F248747

General Info

Members Datasets Scaffolds Average Seq Length
166 107 165 566

Family's Representative Sequence

Representative Sequence 3300033180|Ga0307510_10000002|Ga0307510_10000002424
Length 598
Sequence MGCCRGPSGGAVSARASVVAGGARYVAFAAVIILFGVFLVWPVWTVVSTGLGLSTPGVRLASVGAYLAAVFQDQQFRMGVINSAVIAALVTVCCVVITVPLALLNRRYDFPGKNLFASLLLVPLVLPPFVGAIGIRFIFGAQGALTALCQHLGLVAHGTPVNWLADHSFGAVVVSEAFSLYPILFVNVLTALSFVDPSLEQAAANLGASTWRVFRSVTLPLMLPGVFAGASIVFIWSFSELGTPLMFDFYDVTPVQVYFRITEISNNPLPYALLIVTMVGCCLVYALGKLAVGWRNRMGWTKTPAALSTIELRGLASIGVAAPFVIVILLALLPHIGVILTSVSETGQWYQSVLPRVFTTAHYEHALTHELALPSIRNSLIFSGLSVVLDIAIGLALGILIVRSRLPFALKAVIDSLSMLPLAVPGLVLAFGYLAVSLQIKAWFPDWKWLLSVIDVQKNPTLLLVMAYTIRRLPYVVRSIVAGLEQTPEELELAARNIGASRSQVLLRITTPLLGANLVAGALMVFAFTMLEVSDSLILVQKQSYWPITRGIFELFQRLGDGPYIASALGAWAMLLLTLILVLVNSLLGKRVGALFRI

