F244362
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 164 | 129 | 164 | 102 |
Family's Representative Sequence
| Representative Sequence | 3300037471|Ga0395905_1444866|Ga0395905_1444866_82_513 |
| Length | 122 |
| Sequence | VRIELAHYLVLSGVLFSIGAAGFLVRRNALVALMSIELMLNAVNLTLIAFNRWQPIVDMPVRQAANAATVVGIPMIPHHGQVFAFFVIAVAAAEAAVGLAIVLSLYRVRKVVRTDDANLLKE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 3 | 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 4 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 7 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 22 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 23 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 24 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 25 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 26 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 27 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 29 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 30 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300012497 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 | Metagenome | Rhizosphere |
| 38 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 40 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300027378 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 52 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 55 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 56 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 57 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 58 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 59 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 60 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 61 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 62 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 63 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 64 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 65 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 66 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 67 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 68 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 69 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 70 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 71 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 72 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 73 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 74 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 75 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 77 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 78 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 79 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 80 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 81 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 82 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 83 | 3300042008 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 | Metagenome | Rhizosphere |
| 84 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 85 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 86 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 87 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 88 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 89 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 90 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 91 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 99 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 100 | 3300049556 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 101 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 102 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 111 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 123 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 124 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300059477 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 126 | 3300059493 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 127 | 3300059639 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 128 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.95 |
| Metatranscriptomes | 3.05 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.22 |
| Nodule | 0 |
| Rhizoplane | 0.61 |
| Rhizosphere | 95.12 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.05 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10000551 | 3300003203 | Bacteria | 17619 |
| 2 | JGI25406J46586_10001262 | 3300003203 | Bacteria | 11872 |
| 3 | JGI25406J46586_10163843 | 3300003203 | Bacteria | 648 |
| 4 | rootH1_10158236 | 3300003323 | Bacteria | 1145 |
| 5 | Ga0058859_11724148 | 3300004798 | Bacteria | 2279 |
| 6 | Ga0065704_10638504 | 3300005289 | Unclassified | 588 |
| 7 | Ga0070683_100287177 | 3300005329 | Bacteria | 1565 |
| 8 | Ga0070683_100337200 | 3300005329 | Bacteria | 1436 |
| 9 | Ga0070690_101284819 | 3300005330 | Bacteria | 586 |
| 10 | Ga0070670_100283972 | 3300005331 | Bacteria | 1445 |
| 11 | Ga0068868_101152666 | 3300005338 | Bacteria | 715 |
| 12 | Ga0070689_100843398 | 3300005340 | Bacteria | 808 |
| 13 | Ga0070674_100217706 | 3300005356 | Bacteria | 1484 |
| 14 | Ga0070710_10682369 | 3300005437 | Unclassified | 723 |
| 15 | Ga0070700_100291161 | 3300005441 | Bacteria | 1188 |
| 16 | Ga0070663_100725578 | 3300005455 | Bacteria | 847 |
| 17 | Ga0070678_101827729 | 3300005456 | Bacteria | 573 |
| 18 | Ga0070662_101077591 | 3300005457 | Unclassified | 689 |
| 19 | Ga0070707_100802722 | 3300005468 | Bacteria | 905 |
| 20 | Ga0070698_100658029 | 3300005471 | Bacteria | 989 |
| 21 | Ga0070699_100330533 | 3300005518 | Bacteria | 1371 |
| 22 | Ga0070704_100367998 | 3300005549 | Bacteria | 1218 |
| 23 | Ga0070702_100614719 | 3300005615 | Bacteria | 817 |
| 24 | Ga0070702_101805487 | 3300005615 | Bacteria | 511 |
| 25 | Ga0068861_100831911 | 3300005719 | Bacteria | 869 |
| 26 | Ga0068863_101499128 | 3300005841 | Unclassified | 683 |
| 27 | Ga0068860_100772761 | 3300005843 | Bacteria | 973 |
| 28 | Ga0081455_10032518 | 3300005937 | Bacteria | 4699 |
| 29 | Ga0081539_10000074 | 3300005985 | Bacteria | 231435 |
| 30 | Ga0081539_10001558 | 3300005985 | Bacteria | 38098 |
| 31 | Ga0081539_10001853 | 3300005985 | Bacteria | 33320 |
| 32 | Ga0081539_10179139 | 3300005985 | Bacteria | 996 |
| 33 | Ga0070716_101072472 | 3300006173 | Bacteria | 641 |
| 34 | Ga0097621_100118594 | 3300006237 | Bacteria | 2243 |
| 35 | Ga0075431_102004356 | 3300006847 | Bacteria | 534 |
| 36 | Ga0075433_10149209 | 3300006852 | Bacteria | 2079 |
| 37 | Ga0105240_10670673 | 3300009093 | Bacteria | 1134 |
| 38 | Ga0111539_10016318 | 3300009094 | Bacteria | 9207 |
| 39 | Ga0111539_10024995 | 3300009094 | Bacteria | 7320 |
| 40 | Ga0114129_10552353 | 3300009147 | Bacteria | 1497 |
| 41 | Ga0105242_12371389 | 3300009176 | Bacteria | 578 |
| 42 | Ga0105242_12471896 | 3300009176 | Bacteria | 567 |
| 43 | Ga0105249_10494638 | 3300009553 | Bacteria | 1267 |
