F237611

General Info

Members Datasets Scaffolds Average Seq Length
161 128 322 872

Family's Representative Sequence

Representative Sequence 3300045836|Ga0466958_0015240|Ga0466958_0015240_1439_4291
Length 950
Sequence MAQTLAEQTPGQQTDKKWVYLFQEGSAGMRDLLGGKGAGVAEMTRAGLPVPPGFTITTEACNAYYSEGQQFPQGLWEQATEALKDIESKTGRGFGDRSNPLLVSVRSGAKFSMPGMMDTVLNLGLNDDTTQGLAQQSNDERFAYDAYRRFIQMFGKIVLDIDPDLFEHALDAKKEKTGARSDADLSVDSLKQLVDQFKSIVQQQTGQGFPTDPYQQLKEAIAAVFRSWNGARARAYREAEGIAHDLGTAVNVQAMVFGNMGAESGTGVAFTRNPSTGENKLYGEYLLNAQGEDVVAGIRTPQPISTLQNDMPEAYQQFQDIAHRMETHYRDMQDLEFTIERGKLYMLQTRNGKRTAAAAVKIAVDMVNAGTISKEEALLRIDPKHVVQLLLPRFDDDARAEALSGDSLLVKGLNASPGAAVGKVVFDADRAAQQGNNGESVILVRPETSPDDVHGMIAAKGILTARGGATSHAAVVARGMGKPCVAGAESLTVDLANRQMTANGKTVKEGEVISLDGATGEVFVGAIETIAPKFSEDSDLAQVLHWADDIRRLQVWANADYPRDAERAREYGAQGIGLCRTEHMFFEEERLPIVHQMILNADEAARLETELTQIEEEAARSGRQDPKLQERLGAARQRADNSDALKQYRDALDKLLPIQKEDFRGVLKAMQGLPVVIRLIDPPLHEFLPGYAELIEEVTELRVRGNDPEELKRKEELLRAVSRMHEQNPMLGLRGIRLGILHPGIIDMQVRAILTAAVELEREGIHVKPEIMVPLVGTENEMKFARERIEKIAGEVLADAGVELEYKIGTMIEVPRAALTADQIAQDAEFFSFGTNDLTQTTFGYSRDDAEGKFLLKYVEMGILPTNPFQELDREGVGRLMQIAVKDGRGARSELEIGICGEHGGDPSSIEFCNSIGLNYVSCSPFRVPVARLAAAQSVIAENATKSDTR

