F244234

General Info

Members Datasets Scaffolds Average Seq Length
164 119 328 201

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10000916|Ga0307407_100009161
Length 225
Sequence MNRRPKDYARPDRHTLAAKAAGYPARSVFKLEEIQQRYRLFKPGQRVLDLGAAPGSWSLYASKLVGPAGKVLAVDLSEISEALPPNVSVRQLDVFSAERAVLAEHGPYDVVLSDMAPRTSGNKSRDQALSYDLCVRALAVADELGGAGSHFVAKLFMCAEFGDLKRAITARYSECRVVRPEATRSQSTEVFLVGLKRKIPQKDGAEAPSTAPAVPPGDGGAREPS

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
63 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
64 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
95 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
114 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
117 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.44
Nodule 0
Rhizoplane 3.05
Rhizosphere 89.02
Stem 0
Stem Tuber 0
Unclassified 16.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10000916 3300031903 Bacteria 9974
2 rootH2_10086744 3300003320 Bacteria 2574
3 rootL2_10305918 3300003322 Bacteria 1721
4 rootH1_10080003 3300003323 Bacteria 2002
5 JGI25404J52841_10005079 3300003659 Bacteria 2706
6 Ga0070683_100042217 3300005329 Bacteria 4199
7 Ga0070683_100575965 3300005329 Bacteria 1077
8 Ga0070683_100980108 3300005329 Unclassified 811
9 Ga0070666_10559908 3300005335 Archaea 832
10 Ga0070682_100009102 3300005337 Bacteria 5614
11 Ga0068868_100003482 3300005338 Bacteria 10952
12 Ga0070692_10288626 3300005345 Unclassified 997
13 Ga0070668_100087589 3300005347 Bacteria 2450
14 Ga0070675_100173758 3300005354 Bacteria 1859
15 Ga0070659_100612994 3300005366 Bacteria 936
16 Ga0070678_100034175 3300005456 Bacteria 3539
17 Ga0068867_100060090 3300005459 Bacteria 2819
18 Ga0068867_100093457 3300005459 Bacteria 2286
19 Ga0070706_100000574 3300005467 Bacteria 42782
20 Ga0070707_100820770 3300005468 Bacteria 894
21 Ga0070672_100000267 3300005543 Bacteria 29530
22 Ga0070696_100212544 3300005546 Bacteria 1448
23 Ga0070665_100383873 3300005548 Unclassified 1412
24 Ga0070665_100737387 3300005548 Bacteria 998
25 Ga0068855_100000076 3300005563 Bacteria 118910
26 Ga0070664_100000234 3300005564 Bacteria 39862
27 Ga0068857_100060640 3300005577 Bacteria 3360
28 Ga0068852_100436915 3300005616 Bacteria 1293
29 Ga0068859_100164857 3300005617 Bacteria 2296
30 Ga0068863_100068163 3300005841 Unclassified 3366
31 Ga0081540_1005011 3300005983 Bacteria 9947
32 Ga0081540_1022348 3300005983 Bacteria 3736
33 Ga0070717_10484645 3300006028 Bacteria 1117
34 Ga0070712_100025924 3300006175 Bacteria 3901
35 Ga0075366_10368832 3300006195 Unclassified 882
36 Ga0097621_100032187 3300006237 Bacteria 4167
37 Ga0097621_100047172 3300006237 Bacteria 3490
38 Ga0068871_100040827 3300006358 Bacteria 3718
39 Ga0068871_100319272 3300006358 Unclassified 1367
40 Ga0075429_100246239 3300006880 Bacteria 1565
41 Ga0097620_100164860 3300006931 Bacteria 2296
42 Ga0075435_100004571 3300007076 Bacteria 9524
43 Ga0111539_10016167 3300009094 Bacteria 9258
44 Ga0105245_10242222 3300009098 Bacteria 1748
45 Ga0105245_10276565 3300009098 Bacteria 1640
46 Ga0105243_10711079 3300009148 Bacteria 980
47 Ga0105243_10861615 3300009148 Bacteria 898
48 Ga0105242_11045834 3300009176 Archaea 827
49 Ga0157374_10306242 3300013296 Bacteria 1572
50 Ga0157372_10720205 3300013307 Bacteria 1161
51 Ga0157380_10553306 3300014326 Bacteria 1129
52 Ga0157376_10493183 3300014969 Bacteria 1202
53 Ga0157376_10578301 3300014969 Bacteria 1115
54 Ga0157376_10885977 3300014969 Bacteria 910
55 Ga0207659_10224233 3300025926 Bacteria 1513
56 Ga0207687_10098916 3300025927 Bacteria 2142
57 Ga0207644_10323602 3300025931 Bacteria 1247
58 Ga0207690_10977538 3300025932 Unclassified 704
59 Ga0207709_10164663 3300025935 Bacteria 1550
60 Ga0207691_10000386 3300025940 Bacteria 44174
61 Ga0207661_10556852 3300025944 Unclassified 1051
62 Ga0207679_10001496 3300025945 Bacteria 14646
63 Ga0207667_10004847 3300025949 Bacteria 16448
64 Ga0207667_10064286 3300025949 Bacteria 3831
65 Ga0207677_10007454 3300026023 Bacteria 6055
66 Ga0207702_10138293 3300026078 Bacteria 2200
67 Ga0207641_10211534 3300026088 Unclassified 1794
68 Ga0207641_10370533 3300026088 Unclassified 1369
69 Ga0207641_10385430 3300026088 Bacteria 1343
