91 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 92 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 93 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 94 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 95 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 97 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 98 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 99 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 100 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 101 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 102 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 103 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 106 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 107 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 108 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 109 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 110 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 111 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 112 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 118 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 119 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 120 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 121 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 122 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 123 | 3300053733 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 16.27 |
| Nodule | 0 |
| Rhizoplane | 4.22 |
| Rhizosphere | 77.11 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.41 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10009108 | 3300005327 | Bacteria | 7981 |
| 2 | Ga0070683_100029988 | 3300005329 | Bacteria | 4932 |
| 3 | Ga0070683_100077114 | 3300005329 | Bacteria | 3116 |
| 4 | Ga0070689_100052839 | 3300005340 | Bacteria | 3143 |
| 5 | Ga0070691_10002587 | 3300005341 | Bacteria | 8070 |
| 6 | Ga0070691_10015413 | 3300005341 | Bacteria | 3513 |
| 7 | Ga0070661_100022221 | 3300005344 | Bacteria | 4541 |
| 8 | Ga0070669_100091757 | 3300005353 | Bacteria | 2278 |
| 9 | Ga0070710_10059917 | 3300005437 | Bacteria | 2164 |
| 10 | Ga0070698_100002784 | 3300005471 | Bacteria | 19250 |
| 11 | Ga0070699_100094369 | 3300005518 | Bacteria | 2619 |
| 12 | Ga0070684_100154867 | 3300005535 | Bacteria | 2078 |
| 13 | Ga0070697_100034553 | 3300005536 | Bacteria | 4077 |
| 14 | Ga0068853_100196317 | 3300005539 | Bacteria | 1836 |
| 15 | Ga0070665_100012396 | 3300005548 | Bacteria | 8591 |
| 16 | Ga0068855_100017515 | 3300005563 | Bacteria | 8615 |
| 17 | Ga0070664_100152395 | 3300005564 | Bacteria | 2041 |
| 18 | Ga0068857_100019159 | 3300005577 | Bacteria | 6006 |
| 19 | Ga0068854_100068627 | 3300005578 | Bacteria | 2586 |
| 20 | Ga0068856_100005650 | 3300005614 | Bacteria | 12311 |
| 21 | Ga0068859_100033646 | 3300005617 | Bacteria | 5148 |
| 22 | Ga0068859_100086824 | 3300005617 | Bacteria | 3176 |
| 23 | Ga0068864_100090339 | 3300005618 | Bacteria | 2700 |
| 24 | Ga0068861_100122898 | 3300005719 | Bacteria | 2096 |
| 25 | Ga0068860_100010904 | 3300005843 | Bacteria | 8962 |
| 26 | Ga0068860_100026634 | 3300005843 | Bacteria | 5573 |
| 27 | Ga0068860_100071785 | 3300005843 | Bacteria | 3289 |