Samples

Sample ID Description Type Environment
1 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
55 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
56 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
74 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
75 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
76 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
77 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
105 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
109 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
110 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
114 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
117 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
123 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
124 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
128 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.65
Metatranscriptomes 3.11
Isolates 1.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.73
Nodule 0
Rhizoplane 13.04
Rhizosphere 78.88
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466958_0015240 3300045836 Bacteria 4402
2 JGI24743J22301_10000926 3300001991 Bacteria 3772
3 JGI24738J21930_10004529 3300002075 Bacteria 3396
4 JGI25406J46586_10003622 3300003203 Bacteria 7246
5 Ga0070683_100000351 3300005329 Bacteria 31718
6 Ga0068869_100026798 3300005334 Bacteria 4014
7 Ga0070682_100019140 3300005337 Bacteria 4012
8 Ga0070692_10001089 3300005345 Bacteria 9444
9 Ga0070659_100001249 3300005366 Bacteria 18455
10 Ga0070709_10000185 3300005434 Bacteria 39684
11 Ga0070714_100001003 3300005435 Bacteria 20120
12 Ga0070714_100009262 3300005435 Bacteria 7737
13 Ga0070714_100044858 3300005435 Bacteria 3744
14 Ga0070713_100000253 3300005436 Bacteria 35204
15 Ga0070681_10003209 3300005458 Bacteria 15238
16 Ga0068867_100008339 3300005459 Bacteria 7314
17 Ga0070684_100000158 3300005535 Bacteria 46141
18 Ga0070702_100014335 3300005615 Bacteria 4020
19 Ga0068852_100015089 3300005616 Bacteria 5977
20 Ga0068870_10002066 3300005840 Bacteria 8308
21 Ga0068860_100004081 3300005843 Bacteria 14986
22 Ga0068860_100012632 3300005843 Bacteria 8310
23 Ga0081455_10004425 3300005937 Bacteria 15771
24 Ga0081539_10000509 3300005985 Bacteria 80756
25 Ga0075365_10001625 3300006038 Bacteria 10374
26 Ga0075428_100001236 3300006844 Bacteria 27303
27 Ga0075428_100006381 3300006844 Bacteria 13126
28 Ga0075430_100000360 3300006846 Bacteria 33318
29 Ga0075431_100001814 3300006847 Bacteria 20155
30 Ga0075429_100001274 3300006880 Bacteria 20509
31 Ga0111539_10012446 3300009094 Bacteria 10666
32 Ga0111539_10025540 3300009094 Bacteria 7242
33 Ga0111539_10026548 3300009094 Bacteria 7079
34 Ga0105243_10012065 3300009148 Bacteria 6533
35 Ga0105237_10048533 3300009545 Bacteria 4268
36 Ga0105249_10025761 3300009553 Bacteria 5297
37 Ga0157369_10000361 3300013105 Bacteria 60611
38 Ga0157369_10005454 3300013105 Bacteria 14790
39 Ga0157378_10013435 3300013297 Bacteria 7158
40 Ga0163163_10033369 3300014325 Bacteria 4979
41 Ga0157380_10006010 3300014326 Bacteria 8501
42 Ga0157379_10006082 3300014968 Bacteria 10390
43 Ga0157379_10060602 3300014968 Bacteria 3383
44 Ga0163161_10007513 3300017792 Bacteria 7533
45 Ga0197907_11455991 3300020069 Bacteria 2947
46 Ga0213876_10003379 3300021384 Bacteria 9133
47 Ga0224712_10001093 3300022467 Bacteria 5985
48 Ga0207699_10000034 3300025906 Bacteria 134405
49 Ga0207643_10002070 3300025908 Bacteria 11056
50 Ga0207671_10025694 3300025914 Bacteria 4420
51 Ga0207700_10000501 3300025928 Bacteria 22924
52 Ga0207700_10004809 3300025928 Bacteria 8017
53 Ga0207664_10000540 3300025929 Bacteria 26913
54 Ga0207664_10014462 3300025929 Bacteria 5699
55 Ga0207690_10000939 3300025932 Bacteria 18660
56 Ga0207704_10035695 3300025938 Bacteria 2852
57 Ga0207691_10014861 3300025940 Bacteria 7419
58 Ga0207689_10050985 3300025942 Bacteria 3411
59 Ga0207661_10006938 3300025944 Bacteria 8034
60 Ga0207679_10042969 3300025945 Bacteria 3251
61 Ga0207708_10001356 3300026075 Bacteria 18391
62 Ga0207708_10003862 3300026075 Bacteria 11028
63 Ga0207675_100015375 3300026118 Bacteria 7137
64 Ga0207675_100037254 3300026118 Bacteria 4538
