F246658

General Info

Members Datasets Scaffolds Average Seq Length
165 120 330 357

Family's Representative Sequence

Representative Sequence 3300037471|Ga0395905_0135473|Ga0395905_0135473_940_2178
Length 412
Sequence VFLHALPLMVNATQQNRAKLRFGLIGCGGVGPTHAGALLRIEDAELVAVADLIPERASELAAKLGLSKVYTSDEELIADPDIDVVCICTPSGLHAEHAIRAMRAGKHVIVEKPMEVTREACDRMVRVQRETGRKLTVISQHRFDPAAILVKEAIDSGKLGKIILADASVKWWRKQEYYDVAPWRGTWAMDGGGSLMNQGVHTMDVLQWLVGGVASVFAHTATGAHEIETEDVAVAALKFNCGAIGTLTATTAAFPGLPARIDIYGTEGSAIIEGDRLKQMVLKNGQTFTAEDAAKDAVAVAQGGTASVKDEATRRAAFGDKKAGWGDAHRAQILDLIRAIREDGRPLLDGSAARKPVGVILAVYESARTGRQVTVADMDVETTTGTAPESVMPVAQIKRKARAAAEAAPAIG

Samples

Sample ID Description Type Environment
1 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
37 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
56 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
57 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
67 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
74 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
86 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
87 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
94 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
118 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
119 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
120 2738541295 Bacillus sp. OK085 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.97
Metatranscriptomes 0.61
Isolates 2.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.61
Rhizoplane 6.06
Rhizosphere 90.91
Stem 0
Stem Tuber 0
Unclassified 6.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395905_0135473 3300037471 Bacteria 2317
2 Ga0065707_10090396 3300005295 Bacteria 4149
3 Ga0070676_10009165 3300005328 Bacteria 5353
4 Ga0070680_100354983 3300005336 Bacteria 1247
5 Ga0070691_10005366 3300005341 Bacteria 5832
6 Ga0070714_100141657 3300005435 Bacteria 2159
7 Ga0070713_100276971 3300005436 Bacteria 1538
8 Ga0070701_10034485 3300005438 Bacteria 2535
9 Ga0070705_100021253 3300005440 Bacteria 3449
10 Ga0070694_100064917 3300005444 Bacteria 2500
11 Ga0070694_100111297 3300005444 Bacteria 1951
12 Ga0070708_100051263 3300005445 Bacteria 3656
13 Ga0068867_100048715 3300005459 Bacteria 3118
14 Ga0070706_100002427 3300005467 Bacteria 18773
15 Ga0070706_100156161 3300005467 Bacteria 2130
16 Ga0070706_100289676 3300005467 Bacteria 1528
17 Ga0070707_100033436 3300005468 Bacteria 4903
18 Ga0070698_100098893 3300005471 Bacteria 2891
19 Ga0070698_100292034 3300005471 Bacteria 1561
20 Ga0070698_100295045 3300005471 Bacteria 1552
21 Ga0070699_100017868 3300005518 Bacteria 6090
22 Ga0070679_100086719 3300005530 Bacteria 3117
23 Ga0070679_100295945 3300005530 Bacteria 1570
24 Ga0070697_100076462 3300005536 Bacteria 2753
25 Ga0070697_100461756 3300005536 Unclassified 1107
26 Ga0070665_100000230 3300005548 Bacteria 92897
27 Ga0070704_100003495 3300005549 Bacteria 9024
28 Ga0068855_100007730 3300005563 Bacteria 12984
29 Ga0068857_100020714 3300005577 Bacteria 5786
30 Ga0068854_100013879 3300005578 Bacteria 5298
31 Ga0068854_100039680 3300005578 Bacteria 3318
32 Ga0068861_100004761 3300005719 Bacteria 9120
33 Ga0081455_10034068 3300005937 Bacteria 4567
34 Ga0070717_10065057 3300006028 Unclassified 3030
35 Ga0070716_100130057 3300006173 Bacteria 1590
36 Ga0075428_100051657 3300006844 Bacteria 4507
37 Ga0105240_10004736 3300009093 Bacteria 20539
38 Ga0105240_10035749 3300009093 Bacteria 6398
39 Ga0114129_10641545 3300009147 Bacteria 1372
40 Ga0105243_10128531 3300009148 Bacteria 2147
41 Ga0105248_10272558 3300009177 Bacteria 1905
42 Ga0105238_10000036 3300009551 Bacteria 165343
43 Ga0157370_10091796 3300013104 Bacteria 2851
44 Ga0157372_10111716 3300013307 Bacteria 3131