70 Ga0207648_10129125 3300026089 Bacteria 2224
71 Ga0207648_10132058 3300026089 Bacteria 2198
72 Ga0207674_10075849 3300026116 Bacteria 3371
73 Ga0207675_100184298 3300026118 Bacteria 2000
74 Ga0207683_10071137 3300026121 Bacteria 3075
75 Ga0207683_10666218 3300026121 Bacteria 964
76 Ga0207698_10629040 3300026142 Bacteria 1061
77 Ga0268266_10586868 3300028379 Bacteria 1070
78 Ga0265337_1071791 3300028556 Bacteria 951
79 Ga0265319_1000409 3300028563 Bacteria 30987
80 Ga0265319_1018253 3300028563 Unclassified 2646
81 Ga0265318_10000057 3300028577 Bacteria 112029
82 Ga0265318_10001743 3300028577 Bacteria 12443
83 Ga0265338_10053325 3300028800 Bacteria 3619
84 Ga0265338_10198688 3300028800 Bacteria 1513
85 Ga0265330_10000039 3300031235 Bacteria 119986
86 Ga0265332_10000051 3300031238 Bacteria 111978
87 Ga0265320_10000264 3300031240 Bacteria 43360
88 Ga0265320_10010074 3300031240 Bacteria 5653
89 Ga0265325_10001613 3300031241 Bacteria 15733
90 Ga0265325_10069602 3300031241 Bacteria 1769
91 Ga0265329_10000024 3300031242 Bacteria 61461
92 Ga0265340_10007758 3300031247 Bacteria 5818
93 Ga0265340_10012221 3300031247 Bacteria 4536
94 Ga0265339_10002174 3300031249 Bacteria 14211
95 Ga0265339_10245472 3300031249 Bacteria 868
96 Ga0265331_10000291 3300031250 Bacteria 55131
97 Ga0265316_10000024 3300031344 Bacteria 172403
98 Ga0265316_10002171 3300031344 Bacteria 20614
99 Ga0265316_10004299 3300031344 Bacteria 14227
100 Ga0307513_10153189 3300031456 Bacteria 2210
101 Ga0265313_10000017 3300031595 Bacteria 152910
102 Ga0265313_10000613 3300031595 Bacteria 36961
103 Ga0307508_10002449 3300031616 Bacteria 19567
104 Ga0307508_10110166 3300031616 Bacteria 2352
105 Ga0316579_10237750 3300031691 Bacteria 881
106 Ga0265314_10000001 3300031711 Bacteria 3792860
107 Ga0265314_10000059 3300031711 Bacteria 165850
108 Ga0265314_10090493 3300031711 Bacteria 1993
109 Ga0265342_10000022 3300031712 Bacteria 173053
110 Ga0265342_10242160 3300031712 Bacteria 965
111 Ga0316576_10000514 3300031727 Bacteria 18170
112 Ga0316576_10003019 3300031727 Bacteria 9778
113 Ga0316578_10022527 3300031728 Bacteria 3513
114 Ga0307516_10003830 3300031730 Bacteria 19054
115 Ga0316580_10006870 3300032139 Unclassified 3371
116 Ga0307507_10131699 3300033179 Unclassified 1953
117 Ga0373948_0101134 3300034817 Unclassified 679
118 Ga0373934_0042121 3300035086 Bacteria 1803
119 Ga0373937_0414484 3300036401 Bacteria 1278
120 Ga0316582_0013949 3300036647 Bacteria 4543
121 Ga0316582_0031771 3300036647 Bacteria 3230
122 Ga0316582_0161505 3300036647 Bacteria 1518
123 Ga0395905_0005233 3300037471 Bacteria 13276
124 Ga0395905_0476980 3300037471 Unclassified 1147
125 Ga0436361_0084259 3300039447 Bacteria 899
126 Ga0451791_0518609 3300041451 Unclassified 818
127 Ga0451793_1786327 3300041452 Bacteria 2107
128 Ga0451807_2651598 3300041486 Unclassified 775
129 Ga0451851_1155855 3300041507 Bacteria 1313
130 Ga0451577_0454577 3300042876 Unclassified 1163
131 Ga0453683_0185787 3300044673 Bacteria 1319
132 Ga0466960_0134568 3300044901 Unclassified 1308
133 Ga0451576_0019628 3300045051 Bacteria 7376
134 Ga0451576_0581073 3300045051 Bacteria 1177
135 Ga0451576_0753805 3300045051 Unclassified 1023
136 Ga0451576_1370923 3300045051 Unclassified 736
137 Ga0466967_0285172 3300045976 Bacteria 1585
138 Ga0495667_0043750 3300046559 Bacteria 2967
139 Ga0496102_0144067 3300048905 Bacteria 2235
140 Ga0496107_0247391 3300048910 Bacteria 1327
141 Ga0501034_0016831 3300049571 Bacteria 7497
142 Ga0501034_0231657 3300049571 Bacteria 1796
143 Ga0501034_0510404 3300049571 Bacteria 1115
144 Ga0501037_0493878 3300049573 Bacteria 831
145 Ga0501047_0057312 3300049581 Bacteria 3768
146 Ga0501047_0141323 3300049581 Bacteria 2286
147 Ga0501067_0263940 3300049583 Unclassified 958
148 Ga0501070_0422949 3300049586 Unclassified 1076
149 Ga0501077_0044027 3300049593 Unclassified 2836
150 Ga0501080_0195065 3300049742 Bacteria 1860
151 Ga0501080_1004391 3300049742 Unclassified 723
152 Ga0501083_0009739 3300049744 Bacteria 6786
153 Ga0501035_0114533 3300049822 Bacteria 2361
154 nmdc:mga0k408_478074_c1 3300050493 Unclassified 739
155 nmdc:mga09592_421481_c1 3300050508 Bacteria 1153
156 nmdc:mga08y16_11735_c1 3300050511 Bacteria 9205
157 nmdc:mga08y16_39649_c1 3300050511 Bacteria 4941
158 nmdc:mga08y16_759604_c1 3300050511 Bacteria 965
159 Ga0500643_001826 3300053087 Bacteria 11631
160 Ga0500568_0005219 3300053139 Bacteria 6764
161 Ga0501084_0002867 3300054114 Bacteria 13943
162 Ga0501084_0045756 3300054114 Bacteria 3663
163 Ga0501084_0265439 3300054114 Bacteria 1449
164 Ga0466962_0142983 3300061719 Unclassified 1159
165 Ga0307407_10000916
166 rootH2_10086744
167 rootL2_10305918
168 rootH1_10080003
169 JGI25404J52841_10005079
170 Ga0070683_100042217
171 Ga0070683_100575965
172 Ga0070683_100980108
173 Ga0070666_10559908
174 Ga0070682_100009102
175 Ga0068868_100003482
176 Ga0070692_10288626
177 Ga0070668_100087589
178 Ga0070675_100173758
179 Ga0070659_100612994
180 Ga0070678_100034175
181 Ga0068867_100060090
182 Ga0068867_100093457
183 Ga0070706_100000574
184 Ga0070707_100820770
185 Ga0070672_100000267
186 Ga0070696_100212544
187 Ga0070665_100383873
188 Ga0070665_100737387
189 Ga0068855_100000076
190 Ga0070664_100000234
191 Ga0068857_100060640
192 Ga0068852_100436915
193 Ga0068859_100164857
194 Ga0068863_100068163
195 Ga0081540_1005011
196 Ga0081540_1022348
197 Ga0070717_10484645
198 Ga0070712_100025924
199 Ga0075366_10368832
200 Ga0097621_100032187
201 Ga0097621_100047172
202 Ga0068871_100040827
203 Ga0068871_100319272
204 Ga0075429_100246239
205 Ga0097620_100164860
206 Ga0075435_100004571
207 Ga0111539_10016167
208 Ga0105245_10242222
209 Ga0105245_10276565
210 Ga0105243_10711079
211 Ga0105243_10861615
212 Ga0105242_11045834
213 Ga0157374_10306242
214 Ga0157372_10720205
215 Ga0157380_10553306
216 Ga0157376_10493183
217 Ga0157376_10578301
218 Ga0157376_10885977
219 Ga0207659_10224233
220 Ga0207687_10098916
221 Ga0207644_10323602
222 Ga0207690_10977538
223 Ga0207709_10164663
224 Ga0207691_10000386
225 Ga0207661_10556852
226 Ga0207679_10001496
227 Ga0207667_10004847
228 Ga0207667_10064286
229 Ga0207677_10007454
230 Ga0207702_10138293
231 Ga0207641_10211534
232 Ga0207641_10370533
233 Ga0207641_10385430
234 Ga0207648_10129125
235 Ga0207648_10132058
236 Ga0207674_10075849
237 Ga0207675_100184298
238 Ga0207683_10071137
239 Ga0207683_10666218
240 Ga0207698_10629040
241 Ga0268266_10586868
242 Ga0265337_1071791
243 Ga0265319_1000409
244 Ga0265319_1018253
245 Ga0265318_10000057
246 Ga0265318_10001743
247 Ga0265338_10053325
248 Ga0265338_10198688
249 Ga0265330_10000039
250 Ga0265332_10000051
251 Ga0265320_10000264
252 Ga0265320_10010074
253 Ga0265325_10001613
254 Ga0265325_10069602
255 Ga0265329_10000024
256 Ga0265340_10007758
257 Ga0265340_10012221
258 Ga0265339_10002174
259 Ga0265339_10245472
260 Ga0265331_10000291
261 Ga0265316_10000024
262 Ga0265316_10002171
263 Ga0265316_10004299
264 Ga0307513_10153189
265 Ga0265313_10000017
266 Ga0265313_10000613
267 Ga0307508_10002449
268 Ga0307508_10110166
269 Ga0316579_10237750
270 Ga0265314_10000001
271 Ga0265314_10000059
272 Ga0265314_10090493
273 Ga0265342_10000022
274 Ga0265342_10242160
275 Ga0316576_10000514
276 Ga0316576_10003019
277 Ga0316578_10022527
278 Ga0307516_10003830
279 Ga0316580_10006870
280 Ga0307507_10131699
281 Ga0373948_0101134
282 Ga0373934_0042121
283 Ga0373937_0414484
284 Ga0316582_0013949
285 Ga0316582_0031771
286 Ga0316582_0161505
287 Ga0395905_0005233
288 Ga0395905_0476980
289 Ga0436361_0084259
290 Ga0451791_0518609
291 Ga0451793_1786327
292 Ga0451807_2651598
293 Ga0451851_1155855
294 Ga0451577_0454577
295 Ga0453683_0185787
296 Ga0466960_0134568
297 Ga0451576_0019628
298 Ga0451576_0581073
299 Ga0451576_0753805
300 Ga0451576_1370923
301 Ga0466967_0285172
302 Ga0495667_0043750
303 Ga0496102_0144067
304 Ga0496107_0247391
305 Ga0501034_0016831
306 Ga0501034_0231657
307 Ga0501034_0510404
308 Ga0501037_0493878
309 Ga0501047_0057312
310 Ga0501047_0141323
311 Ga0501067_0263940
312 Ga0501070_0422949
313 Ga0501077_0044027
314 Ga0501080_0195065
315 Ga0501080_1004391
316 Ga0501083_0009739
317 Ga0501035_0114533
318 nmdc:mga0k408_478074_c1
319 nmdc:mga09592_421481_c1
320 nmdc:mga08y16_11735_c1
321 nmdc:mga08y16_39649_c1
322 nmdc:mga08y16_759604_c1
323 Ga0500643_001826
324 Ga0500568_0005219
325 Ga0501084_0002867
326 Ga0501084_0045756
327 Ga0501084_0265439
328 Ga0466962_0142983

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01728

FtsJ

FtsJ-like methyltransferase

23

197

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ej0-assembly1.cif.gz_A ftsj rna methyltransferase complexed with s-adenosylmethionine, mercury derivative 0.9427 26 200
8i9v-assembly1.cif.gz_CS cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - state dbp10-2 0.9312 12 199
7r7o-assembly2.cif.gz_B structure of methyltransferase domain of spb1 boudn to sam 0.9223 13 199
7o9m-assembly1.cif.gz_n human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1 and the malsu module 0.9198 13 200
8ia0-assembly1.cif.gz_CS cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - state puf6 0.917 12 201
ID Description Score Start End Superfamily
af_Q58771_22_215_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9557 21 199 3.40.50.150
af_F4JTD2_19_207_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9452 22 199 3.40.50.150
1ej0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9427 26 200 3.40.50.150
af_Q10BD5_16_233_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9387 21 199 3.40.50.150
af_Q5RJT2_23_207_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9366 23 199 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A0D2IXJ4-F1-model_v4 Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase) 0.9837 13 199 GO:0005737
GO:0008650
AF-A0A2M7IDJ8-F1-model_v4 Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase) 0.9802 14 198 GO:0005737
GO:0008650
AF-A0A2W4LUQ9-F1-model_v4 Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase) 0.9796 5 202 GO:0005737
GO:0008650
AF-A0A7Y2BFJ5-F1-model_v4 Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase) 0.9795 36 202 GO:0001510
GO:0006364
GO:0008173
AF-A0A7C0U4U3-F1-model_v4 Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.166) (23S rRNA Um2552 methyltransferase) (rRNA (uridine-2'-O-)-methyltransferase) 0.9786 17 199 GO:0005737
GO:0008650

Map