F245061
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 164 | 144 | 140 | 277 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|643348564|643604980 |
| Length | 308 |
| Sequence | TTLAPAGRSSAGEAPAGHGAAPAVQAWGRVRAGRRTADRLLVVLCTVATVLGAIVLGSILVMLIVEGLRGFSPALFTEVTPGPGSQGGGIANAILGSLIMTLIGIVVATPIGVLAGTYLAEYGRTSKLADLIRFLNDILLSAPSILIGLFVYTVMVRTMGGYSGWAGGVALAIIATPVIVRTTEDMLRLVPSSLREAGAALGAPASIVIRAVSWKAAQAGIVTGILLALARIAGETAPLLFTALNNNSWFSANLMGGIANLPVMIYQFALSPYENWRQLAWAGALLITITILGLSIVARVFLQGGKSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2508501050 | Microvirga lupini Lut6 | Isolate | Nodule |
| 2 | 2508501114 | Microvirga lotononidis WSM3557 | Isolate | Nodule |
| 3 | 2545555834 | Methylobacterium sp. WSM2598 | Isolate | Nodule |
| 4 | 2595698237 | Methylobacterium sp. UNCCL125 | Isolate | Unclassified |
| 5 | 2738541281 | Methylobacterium sp. GV094 | Isolate | Unclassified |
| 6 | 2738543032 | Methylobacterium sp. GV104 | Isolate | Unclassified |
| 7 | 2773857925 | Microvirga vignae BR3299 | Isolate | Unclassified |
| 8 | 2775506901 | Microvirga ossetica V5/3m | Isolate | Unclassified |
| 9 | 2829745981 | Methylorubrum rhodinum DSM 2163 | Isolate | Rhizosphere |
| 10 | 2835312727 | Microvirga calopogonii CCBAU 65841 | Isolate | Nodule |
| 11 | 2842698319 | Methylobacterium sp. R-72139 | Isolate | Unclassified |
| 12 | 2861691609 | Methylorubrum thiocyanatum DSM 11490 | Isolate | Rhizosphere |
| 13 | 2882456835 | Microvirga sp. KLBC 81 | Isolate | Unclassified |
| 14 | 2884298095 | Microvirga thermotolerans HR1 | Isolate | Rhizosphere |
| 15 | 2889306138 | Methylobacterium sp. PvR107 | Isolate | Rhizosphere |
| 16 | 2894232714 | Microvirga tunisiensis Lmie10 | Isolate | Nodule |
| 17 | 2902330777 | Methylobacterium sp. 2A | Isolate | Unclassified |
| 18 | 2902405164 | Methylobacterium sp. P1-11 | Isolate | Unclassified |
| 19 | 2928125067 | Methylobacterium sp. 1973 | Isolate | Unclassified |
| 20 | 2939669807 | Kaistia defluvii 3207 | Isolate | Rhizosphere |
| 21 | 3003665799 | Methylobacterium aquaticum BG2 | Isolate | Unclassified |
| 22 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 33 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 37 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 40 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 41 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 42 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 43 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 45 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 46 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 47 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 48 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 49 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 55 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 58 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 70 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 71 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 72 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 73 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 74 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 75 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 76 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 77 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 78 | 3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Metagenome | Rhizosphere |
| 79 | 3300034818 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 | Metagenome | Rhizosphere |
