F248282

General Info

Members Datasets Scaffolds Average Seq Length
166 90 332 741

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10051782|Ga0114129_100517824
Length 831
Sequence MTVLTDAVPLSPEACAAHGVDRRRPAGIRMGLRLVAAGLVHRVYFDRGGVPALEPFIRFEPPTTGVVRDAQGKALIELAREYRRVVTYDEVPLILRQAILAAEDKNFFSHSGIDYGALPRVVRKTAARSLGEWWKGDAGLRLLLPQGGSTLTQQLVRGYFLQDLTSRPDGDSLFRHGIGPPRLLAVALGAAATNKLLRKLEEVRLTLWLEEEMQHRYGSRERAKQEIFARYASFIYLGNGRYGFAAGSEYYFGKSLASYTEEDAGKAALLAAIGKSPRDYAPVPGDPRPLRRRNEILALMARNGSISEALAERCQAESVRVAARSALKTDAPAAIESVFDELNEHGGGRFGVEDLFQGRISVHSTVDGRVQTIVNEALENGLSLYDSRHPRWKGLIQGSVVVLRNGDAGILAEAGGRPVYQDRQARYSDYNRVTGSLRQPGSAMKPFVYLAAFRQGLDLDTTVPDEPIDVPLGARPGRKWIANYDNQFKGPIPVRQALAESRNAVAVWIAVDIGIENANQTARQLGIDTPLQPYISTALGASEVRLLELASAYRAMASGILVDPHVVERVTGPSGEVLYEARHAGRDVRSTGISSAELSLIQEGLRGVIRLPDGTAHALDSRTFPIPVMGKTGTTTDLRDALFVGSTYGEQGITVAVRIGFDDNHPLGEKETGGYTALPIFREIMLRIYLGQLAGPVPQFPREIEEGIDEYLATRALLDAEQVEPLQPPPALLDGVYVLPRVGQLVPVSGALPAGTSKVYGNSDLQRYVGETPPEAPDASASERQAATSWPFSGPGEGASEFCDDAQRCAALKSHLIAARRAGVRTDWFNR