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
53 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
54 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
57 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
66 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
88 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
89 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
90 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
91 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
104 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 0.6
Rhizosphere 86.14
Stem 0
Stem Tuber 0
Unclassified 12.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10017530 3300003320 Bacteria 5025
2 rootH1_10039392 3300003323 Bacteria 17215
3 rootH1_10083417 3300003323 Bacteria 2750
4 Ga0070683_100014585 3300005329 Bacteria 6881
5 Ga0070683_100016262 3300005329 Bacteria 6558
6 Ga0070683_100047003 3300005329 Bacteria 3988
7 Ga0070671_100001886 3300005355 Bacteria 16027
8 Ga0070667_100002554 3300005367 Bacteria 15824
9 Ga0070667_100052212 3300005367 Bacteria 3449
10 Ga0070713_100004998 3300005436 Bacteria 9005
11 Ga0070713_100053579 3300005436 Unclassified 3343
12 Ga0068867_100001014 3300005459 Bacteria 19180
13 Ga0070684_100125065 3300005535 Bacteria 2316
14 Ga0070665_100004412 3300005548 Bacteria 14780
15 Ga0070665_100020601 3300005548 Bacteria 6626
16 Ga0070665_100044557 3300005548 Bacteria 4455
17 Ga0068857_100073885 3300005577 Bacteria 3038
18 Ga0068856_100001065 3300005614 Bacteria 29026
19 Ga0068856_100123186 3300005614 Bacteria 2595
20 Ga0068859_100001446 3300005617 Bacteria 24083
21 Ga0068863_100003715 3300005841 Bacteria 15096
22 Ga0068863_100026904 3300005841 Bacteria 5485
23 Ga0068858_100000923 3300005842 Bacteria 30501
24 Ga0068858_100015855 3300005842 Bacteria 7083
25 Ga0068860_100003837 3300005843 Bacteria 15454
26 Ga0070717_10000219 3300006028 Bacteria 39528
27 Ga0097621_100005765 3300006237 Bacteria 8742
28 Ga0068871_100049526 3300006358 Bacteria 3396
29 Ga0075430_100021733 3300006846 Bacteria 5453
30 Ga0075431_100019603 3300006847 Bacteria 6899
31 Ga0068865_100076943 3300006881 Bacteria 2383
32 Ga0097620_100001446 3300006931 Bacteria 24083
33 Ga0105240_10085824 3300009093 Bacteria 3856
34 Ga0105240_10124906 3300009093 Bacteria 3094
35 Ga0105245_10013023 3300009098 Bacteria 7247
36 Ga0105247_10001598 3300009101 Bacteria 16036
37 Ga0105248_10089763 3300009177 Unclassified 3460
38 Ga0105238_10026224 3300009551 Bacteria 5939
39 Ga0105238_10132685 3300009551 Bacteria 2469
40 Ga0105249_10009685 3300009553 Bacteria 8443
41 Ga0105239_10216908 3300010375 Bacteria 2145
42 Ga0163162_10058500 3300013306 Bacteria 3883
43 Ga0207710_10024579 3300025900 Bacteria 2596
44 Ga0207687_10008055 3300025927 Bacteria 6894
45 Ga0207700_10049381 3300025928 Unclassified 3129
46 Ga0207644_10010743 3300025931 Bacteria 6038
47 Ga0207689_10000928 3300025942 Bacteria 28114
48 Ga0207661_10027775 3300025944 Bacteria 4327
49 Ga0207661_10030919 3300025944 Bacteria 4129
50 Ga0207677_10003452 3300026023 Bacteria 8374
51 Ga0207677_10022091 3300026023 Bacteria 3903
52 Ga0207703_10002339 3300026035 Bacteria 16532
53 Ga0207639_10114390 3300026041 Bacteria 2205
54 Ga0207678_10075491 3300026067 Bacteria 2888
55 Ga0207702_10021893 3300026078 Bacteria 5294
56 Ga0207641_10003942 3300026088 Bacteria 12973
57 Ga0207648_10000814 3300026089 Bacteria 35290
58 Ga0207674_10001845 3300026116 Bacteria 27004
59 Ga0268266_10001100 3300028379 Bacteria 33872
60 Ga0268266_10006411 3300028379 Bacteria 10779
61 Ga0268264_10000415 3300028381 Bacteria 60291
62 Ga0268264_10077584 3300028381 Unclassified 2830
63 Ga0265337_1005044 3300028556 Bacteria 5338
64 Ga0265337_1009648 3300028556 Bacteria 3432
65 Ga0265319_1000043 3300028563 Bacteria 109696
66 Ga0265319_1001343 3300028563 Bacteria 14838
67 Ga0265319_1007394 3300028563 Bacteria 4945
68 Ga0265319_1007699 3300028563 Bacteria 4810
69 Ga0265319_1009367 3300028563 Bacteria 4178
70 Ga0265334_10001138 3300028573 Bacteria 12999
71 Ga0265318_10000120 3300028577 Bacteria 72409
72 Ga0265318_10001011 3300028577 Bacteria 17959
73 Ga0265318_10001887 3300028577 Bacteria 11759
74 Ga0265318_10009079 3300028577 Bacteria 4393
75 Ga0265323_10000101 3300028653 Bacteria 48976
76 Ga0265322_10003168 3300028654 Bacteria 4997
