F244507

General Info

Members Datasets Scaffolds Average Seq Length
164 114 328 306

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0647168|Ga0453684_0647168_113_1084
Length 323
Sequence VTAEAGAPLRVAVIGAGGVGGYLGSRLTAGGADVSYVARGPHLAALRERGLTIVAADGASTTTPVLATAEPADIGPVELVVFTVKSYDTESAARTLPPLIGPETAVVSLQNGIDNEAKIGAIVGGEHVLGGAAYILASIQAPGVIRSGPARIVVGELVPGPPSERVRRIVAAATAGGVGAAAAEDVRVAKWEKYVLLVAFAAVSAGTQLPLGDIRRSEAAVAMLRAIATEAWTVGRALGVPLRDGLVEERVSLVLQQADDEGTSLRHDLLHGRRMEVEALQGTLSRLGRETGVPTPWTDAAYAVLQPWALRNERESHRVPAGP

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
64 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
75 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
97 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 10.98
Rhizosphere 89.02
Stem 0
Stem Tuber 0
Unclassified 5.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0647168 3300044712 Bacteria 1154
2 Ga0070683_100229676 3300005329 Bacteria 1764
3 Ga0070680_100000001 3300005336 Bacteria 276263
4 Ga0070680_100065845 3300005336 Bacteria 2970
5 Ga0068868_100076335 3300005338 Bacteria 2679
6 Ga0070669_100013782 3300005353 Bacteria 5746
7 Ga0070674_100096550 3300005356 Bacteria 2145
8 Ga0070705_100005787 3300005440 Bacteria 6044
9 Ga0070694_100047588 3300005444 Bacteria 2883
10 Ga0070694_100147120 3300005444 Bacteria 1717
11 Ga0070708_100002597 3300005445 Bacteria 13966
12 Ga0070708_100040623 3300005445 Bacteria 4074
13 Ga0070708_100165795 3300005445 Bacteria 2061
14 Ga0070708_100288431 3300005445 Unclassified 1545
15 Ga0070663_100265314 3300005455 Bacteria 1363
16 Ga0070678_100112090 3300005456 Bacteria 2136
17 Ga0070706_100030226 3300005467 Bacteria 4990
18 Ga0070707_100054543 3300005468 Bacteria 3832
19 Ga0070707_100214820 3300005468 Bacteria 1874
20 Ga0070698_100154068 3300005471 Bacteria 2244
21 Ga0070698_100165389 3300005471 Bacteria 2155
22 Ga0070698_100278359 3300005471 Bacteria 1605
23 Ga0070698_100331848 3300005471 Bacteria 1452
24 Ga0070699_100011138 3300005518 Bacteria 7772
25 Ga0070699_100019469 3300005518 Bacteria 5845
26 Ga0070699_100077955 3300005518 Bacteria 2885
27 Ga0070699_100081696 3300005518 Bacteria 2817
28 Ga0070699_100221956 3300005518 Bacteria 1684
29 Ga0070697_100028091 3300005536 Bacteria 4503
30 Ga0070695_100190133 3300005545 Bacteria 1460
31 Ga0070696_100008622 3300005546 Bacteria 6820
32 Ga0070696_100289672 3300005546 Unclassified 1251
33 Ga0070704_100090366 3300005549 Bacteria 2281
34 Ga0070704_100112320 3300005549 Bacteria 2076
35 Ga0070704_100114036 3300005549 Bacteria 2062
36 Ga0070702_100287935 3300005615 Bacteria 1131
37 Ga0068870_10043202 3300005840 Bacteria 2350
38 Ga0081455_10018643 3300005937 Bacteria 6596
39 Ga0081539_10001961 3300005985 Bacteria 31358
40 Ga0075428_100000350 3300006844 Bacteria 45826
41 Ga0075428_100054161 3300006844 Bacteria 4396
42 Ga0075430_100000008 3300006846 Bacteria 101688
43 Ga0075430_100009318 3300006846 Bacteria 8298
44 Ga0075431_100000289 3300006847 Bacteria 39402
45 Ga0075431_100519127 3300006847 Bacteria 1181
46 Ga0075433_10008849 3300006852 Bacteria 8031
47 Ga0075433_10480104 3300006852 Bacteria 1095