45 Ga0213874_10012711 3300021377 Bacteria 2165
46 Ga0224712_10003903 3300022467 Bacteria 3950
47 Ga0207645_10010409 3300025907 Bacteria 6382
48 Ga0207684_10055915 3300025910 Bacteria 3347
49 Ga0207684_10106325 3300025910 Bacteria 2400
50 Ga0207707_10266366 3300025912 Bacteria 1486
51 Ga0207695_10006751 3300025913 Bacteria 14805
52 Ga0207695_10178414 3300025913 Bacteria 2046
53 Ga0207646_10116085 3300025922 Bacteria 2404
54 Ga0207646_10228931 3300025922 Bacteria 1679
55 Ga0207694_10000670 3300025924 Bacteria 30771
56 Ga0207700_10182864 3300025928 Bacteria 1757
57 Ga0207704_10080356 3300025938 Bacteria 2105
58 Ga0207667_10044459 3300025949 Bacteria 4706
59 Ga0207640_10075911 3300025981 Bacteria 2279
60 Ga0207640_10130530 3300025981 Bacteria 1816
61 Ga0207708_10001326 3300026075 Bacteria 18608
62 Ga0207648_10063574 3300026089 Bacteria 3217
63 Ga0207674_10003531 3300026116 Bacteria 19090
64 Ga0207675_100006270 3300026118 Bacteria 11286
65 Ga0207675_100250732 3300026118 Bacteria 1713
66 Ga0268266_10000261 3300028379 Bacteria 88643
67 Ga0268266_10179314 3300028379 Bacteria 1928
68 Ga0265319_1008903 3300028563 Bacteria 4342
69 Ga0265319_1055855 3300028563 Bacteria 1291
70 Ga0265338_10003410 3300028800 Bacteria 22416
71 Ga0265338_10006221 3300028800 Bacteria 15283
72 Ga0265332_10016135 3300031238 Bacteria 3294
73 Ga0265320_10012206 3300031240 Bacteria 5014
74 Ga0265325_10000912 3300031241 Bacteria 21341
75 Ga0265325_10049027 3300031241 Bacteria 2181
76 Ga0265340_10047607 3300031247 Bacteria 2087
77 Ga0265339_10013042 3300031249 Bacteria 5049
78 Ga0265331_10000101 3300031250 Bacteria 115635
79 Ga0265331_10073161 3300031250 Bacteria 1601
80 Ga0265327_10001544 3300031251 Bacteria 28362
81 Ga0265316_10008322 3300031344 Bacteria 9629
82 Ga0265313_10001173 3300031595 Bacteria 25092
83 Ga0265313_10004321 3300031595 Bacteria 10996
84 Ga0265313_10016675 3300031595 Bacteria 4214
85 Ga0265314_10000308 3300031711 Bacteria 69876
86 Ga0265342_10000052 3300031712 Bacteria 123865
87 Ga0265342_10019235 3300031712 Bacteria 4405
88 Ga0307413_10141357 3300031824 Unclassified 1664
89 Ga0373956_0001783 3300035119 Bacteria 8874
90 Ga0373927_0000164 3300035695 Bacteria 51851
91 Ga0373933_0010646 3300035724 Bacteria 5044
92 Ga0395905_0355751 3300037471 Bacteria 1357
93 Ga0395901_0053544 3300038443 Bacteria 4193
94 Ga0436360_0991212 3300039438 Bacteria 1275
95 Ga0451577_0378432 3300042876 Bacteria 1285
96 Ga0466969_0002907 3300044656 Bacteria 9143
97 Ga0466969_0077164 3300044656 Bacteria 1594
98 Ga0453683_0004037 3300044673 Bacteria 10577
99 Ga0453683_0006382 3300044673 Bacteria 8096
100 Ga0453683_0020711 3300044673 Unclassified 4202
101 Ga0466966_0000484 3300044684 Bacteria 25546
102 Ga0466966_0011253 3300044684 Bacteria 5938
103 Ga0466966_0028281 3300044684 Bacteria 3652
104 Ga0466961_0077846 3300044693 Bacteria 2100
105 Ga0466964_0000106 3300044706 Bacteria 20835
106 Ga0453684_0088690 3300044712 Bacteria 3829
107 Ga0453684_0102188 3300044712 Unclassified 3505
108 Ga0453684_0462822 3300044712 Unclassified 1410
109 Ga0466968_0001719 3300044735 Bacteria 7896
110 Ga0466970_0001505 3300044765 Bacteria 11221
111 Ga0466959_0022572 3300045049 Unclassified 4653
112 Ga0466959_0025898 3300045049 Bacteria 4350
113 Ga0451576_0000229 3300045051 Bacteria 136407
114 Ga0451576_0300017 3300045051 Unclassified 1680
115 Ga0466958_0002488 3300045836 Bacteria 9279
116 Ga0466958_0026204 3300045836 Bacteria 3444
117 Ga0466967_0316313 3300045976 Bacteria 1505
118 Ga0495582_0028829 3300046473 Bacteria 3047
119 Ga0495662_0073738 3300046476 Bacteria 1656
120 Ga0495608_0008485 3300046511 Bacteria 7199
121 Ga0495587_0075944 3300046536 Bacteria 1951
122 Ga0495667_0079199 3300046559 Bacteria 2136
123 Ga0495624_0005319 3300046690 Bacteria 9299