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
51 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
71 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
74 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
75 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
76 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
77 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
83 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
88 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.6
Nodule 0
Rhizoplane 0
Rhizosphere 99.4
Stem 0
Stem Tuber 0
Unclassified 11.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10051782 3300009147 Bacteria 5763
2 JGI24751J29686_10002379 3300002459 Unclassified 3795
3 Ga0065707_10000938 3300005295 Bacteria 21180
4 Ga0065707_10001839 3300005295 Bacteria 5900
5 Ga0070683_100000137 3300005329 Bacteria 47423
6 Ga0070670_100038311 3300005331 Unclassified 4123
7 Ga0070675_100000467 3300005354 Bacteria 27614
8 Ga0070694_100012037 3300005444 Bacteria 5371
9 Ga0070708_100020378 3300005445 Bacteria 5591
10 Ga0070708_100053916 3300005445 Bacteria 3570
11 Ga0070681_10080997 3300005458 Bacteria 3202
12 Ga0070706_100025070 3300005467 Bacteria 5489
13 Ga0070707_100014433 3300005468 Bacteria 7404
14 Ga0070707_100020641 3300005468 Bacteria 6217
15 Ga0070698_100013664 3300005471 Bacteria 8597
16 Ga0070699_100000012 3300005518 Bacteria 246521
17 Ga0070684_100000377 3300005535 Bacteria 30844
18 Ga0070697_100001355 3300005536 Bacteria 18541
19 Ga0070697_100027566 3300005536 Bacteria 4545
20 Ga0070695_100011164 3300005545 Bacteria 5371
21 Ga0070665_100005106 3300005548 Bacteria 13616
22 Ga0070704_100025924 3300005549 Bacteria 3866
23 Ga0070704_100042792 3300005549 Bacteria 3135
24 Ga0070704_100057103 3300005549 Unclassified 2774
25 Ga0068859_100000001 3300005617 Bacteria 545224
26 Ga0068859_100017829 3300005617 Bacteria 7137
27 Ga0068861_100070092 3300005719 Unclassified 2714
28 Ga0068862_100024981 3300005844 Bacteria 5016
29 Ga0075363_100031597 3300006048 Bacteria 2746
30 Ga0075428_100006216 3300006844 Bacteria 13284
31 Ga0075428_100070583 3300006844 Bacteria 3818
32 Ga0075428_100073298 3300006844 Bacteria 3739
33 Ga0075430_100001456 3300006846 Bacteria 19225
34 Ga0075430_100040464 3300006846 Bacteria 3945
35 Ga0075430_100058759 3300006846 Unclassified 3233
36 Ga0075431_100000722 3300006847 Bacteria 28493
37 Ga0075431_100036219 3300006847 Bacteria 5082
38 Ga0075431_100091808 3300006847 Unclassified 3133
39 Ga0075433_10005792 3300006852 Bacteria 9728
40 Ga0075433_10014563 3300006852 Bacteria 6429
41 Ga0075433_10022558 3300006852 Bacteria 5285
42 Ga0075433_10029635 3300006852 Bacteria 4665
43 Ga0075434_100000802 3300006871 Bacteria 24877
44 Ga0075434_100005511 3300006871 Bacteria 11526
45 Ga0075434_100010024 3300006871 Bacteria 8869
46 Ga0075434_100026028 3300006871 Bacteria 5728
47 Ga0075434_100050525 3300006871 Bacteria 4131
48 Ga0075434_100091802 3300006871 Unclassified 3038
49 Ga0075434_100101740 3300006871 Unclassified 2880
50 Ga0075429_100008854 3300006880 Bacteria 8748
51 Ga0075429_100074229 3300006880 Bacteria 2963
52 Ga0075429_100076853 3300006880 Bacteria 2908
53 Ga0075436_100001598 3300006914 Bacteria 15482
54 Ga0075436_100001939 3300006914 Bacteria 14231
55 Ga0075436_100005001 3300006914 Bacteria 9107
56 Ga0097620_100000001 3300006931 Bacteria 545224
57 Ga0097620_100017829 3300006931 Bacteria 7137
58 Ga0075435_100006986 3300007076 Bacteria 8014
59 Ga0075435_100079251 3300007076 Unclassified 2695
60 Ga0111539_10026089 3300009094 Bacteria 7153
61 Ga0111539_10059976 3300009094 Bacteria 4510
62 Ga0111539_10070533 3300009094 Bacteria 4125
63 Ga0114129_10005827 3300009147 Bacteria 17453
64 Ga0114129_10014835 3300009147 Bacteria 11104
65 Ga0114129_10015931 3300009147 Bacteria 10690
66 Ga0114129_10040104 3300009147 Bacteria 6602
67 Ga0114129_10052910 3300009147 Bacteria 5697
68 Ga0114129_10068374 3300009147 Bacteria 4953
69 Ga0114129_10073197 3300009147 Bacteria 4774
70 Ga0114129_10111848 3300009147 Bacteria 3768
71 Ga0114129_10154603 3300009147 Bacteria 3138
72 Ga0114129_10163801 3300009147 Unclassified 3036
73 Ga0105242_10052555 3300009176 Bacteria 3325
74 Ga0157369_10000115 3300013105 Bacteria 112480
75 Ga0157380_10014078 3300014326 Bacteria 5846