48 Ga0075434_100246370 3300006871 Unclassified 1806
49 Ga0075429_100000111 3300006880 Bacteria 46835
50 Ga0097620_100824148 3300006931 Bacteria 1015
51 Ga0075435_100025486 3300007076 Bacteria 4604
52 Ga0099794_10108525 3300007265 Bacteria 1389
53 Ga0111539_10086646 3300009094 Bacteria 3680
54 Ga0105245_10526876 3300009098 Unclassified 1201
55 Ga0114129_10021526 3300009147 Bacteria 9153
56 Ga0114129_10029210 3300009147 Bacteria 7809
57 Ga0114129_10086223 3300009147 Bacteria 4355
58 Ga0114129_10094125 3300009147 Bacteria 4149
59 Ga0114129_10306976 3300009147 Bacteria 2113
60 Ga0105243_10066264 3300009148 Bacteria 2904
61 Ga0105243_10462641 3300009148 Bacteria 1193
62 Ga0105242_10240372 3300009176 Bacteria 1627
63 Ga0105249_10330360 3300009553 Bacteria 1538
64 Ga0105246_10102447 3300011119 Bacteria 2087
65 Ga0157375_10353769 3300013308 Bacteria 1635
66 Ga0157380_10579026 3300014326 Bacteria 1106
67 Ga0157380_10640418 3300014326 Bacteria 1058
68 Ga0157376_10330346 3300014969 Bacteria 1453
69 Ga0207688_10213269 3300025901 Bacteria 1161
70 Ga0207707_10021596 3300025912 Bacteria 5625
71 Ga0207660_10000001 3300025917 Bacteria 1034169
72 Ga0207662_10046145 3300025918 Bacteria 2577
73 Ga0207646_10059425 3300025922 Bacteria 3415
74 Ga0207646_10208053 3300025922 Bacteria 1767
75 Ga0207706_10205099 3300025933 Bacteria 1729
76 Ga0207709_10284610 3300025935 Bacteria 1222
77 Ga0207689_10093558 3300025942 Bacteria 2469
78 Ga0207640_10249778 3300025981 Bacteria 1376
79 Ga0207658_10367281 3300025986 Bacteria 1257
80 Ga0207677_10521483 3300026023 Unclassified 1031
81 Ga0207708_10002238 3300026075 Bacteria 14261
82 Ga0207648_10175488 3300026089 Bacteria 1895
83 Ga0207676_10236116 3300026095 Bacteria 1637
84 Ga0207683_10151579 3300026121 Bacteria 2092
85 Ga0207428_10053906 3300027907 Bacteria 3205
86 Ga0268264_10446893 3300028381 Bacteria 1252
87 Ga0307408_100014928 3300031548 Bacteria 5168
88 Ga0307408_100262103 3300031548 Bacteria 1431
89 Ga0307409_100420318 3300031995 Bacteria 1282
90 Ga0307416_100007375 3300032002 Bacteria 6988
91 Ga0373961_0097177 3300035241 Bacteria 949
92 Ga0373931_0000493 3300035691 Bacteria 16106
93 Ga0373931_0227705 3300035691 Bacteria 1125
94 Ga0373947_0157288 3300035725 Unclassified 1468
95 Ga0395899_0206534 3300037312 Bacteria 1367
96 Ga0395900_0117029 3300037418 Bacteria 2735
97 Ga0395900_0195229 3300037418 Bacteria 2051
98 Ga0395900_0535901 3300037418 Bacteria 1117
99 Ga0395898_0013471 3300037466 Bacteria 8420
100 Ga0395898_0067969 3300037466 Bacteria 3449
101 Ga0395905_0024225 3300037471 Bacteria 5729
102 Ga0395905_0170537 3300037471 Bacteria 2044
103 Ga0395901_0002653 3300038443 Bacteria 18080
104 Ga0451577_0023560 3300042876 Bacteria 5613
105 Ga0466969_0001111 3300044656 Bacteria 14499
106 Ga0466966_0001251 3300044684 Bacteria 16268
107 Ga0466964_0003296 3300044706 Bacteria 5878
108 Ga0466968_0000135 3300044735 Bacteria 21763
109 Ga0466970_0000719 3300044765 Bacteria 16198
110 Ga0466959_0016048 3300045049 Bacteria 5467
111 Ga0466967_0099603 3300045976 Unclassified 2655
112 Ga0495676_0223435 3300047321 Unclassified 1297
113 Ga0496102_0169931 3300048905 Bacteria 2053