124 Ga0495674_0050025 3300047319 Bacteria 3689
125 Ga0495684_0018975 3300047471 Bacteria 5295
126 Ga0495602_0177585 3300048088 Bacteria 1646
127 Ga0496100_0146226 3300048903 Bacteria 1681
128 Ga0496105_0010107 3300048908 Bacteria 7411
129 Ga0496108_0170319 3300048911 Bacteria 1884
130 Ga0496109_0085392 3300048912 Bacteria 2913
131 Ga0496112_0270187 3300048915 Bacteria 1649
132 Ga0496113_0137034 3300048916 Bacteria 1924
133 Ga0496114_0013249 3300048917 Bacteria 6610
134 Ga0496115_0050856 3300048918 Bacteria 3322
135 Ga0496115_0064385 3300048918 Unclassified 2959
136 Ga0496115_0134545 3300048918 Bacteria 2038
137 Ga0501034_0006031 3300049571 Bacteria 13098
138 Ga0501034_0022042 3300049571 Bacteria 6489
139 Ga0501034_0026077 3300049571 Bacteria 5952
140 Ga0501034_0084500 3300049571 Bacteria 3176
141 Ga0501034_0095240 3300049571 Bacteria 2974
142 Ga0501037_0037214 3300049573 Bacteria 3587
143 Ga0501043_0163636 3300049579 Bacteria 1738
144 Ga0501046_0090021 3300049580 Unclassified 2361
145 Ga0501046_0126671 3300049580 Bacteria 1939
146 Ga0501047_0109742 3300049581 Bacteria 2642
147 Ga0501070_0000113 3300049586 Bacteria 71555
148 Ga0501071_0192821 3300049587 Bacteria 1529
149 Ga0501072_0026251 3300049588 Bacteria 4541
150 Ga0501076_0020886 3300049592 Bacteria 5014
151 Ga0501035_0147343 3300049822 Bacteria 2044
152 Ga0501044_0005113 3300049823 Bacteria 14631
153 Ga0501044_0008835 3300049823 Bacteria 11019
154 Ga0501044_0021806 3300049823 Bacteria 6831
155 Ga0501044_0075116 3300049823 Unclassified 3432
156 Ga0501045_0068140 3300049824 Bacteria 2614
157 Ga0495601_0037109 3300053077 Bacteria 3046
158 Ga0495601_0057324 3300053077 Bacteria 2468
159 Ga0495619_0083194 3300053085 Bacteria 2158
160 Ga0495619_0254991 3300053085 Bacteria 1215
161 Ga0466962_0054432 3300061719 Bacteria 1912
162 2616555247 2615840698 Bacteria 7319877
163 2673161393 2671180531 Bacteria 9045424
164 2687240465 2684623219 Bacteria 8442773
165 2738814462 2738541295 Bacteria 5730091
166 Ga0395905_0135473
167 Ga0065707_10090396
168 Ga0070676_10009165
169 Ga0070680_100354983
170 Ga0070691_10005366
171 Ga0070714_100141657
172 Ga0070713_100276971
173 Ga0070701_10034485
174 Ga0070705_100021253
175 Ga0070694_100064917
176 Ga0070694_100111297
177 Ga0070708_100051263
178 Ga0068867_100048715
179 Ga0070706_100002427
180 Ga0070706_100156161
181 Ga0070706_100289676
182 Ga0070707_100033436
183 Ga0070698_100098893
184 Ga0070698_100292034
185 Ga0070698_100295045
186 Ga0070699_100017868
187 Ga0070679_100086719
188 Ga0070679_100295945
189 Ga0070697_100076462
190 Ga0070697_100461756
191 Ga0070665_100000230
192 Ga0070704_100003495
193 Ga0068855_100007730
194 Ga0068857_100020714
195 Ga0068854_100013879
196 Ga0068854_100039680
197 Ga0068861_100004761
198 Ga0081455_10034068
199 Ga0070717_10065057
200 Ga0070716_100130057
201 Ga0075428_100051657
202 Ga0105240_10004736
203 Ga0105240_10035749
204 Ga0114129_10641545
205 Ga0105243_10128531
206 Ga0105248_10272558
207 Ga0105238_10000036
208 Ga0157370_10091796
209 Ga0157372_10111716
210 Ga0213874_10012711
211 Ga0224712_10003903
212 Ga0207645_10010409
213 Ga0207684_10055915
214 Ga0207684_10106325
215 Ga0207707_10266366
216 Ga0207695_10006751
217 Ga0207695_10178414
218 Ga0207646_10116085
219 Ga0207646_10228931
220 Ga0207694_10000670
221 Ga0207700_10182864
222 Ga0207704_10080356
223 Ga0207667_10044459
224 Ga0207640_10075911
225 Ga0207640_10130530
226 Ga0207708_10001326
227 Ga0207648_10063574
228 Ga0207674_10003531
229 Ga0207675_100006270
230 Ga0207675_100250732
231 Ga0268266_10000261
232 Ga0268266_10179314
233 Ga0265319_1008903
234 Ga0265319_1055855
235 Ga0265338_10003410
236 Ga0265338_10006221
237 Ga0265332_10016135
238 Ga0265320_10012206
239 Ga0265325_10000912
240 Ga0265325_10049027
