F240511
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 162 | 134 | 324 | 406 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2939657138|2939657812 |
| Length | 406 |
| Sequence | NRPVVPRLPGRAPVPRVFDSSSRGLIDATPRAEASLYVCGITPYDATHLGHANTYLAFDTLVRLWTDGGYDVRYAQNVTDVDDPLLERAVATGVDWRELAAQQIELFRGDMESLRIVPPTHYVAVTDMIDEVAVAIRTLLDAGVAYRLDDGTDDIYFDNAAGATPAWTLGDESGLDRATMLVLSAERGGDPDRPGKRDALDPLLWRGPRDGEPAWESPLGVGRPGWHIECSVIAQHYLDTPITVQGGGSDLLFPHHEFSAGHAAALSGRPLADVYSHAGMVAYDGEKMSKSLGNLVLVSALTSEGTDPRAIRLALLDRHYRSDWEWTRGQLTEAQCRLGTWETWAAAAVSDDATADATLLDALRAALANDLDTPAALAAVDARIASGAPATRTDVASIDALLGIAL |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 15 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 16 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 17 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 18 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 19 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 20 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 21 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 22 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 23 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 26 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 27 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 28 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 29 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 30 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 37 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 38 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 39 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 40 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 41 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 42 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 43 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 44 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 45 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 46 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 47 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 48 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 49 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 50 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 51 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 52 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 53 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 54 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 55 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 56 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 57 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 58 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 59 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 60 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 61 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 62 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 63 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 70 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 71 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 72 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 73 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 75 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 76 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 77 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 78 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 79 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 80 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 81 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 82 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 83 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 84 | 2939657138 | Conyzicola nivalis 2857 | Isolate | Rhizosphere |
