F246486

General Info

Members Datasets Scaffolds Average Seq Length
165 85 330 476

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100123588|Ga0307408_1001235881
Length 505
Sequence LKKPDEIPNVRLCFIEYDKKNNWIKRMTTRKAKIVATIGPASESEEMLEKLTLAGMNVARMNFSHGSHEQHAERIGRLRKVSEKLNVPVGILQDLQGPKIRVGELEEPIQLEPGEEVTLYATGTTPPADSLKKIPVDFRQLFDSCRLSDRLLLDDGRLALEVISVKTRDALTAKVVVGGRLTSHKGINLPGVRLRIAGFTEKDEADLAFGIAHGVDAVAISFVRSVDDVKQVRYALERFSNGKRLPLLIAKLEKPEALDNLNEILDNVDGVMVARGDLGVELPPERVPVQQKHIIRTANLRAKLVITATQMLESMITNPLPTRAEASDVANAVFDGTDAVMLSAETAVGKYPVDAIQMMDRIVREAESHYLEWGLEQHVTGFEHSDAASMVRAAQALANDENVTAVACFTTRGQTAWLMSKIRPRVPIMAFTPDPHTFYRLAFLWGARPQLVPFVNSLEEMLDHVDQALARSDVVQVGDQVVLVCGFPVGAIRPPNMALLHTVGK