| 80 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 81 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 82 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 83 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 84 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 85 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 86 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 87 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 88 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 89 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 90 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 91 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 92 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 93 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 94 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 95 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 96 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 97 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 98 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 99 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 100 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 119 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 120 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 121 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 122 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 123 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 124 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 125 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 129 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 138 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 140 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 141 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 142 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 143 | 641522639 | Methylobacterium sp. 4-46 | Isolate | Nodule |
| 144 | 643348564 | Methylobacterium nodulans ORS 2060 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.37 |
| Metatranscriptomes | 0 |
| Isolates | 14.63 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.83 |
| Nodule | 4.88 |
| Rhizoplane | 2.44 |
| Rhizosphere | 81.71 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.15 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10332262 | 3300005327 | Bacteria | 1299 |
| 2 | Ga0070676_10112865 | 3300005328 | Bacteria | 1695 |
| 3 | Ga0070680_100012861 | 3300005336 | Bacteria | 6511 |
| 4 | Ga0070692_10027694 | 3300005345 | Bacteria | 2811 |
| 5 | Ga0070667_100000212 | 3300005367 | Bacteria | 67792 |
| 6 | Ga0070703_10005029 | 3300005406 | Bacteria | 3690 |
| 7 | Ga0070713_100047058 | 3300005436 | Bacteria | 3543 |
| 8 | Ga0070710_10003608 | 3300005437 | Bacteria | 7327 |
| 9 | Ga0070705_100000435 | 3300005440 | Bacteria | 23909 |
| 10 | Ga0070700_100020649 | 3300005441 | Bacteria | 3820 |
| 11 | Ga0070700_100364077 | 3300005441 | Bacteria | 1076 |
| 12 | Ga0070694_100001961 | 3300005444 | Bacteria | 12202 |
| 13 | Ga0070694_100214425 | 3300005444 | Bacteria | 1441 |
| 14 | Ga0070663_100013743 | 3300005455 | Bacteria | 5176 |
| 15 | Ga0070678_100375623 | 3300005456 | Bacteria | 1229 |
| 16 | Ga0070662_100337139 | 3300005457 | Bacteria | 1233 |
| 17 | Ga0070681_10292756 | 3300005458 | Bacteria | 1538 |
| 18 | Ga0070706_100100157 | 3300005467 | Bacteria | 2692 |
