F235537
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 160 | 122 | 320 | 353 |
Family's Representative Sequence
| Representative Sequence | 3300049130|Ga0501310_000568|Ga0501310_000568_117_1310 |
| Length | 397 |
| Sequence | MLAAWGRTHIAKAGRLGSGPALGPQILRNATDMPFAPEPPHRHGVAPAGPDTAVLLCNLGTPDAPTAPALRRYLAQFLADPRVVEIPRLVWLLILHGVILRIRPAKSAAKYTTVWTPEGSPLKVWTAKQAKLLQGMLGERGLLVRVAMAMRYGEPAIAATLDALKREGVRRVLVLPAYPQYSGATTASVVDDVARWTLKTRHLPELRFVNRYHDDPAYIAALAQTVREHWQRDGRGDKLVMSFHGMPERTLHLGDPYHCECLKTGRLLAAALGLKDGEWLVTVQSRFGKAKWLSPYTEPSLVELAQGGLKSVDVICPGFSADCLETLEEISQEARAAFLAAGGQRFGYIACLNDHPAGMRALAGLAERHLQGWPMAAPHPDTLALQRQRALAAGARE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049130 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 2 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 6 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 9 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 10 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 11 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 12 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 13 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 14 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 15 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 16 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 17 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 18 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 19 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 25 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 26 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 27 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 39 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 40 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 41 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 42 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 43 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 44 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 45 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 46 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 47 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 48 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 49 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 50 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 51 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 52 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 53 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 54 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 55 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 56 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 57 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 58 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 59 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 60 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 61 | 3300042115 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 | Metagenome | Rhizosphere |
| 62 | 3300042120 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 | Metagenome | Rhizosphere |
| 63 | 3300042126 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 | Metagenome | Rhizosphere |
| 64 | 3300042129 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 | Metagenome | Rhizosphere |