| 44 | Ga0105249_11610357 | 3300009553 | Bacteria | 722 |
| 45 | Ga0105239_11465458 | 3300010375 | Bacteria | 788 |
| 46 | Ga0105246_12329221 | 3300011119 | Bacteria | 524 |
| 47 | Ga0157319_1028445 | 3300012497 | Bacteria | 590 |
| 48 | Ga0157372_12810306 | 3300013307 | Bacteria | 558 |
| 49 | Ga0182008_10934397 | 3300014497 | Bacteria | 513 |
| 50 | Ga0157376_11392117 | 3300014969 | Bacteria | 733 |
| 51 | Ga0207692_10524713 | 3300025898 | Unclassified | 754 |
| 52 | Ga0207663_11086862 | 3300025916 | Bacteria | 643 |
| 53 | Ga0207646_10744323 | 3300025922 | Bacteria | 875 |
| 54 | Ga0207686_11442741 | 3300025934 | Bacteria | 567 |
| 55 | Ga0207689_11214936 | 3300025942 | Bacteria | 634 |
| 56 | Ga0207677_11402076 | 3300026023 | Bacteria | 644 |
| 57 | Ga0207678_11056534 | 3300026067 | Bacteria | 719 |
| 58 | Ga0207708_10398760 | 3300026075 | Bacteria | 1137 |
| 59 | Ga0207676_10140197 | 3300026095 | Bacteria | 2069 |
| 60 | Ga0209981_1036570 | 3300027378 | Bacteria | 728 |
| 61 | Ga0207428_10068970 | 3300027907 | Bacteria | 2780 |
| 62 | Ga0207428_10545774 | 3300027907 | Bacteria | 839 |
| 63 | Ga0268265_11785605 | 3300028380 | Bacteria | 621 |
| 64 | Ga0268264_12007619 | 3300028381 | Unclassified | 587 |
| 65 | Ga0265331_10235756 | 3300031250 | Bacteria | 821 |
| 66 | Ga0316575_10001209 | 3300031665 | Bacteria | 8171 |
| 67 | Ga0316575_10013354 | 3300031665 | Bacteria | 3067 |
| 68 | Ga0316579_10064189 | 3300031691 | Bacteria | 1732 |
| 69 | Ga0316576_10026433 | 3300031727 | Bacteria | 4073 |
| 70 | Ga0316576_10435680 | 3300031727 | Bacteria | 969 |
| 71 | Ga0316576_10792990 | 3300031727 | Bacteria | 682 |
| 72 | Ga0316578_10007994 | 3300031728 | Bacteria | 5347 |
| 73 | Ga0316577_10023718 | 3300031733 | Bacteria | 3407 |
| 74 | Ga0316577_10289373 | 3300031733 | Bacteria | 928 |
| 75 | Ga0307416_101053992 | 3300032002 | Bacteria | 917 |
| 76 | Ga0307411_10616828 | 3300032005 | Bacteria | 935 |
| 77 | Ga0307415_101058502 | 3300032126 | Bacteria | 757 |
| 78 | Ga0316585_10001729 | 3300032137 | Bacteria | 5812 |
| 79 | Ga0373936_0022786 | 3300035113 | Bacteria | 2439 |
| 80 | Ga0373956_0102161 | 3300035119 | Bacteria | 1331 |
| 81 | Ga0316574_0002475 | 3300035398 | Bacteria | 9279 |
| 82 | Ga0316574_0037725 | 3300035398 | Bacteria | 2964 |
| 83 | Ga0316574_0590298 | 3300035398 | Bacteria | 687 |
| 84 | Ga0373931_0292125 | 3300035691 | Bacteria | 1004 |
| 85 | Ga0373935_0783975 | 3300035692 | Bacteria | 703 |
| 86 | Ga0373927_0100623 | 3300035695 | Bacteria | 1879 |
| 87 | Ga0373927_0481477 | 3300035695 | Bacteria | 820 |
| 88 | Ga0373933_0184354 | 3300035724 | Bacteria | 1332 |
| 89 | Ga0373947_1189649 | 3300035725 | Bacteria | 519 |
| 90 | Ga0373937_1234372 | 3300036401 | Bacteria | 696 |
| 91 | Ga0316582_0450321 | 3300036647 | Bacteria | 887 |
| 92 | Ga0316582_0508863 | 3300036647 | Unclassified | 830 |
| 93 | Ga0316584_0045584 | 3300036712 | Bacteria | 3273 |
| 94 | Ga0316584_0695105 | 3300036712 | Bacteria | 698 |
| 95 | Ga0373925_0062096 | 3300037068 | Bacteria | 2809 |
| 96 | Ga0395905_0098221 | 3300037471 | Bacteria | 2750 |
| 97 | Ga0395905_1444866 | 3300037471 | Unclassified | 592 |
| 98 | Ga0395905_1726684 | 3300037471 | Bacteria | 531 |
| 99 | Ga0436365_1766257 | 3300039437 | Bacteria | 734 |
| 100 | Ga0436360_0401391 | 3300039438 | Bacteria | 729 |
| 101 | Ga0436360_0919343 | 3300039438 | Bacteria | 884 |
| 102 | Ga0436361_0311165 | 3300039447 | Bacteria | 1077 |
| 103 | Ga0436363_0501989 | 3300039450 | Bacteria | 586 |