77 Ga0265336_10001683 3300028666 Bacteria 9758
78 Ga0265336_10018210 3300028666 Bacteria 2278
79 Ga0265338_10000329 3300028800 Bacteria 86337
80 Ga0265324_10005153 3300029957 Bacteria 5702
81 Ga0265324_10006490 3300029957 Bacteria 4868
82 Ga0265324_10014165 3300029957 Bacteria 2957
83 Ga0307511_10004557 3300030521 Bacteria 14132
84 Ga0265320_10000254 3300031240 Bacteria 43938
85 Ga0265320_10001154 3300031240 Bacteria 19416
86 Ga0265320_10001396 3300031240 Bacteria 17547
87 Ga0265320_10006378 3300031240 Bacteria 7439
88 Ga0265325_10015553 3300031241 Bacteria 4276
89 Ga0265331_10008379 3300031250 Bacteria 5884
90 Ga0265327_10000057 3300031251 Bacteria 242754
91 Ga0265327_10002648 3300031251 Bacteria 18430
92 Ga0265327_10004967 3300031251 Bacteria 11425
93 Ga0265327_10034245 3300031251 Bacteria 2821
94 Ga0265316_10000887 3300031344 Bacteria 32794
95 Ga0265316_10052326 3300031344 Bacteria 3204
96 Ga0307509_10000017 3300031507 Bacteria 265012
97 Ga0307408_100000017 3300031548 Bacteria 355890
98 Ga0265313_10000228 3300031595 Bacteria 60668
99 Ga0265313_10005386 3300031595 Bacteria 9441
100 Ga0265313_10007080 3300031595 Bacteria 7746
101 Ga0265313_10008602 3300031595 Bacteria 6752
102 Ga0307508_10000551 3300031616 Bacteria 44445
103 Ga0265314_10001071 3300031711 Bacteria 31765
104 Ga0265314_10001625 3300031711 Bacteria 24601
105 Ga0265314_10003529 3300031711 Bacteria 15102
106 Ga0265342_10020583 3300031712 Bacteria 4228
107 Ga0265342_10022049 3300031712 Bacteria 4056
108 Ga0265342_10036996 3300031712 Bacteria 2979
109 Ga0265342_10051260 3300031712 Bacteria 2463
110 Ga0307410_10000137 3300031852 Bacteria 26086
111 Ga0307409_100001046 3300031995 Bacteria 12990
112 Ga0307416_100000034 3300032002 Bacteria 155632
113 Ga0307510_10000002 3300033180 Bacteria 801565
114 Ga0373936_0003446 3300035113 Bacteria 5934
115 Ga0395905_0000015 3300037471 Bacteria 393880
116 Ga0395901_0153580 3300038443 Bacteria 2418
117 Ga0436365_0941525 3300039437 Bacteria 29495
118 Ga0451577_0000012 3300042876 Bacteria 575467
119 Ga0451577_0002153 3300042876 Bacteria 24122
120 Ga0451577_0057218 3300042876 Bacteria 3477
121 Ga0453683_0000496 3300044673 Bacteria 45073
122 Ga0453683_0031427 3300044673 Unclassified 3356
123 Ga0453684_0000045 3300044712 Bacteria 582917
124 Ga0453684_0015038 3300044712 Bacteria 12281
125 Ga0451576_0002664 3300045051 Bacteria 26006
126 Ga0451576_0005925 3300045051 Bacteria 15142
127 Ga0451576_0013921 3300045051 Bacteria 8981
128 Ga0495630_0003527 3300046517 Bacteria 10891
129 Ga0495674_0018212 3300047319 Bacteria 6539
130 Ga0496102_0072082 3300048905 Bacteria 3173
131 Ga0496116_0013122 3300048919 Bacteria 6710
132 Ga0496117_0000135 3300048920 Bacteria 160708
133 Ga0496118_0000098 3300048921 Bacteria 160610
134 Ga0496119_0024798 3300048922 Bacteria 4207
135 Ga0496120_0000543 3300048923 Bacteria 57596
136 Ga0496120_0023552 3300048923 Bacteria 3853
137 Ga0496121_0001196 3300048924 Bacteria 45454
138 Ga0496121_0035548 3300048924 Bacteria 4463
139 Ga0496125_0000653 3300048928 Bacteria 57890
140 Ga0496125_0010007 3300048928 Bacteria 9636
141 Ga0496125_0017254 3300048928 Bacteria 6895
142 Ga0496126_0005971 3300048929 Bacteria 13694
143 Ga0501031_0072910 3300049568 Bacteria 2235
144 Ga0501032_0000413 3300049569 Bacteria 35272
145 Ga0501032_0002883 3300049569 Bacteria 13367
146 Ga0501033_0001078 3300049570 Bacteria 24727
147 Ga0501033_0002849 3300049570 Bacteria 14487
148 Ga0501036_0001736 3300049572 Bacteria 16930
149 Ga0501037_0001302 3300049573 Bacteria 18358
150 Ga0501037_0124148 3300049573 Bacteria 1854
151 Ga0501038_0000450 3300049574 Bacteria 35843
152 Ga0501039_0049294 3300049575 Bacteria 3255
153 Ga0501042_0001391 3300049578 Bacteria 14191
154 Ga0501043_0083208 3300049579 Bacteria 2516
155 Ga0501046_0045403 3300049580 Bacteria 3491
156 Ga0501048_0001282 3300049582 Bacteria 19055
157 Ga0501068_0028673 3300049584 Bacteria 3294
158 Ga0501070_0070419 3300049586 Bacteria 2896
159 Ga0501035_0001487 3300049822 Bacteria 24008
160 Ga0501035_0001832 3300049822 Bacteria 21401
161 Ga0501035_0164089 3300049822 Bacteria 1922
162 Ga0501044_0003407 3300049823 Bacteria 17911
163 Ga0501044_0012409 3300049823 Bacteria 9226
164 Ga0501044_0014899 3300049823 Bacteria 8382
165 Ga0500568_0014299 3300053139 Bacteria 3588