76 Ga0157380_10045795 3300014326 Bacteria 3435
77 Ga0207684_10008510 3300025910 Bacteria 9127
78 Ga0207684_10023516 3300025910 Bacteria 5262
79 Ga0207707_10018778 3300025912 Bacteria 6030
80 Ga0207652_10052776 3300025921 Bacteria 3491
81 Ga0207650_10025135 3300025925 Unclassified 4241
82 Ga0207659_10000086 3300025926 Bacteria 55279
83 Ga0207706_10043220 3300025933 Bacteria 3994
84 Ga0207665_10000108 3300025939 Bacteria 54035
85 Ga0207661_10000105 3300025944 Bacteria 53174
86 Ga0207708_10026327 3300026075 Bacteria 4401
87 Ga0207675_100085846 3300026118 Unclassified 2954
88 Ga0268266_10000292 3300028379 Bacteria 81843
89 Ga0265338_10006925 3300028800 Bacteria 14264
90 Ga0265331_10013683 3300031250 Unclassified 4351
91 Ga0265316_10007647 3300031344 Bacteria 10141
92 Ga0373956_0001615 3300035119 Bacteria 9263
93 Ga0373957_0006032 3300035120 Bacteria 3795
94 Ga0373955_0008152 3300035172 Bacteria 4848
95 Ga0373931_0013649 3300035691 Bacteria 3960
96 Ga0373933_0000633 3300035724 Bacteria 21943
97 Ga0373937_0005575 3300036401 Bacteria 10801
98 Ga0373925_0001616 3300037068 Bacteria 19027
99 Ga0373925_0016792 3300037068 Bacteria 5300
100 Ga0395900_0035628 3300037418 Bacteria 5126
101 Ga0395901_0003271 3300038443 Bacteria 16313
102 Ga0451577_0002244 3300042876 Bacteria 23463
103 Ga0451577_0035124 3300042876 Bacteria 4516
104 Ga0453683_0003432 3300044673 Bacteria 11680
105 Ga0453684_0035228 3300044712 Bacteria 6923
106 Ga0453684_0054510 3300044712 Bacteria 5208
107 Ga0451576_0088375 3300045051 Bacteria 3223
108 Ga0495629_0000004 3300046459 Bacteria 433516
109 Ga0495651_0000074 3300046462 Bacteria 73436
110 Ga0495580_0001626 3300046472 Bacteria 19744
111 Ga0495608_0004180 3300046511 Bacteria 10353
112 Ga0495628_0054187 3300046516 Bacteria 3162
113 Ga0495666_0008822 3300046526 Bacteria 5050
114 Ga0495586_0000289 3300046535 Bacteria 32016
115 Ga0495587_0003451 3300046536 Bacteria 10541
116 Ga0495622_0002285 3300046557 Bacteria 9319
117 Ga0495667_0008338 3300046559 Bacteria 7029
118 Ga0495635_0000342 3300046663 Bacteria 29826
119 Ga0495623_0014801 3300046679 Bacteria 5044
120 Ga0495613_0000463 3300046689 Bacteria 34684
121 Ga0495600_0022305 3300046809 Bacteria 4064
122 Ga0495600_0057476 3300046809 Bacteria 2541
123 Ga0495604_0008412 3300047317 Bacteria 8152
124 Ga0495676_0072756 3300047321 Unclassified 2638
125 Ga0495680_0000184 3300047322 Bacteria 66329
126 Ga0495680_0001688 3300047322 Bacteria 23448
127 Ga0495684_0000203 3300047471 Bacteria 45837
128 Ga0495684_0002038 3300047471 Bacteria 16262
129 nmdc:mga05p37_11251_c1 3300050507 Bacteria 10643
130 nmdc:mga05p37_135842_c1 3300050507 Bacteria 3016
131 nmdc:mga05p37_15325_c1 3300050507 Bacteria 9208
132 nmdc:mga05p37_17526_c1 3300050507 Bacteria 8645
133 nmdc:mga05p37_4987_c1 3300050507 Bacteria 15557
134 nmdc:mga05p37_5063_c1 3300050507 Bacteria 15451
135 nmdc:mga05p37_72716_c1 3300050507 Bacteria 4231
136 nmdc:mga05p37_84685_c1 3300050507 Bacteria 3558
137 nmdc:mga09592_18739_c1 3300050508 Bacteria 5677
138 nmdc:mga09592_34625_c1 3300050508 Bacteria 4222
139 nmdc:mga09592_90309_c1 3300050508 Bacteria 2617
140 nmdc:mga0qj67_13703_c1 3300050509 Bacteria 6120
141 nmdc:mga0qj67_16305_c1 3300050509 Bacteria 5631
142 nmdc:mga0qj67_40416_c1 3300050509 Bacteria 3666
143 nmdc:mga06r32_21329_c1 3300050510 Bacteria 5980
144 nmdc:mga06r32_27599_c1 3300050510 Bacteria 5306
145 nmdc:mga06r32_28475_c1 3300050510 Bacteria 5228
146 nmdc:mga08y16_60396_c1 3300050511 Bacteria 3960
147 nmdc:mga08y16_6672_c1 3300050511 Bacteria 12106
148 nmdc:mga08y16_68872_c1 3300050511 Bacteria 3689
149 nmdc:mga08y16_75094_c1 3300050511 Bacteria 3524
150 nmdc:mga0n895_12032_c1 3300050512 Bacteria 7746
151 nmdc:mga0n895_120738_c1 3300050512 Bacteria 2642
152 nmdc:mga0n895_57310_c1 3300050512 Bacteria 3840
153 nmdc:mga0n895_68952_c1 3300050512 Unclassified 3503
154 nmdc:mga0n895_84578_c1 3300050512 Bacteria 3166
155 nmdc:mga0rr50_27441_c1 3300050513 Bacteria 3796
156 nmdc:mga0rr50_30601_c1 3300050513 Unclassified 3813
157 nmdc:mga0rr50_60378_c1 3300050513 Unclassified 2851
158 nmdc:mga08x19_1242_c1 3300050514 Bacteria 15807
159 nmdc:mga08x19_60888_c1 3300050514 Unclassified 2446
160 nmdc:mga0a205_10015_c1 3300050515 Bacteria 8697
161 nmdc:mga0a205_26223_c1 3300050515 Bacteria 5555