| 65 | 3300042130 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 | Metagenome | Rhizosphere |
| 66 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 67 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 68 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 69 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 70 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 71 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 72 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 73 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 74 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 90 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 91 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 92 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 93 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 94 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 95 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 96 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 97 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 98 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 99 | 3300049704 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control | Metagenome | Rhizosphere |
| 100 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 101 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 102 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 103 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 104 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 105 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 106 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 107 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 108 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 109 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 110 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 111 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 112 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
| 113 | 2585428058 | Methylibium sp. CF468 | Isolate | Rhizosphere |
| 114 | 2643221544 | Pelomonas sp. Root1444 | Isolate | Unclassified |
| 115 | 2643221585 | Pelomonas sp. Root662 | Isolate | Unclassified |
| 116 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 117 | 2643221639 | Pelomonas sp. Root1217 | Isolate | Unclassified |
| 118 | 2643221646 | Pelomonas sp. Root1237 | Isolate | Unclassified |
| 119 | 2643221656 | Pelomonas sp. Root405 | Isolate | Unclassified |
| 120 | 2738541337 | Pelomonas sp. BT06 | Isolate | Unclassified |
| 121 | 2857576091 | Pigmentiphaga sp. R-72090 | Isolate | Unclassified |
| 122 | 2919497567 | Shewanella putrefaciens 3469 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.12 |
| Metatranscriptomes | 0.62 |
| Isolates | 6.25 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 24.38 |
| Nodule | 0 |
| Rhizoplane | 5 |
| Rhizosphere | 53.75 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501310_000568 | 3300049130 | Bacteria | 3251 |
| 2 | rootH1_10033458 | 3300003316 | Bacteria | 3495 |
| 3 | rootL2_10018682 | 3300003322 | Bacteria | 2589 |
| 4 | rootL2_10055383 | 3300003322 | Bacteria | 3674 |
| 5 | rootH1_10037255 | 3300003323 | Bacteria | 3609 |