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0153580 Ga0395901_0153580_997_2403 462
2 3300030521 Ga0307511_10004557 Ga0307511_100045572 529
3 3300005355 Ga0070671_100001886 Ga0070671_10000188611 532
4 3300005367 Ga0070667_100002554 Ga0070667_1000025543 532
5 3300005548 Ga0070665_100044557 Ga0070665_1000445573 532
6 3300005617 Ga0068859_100001446 Ga0068859_10000144616 532
7 3300005841 Ga0068863_100003715 Ga0068863_10000371515 532
8 3300005842 Ga0068858_100000923 Ga0068858_10000092316 532
9 3300006931 Ga0097620_100001446 Ga0097620_10000144616 532
10 3300009101 Ga0105247_10001598 Ga0105247_100015988 532
11 3300009177 Ga0105248_10089763 Ga0105248_100897632 532
12 3300009553 Ga0105249_10009685 Ga0105249_100096851 532
13 3300013306 Ga0163162_10058500 Ga0163162_100585002 532
14 3300025900 Ga0207710_10024579 Ga0207710_100245792 532
15 3300025931 Ga0207644_10010743 Ga0207644_100107433 532
16 3300026088 Ga0207641_10003942 Ga0207641_100039422 532
17 3300028381 Ga0268264_10077584 Ga0268264_100775841 532
18 3300042876 Ga0451577_0002153 Ga0451577_0002153_2749_4443 532
19 3300048924 Ga0496121_0001196 Ga0496121_0001196_30215_31987 532
20 3300048928 Ga0496125_0010007 Ga0496125_0010007_6258_8030 532
21 3300045051 Ga0451576_0002664 Ga0451576_0002664_597_2291 536
22 3300005577 Ga0068857_100073885 Ga0068857_1000738852 539
23 3300010375 Ga0105239_10216908 Ga0105239_102169082 539
24 3300026116 Ga0207674_10001845 Ga0207674_100018454 539
25 3300045051 Ga0451576_0005925 Ga0451576_0005925_10709_12403 541
26 3300005842 Ga0068858_100015855 Ga0068858_1000158553 542
27 3300026035 Ga0207703_10002339 Ga0207703_1000233912 542
28 3300048928 Ga0496125_0000653 Ga0496125_0000653_53023_54822 542
29 3300048928 Ga0496125_0017254 Ga0496125_0017254_3902_5665 542
30 3300026067 Ga0207678_10075491 Ga0207678_100754912 543
31 3300028563 Ga0265319_1001343 Ga0265319_10013433 544
32 3300031240 Ga0265320_10001396 Ga0265320_100013962 544
33 3300049580 Ga0501046_0045403 Ga0501046_0045403_1659_3353 544
34 3300031507 Ga0307509_10000017 Ga0307509_1000001763 545
35 3300006846 Ga0075430_100021733 Ga0075430_1000217333 548
36 3300006847 Ga0075431_100019603 Ga0075431_1000196034 548
37 3300035113 Ga0373936_0003446 Ga0373936_0003446_2969_4786 548
38 3300039437 Ga0436365_0941525 Ga0436365_0941525_9081_10781 550
39 3300031616 Ga0307508_10000551 Ga0307508_1000055139 553
40 3300047319 Ga0495674_0018212 Ga0495674_0018212_3178_4917 553
41 3300009093 Ga0105240_10124906 Ga0105240_101249063 554
42 3300005367 Ga0070667_100052212 Ga0070667_1000522122 555
43 iso_pu_bacteria 2786546940 2788434339 555
44 3300009551 Ga0105238_10026224 Ga0105238_100262246 556
45 3300046517 Ga0495630_0003527 Ga0495630_0003527_5422_7131 557
46 3300048922 Ga0496119_0024798 Ga0496119_0024798_1234_2997 558
47 3300003323 rootH1_10039392 rootH1_100393923 559
48 3300003323 rootH1_10083417 rootH1_100834171 559
49 3300005329 Ga0070683_100014585 Ga0070683_1000145855 559
50 3300005329 Ga0070683_100047003 Ga0070683_1000470032 559
51 3300005436 Ga0070713_100004998 Ga0070713_1000049981 559
52 3300005459 Ga0068867_100001014 Ga0068867_10000101412 559
53 3300005614 Ga0068856_100001065 Ga0068856_1000010655 559
54 3300006028 Ga0070717_10000219 Ga0070717_100002192 559
55 3300006237 Ga0097621_100005765 Ga0097621_1000057656 559
56 3300006358 Ga0068871_100049526 Ga0068871_1000495262 559