| 104 | Ga0436362_0972986 | 3300039453 | Bacteria | 761 |
| 105 | Ga0439431_0073910 | 3300041997 | Bacteria | 912 |
| 106 | Ga0439450_140933 | 3300042008 | Bacteria | 629 |
| 107 | Ga0439458_0057738 | 3300042157 | Bacteria | 965 |
| 108 | Ga0451577_0497788 | 3300042876 | Bacteria | 1106 |
| 109 | Ga0451577_0749651 | 3300042876 | Bacteria | 883 |
| 110 | Ga0451577_0774618 | 3300042876 | Bacteria | 867 |
| 111 | Ga0466969_0393831 | 3300044656 | Bacteria | 629 |
| 112 | Ga0453683_0513133 | 3300044673 | Bacteria | 778 |
| 113 | Ga0466966_0555647 | 3300044684 | Bacteria | 691 |
| 114 | Ga0453684_0320831 | 3300044712 | Bacteria | 1755 |
| 115 | Ga0451576_0357806 | 3300045051 | Bacteria | 1528 |
| 116 | Ga0451576_0602533 | 3300045051 | Bacteria | 1155 |
| 117 | Ga0451576_1008539 | 3300045051 | Bacteria | 872 |
| 118 | Ga0495629_1124400 | 3300046459 | Bacteria | 507 |
| 119 | Ga0495653_0009582 | 3300046463 | Bacteria | 7922 |
| 120 | Ga0495664_0334071 | 3300046477 | Bacteria | 913 |
| 121 | Ga0495640_0257778 | 3300046533 | Bacteria | 1090 |
| 122 | Ga0495586_0103910 | 3300046535 | Bacteria | 1578 |
| 123 | Ga0495600_0108201 | 3300046809 | Bacteria | 1811 |
| 124 | Ga0495684_0954954 | 3300047471 | Bacteria | 548 |
| 125 | Ga0496104_1507924 | 3300048907 | Bacteria | 575 |
| 126 | Ga0496117_0406082 | 3300048920 | Bacteria | 686 |
| 127 | Ga0501340_023284 | 3300049556 | Bacteria | 530 |
| 128 | Ga0501032_0079677 | 3300049569 | Bacteria | 2180 |
| 129 | Ga0501038_0143352 | 3300049574 | Bacteria | 1952 |
| 130 | Ga0501043_0210421 | 3300049579 | Bacteria | 1507 |
| 131 | Ga0501047_0006640 | 3300049581 | Bacteria | 10876 |
| 132 | Ga0501047_0082305 | 3300049581 | Bacteria | 3094 |
| 133 | Ga0501067_0003558 | 3300049583 | Bacteria | 8575 |
| 134 | Ga0501068_0000146 | 3300049584 | Bacteria | 32264 |
| 135 | Ga0501069_0001426 | 3300049585 | Bacteria | 11719 |
| 136 | Ga0501070_0039034 | 3300049586 | Bacteria | 3962 |
| 137 | Ga0501072_0000060 | 3300049588 | Bacteria | 79259 |
| 138 | Ga0501073_0078147 | 3300049589 | Bacteria | 2302 |
| 139 | Ga0501074_0020176 | 3300049590 | Bacteria | 4843 |
| 140 | Ga0501074_0412211 | 3300049590 | Bacteria | 958 |
| 141 | Ga0501076_0126339 | 3300049592 | Bacteria | 2072 |
| 142 | Ga0501076_1559668 | 3300049592 | Bacteria | 542 |
| 143 | Ga0501077_0029549 | 3300049593 | Bacteria | 3484 |
| 144 | Ga0501077_0571600 | 3300049593 | Bacteria | 726 |
| 145 | Ga0501079_0008362 | 3300049741 | Bacteria | 7841 |
| 146 | Ga0501079_1282157 | 3300049741 | Bacteria | 577 |
| 147 | Ga0501080_0202188 | 3300049742 | Bacteria | 1823 |
| 148 | Ga0501083_0038676 | 3300049744 | Bacteria | 3242 |
| 149 | Ga0501083_0865498 | 3300049744 | Bacteria | 588 |
| 150 | Ga0501044_0096077 | 3300049823 | Bacteria | 2985 |
| 151 | nmdc:mga08y16_10786_c1 | 3300050511 | Bacteria | 9591 |
| 152 | nmdc:mga08y16_23517_c1 | 3300050511 | Bacteria | 6511 |
| 153 | nmdc:mga0n895_994441_c1 | 3300050512 | Bacteria | 820 |
| 154 | nmdc:mga0a205_48168_c1 | 3300050515 | Bacteria | 4113 |
| 155 | Ga0495595_0389978 | 3300053084 | Bacteria | 705 |
| 156 | Ga0500643_002247 | 3300053087 | Bacteria | 10173 |
| 157 | Ga0500608_162386 | 3300053122 | Bacteria | 967 |
| 158 | Ga0501084_0000476 | 3300054114 | Bacteria | 30678 |
| 159 | Ga0587084_019043 | 3300059477 | Bacteria | 1007 |
| 160 | Ga0587077_054678 | 3300059493 | Bacteria | 846 |
| 161 | Ga0587062_116354 | 3300059639 | Bacteria | 536 |
| 162 | Ga0501082_0000061 | 3300060353 | Bacteria | 77564 |