| 19 | Ga0070699_100012836 | 3300005518 | Bacteria | 7223 |
| 20 | Ga0070679_100105925 | 3300005530 | Bacteria | 2798 |
| 21 | Ga0070697_100041538 | 3300005536 | Bacteria | 3723 |
| 22 | Ga0068853_100426119 | 3300005539 | Bacteria | 1245 |
| 23 | Ga0070695_100021946 | 3300005545 | Bacteria | 3912 |
| 24 | Ga0070696_100000223 | 3300005546 | Bacteria | 34303 |
| 25 | Ga0070704_100057682 | 3300005549 | Bacteria | 2762 |
| 26 | Ga0068857_100004310 | 3300005577 | Bacteria | 12001 |
| 27 | Ga0081455_10003311 | 3300005937 | Bacteria | 18633 |
| 28 | Ga0081455_10360798 | 3300005937 | Bacteria | 1022 |
| 29 | Ga0081539_10037985 | 3300005985 | Bacteria | 2860 |
| 30 | Ga0075428_100175043 | 3300006844 | Bacteria | 2324 |
| 31 | Ga0105240_10044604 | 3300009093 | Bacteria | 5632 |
| 32 | Ga0105240_10289449 | 3300009093 | Bacteria | 1879 |
| 33 | Ga0105240_10438972 | 3300009093 | Bacteria | 1463 |
| 34 | Ga0111539_10045604 | 3300009094 | Bacteria | 5247 |
| 35 | Ga0105243_10149236 | 3300009148 | Bacteria | 2004 |
| 36 | Ga0105242_10024049 | 3300009176 | Bacteria | 4808 |
| 37 | Ga0105249_10053083 | 3300009553 | Bacteria | 3704 |
| 38 | Ga0099796_10050718 | 3300010159 | Bacteria | 1439 |
| 39 | Ga0105239_10017634 | 3300010375 | Bacteria | 7898 |
| 40 | Ga0157380_10254606 | 3300014326 | Bacteria | 1591 |
| 41 | Ga0182005_1002298 | 3300015265 | Bacteria | 6980 |
| 42 | Ga0163161_10356383 | 3300017792 | Bacteria | 1164 |
| 43 | Ga0207688_10028707 | 3300025901 | Bacteria | 3060 |
| 44 | Ga0207688_10029797 | 3300025901 | Bacteria | 3007 |
| 45 | Ga0207688_10090753 | 3300025901 | Bacteria | 1754 |
| 46 | Ga0207707_10106157 | 3300025912 | Bacteria | 2455 |
| 47 | Ga0207695_10043199 | 3300025913 | Bacteria | 4805 |
| 48 | Ga0207695_10103532 | 3300025913 | Bacteria | 2837 |
| 49 | Ga0207671_10207975 | 3300025914 | Bacteria | 1530 |
| 50 | Ga0207690_10325844 | 3300025932 | Bacteria | 1209 |
| 51 | Ga0207686_10225375 | 3300025934 | Bacteria | 1356 |
| 52 | Ga0207678_10189329 | 3300026067 | Bacteria | 1758 |
| 53 | Ga0207708_10151751 | 3300026075 | Bacteria | 1825 |
| 54 | Ga0207675_100062755 | 3300026118 | Bacteria | 3471 |
| 55 | Ga0265338_10014171 | 3300028800 | Bacteria | 8907 |
| 56 | Ga0265338_10032359 | 3300028800 | Bacteria | 5103 |
| 57 | Ga0265325_10019365 | 3300031241 | Bacteria | 3763 |
| 58 | Ga0265316_10076257 | 3300031344 | Bacteria | 2576 |
| 59 | Ga0265316_10153794 | 3300031344 | Bacteria | 1722 |
| 60 | Ga0265313_10077597 | 3300031595 | Bacteria | 1516 |
| 61 | Ga0265314_10236255 | 3300031711 | Bacteria | 1057 |
| 62 | Ga0307406_10054356 | 3300031901 | Bacteria | 2555 |
| 63 | Ga0307407_10050935 | 3300031903 | Bacteria | 2371 |
| 64 | Ga0307416_100035637 | 3300032002 | Bacteria | 3803 |
| 65 | Ga0307416_100731519 | 3300032002 | Bacteria | 1081 |
| 66 | Ga0307414_10023303 | 3300032004 | Bacteria | 3924 |
| 67 | Ga0307411_10149977 | 3300032005 | Bacteria | 1731 |
| 68 | Ga0373948_0019699 | 3300034817 | Bacteria | 1278 |
| 69 | Ga0373950_0033939 | 3300034818 | Bacteria | 955 |
| 70 | Ga0373956_0020928 | 3300035119 | Bacteria | 2789 |
| 71 | Ga0373960_0126667 | 3300035121 | Bacteria | 852 |
| 72 | Ga0373937_0026202 | 3300036401 | Bacteria | 5268 |
| 73 | Ga0373937_0027569 | 3300036401 | Bacteria | 5137 |
| 74 | Ga0373937_0067580 | 3300036401 | Bacteria | 3293 |
| 75 | Ga0373937_0353620 | 3300036401 | Bacteria | 1392 |
| 76 | Ga0373925_0315017 | 3300037068 | Bacteria | 1265 |
| 77 | Ga0395900_0156570 | 3300037418 | Bacteria | 2327 |