57 3300006881 Ga0068865_100076943 Ga0068865_1000769432 559
58 3300025942 Ga0207689_10000928 Ga0207689_1000092816 559
59 3300025944 Ga0207661_10027775 Ga0207661_100277752 559
60 3300025944 Ga0207661_10030919 Ga0207661_100309192 559
61 3300026023 Ga0207677_10003452 Ga0207677_100034526 559
62 3300026023 Ga0207677_10022091 Ga0207677_100220913 559
63 3300026078 Ga0207702_10021893 Ga0207702_100218934 559
64 3300026089 Ga0207648_10000814 Ga0207648_100008148 559
65 3300028556 Ga0265337_1005044 Ga0265337_10050442 559
66 3300028556 Ga0265337_1009648 Ga0265337_10096481 559
67 3300028563 Ga0265319_1000043 Ga0265319_100004310 559
68 3300028563 Ga0265319_1007394 Ga0265319_10073942 559
69 3300028563 Ga0265319_1007699 Ga0265319_10076993 559
70 3300028563 Ga0265319_1009367 Ga0265319_10093672 559
71 3300028573 Ga0265334_10001138 Ga0265334_1000113812 559
72 3300028577 Ga0265318_10000120 Ga0265318_1000012016 559
73 3300028577 Ga0265318_10001011 Ga0265318_1000101113 559
74 3300028577 Ga0265318_10001887 Ga0265318_100018874 559
75 3300028577 Ga0265318_10009079 Ga0265318_100090792 559
76 3300028653 Ga0265323_10000101 Ga0265323_1000010122 559
77 3300028654 Ga0265322_10003168 Ga0265322_100031682 559
78 3300028666 Ga0265336_10001683 Ga0265336_100016832 559
79 3300028800 Ga0265338_10000329 Ga0265338_1000032964 559
80 3300029957 Ga0265324_10005153 Ga0265324_100051535 559
81 3300029957 Ga0265324_10006490 Ga0265324_100064905 559
82 3300029957 Ga0265324_10014165 Ga0265324_100141652 559
83 3300031240 Ga0265320_10000254 Ga0265320_1000025424 559
84 3300031240 Ga0265320_10001154 Ga0265320_100011542 559
85 3300031240 Ga0265320_10006378 Ga0265320_100063783 559
86 3300031241 Ga0265325_10015553 Ga0265325_100155532 559
87 3300031250 Ga0265331_10008379 Ga0265331_100083793 559
88 3300031251 Ga0265327_10000057 Ga0265327_10000057198 559
89 3300031251 Ga0265327_10002648 Ga0265327_1000264816 559
90 3300031251 Ga0265327_10004967 Ga0265327_1000496710 559
91 3300031251 Ga0265327_10034245 Ga0265327_100342451 559
92 3300031344 Ga0265316_10000887 Ga0265316_1000088727 559
93 3300031344 Ga0265316_10052326 Ga0265316_100523262 559
94 3300031548 Ga0307408_100000017 Ga0307408_100000017123 559
95 3300031595 Ga0265313_10000228 Ga0265313_1000022813 559
96 3300031595 Ga0265313_10005386 Ga0265313_100053864 559
97 3300031595 Ga0265313_10007080 Ga0265313_100070802 559
98 3300031595 Ga0265313_10008602 Ga0265313_100086021 559
99 3300031711 Ga0265314_10001071 Ga0265314_1000107117 559
100 3300031711 Ga0265314_10001625 Ga0265314_1000162520 559
101 3300031711 Ga0265314_10003529 Ga0265314_1000352915 559
102 3300031712 Ga0265342_10020583 Ga0265342_100205833 559
103 3300031712 Ga0265342_10022049 Ga0265342_100220492 559
104 3300031712 Ga0265342_10036996 Ga0265342_100369963 559
105 3300031712 Ga0265342_10051260 Ga0265342_100512602 559
106 3300031852 Ga0307410_10000137 Ga0307410_1000013726 559
107 3300031995 Ga0307409_100001046 Ga0307409_1000010465 559
108 3300032002 Ga0307416_100000034 Ga0307416_100000034112 559
109 3300037471 Ga0395905_0000015 Ga0395905_0000015_271196_272890 559
110 3300042876 Ga0451577_0000012 Ga0451577_0000012_100999_102693 559
111 3300042876 Ga0451577_0057218 Ga0451577_0057218_627_2321 559
112 3300044673 Ga0453683_0000496 Ga0453683_0000496_18925_20619 559
113 3300044712 Ga0453684_0000045 Ga0453684_0000045_80349_82043 559