241 Ga0265340_10047607
242 Ga0265339_10013042
243 Ga0265331_10000101
244 Ga0265331_10073161
245 Ga0265327_10001544
246 Ga0265316_10008322
247 Ga0265313_10001173
248 Ga0265313_10004321
249 Ga0265313_10016675
250 Ga0265314_10000308
251 Ga0265342_10000052
252 Ga0265342_10019235
253 Ga0307413_10141357
254 Ga0373956_0001783
255 Ga0373927_0000164
256 Ga0373933_0010646
257 Ga0395905_0355751
258 Ga0395901_0053544
259 Ga0436360_0991212
260 Ga0451577_0378432
261 Ga0466969_0002907
262 Ga0466969_0077164
263 Ga0453683_0004037
264 Ga0453683_0006382
265 Ga0453683_0020711
266 Ga0466966_0000484
267 Ga0466966_0011253
268 Ga0466966_0028281
269 Ga0466961_0077846
270 Ga0466964_0000106
271 Ga0453684_0088690
272 Ga0453684_0102188
273 Ga0453684_0462822
274 Ga0466968_0001719
275 Ga0466970_0001505
276 Ga0466959_0022572
277 Ga0466959_0025898
278 Ga0451576_0000229
279 Ga0451576_0300017
280 Ga0466958_0002488
281 Ga0466958_0026204
282 Ga0466967_0316313
283 Ga0495582_0028829
284 Ga0495662_0073738
285 Ga0495608_0008485
286 Ga0495587_0075944
287 Ga0495667_0079199
288 Ga0495624_0005319
289 Ga0495674_0050025
290 Ga0495684_0018975
291 Ga0495602_0177585
292 Ga0496100_0146226
293 Ga0496105_0010107
294 Ga0496108_0170319
295 Ga0496109_0085392
296 Ga0496112_0270187
297 Ga0496113_0137034
298 Ga0496114_0013249
299 Ga0496115_0050856
300 Ga0496115_0064385
301 Ga0496115_0134545
302 Ga0501034_0006031
303 Ga0501034_0022042
304 Ga0501034_0026077
305 Ga0501034_0084500
306 Ga0501034_0095240
307 Ga0501037_0037214
308 Ga0501043_0163636
309 Ga0501046_0090021
310 Ga0501046_0126671
311 Ga0501047_0109742
312 Ga0501070_0000113
313 Ga0501071_0192821
314 Ga0501072_0026251
315 Ga0501076_0020886
316 Ga0501035_0147343
317 Ga0501044_0005113
318 Ga0501044_0008835
319 Ga0501044_0021806
320 Ga0501044_0075116
321 Ga0501045_0068140
322 Ga0495601_0037109
323 Ga0495601_0057324
324 Ga0495619_0083194
325 Ga0495619_0254991
326 Ga0466962_0054432
327 2616555247
328 2673161393
329 2687240465
330 2738814462

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

20

139

0.98

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

148

271

0.98

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

26

137

0.88

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

151

375

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_F crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9445 1 348
3q2k-assembly2.cif.gz_L crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9442 1 348
3q2k-assembly1.cif.gz_B crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9438 1 348
3q2k-assembly2.cif.gz_P crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9429 1 348
3q2k-assembly2.cif.gz_O crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.9424 2 348
ID Description Score Start End Superfamily
3db2C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.965 3 117 3.40.50.720
af_P39353_1_125_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9646 3 127 3.40.50.720
af_M9PE54_6_126_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.948 3 117 3.40.50.720
af_Q2G1E6_2_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9472 2 118 3.40.50.720
2glxE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9448 4 119 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q3RX11-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9934 1 125 GO:0000166
GO:0003824
AF-A0A836SQT7-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.99 2 145 GO:0000166
AF-A0A7V4XCQ8-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9828 3 348 GO:0000166
GO:0016491
AF-A0A2V8W3V3-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9718 1 142 GO:0000166
AF-A0A7V4XCQ8-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9714 3 348 GO:0000166
GO:0016491

Map