| 28 | Ga0081455_10000086 | 3300005937 | Bacteria | 101126 |
| 29 | Ga0081455_10000538 | 3300005937 | Bacteria | 49235 |
| 30 | Ga0081455_10000991 | 3300005937 | Bacteria | 36058 |
| 31 | Ga0081455_10005190 | 3300005937 | Bacteria | 14332 |
| 32 | Ga0081455_10016271 | 3300005937 | Bacteria | 7187 |
| 33 | Ga0081455_10146648 | 3300005937 | Bacteria | 1825 |
| 34 | Ga0081538_10082638 | 3300005981 | Bacteria | 1701 |
| 35 | Ga0081540_1000644 | 3300005983 | Bacteria | 33105 |
| 36 | Ga0081539_10001452 | 3300005985 | Bacteria | 40486 |
| 37 | Ga0081539_10001680 | 3300005985 | Bacteria | 35819 |
| 38 | Ga0081539_10004951 | 3300005985 | Bacteria | 14150 |
| 39 | Ga0075365_10047428 | 3300006038 | Bacteria | 2824 |
| 40 | Ga0075362_10015194 | 3300006177 | Bacteria | 3126 |
| 41 | Ga0075367_10017759 | 3300006178 | Bacteria | 3912 |
| 42 | Ga0075367_10104191 | 3300006178 | Bacteria | 1736 |
| 43 | Ga0075369_10000068 | 3300006186 | Bacteria | 27154 |
| 44 | Ga0075366_10001526 | 3300006195 | Bacteria | 11574 |
| 45 | Ga0075428_100001670 | 3300006844 | Bacteria | 23642 |
| 46 | Ga0075431_100000020 | 3300006847 | Bacteria | 82958 |
| 47 | Ga0075433_10075687 | 3300006852 | Bacteria | 2962 |
| 48 | Ga0075434_100007889 | 3300006871 | Bacteria | 9862 |
| 49 | Ga0075429_100013063 | 3300006880 | Bacteria | 7202 |
| 50 | Ga0075429_100102843 | 3300006880 | Bacteria | 2494 |
| 51 | Ga0097620_100033645 | 3300006931 | Bacteria | 5148 |
| 52 | Ga0097620_100086825 | 3300006931 | Bacteria | 3176 |
| 53 | Ga0099794_10028026 | 3300007265 | Bacteria | 2616 |
| 54 | Ga0105250_10017529 | 3300009092 | Bacteria | 2912 |
| 55 | Ga0105240_10008002 | 3300009093 | Bacteria | 15226 |
| 56 | Ga0111539_10006007 | 3300009094 | Bacteria | 15690 |
| 57 | Ga0111539_10008007 | 3300009094 | Bacteria | 13481 |
| 58 | Ga0111539_10009273 | 3300009094 | Bacteria | 12433 |
| 59 | Ga0105245_10017076 | 3300009098 | Bacteria | 6333 |
| 60 | Ga0114129_10000437 | 3300009147 | Bacteria | 49415 |
| 61 | Ga0114129_10091646 | 3300009147 | Bacteria | 4210 |
| 62 | Ga0114129_10185510 | 3300009147 | Bacteria | 2828 |
| 63 | Ga0105242_10111587 | 3300009176 | Bacteria | 2332 |
| 64 | Ga0105237_10163071 | 3300009545 | Bacteria | 2228 |
| 65 | Ga0105238_10084023 | 3300009551 | Bacteria | 3173 |
| 66 | Ga0105249_10102496 | 3300009553 | Bacteria | 2694 |
| 67 | Ga0105035_101251 | 3300009988 | Bacteria | 1729 |
| 68 | Ga0157373_10075813 | 3300013100 | Bacteria | 2373 |
| 69 | Ga0157373_10090827 | 3300013100 | Bacteria | 2151 |
| 70 | Ga0157370_10085197 | 3300013104 | Bacteria | 2968 |
| 71 | Ga0157378_10173102 | 3300013297 | Bacteria | 2026 |
| 72 | Ga0163163_10031093 | 3300014325 | Bacteria | 5150 |
| 73 | Ga0213875_10000116 | 3300021388 | Bacteria | 90170 |
| 74 | Ga0207426_1020293 | 3300025302 | Bacteria | 2311 |
| 75 | Ga0207426_1028493 | 3300025302 | Bacteria | 1851 |
| 76 | Ga0207696_1014054 | 3300025711 | Bacteria | 2759 |
| 77 | Ga0207692_10073108 | 3300025898 | Bacteria | 1813 |
| 78 | Ga0207699_10086405 | 3300025906 | Bacteria | 1959 |
| 79 | Ga0207684_10045764 | 3300025910 | Bacteria | 3711 |
| 80 | Ga0207707_10012201 | 3300025912 | Bacteria | 7471 |
| 81 | Ga0207657_10096103 | 3300025919 | Bacteria | 2465 |