| 6 | rootH1_10141671 | 3300003323 | Bacteria | 1264 |
| 7 | rootH1_10175670 | 3300003323 | Bacteria | 1544 |
| 8 | Ga0055531_10000044 | 3300003794 | Bacteria | 133446 |
| 9 | Ga0065714_10066895 | 3300005288 | Bacteria | 6133 |
| 10 | Ga0070659_100099332 | 3300005366 | Bacteria | 2341 |
| 11 | Ga0068853_100027557 | 3300005539 | Bacteria | 4773 |
| 12 | Ga0068855_100169311 | 3300005563 | Bacteria | 2474 |
| 13 | Ga0068860_100025599 | 3300005843 | Bacteria | 5691 |
| 14 | Ga0075365_10076582 | 3300006038 | Bacteria | 2259 |
| 15 | Ga0075363_100024230 | 3300006048 | Bacteria | 3083 |
| 16 | Ga0075364_10033908 | 3300006051 | Bacteria | 3290 |
| 17 | Ga0075364_10076254 | 3300006051 | Bacteria | 2213 |
| 18 | Ga0075362_10045152 | 3300006177 | Bacteria | 1956 |
| 19 | Ga0075362_10133199 | 3300006177 | Bacteria | 1183 |
| 20 | Ga0075367_10006193 | 3300006178 | Bacteria | 6025 |
| 21 | Ga0075369_10008539 | 3300006186 | Bacteria | 3945 |
| 22 | Ga0075366_10024403 | 3300006195 | Bacteria | 3527 |
| 23 | Ga0075366_10038533 | 3300006195 | Bacteria | 2823 |
| 24 | Ga0075366_10125246 | 3300006195 | Bacteria | 1549 |
| 25 | Ga0075370_10008812 | 3300006353 | Bacteria | 5209 |
| 26 | Ga0075370_10038972 | 3300006353 | Bacteria | 2676 |
| 27 | Ga0075370_10041906 | 3300006353 | Bacteria | 2585 |
| 28 | Ga0105240_10004394 | 3300009093 | Bacteria | 21511 |
| 29 | Ga0105240_10038193 | 3300009093 | Bacteria | 6161 |
| 30 | Ga0105243_10023480 | 3300009148 | Bacteria | 4697 |
| 31 | Ga0105243_10111292 | 3300009148 | Bacteria | 2292 |
| 32 | Ga0105237_10073120 | 3300009545 | Bacteria | 3421 |
| 33 | Ga0105237_10373552 | 3300009545 | Bacteria | 1430 |
| 34 | Ga0105239_10088550 | 3300010375 | Bacteria | 3413 |
| 35 | Ga0157377_10000055 | 3300014745 | Bacteria | 88103 |
| 36 | Ga0213872_10000003 | 3300021361 | Bacteria | 366948 |
| 37 | Ga0213872_10000224 | 3300021361 | Bacteria | 49933 |
| 38 | Ga0213872_10002185 | 3300021361 | Bacteria | 11725 |
| 39 | Ga0213872_10053994 | 3300021361 | Bacteria | 1822 |
| 40 | Ga0209050_1022010 | 3300025298 | Bacteria | 2300 |
| 41 | Ga0209257_1000094 | 3300025304 | Bacteria | 262243 |
| 42 | Ga0209257_1015752 | 3300025304 | Bacteria | 3116 |
| 43 | Ga0207652_10058939 | 3300025921 | Bacteria | 3309 |
| 44 | Ga0207644_10161665 | 3300025931 | Bacteria | 1741 |
| 45 | Ga0207706_10058675 | 3300025933 | Bacteria | 3390 |
| 46 | Ga0207709_10001521 | 3300025935 | Bacteria | 16001 |
| 47 | Ga0207709_10021585 | 3300025935 | Bacteria | 3646 |
| 48 | Ga0207640_10283412 | 3300025981 | Bacteria | 1303 |
| 49 | Ga0207677_10345774 | 3300026023 | Bacteria | 1244 |
| 50 | Ga0207639_10059080 | 3300026041 | Bacteria | 2952 |
| 51 | Ga0207702_10246034 | 3300026078 | Bacteria | 1677 |
| 52 | Ga0207648_10001078 | 3300026089 | Bacteria | 30557 |
| 53 | Ga0207698_10027309 | 3300026142 | Bacteria | 4051 |
| 54 | Ga0207698_10028856 | 3300026142 | Bacteria | 3964 |
| 55 | Ga0209998_10024133 | 3300027717 | Bacteria | 1318 |
| 56 | Ga0307517_10164721 | 3300028786 | Bacteria | 1476 |
| 57 | Ga0307515_10001399 | 3300028794 | Bacteria | 54623 |
| 58 | Ga0307515_10053599 | 3300028794 | Bacteria | 5946 |
| 59 | Ga0307509_10018228 | 3300031507 | Bacteria | 8052 |
| 60 | Ga0307408_100000008 | 3300031548 | Bacteria | 456355 |