| 163 | Ga0501082_0058155 | 3300060353 | Bacteria | 3331 |
| 164 | Ga0530510_0108995 | 3300061734 | Bacteria | 2027 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300036647 | Ga0316582_0450321 | Ga0316582_0450321_307_654 | 84 |
| 2 | 3300036712 | Ga0316584_0695105 | Ga0316584_0695105_102_449 | 84 |
| 3 | 3300031665 | Ga0316575_10013354 | Ga0316575_100133542 | 86 |
| 4 | 3300031691 | Ga0316579_10064189 | Ga0316579_100641893 | 86 |
| 5 | 3300031727 | Ga0316576_10026433 | Ga0316576_100264334 | 86 |
| 6 | 3300031728 | Ga0316578_10007994 | Ga0316578_100079945 | 86 |
| 7 | 3300031733 | Ga0316577_10023718 | Ga0316577_100237183 | 86 |
| 8 | 3300032137 | Ga0316585_10001729 | Ga0316585_100017293 | 86 |
| 9 | 3300035398 | Ga0316574_0002475 | Ga0316574_0002475_5479_5826 | 86 |
| 10 | 3300036712 | Ga0316584_0045584 | Ga0316584_0045584_679_1026 | 86 |
| 11 | 3300005441 | Ga0070700_100291161 | Ga0070700_1002911613 | 87 |
| 12 | 3300005549 | Ga0070704_100367998 | Ga0070704_1003679982 | 87 |
| 13 | 3300009094 | Ga0111539_10016318 | Ga0111539_100163184 | 87 |
| 14 | 3300026023 | Ga0207677_11402076 | Ga0207677_114020762 | 87 |
| 15 | 3300026075 | Ga0207708_10398760 | Ga0207708_103987602 | 87 |
| 16 | 3300027907 | Ga0207428_10068970 | Ga0207428_100689702 | 87 |
| 17 | 3300035695 | Ga0373927_0481477 | Ga0373927_0481477_287_592 | 87 |
| 18 | 3300046533 | Ga0495640_0257778 | Ga0495640_0257778_714_1019 | 87 |
| 19 | 3300050511 | nmdc:mga08y16_23517_c1 | nmdc:mga08y16_23517_c1_2470_2775 | 87 |
| 20 | 3300053084 | Ga0495595_0389978 | Ga0495595_0389978_31_336 | 87 |
| 21 | 3300031665 | Ga0316575_10001209 | Ga0316575_100012098 | 89 |
| 22 | 3300035398 | Ga0316574_0037725 | Ga0316574_0037725_201_533 | 89 |
| 23 | 3300036647 | Ga0316582_0508863 | Ga0316582_0508863_36_368 | 89 |
| 24 | 3300031733 | Ga0316577_10289373 | Ga0316577_102893732 | 93 |
| 25 | 3300005340 | Ga0070689_100843398 | Ga0070689_1008433982 | 99 |
| 26 | 3300012497 | Ga0157319_1028445 | Ga0157319_10284452 | 99 |
| 27 | 3300044684 | Ga0466966_0555647 | Ga0466966_0555647_231_530 | 99 |
| 28 | 3300003203 | JGI25406J46586_10000551 | JGI25406J46586_1000055111 | 100 |
| 29 | 3300003203 | JGI25406J46586_10001262 | JGI25406J46586_100012622 | 100 |
| 30 | 3300003203 | JGI25406J46586_10163843 | JGI25406J46586_101638431 | 100 |
| 31 | 3300003323 | rootH1_10158236 | rootH1_101582362 | 100 |
| 32 | 3300004798 | Ga0058859_11724148 | Ga0058859_117241482 | 100 |
| 33 | 3300005289 | Ga0065704_10638504 | Ga0065704_106385042 | 100 |
| 34 | 3300005329 | Ga0070683_100287177 | Ga0070683_1002871772 | 100 |
| 35 | 3300005329 | Ga0070683_100337200 | Ga0070683_1003372002 | 100 |
| 36 | 3300005330 | Ga0070690_101284819 | Ga0070690_1012848192 | 100 |
| 37 | 3300005331 | Ga0070670_100283972 | Ga0070670_1002839723 | 100 |
| 38 | 3300005338 | Ga0068868_101152666 | Ga0068868_1011526662 | 100 |
| 39 | 3300005356 | Ga0070674_100217706 | Ga0070674_1002177062 | 100 |
| 40 | 3300005437 | Ga0070710_10682369 | Ga0070710_106823692 | 100 |
| 41 | 3300005455 | Ga0070663_100725578 | Ga0070663_1007255782 | 100 |
| 42 | 3300005456 | Ga0070678_101827729 | Ga0070678_1018277291 | 100 |
| 43 | 3300005457 | Ga0070662_101077591 | Ga0070662_1010775912 | 100 |
| 44 | 3300005468 | Ga0070707_100802722 | Ga0070707_1008027222 | 100 |
| 45 | 3300005471 | Ga0070698_100658029 | Ga0070698_1006580292 | 100 |
| 46 | 3300005518 | Ga0070699_100330533 | Ga0070699_1003305332 | 100 |
| 47 | 3300005615 | Ga0070702_100614719 | Ga0070702_1006147192 | 100 |