| 78 | Ga0395898_0311428 | 3300037466 | Bacteria | 1502 |
| 79 | Ga0436364_1124246 | 3300037853 | Bacteria | 1278 |
| 80 | Ga0436360_0620096 | 3300039438 | Bacteria | 1282 |
| 81 | Ga0436360_0911024 | 3300039438 | Bacteria | 1676 |
| 82 | Ga0436361_0559220 | 3300039447 | Bacteria | 1325 |
| 83 | Ga0451577_0000181 | 3300042876 | Bacteria | 134503 |
| 84 | Ga0466969_0121742 | 3300044656 | Bacteria | 1214 |
| 85 | Ga0466972_0059028 | 3300044658 | Bacteria | 1842 |
| 86 | Ga0466965_0116159 | 3300044683 | Bacteria | 1379 |
| 87 | Ga0466966_0025269 | 3300044684 | Bacteria | 3880 |
| 88 | Ga0466961_0000044 | 3300044693 | Bacteria | 76071 |
| 89 | Ga0466961_0046800 | 3300044693 | Bacteria | 2766 |
| 90 | Ga0453684_0000592 | 3300044712 | Bacteria | 134503 |
| 91 | Ga0466968_0035898 | 3300044735 | Bacteria | 2075 |
| 92 | Ga0466970_0227731 | 3300044765 | Bacteria | 1041 |
| 93 | Ga0466957_0027949 | 3300044842 | Bacteria | 3355 |
| 94 | Ga0466959_0136742 | 3300045049 | Bacteria | 1734 |
| 95 | Ga0495629_0004583 | 3300046459 | Bacteria | 10338 |
| 96 | Ga0495651_0034257 | 3300046462 | Bacteria | 3958 |
| 97 | Ga0495651_0129059 | 3300046462 | Bacteria | 1848 |
| 98 | Ga0495662_0039994 | 3300046476 | Bacteria | 2265 |
| 99 | Ga0495652_0046250 | 3300046529 | Bacteria | 3737 |
| 100 | Ga0495640_0038994 | 3300046533 | Bacteria | 3337 |
| 101 | Ga0495640_0076023 | 3300046533 | Bacteria | 2241 |
| 102 | Ga0495634_0026395 | 3300046642 | Bacteria | 4054 |
| 103 | Ga0495635_0002607 | 3300046663 | Bacteria | 12348 |
| 104 | Ga0495588_0083163 | 3300046674 | Bacteria | 1672 |
| 105 | Ga0495657_0005453 | 3300046675 | Bacteria | 10072 |
| 106 | Ga0495646_0067689 | 3300046680 | Bacteria | 2110 |
| 107 | Ga0495613_0089483 | 3300046689 | Bacteria | 2230 |
| 108 | Ga0495624_0016617 | 3300046690 | Bacteria | 4952 |
| 109 | Ga0495589_0050062 | 3300046794 | Bacteria | 2067 |
| 110 | Ga0495600_0032071 | 3300046809 | Bacteria | 3408 |
| 111 | Ga0495604_0017330 | 3300047317 | Bacteria | 5764 |
| 112 | Ga0495676_0018812 | 3300047321 | Bacteria | 6089 |
| 113 | Ga0495593_0101538 | 3300047673 | Bacteria | 1475 |
| 114 | Ga0495602_0137416 | 3300048088 | Bacteria | 1939 |
| 115 | Ga0495602_0391468 | 3300048088 | Bacteria | 993 |
| 116 | Ga0496102_0086348 | 3300048905 | Bacteria | 2898 |
| 117 | Ga0496104_0002605 | 3300048907 | Bacteria | 15534 |
| 118 | Ga0496105_0001326 | 3300048908 | Bacteria | 17323 |
| 119 | Ga0496115_0295594 | 3300048918 | Bacteria | 1327 |
| 120 | Ga0496119_0013796 | 3300048922 | Bacteria | 6392 |
| 121 | Ga0496120_0006693 | 3300048923 | Bacteria | 8774 |
| 122 | Ga0496125_0053581 | 3300048928 | Bacteria | 3305 |
| 123 | Ga0501031_0243672 | 3300049568 | Bacteria | 1168 |
| 124 | Ga0501034_0122306 | 3300049571 | Bacteria | 2589 |
| 125 | Ga0501036_0205223 | 3300049572 | Bacteria | 1657 |
| 126 | Ga0501041_0234833 | 3300049577 | Bacteria | 1152 |
| 127 | Ga0501042_0200855 | 3300049578 | Bacteria | 1437 |
| 128 | Ga0501047_0091871 | 3300049581 | Bacteria | 2914 |
| 129 | Ga0501070_0019066 | 3300049586 | Bacteria | 5755 |
| 130 | Ga0501071_0261147 | 3300049587 | Bacteria | 1308 |
| 131 | Ga0501075_0356089 | 3300049591 | Bacteria | 1115 |
| 132 | Ga0501076_0221777 | 3300049592 | Bacteria | 1545 |
| 133 | Ga0501045_0013468 | 3300049824 | Bacteria | 5776 |
| 134 | nmdc:mga06r32_270830_c1 | 3300050510 | Bacteria | 1685 |
| 135 | nmdc:mga08y16_37276_c1 | 3300050511 | Bacteria | 5107 |
| 136 | Ga0495619_0387672 | 3300053085 | Bacteria | 965 |