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
51 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
52 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
58 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
73 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
74 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
75 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
76 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
83 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
84 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
85 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.39
Metatranscriptomes 0.61
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 2.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100123588 3300031548 Bacteria 2009
2 SwRhRL2b_contig_2611936 2162886007 Bacteria 8248
3 SwRhRL2b_contig_540759 2162886007 Bacteria 8248
4 Ga0065704_10074618 3300005289 Bacteria 6128
5 Ga0065707_10000596 3300005295 Bacteria 26460
6 Ga0065707_10001172 3300005295 Bacteria 8984
7 Ga0065707_10093446 3300005295 Bacteria 3627
8 Ga0070690_100002040 3300005330 Bacteria 10768
9 Ga0070670_100008829 3300005331 Bacteria 8604
10 Ga0070666_10057357 3300005335 Bacteria 2631
11 Ga0068868_100071459 3300005338 Bacteria 2768
12 Ga0070661_100003410 3300005344 Bacteria 10979
13 Ga0070673_100009461 3300005364 Bacteria 6541
14 Ga0070667_100030242 3300005367 Bacteria 4516
15 Ga0070694_100102561 3300005444 Bacteria 2026
16 Ga0070698_100008903 3300005471 Bacteria 10790
17 Ga0070698_100025868 3300005471 Bacteria 6115
18 Ga0070698_100253328 3300005471 Bacteria 1693
19 Ga0070699_100016087 3300005518 Bacteria 6422
20 Ga0070699_100064833 3300005518 Bacteria 3169
21 Ga0068859_100171822 3300005617 Bacteria 2248
22 Ga0068864_100005968 3300005618 Bacteria 9993
23 Ga0068863_100179953 3300005841 Bacteria 2029
24 Ga0068858_100138358 3300005842 Bacteria 2286
25 Ga0081539_10024285 3300005985 Unclassified 3939
26 Ga0081539_10053960 3300005985 Bacteria 2247
27 Ga0097621_100025931 3300006237 Bacteria 4592
28 Ga0068871_100042016 3300006358 Bacteria 3668
29 Ga0075430_100003782 3300006846 Bacteria 12722
30 Ga0075431_100003923 3300006847 Bacteria 14485
31 Ga0075431_100041500 3300006847 Bacteria 4744
32 Ga0075431_100061025 3300006847 Bacteria 3891
33 Ga0075433_10151680 3300006852 Bacteria 2061
34 Ga0075433_10154977 3300006852 Bacteria 2038
35 Ga0075434_100065788 3300006871 Bacteria 3610
36 Ga0075429_100009127 3300006880 Bacteria 8607
37 Ga0075429_100012241 3300006880 Bacteria 7440
38 Ga0075429_100043687 3300006880 Bacteria 3899
39 Ga0097620_100171824 3300006931 Bacteria 2248
40 Ga0111539_10004764 3300009094 Bacteria 17713
41 Ga0114129_10000357 3300009147 Bacteria 52960
42 Ga0114129_10031031 3300009147 Bacteria 7558
43 Ga0114129_10061201 3300009147 Bacteria 5261
44 Ga0114129_10129808 3300009147 Bacteria 3463
45 Ga0114129_10139546 3300009147 Bacteria 3324
46 Ga0114129_10145325 3300009147 Bacteria 3249
47 Ga0105242_10020080 3300009176 Bacteria 5236
48 Ga0105248_10063192 3300009177 Bacteria 4156
49 Ga0105249_10118280 3300009553 Bacteria 2515
50 Ga0163162_10074405 3300013306 Bacteria 3456
51 Ga0157375_10009755 3300013308 Bacteria 8440
52 Ga0157375_10030757 3300013308 Bacteria 5067
53 Ga0163163_10069012 3300014325 Bacteria 3518
54 Ga0207650_10004707 3300025925 Bacteria 9324
55 Ga0207679_10044862 3300025945 Bacteria 3193
56 Ga0207658_10011201 3300025986 Bacteria 6110
57 Ga0207677_10042125 3300026023 Bacteria 3025
58 Ga0268265_10107604 3300028380 Bacteria 2268
59 Ga0265322_10002301 3300028654 Bacteria 5923
60 Ga0265340_10001497 3300031247 Bacteria 13377
61 Ga0265327_10003105 3300031251 Bacteria 16369
62 Ga0265316_10037276 3300031344 Bacteria 3926
63 Ga0265316_10059472 3300031344 Bacteria 2972
64 Ga0316575_10000724 3300031665 Bacteria 9915
65 Ga0316576_10028193 3300031727 Unclassified 3955
66 Ga0316578_10011441 3300031728 Bacteria 4644
67 Ga0316577_10000364 3300031733 Bacteria 17032
68 Ga0316577_10000795 3300031733 Bacteria 13644
69 Ga0316577_10001562 3300031733 Bacteria 10889
70 Ga0307411_10170716 3300032005 Bacteria 1640
71 Ga0316585_10000005 3300032137 Bacteria 32299