| 85 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 86 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 87 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 88 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 89 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 90 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 91 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 92 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 93 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 94 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 95 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 96 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 97 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 98 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 99 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 100 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 101 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 102 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 103 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 104 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 105 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 106 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 107 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 108 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 109 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 110 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 111 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 112 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 113 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 114 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 115 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 116 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 117 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 118 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 119 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 120 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 121 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 122 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 123 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 124 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 125 | 2966924647 | Frigoribacterium sp. 2355 | Isolate | Rhizosphere |
| 126 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 127 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 128 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 129 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 130 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 131 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 132 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 133 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 134 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 67.28 |
| Metatranscriptomes | 1.23 |
| Isolates | 31.48 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.94 |
| Nodule | 3.09 |
| Rhizoplane | 3.09 |
| Rhizosphere | 60.49 |
| Stem | 0 |
| Stem Tuber | 0.62 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10044232 | 3300003203 | Bacteria | 1543 |
| 2 | Ga0070658_10095676 | 3300005327 | Bacteria | 2452 |
| 3 | Ga0070683_100009776 | 3300005329 | Bacteria | 8218 |
| 4 | Ga0070683_100030709 | 3300005329 | Bacteria | 4881 |
| 5 | Ga0070660_100062604 | 3300005339 | Bacteria | 2891 |
| 6 | Ga0070661_100010863 | 3300005344 | Bacteria | 6341 |
| 7 | Ga0070668_100052929 | 3300005347 | Bacteria | 3130 |
| 8 | Ga0070714_100096151 | 3300005435 | Bacteria | 2602 |
| 9 | Ga0070663_100005487 | 3300005455 | Bacteria | 7539 |
| 10 | Ga0070678_100140125 | 3300005456 | Bacteria | 1934 |
| 11 | Ga0070679_100019511 | 3300005530 | Bacteria | 6594 |
| 12 | Ga0070684_100005529 | 3300005535 | Bacteria | 9699 |
| 13 | Ga0070665_100088749 | 3300005548 | Bacteria | 3098 |
| 14 | Ga0070664_100061576 | 3300005564 | Bacteria | 3199 |
| 15 | Ga0068857_100116296 | 3300005577 | Bacteria | 2406 |