| 137 | Ga0500593_001221 | 3300053117 | Bacteria | 9296 |
| 138 | Ga0500594_0044426 | 3300053118 | Bacteria | 1229 |
| 139 | Ga0500559_0041592 | 3300053136 | Bacteria | 2003 |
| 140 | Ga0501082_0122130 | 3300060353 | Bacteria | 2258 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049568 | Ga0501031_0243672 | Ga0501031_0243672_386_1129 | 243 |
| 2 | 3300028800 | Ga0265338_10014171 | Ga0265338_100141713 | 245 |
| 3 | 3300005937 | Ga0081455_10360798 | Ga0081455_103607981 | 247 |
| 4 | 3300028800 | Ga0265338_10032359 | Ga0265338_100323592 | 247 |
| 5 | 3300046533 | Ga0495640_0038994 | Ga0495640_0038994_82_831 | 247 |
| 6 | 3300048088 | Ga0495602_0391468 | Ga0495602_0391468_180_977 | 247 |
| 7 | 3300036401 | Ga0373937_0067580 | Ga0373937_0067580_1890_2753 | 248 |
| 8 | 3300009093 | Ga0105240_10289449 | Ga0105240_102894492 | 249 |
| 9 | 3300025913 | Ga0207695_10043199 | Ga0207695_100431993 | 249 |
| 10 | 3300044765 | Ga0466970_0227731 | Ga0466970_0227731_177_1016 | 253 |
| 11 | 3300037853 | Ga0436364_1124246 | Ga0436364_1124246_320_1159 | 254 |
| 12 | 3300025901 | Ga0207688_10028707 | Ga0207688_100287073 | 257 |
| 13 | 3300025914 | Ga0207671_10207975 | Ga0207671_102079752 | 257 |
| 14 | 3300031344 | Ga0265316_10076257 | Ga0265316_100762572 | 257 |
| 15 | 3300005436 | Ga0070713_100047058 | Ga0070713_1000470582 | 259 |
| 16 | 3300031901 | Ga0307406_10054356 | Ga0307406_100543562 | 259 |
| 17 | 3300032002 | Ga0307416_100035637 | Ga0307416_1000356373 | 259 |
| 18 | 3300032004 | Ga0307414_10023303 | Ga0307414_100233032 | 259 |
| 19 | 3300032005 | Ga0307411_10149977 | Ga0307411_101499772 | 259 |
| 20 | 3300044658 | Ga0466972_0059028 | Ga0466972_0059028_363_1259 | 259 |
| 21 | 3300005444 | Ga0070694_100214425 | Ga0070694_1002144252 | 260 |
| 22 | 3300031903 | Ga0307407_10050935 | Ga0307407_100509352 | 262 |
| 23 | 3300036401 | Ga0373937_0353620 | Ga0373937_0353620_173_1015 | 262 |
| 24 | 3300005441 | Ga0070700_100364077 | Ga0070700_1003640772 | 263 |
| 25 | 3300034818 | Ga0373950_0033939 | Ga0373950_0033939_22_819 | 263 |
| 26 | 3300005336 | Ga0070680_100012861 | Ga0070680_1000128613 | 264 |
| 27 | 3300005345 | Ga0070692_10027694 | Ga0070692_100276943 | 264 |
| 28 | 3300005406 | Ga0070703_10005029 | Ga0070703_100050292 | 264 |
| 29 | 3300005440 | Ga0070705_100000435 | Ga0070705_10000043523 | 264 |
| 30 | 3300005441 | Ga0070700_100020649 | Ga0070700_1000206493 | 264 |
| 31 | 3300005444 | Ga0070694_100001961 | Ga0070694_1000019618 | 264 |
| 32 | 3300005455 | Ga0070663_100013743 | Ga0070663_1000137434 | 264 |
| 33 | 3300005467 | Ga0070706_100100157 | Ga0070706_1001001571 | 264 |
| 34 | 3300005518 | Ga0070699_100012836 | Ga0070699_1000128362 | 264 |
| 35 | 3300005530 | Ga0070679_100105925 | Ga0070679_1001059251 | 264 |
| 36 | 3300005536 | Ga0070697_100041538 | Ga0070697_1000415384 | 264 |
| 37 | 3300005539 | Ga0068853_100426119 | Ga0068853_1004261192 | 264 |
| 38 | 3300005545 | Ga0070695_100021946 | Ga0070695_1000219463 | 264 |
| 39 | 3300005546 | Ga0070696_100000223 | Ga0070696_1000002235 | 264 |
| 40 | 3300005549 | Ga0070704_100057682 | Ga0070704_1000576823 | 264 |
| 41 | 3300005577 | Ga0068857_100004310 | Ga0068857_1000043102 | 264 |
| 42 | 3300005937 | Ga0081455_10003311 | Ga0081455_100033117 | 264 |
| 43 | 3300006844 | Ga0075428_100175043 | Ga0075428_1001750432 | 264 |
| 44 | 3300009094 | Ga0111539_10045604 | Ga0111539_100456042 | 264 |
| 45 | 3300026067 | Ga0207678_10189329 | Ga0207678_101893292 | 264 |