72 Ga0316585_10001379 3300032137 Bacteria 6393
73 Ga0316580_10002155 3300032139 Bacteria 5358
74 Ga0316593_10008379 3300032168 Bacteria 2880
75 Ga0316574_0028169 3300035398 Bacteria 3386
76 Ga0316574_0031606 3300035398 Bacteria 3211
77 Ga0316574_0043584 3300035398 Bacteria 2772
78 Ga0316574_0147125 3300035398 Unclassified 1519
79 Ga0373937_0010329 3300036401 Bacteria 8151
80 Ga0373937_0094335 3300036401 Bacteria 2775
81 Ga0316582_0009425 3300036647 Bacteria 5300
82 Ga0316582_0011822 3300036647 Bacteria 4843
83 Ga0316582_0033712 3300036647 Bacteria 3148
84 Ga0316582_0037761 3300036647 Bacteria 2997
85 Ga0316582_0076840 3300036647 Bacteria 2172
86 Ga0316584_0007998 3300036712 Bacteria 7259
87 Ga0316584_0173241 3300036712 Bacteria 1599
88 Ga0316581_0007940 3300037588 Bacteria 2870
89 Ga0451577_0002553 3300042876 Bacteria 21487
90 Ga0451577_0002865 3300042876 Bacteria 19838
91 Ga0451577_0023004 3300042876 Bacteria 5688
92 Ga0451577_0057690 3300042876 Bacteria 3461
93 Ga0451577_0068896 3300042876 Bacteria 3155
94 Ga0451577_0089522 3300042876 Bacteria 2746
95 Ga0451577_0122373 3300042876 Bacteria 2331
96 Ga0451577_0127587 3300042876 Bacteria 2280
97 Ga0453683_0001110 3300044673 Bacteria 24607
98 Ga0453683_0014283 3300044673 Bacteria 5160
99 Ga0453683_0015329 3300044673 Bacteria 4965
100 Ga0453683_0024437 3300044673 Bacteria 3844
101 Ga0453683_0039969 3300044673 Bacteria 2947
102 Ga0453684_0000021 3300044712 Bacteria 873490
103 Ga0453684_0000023 3300044712 Bacteria 857153
104 Ga0453684_0000169 3300044712 Bacteria 289762
105 Ga0453684_0001285 3300044712 Bacteria 74890
106 Ga0453684_0001972 3300044712 Bacteria 52694
107 Ga0453684_0004952 3300044712 Bacteria 27138
108 Ga0453684_0007072 3300044712 Bacteria 20965
109 Ga0453684_0009092 3300044712 Bacteria 17516
110 Ga0453684_0010152 3300044712 Bacteria 16164
111 Ga0453684_0021605 3300044712 Bacteria 9601
112 Ga0453684_0023734 3300044712 Bacteria 9009
113 Ga0453684_0033336 3300044712 Bacteria 7184
114 Ga0453684_0044658 3300044712 Bacteria 5923
115 Ga0453684_0051169 3300044712 Bacteria 5420
116 Ga0453684_0078989 3300044712 Bacteria 4114
117 Ga0453684_0092252 3300044712 Bacteria 3734
118 Ga0453684_0097275 3300044712 Bacteria 3613
119 Ga0453684_0101489 3300044712 Bacteria 3520
120 Ga0453684_0146259 3300044712 Bacteria 2814
121 Ga0453684_0212671 3300044712 Bacteria 2246
122 Ga0453684_0287262 3300044712 Bacteria 1874
123 Ga0453684_0318751 3300044712 Bacteria 1761
124 Ga0451576_0000164 3300045051 Bacteria 168460
125 Ga0451576_0002836 3300045051 Bacteria 24930
126 Ga0451576_0004311 3300045051 Bacteria 18582
127 Ga0451576_0009808 3300045051 Bacteria 11066
128 Ga0451576_0014811 3300045051 Bacteria 8667
129 Ga0451576_0032268 3300045051 Bacteria 5580
130 Ga0495592_0012066 3300046454 Bacteria 6551
131 Ga0495639_0028215 3300046475 Bacteria 2487
132 Ga0495608_0006330 3300046511 Bacteria 8397
133 Ga0495657_0000317 3300046675 Bacteria 44375
134 Ga0495613_0035677 3300046689 Bacteria 3689
135 Ga0495672_0041174 3300047320 Bacteria 2796
136 Ga0501031_0021613 3300049568 Bacteria 4195
137 Ga0501040_0079619 3300049576 Bacteria 2268
138 Ga0501041_0044314 3300049577 Bacteria 2705
139 Ga0501048_0020718 3300049582 Bacteria 4820
140 Ga0501071_0168474 3300049587 Bacteria 1639
141 Ga0501075_0010496 3300049591 Bacteria 6510
142 Ga0501075_0013267 3300049591 Bacteria 5879
143 Ga0501076_0021957 3300049592 Bacteria 4902
144 Ga0501076_0176382 3300049592 Bacteria 1742
145 Ga0501079_0076127 3300049741 Bacteria 2596
146 Ga0501080_0170544 3300049742 Bacteria 2007
147 Ga0501035_0165759 3300049822 Bacteria 1911
148 Ga0501045_0025799 3300049824 Bacteria 4226
149 nmdc:mga05p37_103463_c1 3300050507 Bacteria 3505
150 nmdc:mga05p37_166318_c1 3300050507 Bacteria 2691
151 nmdc:mga05p37_232788_c1 3300050507 Bacteria 2219
152 nmdc:mga05p37_32094_c2 3300050507 Bacteria 6108
153 nmdc:mga05p37_36686_c1 3300050507 Bacteria 6012
154 nmdc:mga05p37_494_c1 3300050507 Bacteria 43235
155 nmdc:mga09592_13466_c1 3300050508 Bacteria 6677
156 nmdc:mga09592_75606_c1 3300050508 Bacteria 2864
157 nmdc:mga06r32_10495_c1 3300050510 Bacteria 8355
158 nmdc:mga06r32_209015_c1 3300050510 Unclassified 1939