| 16 | Ga0068857_100304943 | 3300005577 | Bacteria | 1468 |
| 17 | Ga0068856_100170127 | 3300005614 | Bacteria | 2191 |
| 18 | Ga0081540_1028090 | 3300005983 | Bacteria | 3169 |
| 19 | Ga0081539_10000212 | 3300005985 | Bacteria | 136183 |
| 20 | Ga0081539_10001164 | 3300005985 | Bacteria | 47583 |
| 21 | Ga0081539_10003347 | 3300005985 | Bacteria | 19904 |
| 22 | Ga0081539_10019700 | 3300005985 | Bacteria | 4603 |
| 23 | Ga0075428_100013265 | 3300006844 | Bacteria | 9168 |
| 24 | Ga0075430_100053376 | 3300006846 | Bacteria | 3403 |
| 25 | Ga0075431_100040146 | 3300006847 | Bacteria | 4822 |
| 26 | Ga0075431_100304082 | 3300006847 | Bacteria | 1611 |
| 27 | Ga0075429_100041505 | 3300006880 | Bacteria | 4007 |
| 28 | Ga0075429_100170560 | 3300006880 | Bacteria | 1906 |
| 29 | Ga0114129_10005102 | 3300009147 | Bacteria | 18495 |
| 30 | Ga0114129_10006363 | 3300009147 | Bacteria | 16742 |
| 31 | Ga0114129_10066506 | 3300009147 | Bacteria | 5028 |
| 32 | Ga0157369_10019881 | 3300013105 | Bacteria | 7512 |
| 33 | Ga0163163_10244881 | 3300014325 | Bacteria | 1843 |
| 34 | Ga0163163_10468050 | 3300014325 | Bacteria | 1321 |
| 35 | Ga0206354_10054673 | 3300020081 | Bacteria | 3259 |
| 36 | Ga0206353_10936523 | 3300020082 | Bacteria | 4350 |
| 37 | Ga0213873_10000051 | 3300021358 | Bacteria | 25926 |
| 38 | Ga0213876_10043687 | 3300021384 | Bacteria | 2369 |
| 39 | Ga0213875_10000129 | 3300021388 | Bacteria | 83647 |
| 40 | Ga0213875_10002131 | 3300021388 | Bacteria | 12092 |
| 41 | Ga0207705_10105953 | 3300025909 | Bacteria | 2073 |
| 42 | Ga0207707_10221148 | 3300025912 | Bacteria | 1648 |
| 43 | Ga0207711_10176558 | 3300025941 | Bacteria | 1941 |
| 44 | Ga0207661_10004365 | 3300025944 | Bacteria | 9911 |
| 45 | Ga0207661_10004771 | 3300025944 | Bacteria | 9492 |
| 46 | Ga0207678_10000220 | 3300026067 | Bacteria | 50961 |
| 47 | Ga0207674_10059335 | 3300026116 | Bacteria | 3872 |
| 48 | Ga0207674_10098795 | 3300026116 | Bacteria | 2902 |
| 49 | Ga0307515_10087017 | 3300028794 | Bacteria | 3974 |
| 50 | Ga0307512_10004801 | 3300030522 | Bacteria | 14517 |
| 51 | Ga0307513_10147515 | 3300031456 | Bacteria | 2268 |
| 52 | Ga0307508_10236165 | 3300031616 | Bacteria | 1426 |
| 53 | Ga0307405_10003503 | 3300031731 | Bacteria | 7224 |
| 54 | Ga0307413_10015637 | 3300031824 | Bacteria | 3896 |
| 55 | Ga0307518_10000604 | 3300031838 | Bacteria | 27338 |
| 56 | Ga0307406_10001752 | 3300031901 | Bacteria | 11899 |
| 57 | Ga0307406_10024765 | 3300031901 | Bacteria | 3588 |
| 58 | Ga0307406_10265374 | 3300031901 | Bacteria | 1301 |
| 59 | Ga0307412_10025043 | 3300031911 | Bacteria | 3691 |
| 60 | Ga0307416_100002486 | 3300032002 | Bacteria | 10600 |
| 61 | Ga0307416_100138493 | 3300032002 | Bacteria | 2207 |
| 62 | Ga0307415_100006388 | 3300032126 | Bacteria | 6350 |
| 63 | Ga0307415_100051199 | 3300032126 | Bacteria | 2801 |
| 64 | Ga0395900_0071767 | 3300037418 | Bacteria | 3560 |
| 65 | Ga0395898_0015157 | 3300037466 | Bacteria | 7912 |
| 66 | Ga0436364_0025107 | 3300037853 | Bacteria | 84205 |
| 67 | Ga0436364_1142319 | 3300037853 | Bacteria | 112398 |
| 68 | Ga0395901_0006876 | 3300038443 | Bacteria | 11492 |
| 69 | Ga0436365_0610164 | 3300039437 | Bacteria | 2969 |
| 70 | Ga0436365_1079753 | 3300039437 | Bacteria | 2145 |
| 71 | Ga0436362_0328958 | 3300039453 | Bacteria | 56155 |
| 72 | Ga0451793_0252534 | 3300041452 | Bacteria | 2481 |
| 73 | Ga0466972_0002062 | 3300044658 | Bacteria | 9846 |
| 74 | Ga0466966_0001444 | 3300044684 | Bacteria | 15268 |
| 75 | Ga0466963_0001764 | 3300044694 | Bacteria | 11796 |
| 76 | Ga0466964_0040394 | 3300044706 | Bacteria | 1884 |
| 77 | Ga0466971_0059371 | 3300044719 | Bacteria | 1727 |
| 78 | Ga0466968_0001771 | 3300044735 | Bacteria | 7784 |
| 79 | Ga0466959_0027341 | 3300045049 | Bacteria | 4232 |
| 80 | Ga0466959_0050994 | 3300045049 | Bacteria | 3037 |
| 81 | Ga0466958_0001461 | 3300045836 | Bacteria | 11238 |