162 nmdc:mga0a205_34226_c1 3300050515 Bacteria 4875
163 nmdc:mga0a205_55500_c1 3300050515 Bacteria 3826
164 nmdc:mga0a205_6330_c1 3300050515 Bacteria 10688
165 nmdc:mga0a205_64899_c1 3300050515 Unclassified 3526
166 Ga0495619_0020093 3300053085 Bacteria 4250
167 Ga0114129_10051782
168 JGI24751J29686_10002379
169 Ga0065707_10000938
170 Ga0065707_10001839
171 Ga0070683_100000137
172 Ga0070670_100038311
173 Ga0070675_100000467
174 Ga0070694_100012037
175 Ga0070708_100020378
176 Ga0070708_100053916
177 Ga0070681_10080997
178 Ga0070706_100025070
179 Ga0070707_100014433
180 Ga0070707_100020641
181 Ga0070698_100013664
182 Ga0070699_100000012
183 Ga0070684_100000377
184 Ga0070697_100001355
185 Ga0070697_100027566
186 Ga0070695_100011164
187 Ga0070665_100005106
188 Ga0070704_100025924
189 Ga0070704_100042792
190 Ga0070704_100057103
191 Ga0068859_100000001
192 Ga0068859_100017829
193 Ga0068861_100070092
194 Ga0068862_100024981
195 Ga0075363_100031597
196 Ga0075428_100006216
197 Ga0075428_100070583
198 Ga0075428_100073298
199 Ga0075430_100001456
200 Ga0075430_100040464
201 Ga0075430_100058759
202 Ga0075431_100000722
203 Ga0075431_100036219
204 Ga0075431_100091808
205 Ga0075433_10005792
206 Ga0075433_10014563
207 Ga0075433_10022558
208 Ga0075433_10029635
209 Ga0075434_100000802
210 Ga0075434_100005511
211 Ga0075434_100010024
212 Ga0075434_100026028
213 Ga0075434_100050525
214 Ga0075434_100091802
215 Ga0075434_100101740
216 Ga0075429_100008854
217 Ga0075429_100074229
218 Ga0075429_100076853
219 Ga0075436_100001598
220 Ga0075436_100001939
221 Ga0075436_100005001
222 Ga0097620_100000001
223 Ga0097620_100017829
224 Ga0075435_100006986
225 Ga0075435_100079251
226 Ga0111539_10026089
227 Ga0111539_10059976
228 Ga0111539_10070533
229 Ga0114129_10005827
230 Ga0114129_10014835
231 Ga0114129_10015931
232 Ga0114129_10040104
233 Ga0114129_10052910
234 Ga0114129_10068374
235 Ga0114129_10073197
236 Ga0114129_10111848
237 Ga0114129_10154603
238 Ga0114129_10163801
239 Ga0105242_10052555
240 Ga0157369_10000115
241 Ga0157380_10014078
242 Ga0157380_10045795
243 Ga0207684_10008510
244 Ga0207684_10023516
245 Ga0207707_10018778
246 Ga0207652_10052776
247 Ga0207650_10025135
248 Ga0207659_10000086
249 Ga0207706_10043220
250 Ga0207665_10000108
251 Ga0207661_10000105
252 Ga0207708_10026327
253 Ga0207675_100085846
254 Ga0268266_10000292
255 Ga0265338_10006925
256 Ga0265331_10013683
257 Ga0265316_10007647
258 Ga0373956_0001615
259 Ga0373957_0006032
260 Ga0373955_0008152
261 Ga0373931_0013649
262 Ga0373933_0000633
263 Ga0373937_0005575
264 Ga0373925_0001616
265 Ga0373925_0016792
266 Ga0395900_0035628
267 Ga0395901_0003271
268 Ga0451577_0002244
269 Ga0451577_0035124
270 Ga0453683_0003432
271 Ga0453684_0035228
272 Ga0453684_0054510
273 Ga0451576_0088375
274 Ga0495629_0000004
275 Ga0495651_0000074
276 Ga0495580_0001626
277 Ga0495608_0004180
278 Ga0495628_0054187
279 Ga0495666_0008822
280 Ga0495586_0000289
281 Ga0495587_0003451
282 Ga0495622_0002285
283 Ga0495667_0008338
284 Ga0495635_0000342
285 Ga0495623_0014801
286 Ga0495613_0000463
287 Ga0495600_0022305
288 Ga0495600_0057476
289 Ga0495604_0008412
290 Ga0495676_0072756
291 Ga0495680_0000184
292 Ga0495680_0001688
293 Ga0495684_0000203
294 Ga0495684_0002038
295 nmdc:mga05p37_11251_c1
296 nmdc:mga05p37_135842_c1
297 nmdc:mga05p37_15325_c1
298 nmdc:mga05p37_17526_c1
299 nmdc:mga05p37_4987_c1
300 nmdc:mga05p37_5063_c1
301 nmdc:mga05p37_72716_c1
302 nmdc:mga05p37_84685_c1
303 nmdc:mga09592_18739_c1
304 nmdc:mga09592_34625_c1
305 nmdc:mga09592_90309_c1
306 nmdc:mga0qj67_13703_c1
307 nmdc:mga0qj67_16305_c1
308 nmdc:mga0qj67_40416_c1
309 nmdc:mga06r32_21329_c1
310 nmdc:mga06r32_27599_c1
311 nmdc:mga06r32_28475_c1
312 nmdc:mga08y16_60396_c1
313 nmdc:mga08y16_6672_c1
314 nmdc:mga08y16_68872_c1
315 nmdc:mga08y16_75094_c1
316 nmdc:mga0n895_12032_c1
317 nmdc:mga0n895_120738_c1
318 nmdc:mga0n895_57310_c1
319 nmdc:mga0n895_68952_c1
320 nmdc:mga0n895_84578_c1
321 nmdc:mga0rr50_27441_c1
322 nmdc:mga0rr50_30601_c1
323 nmdc:mga0rr50_60378_c1
324 nmdc:mga08x19_1242_c1
325 nmdc:mga08x19_60888_c1
326 nmdc:mga0a205_10015_c1
327 nmdc:mga0a205_26223_c1
328 nmdc:mga0a205_34226_c1
329 nmdc:mga0a205_55500_c1
330 nmdc:mga0a205_6330_c1
331 nmdc:mga0a205_64899_c1
332 Ga0495619_0020093