| 46 | 3300044684 | Ga0466966_0025269 | Ga0466966_0025269_2450_3295 | 264 |
| 47 | 3300044693 | Ga0466961_0000044 | Ga0466961_0000044_73624_74469 | 264 |
| 48 | 3300046459 | Ga0495629_0004583 | Ga0495629_0004583_8949_9794 | 264 |
| 49 | 3300046462 | Ga0495651_0034257 | Ga0495651_0034257_1350_2195 | 264 |
| 50 | 3300046476 | Ga0495662_0039994 | Ga0495662_0039994_234_1079 | 264 |
| 51 | 3300046529 | Ga0495652_0046250 | Ga0495652_0046250_2205_3050 | 264 |
| 52 | 3300046533 | Ga0495640_0076023 | Ga0495640_0076023_128_973 | 264 |
| 53 | 3300046642 | Ga0495634_0026395 | Ga0495634_0026395_1321_2166 | 264 |
| 54 | 3300046663 | Ga0495635_0002607 | Ga0495635_0002607_4552_5397 | 264 |
| 55 | 3300046674 | Ga0495588_0083163 | Ga0495588_0083163_258_1103 | 264 |
| 56 | 3300046675 | Ga0495657_0005453 | Ga0495657_0005453_150_995 | 264 |
| 57 | 3300046680 | Ga0495646_0067689 | Ga0495646_0067689_570_1415 | 264 |
| 58 | 3300046689 | Ga0495613_0089483 | Ga0495613_0089483_1267_2112 | 264 |
| 59 | 3300046690 | Ga0495624_0016617 | Ga0495624_0016617_3602_4447 | 264 |
| 60 | 3300046809 | Ga0495600_0032071 | Ga0495600_0032071_1565_2410 | 264 |
| 61 | 3300047317 | Ga0495604_0017330 | Ga0495604_0017330_3603_4448 | 264 |
| 62 | 3300047321 | Ga0495676_0018812 | Ga0495676_0018812_4675_5520 | 264 |
| 63 | 3300047673 | Ga0495593_0101538 | Ga0495593_0101538_414_1259 | 264 |
| 64 | 3300048088 | Ga0495602_0137416 | Ga0495602_0137416_615_1460 | 264 |
| 65 | 3300048907 | Ga0496104_0002605 | Ga0496104_0002605_5652_6497 | 264 |
| 66 | 3300048908 | Ga0496105_0001326 | Ga0496105_0001326_12449_13294 | 264 |
| 67 | 3300048918 | Ga0496115_0295594 | Ga0496115_0295594_430_1275 | 264 |
| 68 | 3300048922 | Ga0496119_0013796 | Ga0496119_0013796_4088_4933 | 264 |
| 69 | 3300048923 | Ga0496120_0006693 | Ga0496120_0006693_4632_5477 | 264 |
| 70 | 3300048928 | Ga0496125_0053581 | Ga0496125_0053581_1736_2581 | 264 |
| 71 | 3300050510 | nmdc:mga06r32_270830_c1 | nmdc:mga06r32_270830_c1_651_1496 | 264 |
| 72 | 3300050511 | nmdc:mga08y16_37276_c1 | nmdc:mga08y16_37276_c1_3196_4041 | 264 |
| 73 | 3300053085 | Ga0495619_0387672 | Ga0495619_0387672_104_949 | 264 |
| 74 | 3300053136 | Ga0500559_0041592 | Ga0500559_0041592_731_1576 | 264 |
| 75 | 3300060353 | Ga0501082_0122130 | Ga0501082_0122130_1349_2200 | 264 |
| 76 | 3300010159 | Ga0099796_10050718 | Ga0099796_100507182 | 265 |
| 77 | 3300031344 | Ga0265316_10153794 | Ga0265316_101537942 | 265 |
| 78 | 3300035121 | Ga0373960_0126667 | Ga0373960_0126667_28_831 | 265 |
| 79 | 3300036401 | Ga0373937_0027569 | Ga0373937_0027569_2563_3426 | 265 |
| 80 | 3300044735 | Ga0466968_0035898 | Ga0466968_0035898_302_1192 | 265 |
| 81 | 3300046462 | Ga0495651_0129059 | Ga0495651_0129059_108_971 | 265 |
| 82 | 3300049586 | Ga0501070_0019066 | Ga0501070_0019066_1223_2071 | 265 |
| 83 | 3300017792 | Ga0163161_10356383 | Ga0163161_103563832 | 266 |
| 84 | 3300037068 | Ga0373925_0315017 | Ga0373925_0315017_177_1019 | 266 |
| 85 | 3300015265 | Ga0182005_1002298 | Ga0182005_10022984 | 267 |
| 86 | 3300009093 | Ga0105240_10438972 | Ga0105240_104389722 | 269 |
| 87 | 3300049571 | Ga0501034_0122306 | Ga0501034_0122306_649_1530 | 270 |
| 88 | 3300049581 | Ga0501047_0091871 | Ga0501047_0091871_701_1582 | 270 |
| 89 | 3300025932 | Ga0207690_10325844 | Ga0207690_103258442 | 271 |
| 90 | 3300039438 | Ga0436360_0620096 | Ga0436360_0620096_378_1235 | 271 |
| 91 | 3300045049 | Ga0466959_0136742 | Ga0466959_0136742_644_1495 | 271 |