114 Ga0496103_0071964 3300048906 Bacteria 2165
115 Ga0496104_0006533 3300048907 Bacteria 10252
116 Ga0496104_0209703 3300048907 Bacteria 1860
117 Ga0496105_0004071 3300048908 Bacteria 10943
118 Ga0496105_0272353 3300048908 Bacteria 1367
119 Ga0496108_0052744 3300048911 Bacteria 3409
120 Ga0496108_0066186 3300048911 Bacteria 3047
121 Ga0496108_0139594 3300048911 Bacteria 2088
122 Ga0496109_0021074 3300048912 Bacteria 5763
123 Ga0496109_0262420 3300048912 Unclassified 1627
124 Ga0496109_0466293 3300048912 Bacteria 1193
125 Ga0496110_0003261 3300048913 Bacteria 12371
126 Ga0496112_0000005 3300048915 Bacteria 525541
127 Ga0496112_0031661 3300048915 Bacteria 5131
128 Ga0496112_0217067 3300048915 Bacteria 1869
129 Ga0496113_0002777 3300048916 Bacteria 10300
130 Ga0496114_0079234 3300048917 Bacteria 2772
131 Ga0501038_0065441 3300049574 Bacteria 3097
132 Ga0501039_0152587 3300049575 Bacteria 1815
133 Ga0501040_0269495 3300049576 Bacteria 1216
134 Ga0501041_0233823 3300049577 Bacteria 1154
135 Ga0501046_0111517 3300049580 Bacteria 2089
136 Ga0501048_0347635 3300049582 Bacteria 1057
137 Ga0501068_0004520 3300049584 Bacteria 7572
138 Ga0501072_0003363 3300049588 Bacteria 12023
139 Ga0501072_0005593 3300049588 Bacteria 9564
140 Ga0501072_0057483 3300049588 Bacteria 3066
141 Ga0501072_0251930 3300049588 Bacteria 1406
142 Ga0501074_0243139 3300049590 Bacteria 1280
143 Ga0501075_0031979 3300049591 Bacteria 3908
144 Ga0501075_0304089 3300049591 Bacteria 1215
145 Ga0501077_0069444 3300049593 Bacteria 2233
146 Ga0501079_0159183 3300049741 Bacteria 1760
147 Ga0501081_0008942 3300049743 Bacteria 6510
148 Ga0501081_0107691 3300049743 Bacteria 1976
149 Ga0501045_0254779 3300049824 Bacteria 1306
150 nmdc:mga05p37_3572_c1 3300050507 Bacteria 18167
151 nmdc:mga05p37_504626_c1 3300050507 Bacteria 1387
152 nmdc:mga05p37_637_c1 3300050507 Bacteria 38821
153 nmdc:mga09592_489_c1 3300050508 Bacteria 29678
154 nmdc:mga0qj67_10200_c1 3300050509 Bacteria 7014
155 nmdc:mga06r32_251712_c1 3300050510 Bacteria 1754
156 nmdc:mga06r32_401931_c1 3300050510 Bacteria 1352
157 nmdc:mga08y16_141420_c1 3300050511 Bacteria 2502
158 nmdc:mga0n895_50470_c1 3300050512 Bacteria 4078
159 nmdc:mga0rr50_103889_c1 3300050513 Bacteria 2237
160 nmdc:mga0a205_82051_c1 3300050515 Bacteria 2656
161 Ga0501084_0048956 3300054114 Bacteria 3537
162 Ga0501084_0302819 3300054114 Bacteria 1350
163 Ga0466962_0096601 3300061719 Bacteria 1417
164 Ga0530510_0115798 3300061734 Bacteria 1965
165 Ga0453684_0647168
166 Ga0070683_100229676
167 Ga0070680_100000001
168 Ga0070680_100065845
169 Ga0068868_100076335
170 Ga0070669_100013782
171 Ga0070674_100096550
172 Ga0070705_100005787
173 Ga0070694_100047588
174 Ga0070694_100147120
175 Ga0070708_100002597
176 Ga0070708_100040623
177 Ga0070708_100165795
178 Ga0070708_100288431
179 Ga0070663_100265314
180 Ga0070678_100112090
181 Ga0070706_100030226
182 Ga0070707_100054543
183 Ga0070707_100214820
184 Ga0070698_100154068
185 Ga0070698_100165389
186 Ga0070698_100278359
187 Ga0070698_100331848
188 Ga0070699_100011138
189 Ga0070699_100019469
190 Ga0070699_100077955
191 Ga0070699_100081696
192 Ga0070699_100221956