65 Ga0268264_10019045 3300028381 Bacteria 5612
66 Ga0316579_10003771 3300031691 Bacteria 5967
67 Ga0316576_10026920 3300031727 Bacteria 4039
68 Ga0316576_10032202 3300031727 Bacteria 3725
69 Ga0316578_10000516 3300031728 Bacteria 13128
70 Ga0316578_10013244 3300031728 Bacteria 4369
71 Ga0307416_100014454 3300032002 Bacteria 5414
72 Ga0316593_10003283 3300032168 Bacteria 3988
73 Ga0316593_10003598 3300032168 Bacteria 3873
74 Ga0316587_1001820 3300033529 Bacteria 2731
75 Ga0316584_0010647 3300036712 Bacteria 6437
76 Ga0316584_0032797 3300036712 Bacteria 3844
77 Ga0373925_0000183 3300037068 Bacteria 68921
78 Ga0395900_0004995 3300037418 Bacteria 13933
79 Ga0395905_0013167 3300037471 Bacteria 7938
80 Ga0395901_0021927 3300038443 Bacteria 6547
81 Ga0436365_1919595 3300039437 Bacteria 19073
82 Ga0466969_0001299 3300044656 Bacteria 13465
83 Ga0466960_0005497 3300044901 Bacteria 5024
84 Ga0466958_0003568 3300045836 Bacteria 8098
85 Ga0466958_0004063 3300045836 Bacteria 7676
86 Ga0495629_0000005 3300046459 Bacteria 404868
87 Ga0495653_0038220 3300046463 Bacteria 3768
88 Ga0495639_0003557 3300046475 Bacteria 6721
89 Ga0495666_0000024 3300046526 Bacteria 57339
90 Ga0495586_0000307 3300046535 Bacteria 30983
91 Ga0495635_0000647 3300046663 Bacteria 22370
92 Ga0495600_0005503 3300046809 Bacteria 7643
93 Ga0495680_0000860 3300047322 Bacteria 33775
94 Ga0496100_0005400 3300048903 Bacteria 6880
95 Ga0496100_0012492 3300048903 Bacteria 4872
96 Ga0496101_0002368 3300048904 Bacteria 11567
97 Ga0496101_0047069 3300048904 Bacteria 3095
98 Ga0496102_0040696 3300048905 Bacteria 4205
99 Ga0496103_0011871 3300048906 Bacteria 5170
100 Ga0496104_0005374 3300048907 Bacteria 11214
101 Ga0496105_0003753 3300048908 Bacteria 11318
102 Ga0496106_0032959 3300048909 Bacteria 3863
103 Ga0496107_0019135 3300048910 Bacteria 4830
104 Ga0496108_0003240 3300048911 Bacteria 13088
105 Ga0496108_0013366 3300048911 Bacteria 6693
106 Ga0496109_0000578 3300048912 Bacteria 30715
107 Ga0496110_0006333 3300048913 Bacteria 9352
108 Ga0496110_0009998 3300048913 Bacteria 7696
109 Ga0496110_0043542 3300048913 Bacteria 3919
110 Ga0496111_0025843 3300048914 Bacteria 4143
111 Ga0496111_0042980 3300048914 Bacteria 3246
112 Ga0496113_0095565 3300048916 Bacteria 2297
113 Ga0496114_0002148 3300048917 Bacteria 14996
114 Ga0496114_0004903 3300048917 Bacteria 10424
115 Ga0496122_0001148 3300048925 Bacteria 45381
116 Ga0496123_0000948 3300048926 Bacteria 45175
117 Ga0496124_0000497 3300048927 Bacteria 67498
118 Ga0496126_0031607 3300048929 Bacteria 4997
119 Ga0501031_0001799 3300049568 Bacteria 13460
120 Ga0501031_0019497 3300049568 Bacteria 4419
121 Ga0501031_0021347 3300049568 Bacteria 4222
122 Ga0501034_0051367 3300049571 Bacteria 4157
123 Ga0501036_0011255 3300049572 Bacteria 7402
124 Ga0501040_0000851 3300049576 Bacteria 19154
125 Ga0501040_0003454 3300049576 Bacteria 10197
126 Ga0501042_0013670 3300049578 Bacteria 5527
127 Ga0501046_0008361 3300049580 Bacteria 9025
128 Ga0501067_0020081 3300049583 Bacteria 3696
129 Ga0501068_0012104 3300049584 Bacteria 4882
130 Ga0501068_0013595 3300049584 Bacteria 4635
131 Ga0501069_0000036 3300049585 Bacteria 86365
132 Ga0501070_0000001 3300049586 Bacteria 519187
133 Ga0501070_0032870 3300049586 Bacteria 4339
134 Ga0501071_0003009 3300049587 Bacteria 10431
135 Ga0501072_0016308 3300049588 Bacteria 5699
136 Ga0501073_0030930 3300049589 Bacteria 3821
137 Ga0501076_0019410 3300049592 Bacteria 5197
138 Ga0501079_0010413 3300049741 Bacteria 7069
139 Ga0501080_0002023 3300049742 Bacteria 17528
140 Ga0501081_0005680 3300049743 Bacteria 8073
141 Ga0501035_0026643 3300049822 Bacteria 5288
142 Ga0501044_0012444 3300049823 Bacteria 9214
143 nmdc:mga00v17_4733_c1 3300050491 Bacteria 7115
144 nmdc:mga00v17_6196_c1 3300050491 Bacteria 6342
145 nmdc:mga0yw44_22697_c1 3300050492 Bacteria 3523
146 nmdc:mga05p37_957_c1 3300050507 Bacteria 7222
147 nmdc:mga09592_4934_c1 3300050508 Bacteria 10819
148 nmdc:mga09592_70509_c1 3300050508 Bacteria 2966
149 nmdc:mga0qj67_7840_c1 3300050509 Bacteria 7887
150 nmdc:mga06r32_3094_c1 3300050510 Bacteria 14896
151 nmdc:mga08y16_14021_c1 3300050511 Bacteria 8436