| 48 | 3300005615 | Ga0070702_101805487 | Ga0070702_1018054872 | 100 |
| 49 | 3300005719 | Ga0068861_100831911 | Ga0068861_1008319112 | 100 |
| 50 | 3300005841 | Ga0068863_101499128 | Ga0068863_1014991281 | 100 |
| 51 | 3300005843 | Ga0068860_100772761 | Ga0068860_1007727612 | 100 |
| 52 | 3300005937 | Ga0081455_10032518 | Ga0081455_100325186 | 100 |
| 53 | 3300005985 | Ga0081539_10000074 | Ga0081539_1000007417 | 100 |
| 54 | 3300005985 | Ga0081539_10001558 | Ga0081539_100015582 | 100 |
| 55 | 3300005985 | Ga0081539_10001853 | Ga0081539_1000185331 | 100 |
| 56 | 3300005985 | Ga0081539_10179139 | Ga0081539_101791393 | 100 |
| 57 | 3300006173 | Ga0070716_101072472 | Ga0070716_1010724722 | 100 |
| 58 | 3300006237 | Ga0097621_100118594 | Ga0097621_1001185942 | 100 |
| 59 | 3300006847 | Ga0075431_102004356 | Ga0075431_1020043561 | 100 |
| 60 | 3300006852 | Ga0075433_10149209 | Ga0075433_101492092 | 100 |
| 61 | 3300009093 | Ga0105240_10670673 | Ga0105240_106706732 | 100 |
| 62 | 3300009094 | Ga0111539_10024995 | Ga0111539_100249958 | 100 |
| 63 | 3300009147 | Ga0114129_10552353 | Ga0114129_105523531 | 100 |
| 64 | 3300009176 | Ga0105242_12371389 | Ga0105242_123713892 | 100 |
| 65 | 3300009176 | Ga0105242_12471896 | Ga0105242_124718962 | 100 |
| 66 | 3300009553 | Ga0105249_10494638 | Ga0105249_104946382 | 100 |
| 67 | 3300009553 | Ga0105249_11610357 | Ga0105249_116103572 | 100 |
| 68 | 3300010375 | Ga0105239_11465458 | Ga0105239_114654582 | 100 |
| 69 | 3300011119 | Ga0105246_12329221 | Ga0105246_123292211 | 100 |
| 70 | 3300013307 | Ga0157372_12810306 | Ga0157372_128103062 | 100 |
| 71 | 3300014497 | Ga0182008_10934397 | Ga0182008_109343971 | 100 |
| 72 | 3300014969 | Ga0157376_11392117 | Ga0157376_113921172 | 100 |
| 73 | 3300025898 | Ga0207692_10524713 | Ga0207692_105247132 | 100 |
| 74 | 3300025916 | Ga0207663_11086862 | Ga0207663_110868621 | 100 |
| 75 | 3300025922 | Ga0207646_10744323 | Ga0207646_107443232 | 100 |
| 76 | 3300025934 | Ga0207686_11442741 | Ga0207686_114427412 | 100 |
| 77 | 3300025942 | Ga0207689_11214936 | Ga0207689_112149362 | 100 |
| 78 | 3300026067 | Ga0207678_11056534 | Ga0207678_110565342 | 100 |
| 79 | 3300026095 | Ga0207676_10140197 | Ga0207676_101401973 | 100 |
| 80 | 3300027378 | Ga0209981_1036570 | Ga0209981_10365702 | 100 |
| 81 | 3300027907 | Ga0207428_10545774 | Ga0207428_105457742 | 100 |
| 82 | 3300028380 | Ga0268265_11785605 | Ga0268265_117856051 | 100 |
| 83 | 3300028381 | Ga0268264_12007619 | Ga0268264_120076192 | 100 |
| 84 | 3300031250 | Ga0265331_10235756 | Ga0265331_102357561 | 100 |
| 85 | 3300031727 | Ga0316576_10435680 | Ga0316576_104356802 | 100 |
| 86 | 3300031727 | Ga0316576_10792990 | Ga0316576_107929902 | 100 |
| 87 | 3300032002 | Ga0307416_101053992 | Ga0307416_1010539922 | 100 |
| 88 | 3300032005 | Ga0307411_10616828 | Ga0307411_106168282 | 100 |
| 89 | 3300032126 | Ga0307415_101058502 | Ga0307415_1010585022 | 100 |
| 90 | 3300035113 | Ga0373936_0022786 | Ga0373936_0022786_619_948 | 100 |
| 91 | 3300035119 | Ga0373956_0102161 | Ga0373956_0102161_634_963 | 100 |
| 92 | 3300035398 | Ga0316574_0590298 | Ga0316574_0590298_96_410 | 100 |
| 93 | 3300035691 | Ga0373931_0292125 | Ga0373931_0292125_92_403 | 100 |
| 94 | 3300035692 | Ga0373935_0783975 | Ga0373935_0783975_302_631 | 100 |
| 95 | 3300035695 | Ga0373927_0100623 | Ga0373927_0100623_737_1066 | 100 |
| 96 | 3300035724 | Ga0373933_0184354 | Ga0373933_0184354_780_1085 | 100 |
| 97 | 3300035725 | Ga0373947_1189649 | Ga0373947_1189649_155_463 | 100 |
| 98 | 3300036401 | Ga0373937_1234372 | Ga0373937_1234372_174_503 | 100 |
| 99 | 3300037068 | Ga0373925_0062096 | Ga0373925_0062096_1451_1780 | 100 |
| 100 | 3300037471 | Ga0395905_0098221 | Ga0395905_0098221_1151_1462 | 100 |
| 101 | 3300037471 | Ga0395905_1444866 | Ga0395905_1444866_82_513 | 100 |
| 102 | 3300037471 | Ga0395905_1726684 | Ga0395905_1726684_184_492 | 100 |
| 103 | 3300039437 | Ga0436365_1766257 | Ga0436365_1766257_273_578 | 100 |
| 104 | 3300039438 | Ga0436360_0401391 | Ga0436360_0401391_387_698 | 100 |
| 105 | 3300039438 | Ga0436360_0919343 | Ga0436360_0919343_343_645 | 100 |
| 106 | 3300039447 | Ga0436361_0311165 | Ga0436361_0311165_329_631 | 100 |
| 107 | 3300039450 | Ga0436363_0501989 | Ga0436363_0501989_70_372 | 100 |
| 108 | 3300039453 | Ga0436362_0972986 | Ga0436362_0972986_64_366 | 100 |
| 109 | 3300041997 | Ga0439431_0073910 | Ga0439431_0073910_484_789 | 100 |
| 110 | 3300042008 | Ga0439450_140933 | Ga0439450_140933_282_584 | 100 |
| 111 | 3300042157 | Ga0439458_0057738 | Ga0439458_0057738_150_458 | 100 |
| 112 | 3300042876 | Ga0451577_0497788 | Ga0451577_0497788_371_673 | 100 |
| 113 | 3300042876 | Ga0451577_0749651 | Ga0451577_0749651_481_846 | 100 |
| 114 | 3300042876 | Ga0451577_0774618 | Ga0451577_0774618_88_390 | 100 |
| 115 | 3300044656 | Ga0466969_0393831 | Ga0466969_0393831_246_557 | 100 |
| 116 | 3300044673 | Ga0453683_0513133 | Ga0453683_0513133_395_697 | 100 |
| 117 | 3300044712 | Ga0453684_0320831 | Ga0453684_0320831_1147_1449 | 100 |
| 118 | 3300045051 | Ga0451576_0357806 | Ga0451576_0357806_411_713 | 100 |
| 119 | 3300045051 | Ga0451576_0602533 | Ga0451576_0602533_522_824 | 100 |
| 120 | 3300045051 | Ga0451576_1008539 | Ga0451576_1008539_70_381 | 100 |
| 121 | 3300046459 | Ga0495629_1124400 | Ga0495629_1124400_25_342 | 100 |
| 122 | 3300046463 | Ga0495653_0009582 | Ga0495653_0009582_502_819 | 100 |
| 123 | 3300046477 | Ga0495664_0334071 | Ga0495664_0334071_194_511 | 100 |
| 124 | 3300046535 | Ga0495586_0103910 | Ga0495586_0103910_350_658 | 100 |
| 125 | 3300046809 | Ga0495600_0108201 | Ga0495600_0108201_338_655 | 100 |
| 126 | 3300047471 | Ga0495684_0954954 | Ga0495684_0954954_108_425 | 100 |
| 127 | 3300048907 | Ga0496104_1507924 | Ga0496104_1507924_67_378 | 100 |
| 128 | 3300048920 | Ga0496117_0406082 | Ga0496117_0406082_163_474 | 100 |
| 129 | 3300049556 | Ga0501340_023284 | Ga0501340_023284_198_515 | 100 |
| 130 | 3300049569 | Ga0501032_0079677 | Ga0501032_0079677_1116_1433 | 100 |
| 131 | 3300049574 | Ga0501038_0143352 | Ga0501038_0143352_1383_1700 | 100 |
| 132 | 3300049579 | Ga0501043_0210421 | Ga0501043_0210421_259_576 | 100 |
| 133 | 3300049581 | Ga0501047_0006640 | Ga0501047_0006640_6880_7197 | 100 |
| 134 | 3300049581 | Ga0501047_0082305 | Ga0501047_0082305_305_610 | 100 |
| 135 | 3300049583 | Ga0501067_0003558 | Ga0501067_0003558_6876_7193 | 100 |
| 136 | 3300049584 | Ga0501068_0000146 | Ga0501068_0000146_719_1036 | 100 |
| 137 | 3300049585 | Ga0501069_0001426 | Ga0501069_0001426_3665_3982 | 100 |
| 138 | 3300049586 | Ga0501070_0039034 | Ga0501070_0039034_1963_2280 | 100 |
| 139 | 3300049588 | Ga0501072_0000060 | Ga0501072_0000060_71957_72274 | 100 |
| 140 | 3300049589 | Ga0501073_0078147 | Ga0501073_0078147_375_692 | 100 |
| 141 | 3300049590 | Ga0501074_0020176 | Ga0501074_0020176_3144_3461 | 100 |
| 142 | 3300049590 | Ga0501074_0412211 | Ga0501074_0412211_614_922 | 100 |
| 143 | 3300049592 | Ga0501076_0126339 | Ga0501076_0126339_502_819 | 100 |
| 144 | 3300049592 | Ga0501076_1559668 | Ga0501076_1559668_181_483 | 100 |
| 145 | 3300049593 | Ga0501077_0029549 | Ga0501077_0029549_2613_2930 | 100 |
| 146 | 3300049593 | Ga0501077_0571600 | Ga0501077_0571600_99_401 | 100 |
| 147 | 3300049741 | Ga0501079_0008362 | Ga0501079_0008362_1399_1716 | 100 |
| 148 | 3300049741 | Ga0501079_1282157 | Ga0501079_1282157_258_566 | 100 |
| 149 | 3300049742 | Ga0501080_0202188 | Ga0501080_0202188_1254_1571 | 100 |
| 150 | 3300049744 | Ga0501083_0038676 | Ga0501083_0038676_1609_1926 | 100 |
| 151 | 3300049744 | Ga0501083_0865498 | Ga0501083_0865498_120_437 | 100 |
| 152 | 3300049823 | Ga0501044_0096077 | Ga0501044_0096077_1717_2034 | 100 |
| 153 | 3300050511 | nmdc:mga08y16_10786_c1 | nmdc:mga08y16_10786_c1_229_531 | 100 |
| 154 | 3300050512 | nmdc:mga0n895_994441_c1 | nmdc:mga0n895_994441_c1_128_430 | 100 |
| 155 | 3300050515 | nmdc:mga0a205_48168_c1 | nmdc:mga0a205_48168_c1_619_921 | 100 |
| 156 | 3300053087 | Ga0500643_002247 | Ga0500643_002247_2639_2950 | 100 |
| 157 | 3300053122 | Ga0500608_162386 | Ga0500608_162386_124_435 | 100 |
| 158 | 3300054114 | Ga0501084_0000476 | Ga0501084_0000476_23358_23675 | 100 |
| 159 | 3300059477 | Ga0587084_019043 | Ga0587084_019043_117_431 | 100 |
| 160 | 3300059493 | Ga0587077_054678 | Ga0587077_054678_477_788 | 100 |
| 161 | 3300059639 | Ga0587062_116354 | Ga0587062_116354_104_415 | 100 |
| 162 | 3300060353 | Ga0501082_0000061 | Ga0501082_0000061_867_1184 | 100 |
| 163 | 3300060353 | Ga0501082_0058155 | Ga0501082_0058155_214_531 | 100 |
| 164 | 3300061734 | Ga0530510_0108995 | Ga0530510_0108995_957_1274 | 100 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8e73-assembly1.cif.gz_4L | vigna radiata supercomplex i+iii2 (full bridge) | 0.8644 | 4 | 88 |
| 7a24-assembly1.cif.gz_K | assembly intermediate of the plant mitochondrial complex i | 0.864 | 3 | 85 |
| 8bef-assembly1.cif.gz_K | cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane core) | 0.8588 | 4 | 88 |
| 7zmh-assembly1.cif.gz_L | cryoem structure of mitochondrial complex i from chaetomium thermophilum (state 1) - membrane arm | 0.8587 | 10 | 88 |
| 5lnk-assembly1.cif.gz_K | entire ovine respiratory complex i | 0.8568 | 11 | 83 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A3B6U9Q8_4_99_1.10.287.3510 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8826 | 6 | 88 | 1.10.287.3510 |
| 5lnkK00 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8568 | 11 | 83 | 1.10.287.3510 |
| af_Q2G2E1_15_96_1.10.287.3510 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8514 | 8 | 83 | 1.10.287.3510 |
| af_Q2FZV1_630_695_1.10.287.3510 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8513 | 14 | 81 | 1.10.287.3510 |
| af_P03901_1_98_1.10.287.3510 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins; | 0.8398 | 8 | 86 | 1.10.287.3510 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A535WLR6-F1-model_v4 | Uncharacterized protein | 0.9101 | 1 | 83 |
GO:0016020
|
| AF-C8XH07-F1-model_v4 | Multiple resistance and pH regulation protein F | 0.909 | 4 | 79 |
GO:0005886
GO:0015385 |
| AF-A0A845LIG9-F1-model_v4 | pH regulation protein F | 0.8941 | 3 | 82 |
GO:0005886
GO:0015385 |
| AF-A8ABM2-F1-model_v4 | NADH-ubiquinone oxidoreductase, chain 4L | 0.8926 | 4 | 86 |
GO:0016020
|
| AF-A0A099F0H4-F1-model_v4 | Cation:proton antiporter | 0.8926 | 4 | 81 |
GO:0005886
GO:0015385 |
Predicted Structure (AlphaFold2)
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