| 61 | Ga0307508_10000056 | 3300031616 | Bacteria | 126640 |
| 62 | Ga0307514_10028876 | 3300031649 | Bacteria | 4469 |
| 63 | Ga0307516_10003899 | 3300031730 | Bacteria | 18830 |
| 64 | Ga0307412_10328994 | 3300031911 | Bacteria | 1219 |
| 65 | Ga0307416_100098612 | 3300032002 | Bacteria | 2535 |
| 66 | Ga0307414_10009180 | 3300032004 | Bacteria | 5666 |
| 67 | Ga0307411_10000071 | 3300032005 | Bacteria | 30969 |
| 68 | Ga0307507_10039432 | 3300033179 | Bacteria | 4767 |
| 69 | Ga0373939_0000161 | 3300035114 | Bacteria | 18644 |
| 70 | Ga0373954_0000363 | 3300035118 | Bacteria | 16706 |
| 71 | Ga0373960_0003007 | 3300035121 | Bacteria | 3811 |
| 72 | Ga0373931_0002468 | 3300035691 | Bacteria | 8197 |
| 73 | Ga0373925_0001241 | 3300037068 | Bacteria | 22498 |
| 74 | Ga0395900_0072093 | 3300037418 | Bacteria | 3551 |
| 75 | Ga0395905_0000869 | 3300037471 | Bacteria | 39396 |
| 76 | Ga0395905_0006252 | 3300037471 | Bacteria | 12024 |
| 77 | Ga0395905_0007086 | 3300037471 | Bacteria | 11207 |
| 78 | Ga0395905_0033594 | 3300037471 | Bacteria | 4817 |
| 79 | Ga0395905_0106654 | 3300037471 | Bacteria | 2630 |
| 80 | Ga0400488_35537 | 3300038741 | Bacteria | 2538 |
| 81 | Ga0400487_43976 | 3300039110 | Bacteria | 1712 |
| 82 | Ga0400487_55494 | 3300039110 | Bacteria | 3133 |
| 83 | Ga0436361_0105555 | 3300039447 | Bacteria | 33420 |
| 84 | Ga0436361_0538646 | 3300039447 | Bacteria | 8392 |
| 85 | Ga0436361_0609661 | 3300039447 | Bacteria | 30960 |
| 86 | Ga0436361_0825882 | 3300039447 | Bacteria | 26826 |
| 87 | Ga0451807_2510488 | 3300041486 | Bacteria | 1446 |
| 88 | Ga0450911_000672 | 3300042115 | Bacteria | 10230 |
| 89 | Ga0450917_000389 | 3300042120 | Bacteria | 3303 |
| 90 | Ga0450888_001145 | 3300042126 | Bacteria | 2530 |
| 91 | Ga0450891_000119 | 3300042129 | Bacteria | 7048 |
| 92 | Ga0450892_001872 | 3300042130 | Bacteria | 1896 |
| 93 | Ga0451577_0036265 | 3300042876 | Bacteria | 4439 |
| 94 | Ga0466972_0011626 | 3300044658 | Bacteria | 4420 |
| 95 | Ga0466965_0030212 | 3300044683 | Bacteria | 2639 |
| 96 | Ga0466966_0129889 | 3300044684 | Bacteria | 1543 |
| 97 | Ga0466961_0012735 | 3300044693 | Bacteria | 5385 |
| 98 | Ga0453684_0008711 | 3300044712 | Bacteria | 18036 |
| 99 | Ga0453684_0135574 | 3300044712 | Bacteria | 2948 |
| 100 | Ga0466971_0065423 | 3300044719 | Bacteria | 1646 |
| 101 | Ga0451576_0224561 | 3300045051 | Bacteria | 1961 |
| 102 | Ga0495590_0003625 | 3300046457 | Bacteria | 6290 |
| 103 | Ga0495650_0012878 | 3300046471 | Bacteria | 4466 |
| 104 | Ga0495583_0074431 | 3300046506 | Bacteria | 1487 |
| 105 | Ga0495610_0011104 | 3300046512 | Bacteria | 5531 |
| 106 | Ga0495632_0015144 | 3300046519 | Bacteria | 4335 |
| 107 | Ga0495643_0006049 | 3300046522 | Bacteria | 8065 |
| 108 | Ga0495621_0010804 | 3300046539 | Bacteria | 2806 |
| 109 | Ga0495597_0025251 | 3300046542 | Bacteria | 2736 |
| 110 | Ga0495625_0060381 | 3300046660 | Bacteria | 2686 |
| 111 | Ga0495646_0141900 | 3300046680 | Bacteria | 1342 |
| 112 | Ga0495649_0016547 | 3300046694 | Bacteria | 4178 |
| 113 | Ga0495660_0030553 | 3300046810 | Bacteria | 3034 |
| 114 | Ga0495687_000606 | 3300047443 | Bacteria | 41890 |
| 115 | Ga0495687_004532 | 3300047443 | Bacteria | 9329 |
| 116 | Ga0495686_0070652 | 3300047472 | Bacteria | 2151 |