193 Ga0070697_100028091
194 Ga0070695_100190133
195 Ga0070696_100008622
196 Ga0070696_100289672
197 Ga0070704_100090366
198 Ga0070704_100112320
199 Ga0070704_100114036
200 Ga0070702_100287935
201 Ga0068870_10043202
202 Ga0081455_10018643
203 Ga0081539_10001961
204 Ga0075428_100000350
205 Ga0075428_100054161
206 Ga0075430_100000008
207 Ga0075430_100009318
208 Ga0075431_100000289
209 Ga0075431_100519127
210 Ga0075433_10008849
211 Ga0075433_10480104
212 Ga0075434_100246370
213 Ga0075429_100000111
214 Ga0097620_100824148
215 Ga0075435_100025486
216 Ga0099794_10108525
217 Ga0111539_10086646
218 Ga0105245_10526876
219 Ga0114129_10021526
220 Ga0114129_10029210
221 Ga0114129_10086223
222 Ga0114129_10094125
223 Ga0114129_10306976
224 Ga0105243_10066264
225 Ga0105243_10462641
226 Ga0105242_10240372
227 Ga0105249_10330360
228 Ga0105246_10102447
229 Ga0157375_10353769
230 Ga0157380_10579026
231 Ga0157380_10640418
232 Ga0157376_10330346
233 Ga0207688_10213269
234 Ga0207707_10021596
235 Ga0207660_10000001
236 Ga0207662_10046145
237 Ga0207646_10059425
238 Ga0207646_10208053
239 Ga0207706_10205099
240 Ga0207709_10284610
241 Ga0207689_10093558
242 Ga0207640_10249778
243 Ga0207658_10367281
244 Ga0207677_10521483
245 Ga0207708_10002238
246 Ga0207648_10175488
247 Ga0207676_10236116
248 Ga0207683_10151579
249 Ga0207428_10053906
250 Ga0268264_10446893
251 Ga0307408_100014928
252 Ga0307408_100262103
253 Ga0307409_100420318
254 Ga0307416_100007375
255 Ga0373961_0097177
256 Ga0373931_0000493
257 Ga0373931_0227705
258 Ga0373947_0157288
259 Ga0395899_0206534
260 Ga0395900_0117029
261 Ga0395900_0195229
262 Ga0395900_0535901
263 Ga0395898_0013471
264 Ga0395898_0067969
265 Ga0395905_0024225
266 Ga0395905_0170537
267 Ga0395901_0002653
268 Ga0451577_0023560
269 Ga0466969_0001111
270 Ga0466966_0001251
271 Ga0466964_0003296
272 Ga0466968_0000135
273 Ga0466970_0000719
274 Ga0466959_0016048
275 Ga0466967_0099603
276 Ga0495676_0223435
277 Ga0496102_0169931
278 Ga0496103_0071964
279 Ga0496104_0006533
280 Ga0496104_0209703
281 Ga0496105_0004071
282 Ga0496105_0272353
283 Ga0496108_0052744
284 Ga0496108_0066186
285 Ga0496108_0139594
286 Ga0496109_0021074
287 Ga0496109_0262420
288 Ga0496109_0466293
289 Ga0496110_0003261
290 Ga0496112_0000005
291 Ga0496112_0031661
292 Ga0496112_0217067
293 Ga0496113_0002777
294 Ga0496114_0079234
295 Ga0501038_0065441
296 Ga0501039_0152587
297 Ga0501040_0269495
298 Ga0501041_0233823
299 Ga0501046_0111517
300 Ga0501048_0347635
301 Ga0501068_0004520
302 Ga0501072_0003363
303 Ga0501072_0005593
304 Ga0501072_0057483
305 Ga0501072_0251930
306 Ga0501074_0243139
307 Ga0501075_0031979
308 Ga0501075_0304089
309 Ga0501077_0069444
310 Ga0501079_0159183
311 Ga0501081_0008942
312 Ga0501081_0107691
313 Ga0501045_0254779
314 nmdc:mga05p37_3572_c1
315 nmdc:mga05p37_504626_c1
316 nmdc:mga05p37_637_c1
317 nmdc:mga09592_489_c1
318 nmdc:mga0qj67_10200_c1
319 nmdc:mga06r32_251712_c1
320 nmdc:mga06r32_401931_c1
321 nmdc:mga08y16_141420_c1
322 nmdc:mga0n895_50470_c1
323 nmdc:mga0rr50_103889_c1
324 nmdc:mga0a205_82051_c1
325 Ga0501084_0048956
326 Ga0501084_0302819
327 Ga0466962_0096601
328 Ga0530510_0115798