| 82 | Ga0207646_10017612 | 3300025922 | Bacteria | 6676 |
| 83 | Ga0207659_10137699 | 3300025926 | Bacteria | 1892 |
| 84 | Ga0207664_10010306 | 3300025929 | Bacteria | 6602 |
| 85 | Ga0207664_10046882 | 3300025929 | Bacteria | 3393 |
| 86 | Ga0207706_10068460 | 3300025933 | Bacteria | 3123 |
| 87 | Ga0207691_10198105 | 3300025940 | Bacteria | 1749 |
| 88 | Ga0207689_10034126 | 3300025942 | Bacteria | 4226 |
| 89 | Ga0207661_10043577 | 3300025944 | Bacteria | 3542 |
| 90 | Ga0207679_10036809 | 3300025945 | Bacteria | 3474 |
| 91 | Ga0207679_10123476 | 3300025945 | Bacteria | 2065 |
| 92 | Ga0207712_10028448 | 3300025961 | Bacteria | 3739 |
| 93 | Ga0207668_10097410 | 3300025972 | Bacteria | 2176 |
| 94 | Ga0207639_10135726 | 3300026041 | Bacteria | 2043 |
| 95 | Ga0207708_10037609 | 3300026075 | Bacteria | 3687 |
| 96 | Ga0207676_10066919 | 3300026095 | Bacteria | 2868 |
| 97 | Ga0207674_10047266 | 3300026116 | Bacteria | 4413 |
| 98 | Ga0207675_100011777 | 3300026118 | Bacteria | 8175 |
| 99 | Ga0207683_10162278 | 3300026121 | Bacteria | 2021 |
| 100 | Ga0207428_10007731 | 3300027907 | Bacteria | 9779 |
| 101 | Ga0207428_10031585 | 3300027907 | Bacteria | 4366 |
| 102 | Ga0268266_10001831 | 3300028379 | Bacteria | 24030 |
| 103 | Ga0268266_10022725 | 3300028379 | Bacteria | 5339 |
| 104 | Ga0268266_10032045 | 3300028379 | Bacteria | 4465 |
| 105 | Ga0268266_10068291 | 3300028379 | Bacteria | 3077 |
| 106 | Ga0268265_10085674 | 3300028380 | Bacteria | 2501 |
| 107 | Ga0268264_10110063 | 3300028381 | Bacteria | 2411 |
| 108 | Ga0265334_10005981 | 3300028573 | Bacteria | 5292 |
| 109 | Ga0307410_10051750 | 3300031852 | Bacteria | 2770 |
| 110 | Ga0373940_0000518 | 3300035088 | Bacteria | 6064 |
| 111 | Ga0373962_0009133 | 3300035242 | Bacteria | 2450 |
| 112 | Ga0373931_0001774 | 3300035691 | Bacteria | 9370 |
| 113 | Ga0395899_0023289 | 3300037312 | Bacteria | 4693 |
| 114 | Ga0395899_0030147 | 3300037312 | Bacteria | 4081 |
| 115 | Ga0395900_0001926 | 3300037418 | Bacteria | 23535 |
| 116 | Ga0395898_0019247 | 3300037466 | Bacteria | 6950 |
| 117 | Ga0436364_0358130 | 3300037853 | Bacteria | 22925 |
| 118 | Ga0436364_1136031 | 3300037853 | Bacteria | 1657 |
| 119 | Ga0395901_0013024 | 3300038443 | Bacteria | 8439 |
| 120 | Ga0395901_0025925 | 3300038443 | Bacteria | 6019 |
| 121 | Ga0436365_0768693 | 3300039437 | Bacteria | 10216 |
| 122 | Ga0436360_1304637 | 3300039438 | Bacteria | 3209 |
| 123 | Ga0466963_0013555 | 3300044694 | Bacteria | 5006 |
| 124 | Ga0466967_0029048 | 3300045976 | Bacteria | 4623 |
| 125 | Ga0496101_0121622 | 3300048904 | Bacteria | 1974 |
| 126 | Ga0496104_0013709 | 3300048907 | Bacteria | 7310 |
| 127 | Ga0496105_0072180 | 3300048908 | Bacteria | 2853 |
| 128 | Ga0496109_0012097 | 3300048912 | Bacteria | 7439 |
| 129 | Ga0496110_0097539 | 3300048913 | Bacteria | 2634 |
| 130 | Ga0496111_0050726 | 3300048914 | Bacteria | 2994 |
| 131 | Ga0496115_0022998 | 3300048918 | Bacteria | 4834 |
| 132 | Ga0501034_0000459 | 3300049571 | Bacteria | 67365 |
| 133 | Ga0501034_0027272 | 3300049571 | Bacteria | 5811 |
| 134 | Ga0501043_0044798 | 3300049579 | Bacteria | 3479 |
| 135 | Ga0501046_0169284 | 3300049580 | Bacteria | 1640 |
| 136 | nmdc:mga03683_16871_c1 | 3300050489 | Bacteria | 2753 |
| 137 | nmdc:mga03683_2534_c1 | 3300050489 | Bacteria | 5695 |
| 138 | nmdc:mga0yw44_56529_c1 | 3300050492 | Bacteria | 2391 |
| 139 | nmdc:mga0yw44_62458_c1 | 3300050492 | Bacteria | 2288 |
| 140 | nmdc:mga0k408_56069_c1 | 3300050493 | Bacteria | 2286 |
| 141 | nmdc:mga07m45_117997_c1 | 3300050496 | Bacteria | 1532 |
| 142 | nmdc:mga07m45_56972_c1 | 3300050496 | Bacteria | 2209 |
| 143 | nmdc:mga05p37_1262_c1 | 3300050507 | Bacteria | 29338 |
| 144 | nmdc:mga05p37_237518_c1 | 3300050507 | Bacteria | 2193 |
| 145 | nmdc:mga09592_3845_c1 | 3300050508 | Bacteria | 12095 |
| 146 | nmdc:mga09592_75083_c1 | 3300050508 | Bacteria | 2874 |
| 147 | nmdc:mga0qj67_88005_c1 | 3300050509 | Bacteria | 2494 |
| 148 | nmdc:mga06r32_142734_c1 | 3300050510 | Bacteria | 2372 |
| 149 | nmdc:mga06r32_32_c1 | 3300050510 | Bacteria | 83882 |
| 150 | nmdc:mga08y16_1971_c1 | 3300050511 | Bacteria | 20923 |
| 151 | nmdc:mga0n895_2672_c1 | 3300050512 | Bacteria | 14067 |
| 152 | nmdc:mga0rr50_38985_c1 | 3300050513 | Bacteria | 3443 |
| 153 | nmdc:mga0a205_171391_c1 | 3300050515 | Bacteria | 2066 |
| 154 | nmdc:mga0a205_4215_c1 | 3300050515 | Bacteria | 12897 |
| 155 | nmdc:mga0sz30_1341_c1 | 3300050516 | Bacteria | 8774 |
| 156 | nmdc:mga0sz30_1915_c1 | 3300050516 | Bacteria | 7430 |
| 157 | Ga0500651_0031422 | 3300053093 | Bacteria | 3344 |
| 158 | Ga0500651_0037243 | 3300053093 | Bacteria | 3065 |
| 159 | Ga0500641_0000267 | 3300053096 | Bacteria | 19425 |
| 160 | Ga0500595_026972 | 3300053119 | Bacteria | 1973 |
| 161 | Ga0500604_0014262 | 3300053151 | Bacteria | 2163 |
| 162 | Ga0500616_0000385 | 3300053153 | Bacteria | 61815 |
| 163 | Ga0500616_0001583 | 3300053153 | Bacteria | 21251 |
| 164 | Ga0500616_0001687 | 3300053153 | Bacteria | 20336 |
| 165 | Ga0500552_000166 | 3300053733 | Bacteria | 5806 |
| 166 | Ga0500552_000345 | 3300053733 | Bacteria | 4258 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300050496 | nmdc:mga07m45_117997_c1 | nmdc:mga07m45_117997_c1_90_1502 | 469 |
| 2 | 3300050507 | nmdc:mga05p37_237518_c1 | nmdc:mga05p37_237518_c1_25_1434 | 469 |
| 3 | 3300049579 | Ga0501043_0044798 | Ga0501043_0044798_538_2124 | 505 |
| 4 | 3300049580 | Ga0501046_0169284 | Ga0501046_0169284_96_1622 | 505 |
| 5 | 3300049571 | Ga0501034_0027272 | Ga0501034_0027272_3227_4807 | 506 |
| 6 | 3300007265 | Ga0099794_10028026 | Ga0099794_100280262 | 508 |
| 7 | 3300005471 | Ga0070698_100002784 | Ga0070698_1000027846 | 509 |
| 8 | 3300025922 | Ga0207646_10017612 | Ga0207646_100176124 | 509 |
| 9 | 3300006178 | Ga0075367_10017759 | Ga0075367_100177595 | 511 |
| 10 | 3300031852 | Ga0307410_10051750 | Ga0307410_100517502 | 511 |
| 11 | 3300037853 | Ga0436364_1136031 | Ga0436364_1136031_83_1618 | 511 |
| 12 | 3300053093 | Ga0500651_0037243 | Ga0500651_0037243_1347_2921 | 511 |
| 13 | 3300005985 | Ga0081539_10001680 | Ga0081539_1000168034 | 512 |
| 14 | 3300025910 | Ga0207684_10045764 | Ga0207684_100457642 | 512 |
| 15 | 3300053733 | Ga0500552_000166 | Ga0500552_000166_2233_3837 | 515 |
| 16 | 3300053733 | Ga0500552_000345 | Ga0500552_000345_1427_3019 | 515 |
| 17 | 3300009988 | Ga0105035_101251 | Ga0105035_1012511 | 518 |