152 nmdc:mga08y16_21663_c1 3300050511 Bacteria 6784
153 nmdc:mga0n895_38333_c1 3300050512 Bacteria 4642
154 nmdc:mga0rr50_58582_c1 3300050513 Bacteria 2887
155 Ga0500566_0020689 3300053094 Bacteria 3869
156 Ga0500616_0000820 3300053153 Bacteria 35228
157 Ga0501084_0004248 3300054114 Bacteria 11660
158 Ga0501082_0009906 3300060353 Bacteria 8214
159 Ga0530510_0008675 3300061734 Bacteria 7105
160 2812364807 2811994880 Bacteria 4147780
161 2884995901 2884994152 Bacteria 4492978
162 Ga0466958_0015240
163 JGI24743J22301_10000926
164 JGI24738J21930_10004529
165 JGI25406J46586_10003622
166 Ga0070683_100000351
167 Ga0068869_100026798
168 Ga0070682_100019140
169 Ga0070692_10001089
170 Ga0070659_100001249
171 Ga0070709_10000185
172 Ga0070714_100001003
173 Ga0070714_100009262
174 Ga0070714_100044858
175 Ga0070713_100000253
176 Ga0070681_10003209
177 Ga0068867_100008339
178 Ga0070684_100000158
179 Ga0070702_100014335
180 Ga0068852_100015089
181 Ga0068870_10002066
182 Ga0068860_100004081
183 Ga0068860_100012632
184 Ga0081455_10004425
185 Ga0081539_10000509
186 Ga0075365_10001625
187 Ga0075428_100001236
188 Ga0075428_100006381
189 Ga0075430_100000360
190 Ga0075431_100001814
191 Ga0075429_100001274
192 Ga0111539_10012446
193 Ga0111539_10025540
194 Ga0111539_10026548
195 Ga0105243_10012065
196 Ga0105237_10048533
197 Ga0105249_10025761
198 Ga0157369_10000361
199 Ga0157369_10005454
200 Ga0157378_10013435
201 Ga0163163_10033369
202 Ga0157380_10006010
203 Ga0157379_10006082
204 Ga0157379_10060602
205 Ga0163161_10007513
206 Ga0197907_11455991
207 Ga0213876_10003379
208 Ga0224712_10001093
209 Ga0207699_10000034
210 Ga0207643_10002070
211 Ga0207671_10025694
212 Ga0207700_10000501
213 Ga0207700_10004809
214 Ga0207664_10000540
215 Ga0207664_10014462
216 Ga0207690_10000939
217 Ga0207704_10035695
218 Ga0207691_10014861
219 Ga0207689_10050985
220 Ga0207661_10006938
221 Ga0207679_10042969
222 Ga0207708_10001356
223 Ga0207708_10003862
224 Ga0207675_100015375
225 Ga0207675_100037254
226 Ga0268264_10019045
227 Ga0316579_10003771
228 Ga0316576_10026920
229 Ga0316576_10032202
230 Ga0316578_10000516
231 Ga0316578_10013244
232 Ga0307416_100014454
233 Ga0316593_10003283
234 Ga0316593_10003598
235 Ga0316587_1001820
236 Ga0316584_0010647
237 Ga0316584_0032797
238 Ga0373925_0000183
239 Ga0395900_0004995
240 Ga0395905_0013167
241 Ga0395901_0021927
242 Ga0436365_1919595
243 Ga0466969_0001299
244 Ga0466960_0005497
245 Ga0466958_0003568
246 Ga0466958_0004063
247 Ga0495629_0000005
248 Ga0495653_0038220
249 Ga0495639_0003557
250 Ga0495666_0000024
251 Ga0495586_0000307
252 Ga0495635_0000647
253 Ga0495600_0005503
254 Ga0495680_0000860
255 Ga0496100_0005400
256 Ga0496100_0012492
257 Ga0496101_0002368
258 Ga0496101_0047069
259 Ga0496102_0040696
260 Ga0496103_0011871
261 Ga0496104_0005374
262 Ga0496105_0003753
263 Ga0496106_0032959
264 Ga0496107_0019135
265 Ga0496108_0003240
266 Ga0496108_0013366
267 Ga0496109_0000578
268 Ga0496110_0006333
269 Ga0496110_0009998
270 Ga0496110_0043542
271 Ga0496111_0025843
272 Ga0496111_0042980
273 Ga0496113_0095565
274 Ga0496114_0002148
275 Ga0496114_0004903
276 Ga0496122_0001148
277 Ga0496123_0000948
278 Ga0496124_0000497
279 Ga0496126_0031607
280 Ga0501031_0001799
281 Ga0501031_0019497
282 Ga0501031_0021347
283 Ga0501034_0051367
284 Ga0501036_0011255
285 Ga0501040_0000851
286 Ga0501040_0003454
287 Ga0501042_0013670
288 Ga0501046_0008361
289 Ga0501067_0020081
290 Ga0501068_0012104
291 Ga0501068_0013595
292 Ga0501069_0000036
293 Ga0501070_0000001
294 Ga0501070_0032870
295 Ga0501071_0003009
296 Ga0501072_0016308
297 Ga0501073_0030930
298 Ga0501076_0019410
299 Ga0501079_0010413
300 Ga0501080_0002023
301 Ga0501081_0005680
302 Ga0501035_0026643
303 Ga0501044_0012444
304 nmdc:mga00v17_4733_c1
305 nmdc:mga00v17_6196_c1
306 nmdc:mga0yw44_22697_c1
307 nmdc:mga05p37_957_c1
308 nmdc:mga09592_4934_c1
309 nmdc:mga09592_70509_c1
310 nmdc:mga0qj67_7840_c1
311 nmdc:mga06r32_3094_c1
312 nmdc:mga08y16_14021_c1
313 nmdc:mga08y16_21663_c1
314 nmdc:mga0n895_38333_c1
315 nmdc:mga0rr50_58582_c1
316 Ga0500566_0020689
317 Ga0500616_0000820
318 Ga0501084_0004248
319 Ga0501082_0009906
320 Ga0530510_0008675
321 2812364807
322 2884995901