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

398

686

0.87

PF00912

Transgly

Transglycosylase

71

301

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.8382 87 321
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.8293 82 321
5crf-assembly4.cif.gz_D structure of the penicillin-binding protein pona1 from mycobacterium tuberculosis 0.8258 337 703
7u4h-assembly1.cif.gz_A crystal structure of penicillin-binding protein 1a (pbp1a) from chlamydia trachomatis 0.8256 400 688
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.8249 87 321
ID Description Score Start End Superfamily
5hldA03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8912 338 703 3.40.710.10
2olvA02 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8715 87 326 1.10.3810.10
4oonA02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8632 371 703 3.40.710.10
3ue1A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8604 339 703 3.40.710.10
3zg9B02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8359 327 693 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A383EL57-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9428 401 561 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A2V9YA38-F1-model_v4 Penicillin-binding protein 0.9241 400 703 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A7C7BYA4-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9235 429 704 GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0016020
GO:0030288
GO:0071555
AF-A0A257VVG3-F1-model_v4 Penicillin-binding protein 0.9207 401 521 GO:0005886
GO:0008360
GO:0008658
GO:0008955
GO:0009252
GO:0030288
GO:0071555
AF-A0A382Y4B9-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9181 426 690 GO:0008658
GO:0008955
GO:0009252
GO:0030288

Map