| 82 | Ga0466967_0000271 | 3300045976 | Bacteria | 22858 |
| 83 | Ga0466967_0337628 | 3300045976 | Bacteria | 1456 |
| 84 | Ga0495594_0016348 | 3300046499 | Bacteria | 3909 |
| 85 | Ga0495606_0004376 | 3300046507 | Bacteria | 14162 |
| 86 | Ga0495668_0000632 | 3300046616 | Bacteria | 42377 |
| 87 | Ga0495625_0000797 | 3300046660 | Bacteria | 43641 |
| 88 | Ga0495657_0199591 | 3300046675 | Bacteria | 1220 |
| 89 | Ga0495626_0000581 | 3300048091 | Bacteria | 36264 |
| 90 | Ga0496112_0071112 | 3300048915 | Bacteria | 3439 |
| 91 | Ga0496113_0145143 | 3300048916 | Bacteria | 1869 |
| 92 | Ga0496113_0325808 | 3300048916 | Bacteria | 1232 |
| 93 | Ga0496114_0079750 | 3300048917 | Bacteria | 2764 |
| 94 | Ga0501033_0026179 | 3300049570 | Bacteria | 4391 |
| 95 | Ga0501046_0084954 | 3300049580 | Bacteria | 2440 |
| 96 | Ga0501070_0038151 | 3300049586 | Bacteria | 4009 |
| 97 | Ga0501044_0016311 | 3300049823 | Bacteria | 7980 |
| 98 | nmdc:mga05p37_15625_c1 | 3300050507 | Bacteria | 9123 |
| 99 | nmdc:mga05p37_232317_c1 | 3300050507 | Bacteria | 2221 |
| 100 | nmdc:mga05p37_449179_c1 | 3300050507 | Bacteria | 1493 |
| 101 | nmdc:mga09592_401372_c1 | 3300050508 | Bacteria | 1185 |
| 102 | nmdc:mga0qj67_204128_c1 | 3300050509 | Bacteria | 1605 |
| 103 | Ga0500643_000082 | 3300053087 | Bacteria | 101189 |
| 104 | Ga0500650_0018600 | 3300053098 | Bacteria | 3017 |
| 105 | Ga0500559_0001663 | 3300053136 | Bacteria | 12302 |
| 106 | Ga0500573_0000213 | 3300053140 | Bacteria | 23742 |
| 107 | Ga0500573_0006246 | 3300053140 | Bacteria | 6429 |
| 108 | Ga0500573_0009533 | 3300053140 | Bacteria | 5391 |
| 109 | Ga0500573_0012342 | 3300053140 | Bacteria | 4797 |
| 110 | Ga0500573_0056448 | 3300053140 | Bacteria | 2254 |
| 111 | Ga0466962_0000883 | 3300061719 | Bacteria | 13619 |
| 112 | 2939657812 | 2939657138 | Bacteria | 3740283 |
| 113 | 2515719338 | 2515154129 | Bacteria | 5584369 |
| 114 | 2515755677 | 2515154137 | Bacteria | 5711575 |
| 115 | 2516083678 | 2515154202 | Bacteria | 5471270 |
| 116 | 2516088123 | 2515154203 | Bacteria | 5458536 |
| 117 | 2586061356 | 2585427649 | Bacteria | 9053857 |
| 118 | 2623588643 | 2622736626 | Bacteria | 7181580 |
| 119 | 2772646298 | 2772190715 | Bacteria | 6959372 |
| 120 | 2795792889 | 2795385472 | Bacteria | 6627535 |
| 121 | 2809589551 | 2808606522 | Bacteria | 9488490 |
| 122 | 2831935998 | 2831935698 | Bacteria | 5963223 |
| 123 | 2832009373 | 2832004796 | Bacteria | 6538017 |
| 124 | 2855673466 | 2855670206 | Bacteria | 7120389 |
| 125 | 2855680288 | 2855676851 | Bacteria | 7063653 |
| 126 | 2856862611 | 2856858025 | Bacteria | 7255264 |
| 127 | 2857290557 | 2857288857 | Bacteria | 7189066 |
| 128 | 2858852595 | 2858848962 | Bacteria | 6963058 |
| 129 | 2858875083 | 2858868258 | Bacteria | 7683772 |
| 130 | 2858885709 | 2858882152 | Bacteria | 7230291 |
| 131 | 2858892518 | 2858888857 | Bacteria | 7060307 |
| 132 | 2858897253 | 2858895516 | Bacteria | 7378898 |
| 133 | 2858904429 | 2858902515 | Bacteria | 7086037 |
| 134 | 2866066908 | 2866065130 | Bacteria | 6518152 |
| 135 | 2866617480 | 2866612099 | Bacteria | 7543886 |
| 136 | 2867303297 | 2867302475 | Bacteria | 7087181 |
| 137 | 2867317849 | 2867312974 | Bacteria | 7058875 |
| 138 | 2867319544 | 2867319477 | Bacteria | 7069771 |
| 139 | 2867507688 | 2867507094 | Bacteria | 6506033 |
| 140 | 2869053062 | 2869048445 | Bacteria | 6875584 |
| 141 | 2869067224 | 2869061728 | Bacteria | 7112407 |
| 142 | 2869074472 | 2869068681 | Bacteria | 7205615 |
| 143 | 2880491575 | 2880489317 | Bacteria | 7096270 |
| 144 | 2880500900 | 2880495981 | Bacteria | 7340502 |
| 145 | 2887483442 | 2887478801 | Bacteria | 8972725 |
| 146 | 2899368676 | 2899359706 | Bacteria | 10940472 |
| 147 | 2899370842 | 2899370129 | Bacteria | 6781179 |
| 148 | 2902585529 | 2902582711 | Bacteria | 6187705 |
| 149 | 2915769566 | 2915768154 | Bacteria | 8424322 |
| 150 | 2917737905 | 2917736166 | Bacteria | 9690793 |
| 151 | 2929223076 | 2929219909 | Bacteria | 6984360 |
| 152 | 2929229413 | 2929226422 | Bacteria | 7248583 |
| 153 | 2966924765 | 2966924647 | Bacteria | 3268643 |
| 154 | 2996223301 | 2996221748 | Bacteria | 6799777 |
| 155 | 649815604 | 649633069 | Bacteria | 6962533 |
| 156 | 8001784444 | 8001781756 | Bacteria | 9586736 |
| 157 | 8003323555 | 8003314358 | Bacteria | 10575343 |
| 158 | 8003831412 | 8003830390 | Bacteria | 6541657 |
| 159 | 8003859928 | 8003856774 | Bacteria | 7675274 |
| 160 | 8054710494 | 8054704163 | Bacteria | 7247792 |
| 161 | 8054732675 | 8054727385 | Bacteria | 7558670 |
| 162 | 8054737822 | 8054734606 | Bacteria | 6947278 |
| 163 | JGI25406J46586_10044232 | |||
| 164 | Ga0070658_10095676 | |||
| 165 | Ga0070683_100009776 | |||
| 166 | Ga0070683_100030709 | |||
| 167 | Ga0070660_100062604 | |||
| 168 | Ga0070661_100010863 | |||
| 169 | Ga0070668_100052929 | |||
| 170 | Ga0070714_100096151 | |||
| 171 | Ga0070663_100005487 | |||
| 172 | Ga0070678_100140125 | |||
| 173 | Ga0070679_100019511 | |||
| 174 | Ga0070684_100005529 | |||
| 175 | Ga0070665_100088749 | |||
| 176 | Ga0070664_100061576 | |||
| 177 | Ga0068857_100116296 | |||
| 178 | Ga0068857_100304943 | |||
| 179 | Ga0068856_100170127 | |||
| 180 | Ga0081540_1028090 | |||
| 181 | Ga0081539_10000212 | |||
| 182 | Ga0081539_10001164 | |||
| 183 | Ga0081539_10003347 | |||
| 184 | Ga0081539_10019700 | |||
| 185 | Ga0075428_100013265 | |||
| 186 | Ga0075430_100053376 | |||
| 187 | Ga0075431_100040146 | |||
| 188 | Ga0075431_100304082 | |||
| 189 | Ga0075429_100041505 | |||
| 190 | Ga0075429_100170560 | |||
| 191 | Ga0114129_10005102 | |||
| 192 | Ga0114129_10006363 | |||
| 193 | Ga0114129_10066506 | |||
| 194 | Ga0157369_10019881 | |||
| 195 | Ga0163163_10244881 | |||
| 196 | Ga0163163_10468050 | |||
| 197 | Ga0206354_10054673 | |||
| 198 | Ga0206353_10936523 | |||
| 199 | Ga0213873_10000051 | |||
| 200 | Ga0213876_10043687 | |||
| 201 | Ga0213875_10000129 | |||
| 202 | Ga0213875_10002131 | |||
| 203 | Ga0207705_10105953 | |||
| 204 | Ga0207707_10221148 | |||
| 205 | Ga0207711_10176558 | |||
| 206 | Ga0207661_10004365 | |||
| 207 | Ga0207661_10004771 | |||
| 208 | Ga0207678_10000220 | |||
| 209 | Ga0207674_10059335 | |||
| 210 | Ga0207674_10098795 | |||
| 211 | Ga0307515_10087017 | |||
| 212 | Ga0307512_10004801 | |||
| 213 | Ga0307513_10147515 | |||
| 214 | Ga0307508_10236165 | |||
| 215 | Ga0307405_10003503 | |||
| 216 | Ga0307413_10015637 | |||
| 217 | Ga0307518_10000604 | |||
| 218 | Ga0307406_10001752 | |||
| 219 | Ga0307406_10024765 | |||
| 220 | Ga0307406_10265374 | |||
| 221 | Ga0307412_10025043 | |||
| 222 | Ga0307416_100002486 | |||
| 223 | Ga0307416_100138493 | |||
| 224 | Ga0307415_100006388 | |||
| 225 | Ga0307415_100051199 | |||
| 226 | Ga0395900_0071767 | |||
| 227 | Ga0395898_0015157 | |||
| 228 | Ga0436364_0025107 | |||
| 229 | Ga0436364_1142319 | |||
| 230 | Ga0395901_0006876 | |||
| 231 | Ga0436365_0610164 | |||
| 232 | Ga0436365_1079753 | |||
| 233 | Ga0436362_0328958 | |||
| 234 | Ga0451793_0252534 | |||
| 235 | Ga0466972_0002062 | |||
| 236 | Ga0466966_0001444 | |||
| 237 | Ga0466963_0001764 | |||
| 238 | Ga0466964_0040394 | |||
| 239 | Ga0466971_0059371 | |||
| 240 | Ga0466968_0001771 | |||
| 241 | Ga0466959_0027341 | |||
| 242 | Ga0466959_0050994 | |||
| 243 | Ga0466958_0001461 | |||
| 244 | Ga0466967_0000271 | |||
| 245 | Ga0466967_0337628 | |||
| 246 | Ga0495594_0016348 | |||
| 247 | Ga0495606_0004376 | |||
| 248 | Ga0495668_0000632 | |||
| 249 | Ga0495625_0000797 | |||
| 250 | Ga0495657_0199591 | |||
| 251 | Ga0495626_0000581 | |||
| 252 | Ga0496112_0071112 | |||
| 253 | Ga0496113_0145143 | |||
| 254 | Ga0496113_0325808 | |||
| 255 | Ga0496114_0079750 | |||
| 256 | Ga0501033_0026179 | |||
| 257 | Ga0501046_0084954 | |||
| 258 | Ga0501070_0038151 | |||
| 259 | Ga0501044_0016311 | |||
| 260 | nmdc:mga05p37_15625_c1 | |||
| 261 | nmdc:mga05p37_232317_c1 | |||
| 262 | nmdc:mga05p37_449179_c1 | |||
| 263 | nmdc:mga09592_401372_c1 | |||
| 264 | nmdc:mga0qj67_204128_c1 | |||
| 265 | Ga0500643_000082 | |||
| 266 | Ga0500650_0018600 | |||
| 267 | Ga0500559_0001663 | |||
| 268 | Ga0500573_0000213 | |||
| 269 | Ga0500573_0006246 | |||
| 270 | Ga0500573_0009533 | |||
| 271 | Ga0500573_0012342 | |||
| 272 | Ga0500573_0056448 | |||
| 273 | Ga0466962_0000883 | |||
| 274 | 2939657812 | |||
| 275 | 2515719338 | |||
| 276 | 2515755677 | |||
| 277 | 2516083678 | |||
| 278 | 2516088123 | |||
| 279 | 2586061356 | |||
| 280 | 2623588643 | |||
| 281 | 2772646298 | |||
| 282 | 2795792889 | |||
| 283 | 2809589551 | |||
| 284 | 2831935998 | |||
| 285 | 2832009373 | |||
| 286 | 2855673466 | |||
| 287 | 2855680288 | |||
| 288 | 2856862611 | |||
| 289 | 2857290557 | |||
| 290 | 2858852595 | |||
| 291 | 2858875083 | |||
| 292 | 2858885709 | |||
| 293 | 2858892518 | |||
| 294 | 2858897253 | |||
| 295 | 2858904429 | |||
| 296 | 2866066908 | |||
| 297 | 2866617480 | |||
| 298 | 2867303297 | |||
| 299 | 2867317849 | |||
| 300 | 2867319544 | |||
| 301 | 2867507688 | |||
| 302 | 2869053062 | |||
| 303 | 2869067224 | |||
| 304 | 2869074472 | |||
| 305 | 2880491575 | |||
| 306 | 2880500900 | |||
| 307 | 2887483442 | |||
| 308 | 2899368676 | |||
| 309 | 2899370842 | |||
| 310 | 2902585529 | |||
| 311 | 2915769566 | |||
| 312 | 2917737905 | |||
| 313 | 2929223076 | |||
| 314 | 2929229413 | |||
| 315 | 2966924765 | |||
| 316 | 2996223301 | |||
| 317 | 649815604 | |||
| 318 | 8001784444 | |||
| 319 | 8003323555 | |||
| 320 | 8003831412 | |||
| 321 | 8003859928 | |||
| 322 | 8054710494 | |||
| 323 | 8054732675 | |||
| 324 | 8054737822 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8hfo-assembly1.cif.gz_A | crystal structure of mycobacterium smegmatis mshc in complex with compound 7d | 0.9508 | 1 | 397 |
| 8hfo-assembly1.cif.gz_A | crystal structure of mycobacterium smegmatis mshc in complex with compound 7d | 0.9484 | 1 | 397 |
| 3c8z-assembly1.cif.gz_A | the 1.6 a crystal structure of mshc: the rate limiting enzyme in the mycothiol biosynthetic pathway | 0.9178 | 1 | 397 |
| 8hfm-assembly1.cif.gz_A | crystal structure of mycobacterium smegmatis mshc | 0.9177 | 1 | 397 |
| 3c8z-assembly1.cif.gz_A | the 1.6 a crystal structure of mshc: the rate limiting enzyme in the mycothiol biosynthetic pathway | 0.9155 | 1 | 397 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3c8zA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9832 | 1 | 329 | 3.40.50.620 |
| 3c8zA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9802 | 1 | 329 | 3.40.50.620 |
| af_P9WFW1_1_304_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9373 | 18 | 325 | 3.40.50.620 |
| 1li7A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.932 | 35 | 329 | 3.40.50.620 |
| af_Q2G2M6_1_304_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9314 | 19 | 329 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q4D2X0-F1-model_v4 | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (EC 6.3.1.13) (Mycothiol ligase) | 0.9852 | 1 | 331 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 GO:0010125 GO:0035446 |
| AF-A0A7K2N449-F1-model_v4 | Cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase | 0.9805 | 1 | 223 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 |
| AF-A0A7C6Y9A8-F1-model_v4 | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (EC 6.3.1.13) (Mycothiol ligase) | 0.9802 | 1 | 338 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 GO:0010125 GO:0035446 |
| AF-A0A4Q4D2X0-F1-model_v4 | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase (EC 6.3.1.13) (Mycothiol ligase) | 0.9792 | 1 | 331 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 GO:0010125 GO:0035446 |
| AF-A0A7K2N449-F1-model_v4 | Cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase | 0.9762 | 1 | 223 |
GO:0004817
GO:0005524 GO:0005829 GO:0006423 |