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

11

159

0.97

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

185

309

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cyx-assembly1.cif.gz_A crystal strcuture of glycine oxidase from bacillus cereus atcc 14579 0.9331 2 29
2vvl-assembly1.cif.gz_E the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9245 2 28
5ayv-assembly1.cif.gz_A crystal structure of archaeal ketopantoate reductase complexed with coenzyme a and 2-oxopantoate 0.9221 1 296
3hn2-assembly2.cif.gz_D crystal structure of 2-dehydropantoate 2-reductase from geobacter metallireducens gs-15 0.9201 1 290
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9177 1 296
ID Description Score Start End Superfamily
1vg9E01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9412 2 28 3.50.50.60
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9365 4 177 3.40.50.720
3ihgC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9261 2 28 3.50.50.60
3hwrB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9257 4 177 3.40.50.720
af_Q54LH3_697_827_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9228 181 292 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A3C0EDK8-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9821 1 201 GO:0005737
GO:0008677
GO:0015940
AF-A0A3D2YWQ4-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9797 1 178 GO:0005737
GO:0008677
GO:0015940
AF-A0A3D3WUA8-F1-model_v4 2-dehydropantoate 2-reductase 0.9787 1 157 GO:0005737
AF-A0A3B1AX93-F1-model_v4 2-dehydropantoate 2-reductase 0.9777 7 230 GO:0005737
GO:0008677
GO:0015940
AF-A0A382PQ93-F1-model_v4 Ketopantoate reductase N-terminal domain-containing protein 0.9772 1 149 GO:0005737

Map