159 nmdc:mga06r32_210506_c1 3300050510 Bacteria 1932
160 nmdc:mga06r32_51121_c1 3300050510 Bacteria 3954
161 nmdc:mga0n895_21866_c1 3300050512 Bacteria 5989
162 nmdc:mga0a205_202452_c1 3300050515 Bacteria 1875
163 Ga0501084_0013175 3300054114 Bacteria 6841
164 Ga0501084_0027010 3300054114 Bacteria 4796
165 Ga0530510_0142866 3300061734 Bacteria 1764
166 Ga0307408_100123588
167 SwRhRL2b_contig_2611936
168 SwRhRL2b_contig_540759
169 Ga0065704_10074618
170 Ga0065707_10000596
171 Ga0065707_10001172
172 Ga0065707_10093446
173 Ga0070690_100002040
174 Ga0070670_100008829
175 Ga0070666_10057357
176 Ga0068868_100071459
177 Ga0070661_100003410
178 Ga0070673_100009461
179 Ga0070667_100030242
180 Ga0070694_100102561
181 Ga0070698_100008903
182 Ga0070698_100025868
183 Ga0070698_100253328
184 Ga0070699_100016087
185 Ga0070699_100064833
186 Ga0068859_100171822
187 Ga0068864_100005968
188 Ga0068863_100179953
189 Ga0068858_100138358
190 Ga0081539_10024285
191 Ga0081539_10053960
192 Ga0097621_100025931
193 Ga0068871_100042016
194 Ga0075430_100003782
195 Ga0075431_100003923
196 Ga0075431_100041500
197 Ga0075431_100061025
198 Ga0075433_10151680
199 Ga0075433_10154977
200 Ga0075434_100065788
201 Ga0075429_100009127
202 Ga0075429_100012241
203 Ga0075429_100043687
204 Ga0097620_100171824
205 Ga0111539_10004764
206 Ga0114129_10000357
207 Ga0114129_10031031
208 Ga0114129_10061201
209 Ga0114129_10129808
210 Ga0114129_10139546
211 Ga0114129_10145325
212 Ga0105242_10020080
213 Ga0105248_10063192
214 Ga0105249_10118280
215 Ga0163162_10074405
216 Ga0157375_10009755
217 Ga0157375_10030757
218 Ga0163163_10069012
219 Ga0207650_10004707
220 Ga0207679_10044862
221 Ga0207658_10011201
222 Ga0207677_10042125
223 Ga0268265_10107604
224 Ga0265322_10002301
225 Ga0265340_10001497
226 Ga0265327_10003105
227 Ga0265316_10037276
228 Ga0265316_10059472
229 Ga0316575_10000724
230 Ga0316576_10028193
231 Ga0316578_10011441
232 Ga0316577_10000364
233 Ga0316577_10000795
234 Ga0316577_10001562
235 Ga0307411_10170716
236 Ga0316585_10000005
237 Ga0316585_10001379
238 Ga0316580_10002155
239 Ga0316593_10008379
240 Ga0316574_0028169
241 Ga0316574_0031606
242 Ga0316574_0043584
243 Ga0316574_0147125
244 Ga0373937_0010329
245 Ga0373937_0094335
246 Ga0316582_0009425
247 Ga0316582_0011822
248 Ga0316582_0033712
249 Ga0316582_0037761
250 Ga0316582_0076840
251 Ga0316584_0007998
252 Ga0316584_0173241
253 Ga0316581_0007940
254 Ga0451577_0002553
255 Ga0451577_0002865
256 Ga0451577_0023004
257 Ga0451577_0057690
258 Ga0451577_0068896
259 Ga0451577_0089522
260 Ga0451577_0122373
261 Ga0451577_0127587
262 Ga0453683_0001110
263 Ga0453683_0014283
264 Ga0453683_0015329
265 Ga0453683_0024437
266 Ga0453683_0039969
267 Ga0453684_0000021
268 Ga0453684_0000023
269 Ga0453684_0000169
270 Ga0453684_0001285
271 Ga0453684_0001972
272 Ga0453684_0004952
273 Ga0453684_0007072
274 Ga0453684_0009092
275 Ga0453684_0010152
276 Ga0453684_0021605
277 Ga0453684_0023734
278 Ga0453684_0033336
279 Ga0453684_0044658
280 Ga0453684_0051169
281 Ga0453684_0078989
282 Ga0453684_0092252
283 Ga0453684_0097275
284 Ga0453684_0101489
285 Ga0453684_0146259
286 Ga0453684_0212671
287 Ga0453684_0287262
288 Ga0453684_0318751
289 Ga0451576_0000164
290 Ga0451576_0002836
291 Ga0451576_0004311
292 Ga0451576_0009808
293 Ga0451576_0014811
294 Ga0451576_0032268
295 Ga0495592_0012066
296 Ga0495639_0028215
297 Ga0495608_0006330
298 Ga0495657_0000317
299 Ga0495613_0035677
300 Ga0495672_0041174
301 Ga0501031_0021613
302 Ga0501040_0079619
303 Ga0501041_0044314
304 Ga0501048_0020718
305 Ga0501071_0168474
306 Ga0501075_0010496
307 Ga0501075_0013267
308 Ga0501076_0021957
309 Ga0501076_0176382
310 Ga0501079_0076127
311 Ga0501080_0170544
312 Ga0501035_0165759
313 Ga0501045_0025799
314 nmdc:mga05p37_103463_c1
315 nmdc:mga05p37_166318_c1
316 nmdc:mga05p37_232788_c1
317 nmdc:mga05p37_32094_c2
318 nmdc:mga05p37_36686_c1
319 nmdc:mga05p37_494_c1
320 nmdc:mga09592_13466_c1
321 nmdc:mga09592_75606_c1
322 nmdc:mga06r32_10495_c1
323 nmdc:mga06r32_209015_c1
324 nmdc:mga06r32_210506_c1
325 nmdc:mga06r32_51121_c1
326 nmdc:mga0n895_21866_c1
327 nmdc:mga0a205_202452_c1
328 Ga0501084_0013175
329 Ga0501084_0027010
330 Ga0530510_0142866