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00391

PEP-utilizers

PEP-utilising enzyme, mobile domain

437

520

0.97

PF02896

PEP-utilizers_C

PEP-utilising enzyme, PEP-binding domain

535

940

0.96

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

308

371

0.91

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

67

314

0.9

PF01326

PPDK_N

Pyruvate phosphate dikinase, AMP/ATP-binding domain

30

89

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fm4-assembly1.cif.gz_A nmr structure of the phosphoryl carrier domain of pyruvate phosphate dikinase 0.9053 385 508
5jvl-assembly2.cif.gz_B c4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue 0.903 257 885
5jvl-assembly2.cif.gz_B c4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue 0.898 257 885
5jvl-assembly1.cif.gz_D c4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue 0.8775 5 884
5jvl-assembly1.cif.gz_D c4-type pyruvate phospate dikinase: nucleotide binding domain with bound atp analogue 0.8746 5 884
ID Description Score Start End Superfamily
af_O06579_211_308_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9793 243 340 3.30.470.20
1kblA05 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.9707 112 197 1.20.80.30
af_O06579_211_308_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9696 243 340 3.30.470.20
1kc7A05 Mainly Alpha;Up-down Bundle;Acyl-CoA Binding Protein; 0.966 112 197 1.20.80.30
2x0sA05 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;Phosphohistidine domain 0.9651 389 504 3.50.30.10
ID Description Score Start End GO Terms
AF-A0A6B3EU47-F1-model_v4 Pyruvate, phosphate dikinase (Pyruvate, orthophosphate dikinase) 0.9945 694 808 GO:0006090
GO:0016301
GO:0050242
AF-A0A7X7E6Y3-F1-model_v4 Pyruvate, phosphate dikinase (EC 2.7.9.1) 0.9941 3 109 GO:0005524
GO:0006090
GO:0016301
GO:0050242
AF-A0A397Q5E3-F1-model_v4 deleted 0.9921 1 125
AF-A0A2N8FL70-F1-model_v4 deleted 0.9918 390 482
AF-A0A7I8I931-F1-model_v4 Pyruvate phosphate dikinase AMP/ATP-binding domain-containing protein 0.9902 19 148 GO:0005524
GO:0006090
GO:0016301
GO:0050242

Map