| 117 | Ga0495626_0029983 | 3300048091 | Bacteria | 2626 |
| 118 | Ga0496101_0078685 | 3300048904 | Bacteria | 2433 |
| 119 | Ga0496102_0159359 | 3300048905 | Bacteria | 2122 |
| 120 | Ga0496105_0053221 | 3300048908 | Bacteria | 3343 |
| 121 | Ga0496106_0053594 | 3300048909 | Bacteria | 3047 |
| 122 | Ga0496108_0185258 | 3300048911 | Bacteria | 1803 |
| 123 | Ga0496110_0075897 | 3300048913 | Bacteria | 2987 |
| 124 | Ga0496111_0046646 | 3300048914 | Bacteria | 3120 |
| 125 | Ga0496124_0158406 | 3300048927 | Bacteria | 1768 |
| 126 | Ga0501198_000032 | 3300049649 | Bacteria | 56732 |
| 127 | Ga0501222_000021 | 3300049662 | Bacteria | 67031 |
| 128 | Ga0501221_016913 | 3300049704 | Bacteria | 1386 |
| 129 | Ga0501241_003830 | 3300049758 | Bacteria | 2836 |
| 130 | nmdc:mga03683_12215_c1 | 3300050489 | Bacteria | 3132 |
| 131 | nmdc:mga03n38_152831_c1 | 3300050490 | Bacteria | 1163 |
| 132 | nmdc:mga00v17_280831_c1 | 3300050491 | Bacteria | 1081 |
| 133 | nmdc:mga00v17_93671_c1 | 3300050491 | Bacteria | 1889 |
| 134 | nmdc:mga0k408_10510_c1 | 3300050493 | Bacteria | 5007 |
| 135 | nmdc:mga0k408_11349_c1 | 3300050493 | Bacteria | 4850 |
| 136 | nmdc:mga0k408_128186_c1 | 3300050493 | Bacteria | 1505 |
| 137 | nmdc:mga0k408_35755_c1 | 3300050493 | Bacteria | 2849 |
| 138 | nmdc:mga0k408_45327_c2 | 3300050493 | Bacteria | 1930 |
| 139 | nmdc:mga0k408_4761_c1 | 3300050493 | Bacteria | 7192 |
| 140 | nmdc:mga04h51_19517_c1 | 3300050495 | Bacteria | 2012 |
| 141 | nmdc:mga07m45_2023_c1 | 3300050496 | Bacteria | 9408 |
| 142 | nmdc:mga07m45_3926_c1 | 3300050496 | Bacteria | 7229 |
| 143 | nmdc:mga07m45_44578_c1 | 3300050496 | Bacteria | 2490 |
| 144 | nmdc:mga07m45_5632_c1 | 3300050496 | Bacteria | 6257 |
| 145 | Ga0500658_0005783 | 3300053134 | Bacteria | 4609 |
| 146 | Ga0500564_108658 | 3300053138 | Bacteria | 1219 |
| 147 | Ga0500568_0013766 | 3300053139 | Bacteria | 3676 |
| 148 | Ga0500619_000673 | 3300053154 | Bacteria | 5813 |
| 149 | Ga0500622_0003766 | 3300053156 | Bacteria | 9904 |
| 150 | Ga0500587_001644 | 3300053739 | Bacteria | 3176 |
| 151 | 2587736125 | 2585428058 | Bacteria | 6853932 |
| 152 | 2643742619 | 2643221544 | Bacteria | 5886209 |
| 153 | 2643936148 | 2643221585 | Bacteria | 5812563 |
| 154 | 2644070796 | 2643221611 | Bacteria | 6820941 |
| 155 | 2644217767 | 2643221639 | Bacteria | 6649903 |
| 156 | 2644258493 | 2643221646 | Bacteria | 6433402 |
| 157 | 2644316793 | 2643221656 | Bacteria | 5809961 |
| 158 | 2739056828 | 2738541337 | Bacteria | 6183410 |
| 159 | 2857579614 | 2857576091 | Bacteria | 5465855 |
| 160 | 2919498403 | 2919497567 | Bacteria | 4408621 |
| 161 | Ga0501310_000568 | |||
| 162 | rootH1_10033458 | |||
| 163 | rootL2_10018682 | |||
| 164 | rootL2_10055383 | |||
| 165 | rootH1_10037255 | |||
| 166 | rootH1_10141671 | |||
| 167 | rootH1_10175670 | |||
| 168 | Ga0055531_10000044 | |||
| 169 | Ga0065714_10066895 | |||
| 170 | Ga0070659_100099332 | |||
| 171 | Ga0068853_100027557 | |||
| 172 | Ga0068855_100169311 | |||
| 173 | Ga0068860_100025599 | |||
| 174 | Ga0075365_10076582 | |||
| 175 | Ga0075363_100024230 | |||
| 176 | Ga0075364_10033908 | |||
| 177 | Ga0075364_10076254 | |||
| 178 | Ga0075362_10045152 | |||
| 179 | Ga0075362_10133199 | |||