| 92 | 3300009093 | Ga0105240_10044604 | Ga0105240_100446045 | 272 |
| 93 | 3300025913 | Ga0207695_10103532 | Ga0207695_101035322 | 272 |
| 94 | 3300044656 | Ga0466969_0121742 | Ga0466969_0121742_285_1163 | 272 |
| 95 | 3300044693 | Ga0466961_0046800 | Ga0466961_0046800_1433_2311 | 272 |
| 96 | 3300010375 | Ga0105239_10017634 | Ga0105239_100176348 | 273 |
| 97 | 3300031241 | Ga0265325_10019365 | Ga0265325_100193654 | 274 |
| 98 | 3300031595 | Ga0265313_10077597 | Ga0265313_100775972 | 274 |
| 99 | 3300031711 | Ga0265314_10236255 | Ga0265314_102362552 | 274 |
| 100 | 3300005437 | Ga0070710_10003608 | Ga0070710_100036082 | 277 |
| 101 | 3300005458 | Ga0070681_10292756 | Ga0070681_102927562 | 277 |
| 102 | 3300025912 | Ga0207707_10106157 | Ga0207707_101061572 | 277 |
| 103 | 3300039438 | Ga0436360_0911024 | Ga0436360_0911024_676_1533 | 277 |
| 104 | 3300039447 | Ga0436361_0559220 | Ga0436361_0559220_180_1037 | 277 |
| 105 | 3300005367 | Ga0070667_100000212 | Ga0070667_10000021245 | 278 |
| 106 | 3300032002 | Ga0307416_100731519 | Ga0307416_1007315192 | 278 |
| 107 | 3300035119 | Ga0373956_0020928 | Ga0373956_0020928_754_1599 | 278 |
| 108 | 3300036401 | Ga0373937_0026202 | Ga0373937_0026202_3117_3962 | 278 |
| 109 | 3300042876 | Ga0451577_0000181 | Ga0451577_0000181_4062_4910 | 278 |
| 110 | 3300044712 | Ga0453684_0000592 | Ga0453684_0000592_129594_130442 | 278 |
| 111 | 3300005328 | Ga0070676_10112865 | Ga0070676_101128652 | 279 |
| 112 | 3300034817 | Ga0373948_0019699 | Ga0373948_0019699_12_857 | 279 |
| 113 | 3300049591 | Ga0501075_0356089 | Ga0501075_0356089_31_876 | 279 |
| 114 | 3300009176 | Ga0105242_10024049 | Ga0105242_100240494 | 280 |
| 115 | 3300025934 | Ga0207686_10225375 | Ga0207686_102253752 | 280 |
| 116 | 3300005327 | Ga0070658_10332262 | Ga0070658_103322622 | 281 |
| 117 | 3300005456 | Ga0070678_100375623 | Ga0070678_1003756231 | 281 |
| 118 | 3300005457 | Ga0070662_100337139 | Ga0070662_1003371392 | 281 |
| 119 | 3300005985 | Ga0081539_10037985 | Ga0081539_100379853 | 281 |
| 120 | 3300009148 | Ga0105243_10149236 | Ga0105243_101492362 | 281 |
| 121 | 3300009553 | Ga0105249_10053083 | Ga0105249_100530835 | 281 |
| 122 | 3300014326 | Ga0157380_10254606 | Ga0157380_102546062 | 281 |
| 123 | 3300025901 | Ga0207688_10029797 | Ga0207688_100297973 | 281 |
| 124 | 3300025901 | Ga0207688_10090753 | Ga0207688_100907532 | 281 |
| 125 | 3300026075 | Ga0207708_10151751 | Ga0207708_101517512 | 281 |
| 126 | 3300026118 | Ga0207675_100062755 | Ga0207675_1000627554 | 281 |
| 127 | 3300037418 | Ga0395900_0156570 | Ga0395900_0156570_236_1126 | 281 |
| 128 | 3300037466 | Ga0395898_0311428 | Ga0395898_0311428_447_1337 | 281 |
| 129 | 3300044683 | Ga0466965_0116159 | Ga0466965_0116159_36_926 | 281 |
| 130 | 3300044842 | Ga0466957_0027949 | Ga0466957_0027949_1689_2576 | 281 |
| 131 | 3300046794 | Ga0495589_0050062 | Ga0495589_0050062_1110_1979 | 281 |
| 132 | 3300048905 | Ga0496102_0086348 | Ga0496102_0086348_1549_2421 | 281 |
| 133 | 3300049572 | Ga0501036_0205223 | Ga0501036_0205223_84_980 | 281 |
| 134 | 3300049577 | Ga0501041_0234833 | Ga0501041_0234833_180_1076 | 281 |
| 135 | 3300049578 | Ga0501042_0200855 | Ga0501042_0200855_61_957 | 281 |
| 136 | 3300049587 | Ga0501071_0261147 | Ga0501071_0261147_182_1078 | 281 |
| 137 | 3300049592 | Ga0501076_0221777 | Ga0501076_0221777_513_1409 | 281 |
| 138 | 3300049824 | Ga0501045_0013468 | Ga0501045_0013468_2754_3650 | 281 |
| 139 | 3300053117 | Ga0500593_001221 | Ga0500593_001221_6976_7857 | 281 |