| 18 | 3300013297 | Ga0157378_10173102 | Ga0157378_101731022 | 518 |
| 19 | 3300025302 | Ga0207426_1020293 | Ga0207426_10202932 | 518 |
| 20 | 3300050489 | nmdc:mga03683_16871_c1 | nmdc:mga03683_16871_c1_781_2364 | 518 |
| 21 | 3300005437 | Ga0070710_10059917 | Ga0070710_100599172 | 519 |
| 22 | 3300005548 | Ga0070665_100012396 | Ga0070665_1000123963 | 519 |
| 23 | 3300013100 | Ga0157373_10075813 | Ga0157373_100758132 | 519 |
| 24 | 3300021388 | Ga0213875_10000116 | Ga0213875_100001162 | 519 |
| 25 | 3300025898 | Ga0207692_10073108 | Ga0207692_100731081 | 519 |
| 26 | 3300025906 | Ga0207699_10086405 | Ga0207699_100864052 | 519 |
| 27 | 3300025929 | Ga0207664_10010306 | Ga0207664_100103065 | 519 |
| 28 | 3300025929 | Ga0207664_10046882 | Ga0207664_100468821 | 519 |
| 29 | 3300028379 | Ga0268266_10001831 | Ga0268266_100018317 | 519 |
| 30 | 3300028379 | Ga0268266_10068291 | Ga0268266_100682912 | 519 |
| 31 | 3300028573 | Ga0265334_10005981 | Ga0265334_100059817 | 519 |
| 32 | 3300037853 | Ga0436364_0358130 | Ga0436364_0358130_567_2147 | 519 |
| 33 | 3300038443 | Ga0395901_0013024 | Ga0395901_0013024_562_2136 | 519 |
| 34 | 3300053153 | Ga0500616_0001583 | Ga0500616_0001583_2512_4074 | 519 |
| 35 | 3300005329 | Ga0070683_100029988 | Ga0070683_1000299884 | 520 |
| 36 | 3300005340 | Ga0070689_100052839 | Ga0070689_1000528392 | 520 |
| 37 | 3300005344 | Ga0070661_100022221 | Ga0070661_1000222213 | 520 |
| 38 | 3300005564 | Ga0070664_100152395 | Ga0070664_1001523952 | 520 |
| 39 | 3300005578 | Ga0068854_100068627 | Ga0068854_1000686272 | 520 |
| 40 | 3300005614 | Ga0068856_100005650 | Ga0068856_10000565010 | 520 |
| 41 | 3300005618 | Ga0068864_100090339 | Ga0068864_1000903392 | 520 |
| 42 | 3300005843 | Ga0068860_100010904 | Ga0068860_1000109044 | 520 |
| 43 | 3300005937 | Ga0081455_10005190 | Ga0081455_100051906 | 520 |
| 44 | 3300005981 | Ga0081538_10082638 | Ga0081538_100826381 | 520 |
| 45 | 3300005985 | Ga0081539_10001452 | Ga0081539_1000145217 | 520 |
| 46 | 3300005985 | Ga0081539_10004951 | Ga0081539_100049519 | 520 |
| 47 | 3300006844 | Ga0075428_100001670 | Ga0075428_10000167022 | 520 |
| 48 | 3300006847 | Ga0075431_100000020 | Ga0075431_10000002020 | 520 |
| 49 | 3300006880 | Ga0075429_100013063 | Ga0075429_1000130637 | 520 |
| 50 | 3300009094 | Ga0111539_10006007 | Ga0111539_1000600710 | 520 |
| 51 | 3300009147 | Ga0114129_10000437 | Ga0114129_1000043710 | 520 |
| 52 | 3300013100 | Ga0157373_10090827 | Ga0157373_100908272 | 520 |
| 53 | 3300025302 | Ga0207426_1028493 | Ga0207426_10284932 | 520 |
| 54 | 3300025919 | Ga0207657_10096103 | Ga0207657_100961032 | 520 |
| 55 | 3300025940 | Ga0207691_10198105 | Ga0207691_101981051 | 520 |
| 56 | 3300025945 | Ga0207679_10036809 | Ga0207679_100368094 | 520 |
| 57 | 3300025945 | Ga0207679_10123476 | Ga0207679_101234762 | 520 |
| 58 | 3300026041 | Ga0207639_10135726 | Ga0207639_101357262 | 520 |
| 59 | 3300026095 | Ga0207676_10066919 | Ga0207676_100669192 | 520 |
| 60 | 3300027907 | Ga0207428_10007731 | Ga0207428_100077314 | 520 |
| 61 | 3300028379 | Ga0268266_10022725 | Ga0268266_100227252 | 520 |
| 62 | 3300028379 | Ga0268266_10032045 | Ga0268266_100320453 | 520 |
| 63 | 3300037312 | Ga0395899_0023289 | Ga0395899_0023289_493_2073 | 520 |