| 180 | Ga0075367_10006193 | |||
| 181 | Ga0075369_10008539 | |||
| 182 | Ga0075366_10024403 | |||
| 183 | Ga0075366_10038533 | |||
| 184 | Ga0075366_10125246 | |||
| 185 | Ga0075370_10008812 | |||
| 186 | Ga0075370_10038972 | |||
| 187 | Ga0075370_10041906 | |||
| 188 | Ga0105240_10004394 | |||
| 189 | Ga0105240_10038193 | |||
| 190 | Ga0105243_10023480 | |||
| 191 | Ga0105243_10111292 | |||
| 192 | Ga0105237_10073120 | |||
| 193 | Ga0105237_10373552 | |||
| 194 | Ga0105239_10088550 | |||
| 195 | Ga0157377_10000055 | |||
| 196 | Ga0213872_10000003 | |||
| 197 | Ga0213872_10000224 | |||
| 198 | Ga0213872_10002185 | |||
| 199 | Ga0213872_10053994 | |||
| 200 | Ga0209050_1022010 | |||
| 201 | Ga0209257_1000094 | |||
| 202 | Ga0209257_1015752 | |||
| 203 | Ga0207652_10058939 | |||
| 204 | Ga0207644_10161665 | |||
| 205 | Ga0207706_10058675 | |||
| 206 | Ga0207709_10001521 | |||
| 207 | Ga0207709_10021585 | |||
| 208 | Ga0207640_10283412 | |||
| 209 | Ga0207677_10345774 | |||
| 210 | Ga0207639_10059080 | |||
| 211 | Ga0207702_10246034 | |||
| 212 | Ga0207648_10001078 | |||
| 213 | Ga0207698_10027309 | |||
| 214 | Ga0207698_10028856 | |||
| 215 | Ga0209998_10024133 | |||
| 216 | Ga0307517_10164721 | |||
| 217 | Ga0307515_10001399 | |||
| 218 | Ga0307515_10053599 | |||
| 219 | Ga0307509_10018228 | |||
| 220 | Ga0307408_100000008 | |||
| 221 | Ga0307508_10000056 | |||
| 222 | Ga0307514_10028876 | |||
| 223 | Ga0307516_10003899 | |||
| 224 | Ga0307412_10328994 | |||
| 225 | Ga0307416_100098612 | |||
| 226 | Ga0307414_10009180 | |||
| 227 | Ga0307411_10000071 | |||
| 228 | Ga0307507_10039432 | |||
| 229 | Ga0373939_0000161 | |||
| 230 | Ga0373954_0000363 | |||
| 231 | Ga0373960_0003007 | |||
| 232 | Ga0373931_0002468 | |||
| 233 | Ga0373925_0001241 | |||
| 234 | Ga0395900_0072093 | |||
| 235 | Ga0395905_0000869 | |||
| 236 | Ga0395905_0006252 | |||
| 237 | Ga0395905_0007086 | |||
| 238 | Ga0395905_0033594 | |||
| 239 | Ga0395905_0106654 | |||
| 240 | Ga0400488_35537 | |||
| 241 | Ga0400487_43976 | |||
| 242 | Ga0400487_55494 | |||
| 243 | Ga0436361_0105555 | |||
| 244 | Ga0436361_0538646 | |||
| 245 | Ga0436361_0609661 | |||
| 246 | Ga0436361_0825882 | |||
| 247 | Ga0451807_2510488 | |||
| 248 | Ga0450911_000672 | |||
| 249 | Ga0450917_000389 | |||
| 250 | Ga0450888_001145 | |||
| 251 | Ga0450891_000119 | |||
| 252 | Ga0450892_001872 | |||
| 253 | Ga0451577_0036265 | |||
| 254 | Ga0466972_0011626 | |||
| 255 | Ga0466965_0030212 | |||
| 256 | Ga0466966_0129889 | |||
| 257 | Ga0466961_0012735 | |||
| 258 | Ga0453684_0008711 | |||
| 259 | Ga0453684_0135574 | |||
| 260 | Ga0466971_0065423 | |||
| 261 | Ga0451576_0224561 | |||
| 262 | Ga0495590_0003625 | |||
| 263 | Ga0495650_0012878 | |||
| 264 | Ga0495583_0074431 | |||
| 265 | Ga0495610_0011104 | |||
| 266 | Ga0495632_0015144 | |||
| 267 | Ga0495643_0006049 | |||
| 268 | Ga0495621_0010804 | |||
| 269 | Ga0495597_0025251 | |||
| 270 | Ga0495625_0060381 | |||
| 271 | Ga0495646_0141900 | |||
| 272 | Ga0495649_0016547 | |||
| 273 | Ga0495660_0030553 | |||
| 274 | Ga0495687_000606 | |||
| 275 | Ga0495687_004532 | |||
| 276 | Ga0495686_0070652 | |||
| 277 | Ga0495626_0029983 | |||
| 278 | Ga0496101_0078685 | |||
| 279 | Ga0496102_0159359 | |||
| 280 | Ga0496105_0053221 | |||