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00224

PK

Pyruvate kinase, barrel domain

29

356

0.97

PF02887

PK_C

Pyruvate kinase, alpha/beta domain

388

501

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8iat-assembly1.cif.gz_B crystal structure of streptococcus pneumoniae pyruvate kinase in complex with oxalate 0.9306 1 461
8iat-assembly1.cif.gz_B crystal structure of streptococcus pneumoniae pyruvate kinase in complex with oxalate 0.9248 1 461
4hyv-assembly1.cif.gz_A pyruvate kinase (pyk) from trypanosoma brucei in the presence of magnesium, pep and f26bp 0.9205 3 461
7ueh-assembly3.cif.gz_C pyruvate kinase from zymomonas mobilis 0.9176 2 460
6k0k-assembly1.cif.gz_B crystal structure of escherichia coli pyruvate kinase ii 0.9176 3 461
ID Description Score Start End Superfamily
af_A0A0R0KTV1_6_81_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 1.004 244 317 3.20.20.60
af_A0A1D6HTM6_314_477_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9727 156 318 3.20.20.60
af_I1LWM3_39_202_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9707 156 320 3.20.20.60
af_A0A0R0KTV1_6_81_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9646 244 317 3.20.20.60
af_Q9M044_165_326_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9642 154 316 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A481XTN8-F1-model_v4 Pyruvate kinase (EC 2.7.1.40) 0.998 228 326 GO:0000287
GO:0004743
GO:0005524
GO:0016301
GO:0030955
AF-X0X5K8-F1-model_v4 pyruvate kinase (EC 2.7.1.40) 0.997 243 329 GO:0000287
GO:0004743
GO:0005524
GO:0016301
GO:0030955
AF-A0A378W3U9-F1-model_v4 Pyruvate kinase (EC 2.7.1.40) 0.9941 253 329 GO:0000287
GO:0004743
GO:0005524
GO:0016301
GO:0030955
AF-A0A1G1JQK1-F1-model_v4 Pyruvate kinase (EC 2.7.1.40) 0.992 215 327 GO:0000287
GO:0004743
GO:0005524
GO:0016301
GO:0030955
AF-A0A7S3HA66-F1-model_v4 Pyruvate kinase (EC 2.7.1.40) 0.9895 207 328 GO:0000287
GO:0004743
GO:0005524
GO:0016301
GO:0030955

Map