| 64 | 3300037418 | Ga0395900_0001926 | Ga0395900_0001926_19286_20866 | 520 |
| 65 | 3300039437 | Ga0436365_0768693 | Ga0436365_0768693_6078_7649 | 520 |
| 66 | 3300044694 | Ga0466963_0013555 | Ga0466963_0013555_145_1722 | 520 |
| 67 | 3300045976 | Ga0466967_0029048 | Ga0466967_0029048_1217_2794 | 520 |
| 68 | 3300049571 | Ga0501034_0000459 | Ga0501034_0000459_42362_43942 | 520 |
| 69 | 3300050492 | nmdc:mga0yw44_62458_c1 | nmdc:mga0yw44_62458_c1_273_1853 | 520 |
| 70 | 3300050507 | nmdc:mga05p37_1262_c1 | nmdc:mga05p37_1262_c1_1615_3183 | 520 |
| 71 | 3300050508 | nmdc:mga09592_3845_c1 | nmdc:mga09592_3845_c1_4505_6073 | 520 |
| 72 | 3300050510 | nmdc:mga06r32_32_c1 | nmdc:mga06r32_32_c1_78009_79577 | 520 |
| 73 | 3300050511 | nmdc:mga08y16_1971_c1 | nmdc:mga08y16_1971_c1_15711_17279 | 520 |
| 74 | 3300053093 | Ga0500651_0031422 | Ga0500651_0031422_167_1747 | 520 |
| 75 | 3300053153 | Ga0500616_0001687 | Ga0500616_0001687_13260_14882 | 520 |
| 76 | 3300005327 | Ga0070658_10009108 | Ga0070658_100091081 | 521 |
| 77 | 3300005329 | Ga0070683_100077114 | Ga0070683_1000771142 | 521 |
| 78 | 3300005341 | Ga0070691_10002587 | Ga0070691_100025875 | 521 |
| 79 | 3300005341 | Ga0070691_10015413 | Ga0070691_100154133 | 521 |
| 80 | 3300005353 | Ga0070669_100091757 | Ga0070669_1000917572 | 521 |
| 81 | 3300005518 | Ga0070699_100094369 | Ga0070699_1000943692 | 521 |
| 82 | 3300005535 | Ga0070684_100154867 | Ga0070684_1001548671 | 521 |
| 83 | 3300005536 | Ga0070697_100034553 | Ga0070697_1000345533 | 521 |
| 84 | 3300005539 | Ga0068853_100196317 | Ga0068853_1001963172 | 521 |
| 85 | 3300005563 | Ga0068855_100017515 | Ga0068855_1000175159 | 521 |
| 86 | 3300005577 | Ga0068857_100019159 | Ga0068857_1000191595 | 521 |
| 87 | 3300005617 | Ga0068859_100033646 | Ga0068859_1000336463 | 521 |
| 88 | 3300005617 | Ga0068859_100086824 | Ga0068859_1000868242 | 521 |
| 89 | 3300005719 | Ga0068861_100122898 | Ga0068861_1001228982 | 521 |
| 90 | 3300005843 | Ga0068860_100026634 | Ga0068860_1000266342 | 521 |
| 91 | 3300005843 | Ga0068860_100071785 | Ga0068860_1000717853 | 521 |
| 92 | 3300005937 | Ga0081455_10000086 | Ga0081455_1000008669 | 521 |
| 93 | 3300005937 | Ga0081455_10000538 | Ga0081455_100005383 | 521 |
| 94 | 3300005937 | Ga0081455_10000991 | Ga0081455_1000099125 | 521 |
| 95 | 3300005937 | Ga0081455_10016271 | Ga0081455_100162716 | 521 |
| 96 | 3300005937 | Ga0081455_10146648 | Ga0081455_101466481 | 521 |
| 97 | 3300005983 | Ga0081540_1000644 | Ga0081540_100064429 | 521 |
| 98 | 3300006038 | Ga0075365_10047428 | Ga0075365_100474282 | 521 |
| 99 | 3300006177 | Ga0075362_10015194 | Ga0075362_100151942 | 521 |
| 100 | 3300006178 | Ga0075367_10104191 | Ga0075367_101041911 | 521 |
| 101 | 3300006186 | Ga0075369_10000068 | Ga0075369_1000006828 | 521 |
| 102 | 3300006195 | Ga0075366_10001526 | Ga0075366_100015266 | 521 |
| 103 | 3300006852 | Ga0075433_10075687 | Ga0075433_100756873 | 521 |
| 104 | 3300006871 | Ga0075434_100007889 | Ga0075434_1000078894 | 521 |
| 105 | 3300006880 | Ga0075429_100102843 | Ga0075429_1001028432 | 521 |
| 106 | 3300006931 | Ga0097620_100033645 | Ga0097620_1000336453 | 521 |
| 107 | 3300006931 | Ga0097620_100086825 | Ga0097620_1000868252 | 521 |