114 3300044712 Ga0453684_0015038 Ga0453684_0015038_7509_9251 559
115 3300049568 Ga0501031_0072910 Ga0501031_0072910_273_1967 559
116 3300049569 Ga0501032_0000413 Ga0501032_0000413_24000_25694 559
117 3300049569 Ga0501032_0002883 Ga0501032_0002883_7072_8766 559
118 3300049570 Ga0501033_0001078 Ga0501033_0001078_11129_12823 559
119 3300049570 Ga0501033_0002849 Ga0501033_0002849_3680_5374 559
120 3300049572 Ga0501036_0001736 Ga0501036_0001736_3683_5377 559
121 3300049573 Ga0501037_0001302 Ga0501037_0001302_5765_7459 559
122 3300049573 Ga0501037_0124148 Ga0501037_0124148_146_1840 559
123 3300049574 Ga0501038_0000450 Ga0501038_0000450_10626_12320 559
124 3300049575 Ga0501039_0049294 Ga0501039_0049294_1197_2891 559
125 3300049578 Ga0501042_0001391 Ga0501042_0001391_7165_8859 559
126 3300049579 Ga0501043_0083208 Ga0501043_0083208_71_1765 559
127 3300049582 Ga0501048_0001282 Ga0501048_0001282_9739_11433 559
128 3300049584 Ga0501068_0028673 Ga0501068_0028673_1080_2774 559
129 3300049586 Ga0501070_0070419 Ga0501070_0070419_766_2460 559
130 3300049822 Ga0501035_0001487 Ga0501035_0001487_13141_14835 559
131 3300049822 Ga0501035_0001832 Ga0501035_0001832_7103_8797 559
132 3300049822 Ga0501035_0164089 Ga0501035_0164089_19_1713 559
133 3300049823 Ga0501044_0003407 Ga0501044_0003407_7130_8824 559
134 3300049823 Ga0501044_0012409 Ga0501044_0012409_3853_5547 559
135 3300049823 Ga0501044_0014899 Ga0501044_0014899_4305_5999 559
136 3300053139 Ga0500568_0014299 Ga0500568_0014299_1417_3111 559
137 3300028666 Ga0265336_10018210 Ga0265336_100182102 560
138 3300044673 Ga0453683_0031427 Ga0453683_0031427_232_2016 560
139 3300045051 Ga0451576_0013921 Ga0451576_0013921_912_2696 560
140 3300009098 Ga0105245_10013023 Ga0105245_100130232 563
141 3300025927 Ga0207687_10008055 Ga0207687_100080552 563
142 3300005329 Ga0070683_100016262 Ga0070683_1000162623 566
143 3300005535 Ga0070684_100125065 Ga0070684_1001250652 566
144 3300005548 Ga0070665_100004412 Ga0070665_1000044121 566
145 3300005548 Ga0070665_100020601 Ga0070665_1000206013 566
146 3300009093 Ga0105240_10085824 Ga0105240_100858243 566
147 3300028379 Ga0268266_10001100 Ga0268266_1000110032 566
148 3300028379 Ga0268266_10006411 Ga0268266_100064116 566
149 3300048929 Ga0496126_0005971 Ga0496126_0005971_11249_12997 566
150 3300005436 Ga0070713_100053579 Ga0070713_1000535795 567
151 3300005614 Ga0068856_100123186 Ga0068856_1001231862 567
152 3300005841 Ga0068863_100026904 Ga0068863_1000269044 567
153 3300005843 Ga0068860_100003837 Ga0068860_10000383711 567
154 3300009551 Ga0105238_10132685 Ga0105238_101326852 567
155 3300025928 Ga0207700_10049381 Ga0207700_100493812 567
156 3300026041 Ga0207639_10114390 Ga0207639_101143902 567
157 3300028381 Ga0268264_10000415 Ga0268264_1000041545 567
158 3300048905 Ga0496102_0072082 Ga0496102_0072082_81_1844 567
159 3300048919 Ga0496116_0013122 Ga0496116_0013122_4403_6166 567
160 3300048920 Ga0496117_0000135 Ga0496117_0000135_131684_133447 567
161 3300048921 Ga0496118_0000098 Ga0496118_0000098_27170_28933 567
162 3300048923 Ga0496120_0000543 Ga0496120_0000543_19264_21009 567
163 3300048923 Ga0496120_0023552 Ga0496120_0023552_369_2132 567
164 3300048924 Ga0496121_0035548 Ga0496121_0035548_224_1987 567
165 3300033180 Ga0307510_10000002 Ga0307510_10000002424 568
166 3300003320 rootH2_10017530 rootH2_100175303 578