| 140 | 3300053118 | Ga0500594_0044426 | Ga0500594_0044426_122_1000 | 281 |
| 141 | iso_pu_bacteria | 2508501050 | 2508725184 | 281 |
| 142 | iso_pu_bacteria | 2508501114 | 2509077391 | 281 |
| 143 | iso_pu_bacteria | 2545555834 | 2545678654 | 281 |
| 144 | iso_pu_bacteria | 2595698237 | 2596374178 | 281 |
| 145 | iso_pu_bacteria | 2738541281 | 2738744410 | 281 |
| 146 | iso_pu_bacteria | 2738543032 | 2739353640 | 281 |
| 147 | iso_pu_bacteria | 2773857925 | 2774870845 | 281 |
| 148 | iso_pu_bacteria | 2775506901 | 2776262095 | 281 |
| 149 | iso_pu_bacteria | 2829745981 | 2829748430 | 281 |
| 150 | iso_pu_bacteria | 2835312727 | 2835317431 | 281 |
| 151 | iso_pu_bacteria | 2842698319 | 2842702385 | 281 |
| 152 | iso_pu_bacteria | 2861691609 | 2861692780 | 281 |
| 153 | iso_pu_bacteria | 2882456835 | 2882459630 | 281 |
| 154 | iso_pu_bacteria | 2884298095 | 2884298991 | 281 |
| 155 | iso_pu_bacteria | 2889306138 | 2889307134 | 281 |
| 156 | iso_pu_bacteria | 2894232714 | 2894238218 | 281 |
| 157 | iso_pu_bacteria | 2894232714 | 2894239103 | 281 |
| 158 | iso_pu_bacteria | 2902330777 | 2902333032 | 281 |
| 159 | iso_pu_bacteria | 2902405164 | 2902411927 | 281 |
| 160 | iso_pu_bacteria | 2928125067 | 2928129764 | 281 |
| 161 | iso_pu_bacteria | 2939669807 | 2939672572 | 281 |
| 162 | iso_pu_bacteria | 3003665799 | 3003667241 | 281 |
| 163 | iso_pu_bacteria | 641522639 | 641646774 | 281 |
| 164 | iso_pu_bacteria | 643348564 | 643604980 | 281 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF00528
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
108
304
0.83
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7ahc-assembly1.cif.gz_B | opua apo inward-facing | 0.8476 | 69 | 274 |
| 3tui-assembly2.cif.gz_E | inward facing conformations of the metni methionine abc transporter: cy5 native crystal form | 0.8194 | 66 | 276 |
| 3dhw-assembly1.cif.gz_B | crystal structure of methionine importer metni | 0.8182 | 66 | 273 |
| 3dhw-assembly2.cif.gz_F | crystal structure of methionine importer metni | 0.8053 | 66 | 273 |
| 7ahh-assembly1.cif.gz_B | opua inhibited inward-facing, sbd docked | 0.8023 | 74 | 278 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P07654_38_293_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9876 | 28 | 280 | 1.10.3720.10 |
| af_P07654_38_293_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9724 | 28 | 280 | 1.10.3720.10 |
| af_P9WG11_24_299_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.954 | 10 | 276 | 1.10.3720.10 |
| af_P9WG09_26_296_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9373 | 12 | 276 | 1.10.3720.10 |
| af_Q2FYP8_79_307_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.9264 | 68 | 279 | 1.10.3720.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A259RXF3-F1-model_v4 | Phosphate transport system permease protein PstA | 0.9951 | 24 | 264 |
GO:0005315
GO:0005886 GO:0035435 |
| AF-A0A7W4P561-F1-model_v4 | Phosphate transport system permease protein PstA | 0.9941 | 8 | 254 |
GO:0005315
GO:0005886 GO:0035435 |
| AF-E5AP50-F1-model_v4 | Phosphate transport system permease protein PstA | 0.991 | 6 | 279 |
GO:0005315
GO:0005886 GO:0035435 |
| AF-D5WA66-F1-model_v4 | Phosphate transport system permease protein PstA | 0.9907 | 6 | 280 |
GO:0005315
GO:0005886 GO:0035435 |
| AF-A0A3B0JBI8-F1-model_v4 | Phosphate transport system permease protein PstA | 0.9901 | 25 | 281 |
GO:0005315
GO:0005886 GO:0035435 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar