F240959

General Info

Members Datasets Scaffolds Average Seq Length
163 123 327 145

Family's Representative Sequence

Representative Sequence 3300005356|Ga0070674_101104178|Ga0070674_1011041781
Length 171
Sequence MARSLARIIRTIKLLHQKTGNMKNEPIVFERTFDAPVEKVWKAITDKNEMKKWYFDMADFKPELGAEFSFEGGKDDRVYVHLCQITELVPKKILSYSWRYRGYDGISFLHFELFPEGNSTRLKLTHEGLESFPANNPDFASDNFRAGWNEIVNVSLKKYLEESKEKVKSQN

Samples

Sample ID Description Type Environment
1 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
83 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
84 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
94 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
95 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
98 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
99 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
102 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
103 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
104 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
105 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
106 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
107 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
108 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
109 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
110 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
111 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
112 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
113 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
114 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
118 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
119 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
120 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 1.23
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.13
Nodule 0
Rhizoplane 0.61
Rhizosphere 84.66
Stem 0
Stem Tuber 0
Unclassified 14.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070674_101104178 3300005356 Bacteria 700
2 rootH1_10069980 3300003316 Bacteria 7101
3 rootH1_10069980 3300003323 Bacteria 3584
4 rootH2_10074815 3300003320 Bacteria 3838
5 rootH2_10105342 3300003320 Bacteria 2080
6 rootH2_10242017 3300003320 Bacteria 1781
7 rootH1_10292794 3300003323 Unclassified 1912
8 rootH1_10312367 3300003323 Unclassified 1024
9 Ga0058863_10395646 3300004799 Unclassified 765
10 Ga0070666_10042713 3300005335 Bacteria 3034
11 Ga0068868_100330959 3300005338 Bacteria 1300
12 Ga0070669_101050342 3300005353 Bacteria 700
13 Ga0070667_100015818 3300005367 Bacteria 6242
14 Ga0070667_100365655 3300005367 Unclassified 1308
15 Ga0070678_100038507 3300005456 Bacteria 3367
16 Ga0070681_10025699 3300005458 Bacteria 5922
17 Ga0068867_100634881 3300005459 Bacteria 935
18 Ga0068853_100286293 3300005539 Bacteria 1520
19 Ga0070665_100000008 3300005548 Bacteria 606341
20 Ga0068855_100141403 3300005563 Bacteria 2743
21 Ga0068854_100182427 3300005578 Bacteria 1640
22 Ga0068852_100133470 3300005616 Bacteria 2289
23 Ga0068859_100823565 3300005617 Bacteria 1015
24 Ga0068863_100239990 3300005841 Bacteria 1749
25 Ga0068858_100580596 3300005842 Bacteria 1086
26 Ga0068860_100101908 3300005843 Bacteria 2739
27 Ga0075366_10029852 3300006195 Bacteria 3204
28 Ga0097621_100000018 3300006237 Bacteria 88867
29 Ga0097621_101932206 3300006237 Bacteria 563
30 Ga0068871_100001846 3300006358 Bacteria 14315
31 Ga0097620_100823541 3300006931 Bacteria 1015
32 Ga0075435_100896308 3300007076 Bacteria 773
33 Ga0105240_10000767 3300009093 Bacteria 58332
34 Ga0105240_10092386 3300009093 Bacteria 3695
35 Ga0111539_10078607 3300009094 Bacteria 3881
36 Ga0111539_10339613 3300009094 Bacteria 1748
37 Ga0105247_11040697 3300009101 Unclassified 642
38 Ga0105241_10137726 3300009174 Bacteria 1984
39 Ga0105241_10159360 3300009174 Bacteria 1853
40 Ga0105242_10834376 3300009176 Bacteria 916
41 Ga0105242_12307303 3300009176 Unclassified 584
42 Ga0105248_10025311 3300009177 Bacteria 6598
43 Ga0105248_11197280 3300009177 Bacteria 859
44 Ga0105237_10010066 3300009545 Bacteria 10087
45 Ga0105237_10065873 3300009545 Bacteria 3618
46 Ga0105237_10909431 3300009545 Bacteria 887
47 Ga0105238_10027583 3300009551 Bacteria 5788
48 Ga0105249_10064335 3300009553 Bacteria 3372
49 Ga0105249_11339891 3300009553 Bacteria 787
50 Ga0105239_10015160 3300010375 Bacteria 8541
51 Ga0157373_10178441 3300013100 Bacteria 1495
52 Ga0157371_10038413 3300013102 Bacteria 3425
53 Ga0157378_10007394 3300013297 Bacteria 9595
54 Ga0157378_10125079 3300013297 Bacteria 2374
55 Ga0157378_10176019 3300013297 Bacteria 2010
56 Ga0163162_10006977 3300013306 Bacteria 10954
57 Ga0163162_10052603 3300013306 Bacteria 4090
58 Ga0157372_10560588 3300013307 Bacteria 1332
59 Ga0157372_11782047 3300013307 Bacteria 708
60 Ga0157375_10000190 3300013308 Bacteria 57567
61 Ga0157375_10217018 3300013308 Unclassified 2071
62 Ga0157380_10088775 3300014326 Unclassified 2545
63 Ga0157380_11144800 3300014326 Unclassified 819
64 Ga0157380_12754737 3300014326 Bacteria 558
65 Ga0157379_10008762 3300014968 Bacteria 8821
66 Ga0157379_10218364 3300014968 Unclassified 1727
67 Ga0157376_10002526 3300014969 Bacteria 12400
68 Ga0163161_10004795 3300017792 Bacteria 9419
69 Ga0163161_10029042 3300017792 Unclassified 3931
70 Ga0163161_10050607 3300017792 Bacteria 3007
71 Ga0163161_10439552 3300017792 Bacteria 1053
72 Ga0206356_11395046 3300020070 Bacteria 1046
73 Ga0213872_10016301 3300021361 Bacteria 3450
74 Ga0213876_10022033 3300021384 Bacteria 3370
75 Ga0207680_10030149 3300025903 Bacteria 3056
76 Ga0207705_10287983 3300025909 Bacteria 1258
77 Ga0207654_10047715 3300025911 Bacteria 2448
78 Ga0207707_10042691 3300025912 Bacteria 3957
79 Ga0207695_10000425 3300025913 Bacteria 93523
80 Ga0207695_10012488 3300025913 Bacteria 10193
81 Ga0207671_10008143 3300025914 Bacteria 8943
82 Ga0207671_10038056 3300025914 Bacteria 3566
83 Ga0207659_10038115 3300025926 Bacteria 3341
84 Ga0207644_10025010 3300025931 Bacteria 4102
85 Ga0207686_10637639 3300025934 Bacteria 842
86 Ga0207686_11181320 3300025934 Unclassified 626
87 Ga0207691_11168857 3300025940 Bacteria 639
88 Ga0207667_10130143 3300025949 Bacteria 2592
89 Ga0207712_10127229 3300025961 Unclassified 1936
90 Ga0207658_10029016 3300025986 Bacteria 3902
91 Ga0207677_10304882 3300026023 Bacteria 1317
92 Ga0207639_10100477 3300026041 Bacteria 2337
93 Ga0207639_10596108 3300026041 Bacteria 1018
94 Ga0207708_11420558 3300026075 Bacteria 609
95 Ga0207702_10110754 3300026078 Bacteria 2440
96 Ga0207702_10360842 3300026078 Bacteria 1392
97 Ga0207641_10028882 3300026088 Bacteria 4584
98 Ga0207641_10209424 3300026088 Unclassified 1802
99 Ga0207674_11242337 3300026116 Bacteria 714
100 Ga0207683_10139554 3300026121 Bacteria 2183
101 Ga0207698_10238924 3300026142 Unclassified 1654
102 Ga0209969_1035229 3300027360 Bacteria 771
103 Ga0268266_10000016 3300028379 Bacteria 629101
104 Ga0307517_10417144 3300028786 Bacteria 705
105 Ga0265327_10000055 3300031251 Bacteria 247188
106 Ga0307513_10424431 3300031456 Bacteria 1059
107 Ga0307516_10074475 3300031730 Bacteria 3251
108 Ga0373937_0627010 3300036401 Bacteria 1020
109 Ga0395899_0210915 3300037312 Bacteria 1350
110 Ga0395900_0000357 3300037418 Bacteria 66369
111 Ga0436365_0883710 3300039437 Bacteria 4395
112 Ga0436365_1318103 3300039437 Bacteria 1081
113 Ga0436361_0426503 3300039447 Bacteria 5018
114 Ga0451847_0465212 3300041503 Bacteria 891
115 Ga0451851_0296793 3300041507 Bacteria 1090
116 Ga0451577_0000379 3300042876 Bacteria 82741
117 Ga0466972_0000023 3300044658 Bacteria 192679
118 Ga0466972_0000946 3300044658 Bacteria 13963
119 Ga0453683_0000023 3300044673 Bacteria 264522
120 Ga0453683_0000195 3300044673 Bacteria 82741
121 Ga0453683_0049613 3300044673 Bacteria 2631
122 Ga0453684_0001147 3300044712 Bacteria 82741
123 Ga0453684_0269488 3300044712 Bacteria 1946
124 Ga0453684_1045591 3300044712 Bacteria 866
125 Ga0466968_0027226 3300044735 Bacteria 2352
126 Ga0466957_0799524 3300044842 Bacteria 670
127 Ga0451576_0000528 3300045051 Bacteria 82741
128 Ga0451576_0162245 3300045051 Bacteria 2333
129 Ga0451576_0317546 3300045051 Bacteria 1630
130 Ga0495596_0019366 3300046500 Bacteria 2797
131 Ga0495606_0003826 3300046507 Bacteria 15590
132 Ga0495648_0002775 3300046524 Bacteria 15798
133 Ga0495609_0408463 3300046538 Unclassified 543
134 Ga0495611_0190526 3300046648 Bacteria 957
135 Ga0495611_0531004 3300046648 Unclassified 533
136 Ga0495625_0037221 3300046660 Bacteria 3572
137 Ga0496104_0591314 3300048907 Unclassified 1020
138 Ga0501290_090083 3300049513 Bacteria 533
139 Ga0501292_017782 3300049515 Bacteria 1127
140 Ga0501071_1449200 3300049587 Bacteria 530
141 Ga0501198_038664 3300049649 Bacteria 820
142 Ga0501202_007541 3300049652 Unclassified 1969
143 Ga0501222_025056 3300049662 Unclassified 807
144 Ga0501223_011171 3300049663 Bacteria 1803
145 Ga0501243_004114 3300049675 Bacteria 2175
146 Ga0501257_004554 3300049686 Bacteria 3030
147 Ga0501259_003820 3300049688 Bacteria 2395
148 Ga0501261_024677 3300049690 Bacteria 881
149 Ga0501221_000610 3300049704 Bacteria 5701
150 Ga0501225_0003238 3300049705 Bacteria 4968
151 Ga0501245_059745 3300049708 Bacteria 694
152 Ga0501264_000153 3300049761 Bacteria 11021
153 Ga0501266_025971 3300049763 Bacteria 819
154 nmdc:mga0k408_291111_c1 3300050493 Bacteria 975
155 nmdc:mga0k408_333735_c1 3300050493 Bacteria 904
156 nmdc:mga05p37_4096_c1 3300050507 Bacteria 17035
157 nmdc:mga08y16_938933_c1 3300050511 Bacteria 849
158 Ga0500643_098297 3300053087 Unclassified 795
159 Ga0500581_319196 3300053089 Bacteria 607
160 Ga0500583_0003445 3300053092 Bacteria 4976
161 Ga0500642_0156684 3300053130 Unclassified 1068
162 Ga0500568_0018555 3300053139 Bacteria 3041
163 Ga0500616_0054705 3300053153 Unclassified 2089
164 Ga0500622_0000922 3300053156 Bacteria 24956
165 Ga0070674_101104178
166 rootH1_10069980
167 rootH2_10074815
168 rootH2_10105342
169 rootH2_10242017
170 rootH1_10292794
171 rootH1_10312367
172 Ga0058863_10395646
173 Ga0070666_10042713
174 Ga0068868_100330959
175 Ga0070669_101050342
176 Ga0070667_100015818
177 Ga0070667_100365655
178 Ga0070678_100038507
179 Ga0070681_10025699
180 Ga0068867_100634881
181 Ga0068853_100286293
182 Ga0070665_100000008
183 Ga0068855_100141403
184 Ga0068854_100182427
185 Ga0068852_100133470
186 Ga0068859_100823565
187 Ga0068863_100239990
188 Ga0068858_100580596
189 Ga0068860_100101908
190 Ga0075366_10029852
191 Ga0097621_100000018
192 Ga0097621_101932206
193 Ga0068871_100001846
194 Ga0097620_100823541
195 Ga0075435_100896308
196 Ga0105240_10000767
197 Ga0105240_10092386
198 Ga0111539_10078607
199 Ga0111539_10339613
200 Ga0105247_11040697
201 Ga0105241_10137726
202 Ga0105241_10159360
203 Ga0105242_10834376
204 Ga0105242_12307303
205 Ga0105248_10025311
206 Ga0105248_11197280
207 Ga0105237_10010066
208 Ga0105237_10065873
209 Ga0105237_10909431
210 Ga0105238_10027583
211 Ga0105249_10064335
212 Ga0105249_11339891
213 Ga0105239_10015160
214 Ga0157373_10178441
215 Ga0157371_10038413
216 Ga0157378_10007394
217 Ga0157378_10125079
218 Ga0157378_10176019
219 Ga0163162_10006977
220 Ga0163162_10052603
221 Ga0157372_10560588
222 Ga0157372_11782047
223 Ga0157375_10000190
224 Ga0157375_10217018
225 Ga0157380_10088775
226 Ga0157380_11144800
227 Ga0157380_12754737
228 Ga0157379_10008762
229 Ga0157379_10218364
230 Ga0157376_10002526
231 Ga0163161_10004795
232 Ga0163161_10029042
233 Ga0163161_10050607
234 Ga0163161_10439552
235 Ga0206356_11395046
236 Ga0213872_10016301
237 Ga0213876_10022033
238 Ga0207680_10030149
239 Ga0207705_10287983
240 Ga0207654_10047715
241 Ga0207707_10042691
242 Ga0207695_10000425
243 Ga0207695_10012488
244 Ga0207671_10008143
245 Ga0207671_10038056
246 Ga0207659_10038115
247 Ga0207644_10025010
248 Ga0207686_10637639
249 Ga0207686_11181320
250 Ga0207691_11168857
251 Ga0207667_10130143
252 Ga0207712_10127229
253 Ga0207658_10029016
254 Ga0207677_10304882
255 Ga0207639_10100477
256 Ga0207639_10596108
257 Ga0207708_11420558
258 Ga0207702_10110754
259 Ga0207702_10360842
260 Ga0207641_10028882
261 Ga0207641_10209424
262 Ga0207674_11242337
263 Ga0207683_10139554
264 Ga0207698_10238924
265 Ga0209969_1035229
266 Ga0268266_10000016
267 Ga0307517_10417144
268 Ga0265327_10000055
269 Ga0307513_10424431
270 Ga0307516_10074475
271 Ga0373937_0627010
272 Ga0395899_0210915
273 Ga0395900_0000357
274 Ga0436365_0883710
275 Ga0436365_1318103
276 Ga0436361_0426503
277 Ga0451847_0465212
278 Ga0451851_0296793
279 Ga0451577_0000379
280 Ga0466972_0000023
281 Ga0466972_0000946
282 Ga0453683_0000023
283 Ga0453683_0000195
284 Ga0453683_0049613
285 Ga0453684_0001147
286 Ga0453684_0269488
287 Ga0453684_1045591
288 Ga0466968_0027226
289 Ga0466957_0799524
290 Ga0451576_0000528
291 Ga0451576_0162245
292 Ga0451576_0317546
293 Ga0495596_0019366
294 Ga0495606_0003826
295 Ga0495648_0002775
296 Ga0495609_0408463
297 Ga0495611_0190526
298 Ga0495611_0531004
299 Ga0495625_0037221
300 Ga0496104_0591314
301 Ga0501290_090083
302 Ga0501292_017782
303 Ga0501071_1449200
304 Ga0501198_038664
305 Ga0501202_007541
306 Ga0501222_025056
307 Ga0501223_011171
308 Ga0501243_004114
309 Ga0501257_004554
310 Ga0501259_003820
311 Ga0501261_024677
312 Ga0501221_000610
313 Ga0501225_0003238
314 Ga0501245_059745
315 Ga0501264_000153
316 Ga0501266_025971
317 nmdc:mga0k408_291111_c1
318 nmdc:mga0k408_333735_c1
319 nmdc:mga05p37_4096_c1
320 nmdc:mga08y16_938933_c1
321 Ga0500643_098297
322 Ga0500581_319196
323 Ga0500583_0003445
324 Ga0500642_0156684
325 Ga0500568_0018555
326 Ga0500616_0054705
327 Ga0500622_0000922

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08327

AHSA1

Activator of Hsp90 ATPase homolog 1-like protein

34

161

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fpw-assembly3.cif.gz_B crystal structure of calu16 from micromonospora echinospora. northeast structural genomics consortium target mir12. 0.8776 7 140
6v04-assembly1.cif.gz_A dynu16 crystal structure, a putative protein in the dynemicin biosynthetic locus 0.8659 5 141
4fpw-assembly3.cif.gz_A crystal structure of calu16 from micromonospora echinospora. northeast structural genomics consortium target mir12. 0.848 7 144
3rd6-assembly2.cif.gz_A crystal structure of mll3558 protein from rhizobium loti. northeast structural genomics consortium target id mlr403 0.8457 6 139
1z94-assembly1.cif.gz_B x-ray crystal structure of protein cv1439 from chromobacterium violaceum. northeast structural genomics consortium target cvr12. 0.8434 7 138
ID Description Score Start End Superfamily
af_Q9V9Q4_218_347_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.8401 6 141 3.30.530.20
af_Q8N9S3_197_326_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.834 6 141 3.30.530.20
af_Q4E5D5_198_328_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.8306 7 141 3.30.530.20
af_Q55DB6_248_379_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.8301 6 141 3.30.530.20
af_Q93168_208_339_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.8146 3 141 3.30.530.20
ID Description Score Start End GO Terms
AF-A0A840TX59-F1-model_v4 Uncharacterized protein YndB with AHSA1/START domain 0.9967 3 139
AF-A0A3D0QBP5-F1-model_v4 SRPBCC domain-containing protein 0.9957 6 139
AF-H8KTK0-F1-model_v4 Activator of Hsp90 ATPase homologue 1/2-like C-terminal domain-containing protein 0.9933 3 141
AF-A0A1G9HHH1-F1-model_v4 Uncharacterized conserved protein YndB, AHSA1/START domain 0.993 5 141
AF-A0A537JQ64-F1-model_v4 SRPBCC domain-containing protein 0.9917 16 142

Map