| 281 | Ga0496106_0053594 | |||
| 282 | Ga0496108_0185258 | |||
| 283 | Ga0496110_0075897 | |||
| 284 | Ga0496111_0046646 | |||
| 285 | Ga0496124_0158406 | |||
| 286 | Ga0501198_000032 | |||
| 287 | Ga0501222_000021 | |||
| 288 | Ga0501221_016913 | |||
| 289 | Ga0501241_003830 | |||
| 290 | nmdc:mga03683_12215_c1 | |||
| 291 | nmdc:mga03n38_152831_c1 | |||
| 292 | nmdc:mga00v17_280831_c1 | |||
| 293 | nmdc:mga00v17_93671_c1 | |||
| 294 | nmdc:mga0k408_10510_c1 | |||
| 295 | nmdc:mga0k408_11349_c1 | |||
| 296 | nmdc:mga0k408_128186_c1 | |||
| 297 | nmdc:mga0k408_35755_c1 | |||
| 298 | nmdc:mga0k408_45327_c2 | |||
| 299 | nmdc:mga0k408_4761_c1 | |||
| 300 | nmdc:mga04h51_19517_c1 | |||
| 301 | nmdc:mga07m45_2023_c1 | |||
| 302 | nmdc:mga07m45_3926_c1 | |||
| 303 | nmdc:mga07m45_44578_c1 | |||
| 304 | nmdc:mga07m45_5632_c1 | |||
| 305 | Ga0500658_0005783 | |||
| 306 | Ga0500564_108658 | |||
| 307 | Ga0500568_0013766 | |||
| 308 | Ga0500619_000673 | |||
| 309 | Ga0500622_0003766 | |||
| 310 | Ga0500587_001644 | |||
| 311 | 2587736125 | |||
| 312 | 2643742619 | |||
| 313 | 2643936148 | |||
| 314 | 2644070796 | |||
| 315 | 2644217767 | |||
| 316 | 2644258493 | |||
| 317 | 2644316793 | |||
| 318 | 2739056828 | |||
| 319 | 2857579614 | |||
| 320 | 2919498403 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4kla-assembly1.cif.gz_B | e343d variant of human ferrochelatase | 0.8958 | 16 | 338 |
| 4kmm-assembly1.cif.gz_B | m76h variant of human ferrochelatase | 0.8956 | 16 | 338 |
| 2po7-assembly1.cif.gz_B | crystal structure of human ferrochelatase mutant with his 341 replaced by cys | 0.8825 | 17 | 338 |
| 3hcn-assembly1.cif.gz_B | hg and protoporphyrin bound human ferrochelatase | 0.8718 | 16 | 338 |
| 7ct7-assembly1.cif.gz_B | fech - inhibitor complex 2 | 0.8715 | 16 | 338 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P23871_188_298_3.40.50.1400 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9895 | 202 | 311 | 3.40.50.1400 |
| af_P23871_188_298_3.40.50.1400 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9719 | 202 | 311 | 3.40.50.1400 |
| af_Q8ID58_27_285_3.40.50.1400 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9688 | 20 | 271 | 3.40.50.1400 |
| af_P23871_6_250_3.40.605.10 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 | 0.9571 | 20 | 262 | 3.40.605.10 |
| af_P23871_6_250_3.40.605.10 | Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 | 0.9456 | 20 | 262 | 3.40.605.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6P2EL70-F1-model_v4 | Ferrochelatase (EC 4.98.1.1) (Heme synthase) (Protoheme ferro-lyase) | 0.9935 | 22 | 340 |
GO:0004325
GO:0005737 GO:0006783 GO:0046872 |
| AF-A0A523K981-F1-model_v4 | Ferrochelatase (EC 4.98.1.1) (Heme synthase) (Protoheme ferro-lyase) | 0.9884 | 19 | 332 |
GO:0004325
GO:0005737 GO:0006783 GO:0046872 |
| AF-Q2SP77-F1-model_v4 | Ferrochelatase (EC 4.98.1.1) (Heme synthase) (Protoheme ferro-lyase) | 0.9877 | 22 | 337 |
GO:0004325
GO:0005737 GO:0006783 GO:0046872 |
| AF-A0A660MMC7-F1-model_v4 | Ferrochelatase (EC 4.98.1.1) | 0.9877 | 169 | 336 |
GO:0004325
GO:0005737 GO:0006783 |
| AF-A0A235CA94-F1-model_v4 | Ferrochelatase (EC 4.98.1.1) (Heme synthase) (Protoheme ferro-lyase) | 0.9873 | 18 | 333 |
GO:0004325
GO:0005737 GO:0006783 GO:0046872 |