| 108 | 3300009092 | Ga0105250_10017529 | Ga0105250_100175292 | 521 |
| 109 | 3300009093 | Ga0105240_10008002 | Ga0105240_100080028 | 521 |
| 110 | 3300009094 | Ga0111539_10008007 | Ga0111539_100080076 | 521 |
| 111 | 3300009094 | Ga0111539_10009273 | Ga0111539_100092735 | 521 |
| 112 | 3300009098 | Ga0105245_10017076 | Ga0105245_100170763 | 521 |
| 113 | 3300009147 | Ga0114129_10091646 | Ga0114129_100916462 | 521 |
| 114 | 3300009147 | Ga0114129_10185510 | Ga0114129_101855102 | 521 |
| 115 | 3300009176 | Ga0105242_10111587 | Ga0105242_101115871 | 521 |
| 116 | 3300009545 | Ga0105237_10163071 | Ga0105237_101630712 | 521 |
| 117 | 3300009551 | Ga0105238_10084023 | Ga0105238_100840231 | 521 |
| 118 | 3300009553 | Ga0105249_10102496 | Ga0105249_101024962 | 521 |
| 119 | 3300013104 | Ga0157370_10085197 | Ga0157370_100851972 | 521 |
| 120 | 3300014325 | Ga0163163_10031093 | Ga0163163_100310931 | 521 |
| 121 | 3300025711 | Ga0207696_1014054 | Ga0207696_10140542 | 521 |
| 122 | 3300025912 | Ga0207707_10012201 | Ga0207707_100122012 | 521 |
| 123 | 3300025926 | Ga0207659_10137699 | Ga0207659_101376991 | 521 |
| 124 | 3300025933 | Ga0207706_10068460 | Ga0207706_100684601 | 521 |
| 125 | 3300025942 | Ga0207689_10034126 | Ga0207689_100341262 | 521 |
| 126 | 3300025944 | Ga0207661_10043577 | Ga0207661_100435771 | 521 |
| 127 | 3300025961 | Ga0207712_10028448 | Ga0207712_100284482 | 521 |
| 128 | 3300025972 | Ga0207668_10097410 | Ga0207668_100974101 | 521 |
| 129 | 3300026075 | Ga0207708_10037609 | Ga0207708_100376092 | 521 |
| 130 | 3300026116 | Ga0207674_10047266 | Ga0207674_100472664 | 521 |
| 131 | 3300026118 | Ga0207675_100011777 | Ga0207675_1000117771 | 521 |
| 132 | 3300026121 | Ga0207683_10162278 | Ga0207683_101622781 | 521 |
| 133 | 3300027907 | Ga0207428_10031585 | Ga0207428_100315853 | 521 |
| 134 | 3300028380 | Ga0268265_10085674 | Ga0268265_100856741 | 521 |
| 135 | 3300028381 | Ga0268264_10110063 | Ga0268264_101100632 | 521 |
| 136 | 3300035088 | Ga0373940_0000518 | Ga0373940_0000518_2158_3750 | 521 |
| 137 | 3300035242 | Ga0373962_0009133 | Ga0373962_0009133_737_2329 | 521 |
| 138 | 3300035691 | Ga0373931_0001774 | Ga0373931_0001774_4700_6292 | 521 |
| 139 | 3300037312 | Ga0395899_0030147 | Ga0395899_0030147_1498_3069 | 521 |
| 140 | 3300037466 | Ga0395898_0019247 | Ga0395898_0019247_2462_4033 | 521 |
| 141 | 3300038443 | Ga0395901_0025925 | Ga0395901_0025925_4242_5813 | 521 |
| 142 | 3300039438 | Ga0436360_1304637 | Ga0436360_1304637_171_1751 | 521 |
| 143 | 3300048904 | Ga0496101_0121622 | Ga0496101_0121622_313_1908 | 521 |
| 144 | 3300048907 | Ga0496104_0013709 | Ga0496104_0013709_5176_6771 | 521 |
| 145 | 3300048908 | Ga0496105_0072180 | Ga0496105_0072180_645_2240 | 521 |
| 146 | 3300048912 | Ga0496109_0012097 | Ga0496109_0012097_3364_4959 | 521 |
| 147 | 3300048913 | Ga0496110_0097539 | Ga0496110_0097539_40_1635 | 521 |
| 148 | 3300048914 | Ga0496111_0050726 | Ga0496111_0050726_54_1649 | 521 |
| 149 | 3300048918 | Ga0496115_0022998 | Ga0496115_0022998_551_2146 | 521 |
| 150 | 3300050489 | nmdc:mga03683_2534_c1 | nmdc:mga03683_2534_c1_2874_4505 | 521 |
| 151 | 3300050492 | nmdc:mga0yw44_56529_c1 | nmdc:mga0yw44_56529_c1_524_2116 | 521 |