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

95

295

0.86

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

391

594

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.8132 359 562
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8114 4 261
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8027 4 261
3rlf-assembly1.cif.gz_F crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.8003 359 559
7cad-assembly1.cif.gz_B mycobacterium smegmatis sugabc complex 0.7877 289 578
ID Description Score Start End Superfamily
af_P0AFR9_7_261_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9123 292 564 1.10.3720.10
af_P0AFR7_53_289_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8943 43 267 1.10.3720.10
af_Q2G2A9_6_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.881 300 564 1.10.3720.10
af_P71745_27_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8784 15 268 1.10.3720.10
af_P0AFR9_7_261_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8749 292 564 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A0S7YHV7-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9233 1 578 GO:0005886
GO:0055085
AF-A0A0S7YHV7-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.9217 1 578 GO:0005886
GO:0055085
AF-A0A7C3AC89-F1-model_v4 Iron ABC transporter permease 0.9216 1 459 GO:0005886
GO:0055085
AF-A0A645EQV4-F1-model_v4 Putative 2-aminoethylphosphonate transport system permease protein PhnV 0.9143 359 571 GO:0005886
GO:0055085
AF-A0A3N5VM66-F1-model_v4 Iron ABC transporter permease 0.9141 11 238 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
85.58 0.85 High
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Predicted Structure (AlphaFold2)

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