| 152 | 3300050493 | nmdc:mga0k408_56069_c1 | nmdc:mga0k408_56069_c1_460_2037 | 521 |
| 153 | 3300050496 | nmdc:mga07m45_56972_c1 | nmdc:mga07m45_56972_c1_65_1696 | 521 |
| 154 | 3300050508 | nmdc:mga09592_75083_c1 | nmdc:mga09592_75083_c1_486_2069 | 521 |
| 155 | 3300050509 | nmdc:mga0qj67_88005_c1 | nmdc:mga0qj67_88005_c1_634_2214 | 521 |
| 156 | 3300050510 | nmdc:mga06r32_142734_c1 | nmdc:mga06r32_142734_c1_642_2222 | 521 |
| 157 | 3300050512 | nmdc:mga0n895_2672_c1 | nmdc:mga0n895_2672_c1_4874_6466 | 521 |
| 158 | 3300050513 | nmdc:mga0rr50_38985_c1 | nmdc:mga0rr50_38985_c1_712_2304 | 521 |
| 159 | 3300050515 | nmdc:mga0a205_171391_c1 | nmdc:mga0a205_171391_c1_121_1695 | 521 |
| 160 | 3300050515 | nmdc:mga0a205_4215_c1 | nmdc:mga0a205_4215_c1_858_2450 | 521 |
| 161 | 3300050516 | nmdc:mga0sz30_1341_c1 | nmdc:mga0sz30_1341_c1_3994_5625 | 521 |
| 162 | 3300050516 | nmdc:mga0sz30_1915_c1 | nmdc:mga0sz30_1915_c1_5348_6940 | 521 |
| 163 | 3300053096 | Ga0500641_0000267 | Ga0500641_0000267_4515_6098 | 521 |
| 164 | 3300053119 | Ga0500595_026972 | Ga0500595_026972_331_1911 | 521 |
| 165 | 3300053151 | Ga0500604_0014262 | Ga0500604_0014262_345_1934 | 521 |
| 166 | 3300053153 | Ga0500616_0000385 | Ga0500616_0000385_52479_54071 | 521 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7kz9-assembly2.cif.gz_B | crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa | 0.8662 | 25 | 520 |
| 7kz9-assembly2.cif.gz_B | crystal structure of pseudomonas sp. pdc86 substrate-binding protein aapf in complex with a signaling molecule heheaa | 0.8611 | 25 | 520 |
| 6hlx-assembly1.cif.gz_A | structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 | 0.8536 | 25 | 521 |
| 4xkr-assembly1.cif.gz_A | crystal structure of nika from staphylococcus aureus in complex with ni-(l-his)(2-methyl-thiazolidine dicarboxylate) (co-crystallization with ni(ii) and cddeltahis medium supernatant) | 0.853 | 25 | 519 |
| 5yyb-assembly2.cif.gz_B | crystal structure of sialic acid binding protein from haemophilus ducreyi with neu5gc | 0.8529 | 24 | 521 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4oeuB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9137 | 181 | 273 | 3.40.190.10 |
| 4zebB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9085 | 181 | 272 | 3.40.190.10 |
| 4qflB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9077 | 183 | 270 | 3.40.190.10 |
| 5f1qB01 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.8936 | 181 | 269 | 3.40.190.10 |
| 6i3gA03 | Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 | 0.889 | 278 | 491 | 3.10.105.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2W5KNU5-F1-model_v4 | deleted | 0.9833 | 18 | 521 |
|
| AF-A0A536UXJ9-F1-model_v4 | ABC transporter substrate-binding protein | 0.9832 | 212 | 521 |
GO:0015833
GO:1904680 |
| AF-A0A4Q4CMT8-F1-model_v4 | ABC transporter substrate-binding protein | 0.9776 | 18 | 360 |
GO:0015833
GO:1904680 |
| AF-A0A521QUM1-F1-model_v4 | ABC transporter substrate-binding protein | 0.9768 | 31 | 521 |
GO:0015833
GO:0030288 GO:0043190 GO:1904680 |
| AF-A0A848EA69-F1-model_v4 | ABC transporter substrate-binding protein | 0.9746 | 21 | 521 |
GO:0015833
GO:0030288 GO:0043190 GO:1904680 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar