F232737

General Info

Members Datasets Scaffolds Average Seq Length
159 99 318 253

Family's Representative Sequence

Representative Sequence 3300041486|Ga0451807_1742637|Ga0451807_1742637_34_915
Length 293
Sequence MSDMSISPAVTKKAVIHRMVMPNHTCPYGLKAMHLLKRAGYEVEDHHLTTRGETDAFKAEHNVATTPQIFIGGKRVGGHDDLRRFLGKRVVDPKATSYRPVVALFSMTALMALAAGYAVTGGLFTRLAAEWFIGFSMVVLALLKLQNIDSFATMFLNYDLLAKRWVPYSYIYPFAEGLAGVLMVAGALTWLSAPIALLIGTIGAVSVFKAVYIERRELKCACVGGSSNVPLGFISLTENLMMIAMAFWMTLTALGLTTGENHAMTQPTHAVEASSPAGERSRSAAFTEGRIMR

Samples

Sample ID Description Type Environment
1 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
88 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
89 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
90 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
91 2643221568 Rhizobium sp. Root564 Isolate Unclassified
92 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
93 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
94 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
95 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
96 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
97 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
98 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere
99 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.71
Metatranscriptomes 0
Isolates 6.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.4
Nodule 0.63
Rhizoplane 0.63
Rhizosphere 89.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451807_1742637 3300041486 Bacteria 1665
2 rootH1_10091275 3300003323 Bacteria 1615
3 Ga0055540_1006035 3300003792 Bacteria 4906
4 Ga0070658_10183132 3300005327 Bacteria 1763
5 Ga0070658_10446946 3300005327 Bacteria 1113
6 Ga0070658_10575155 3300005327 Bacteria 976
7 Ga0070658_10632221 3300005327 Bacteria 928
8 Ga0070683_100142936 3300005329 Bacteria 2267
9 Ga0070683_100374733 3300005329 Bacteria 1356
10 Ga0070680_100007024 3300005336 Bacteria 8581
11 Ga0070680_100130810 3300005336 Bacteria 2100
12 Ga0070660_100003775 3300005339 Bacteria 10470
13 Ga0070660_100074910 3300005339 Bacteria 2649
14 Ga0070691_10066214 3300005341 Bacteria 1746
15 Ga0070661_100019511 3300005344 Bacteria 4832
16 Ga0070661_100108803 3300005344 Bacteria 2068
17 Ga0070661_100196740 3300005344 Bacteria 1539
18 Ga0070659_100023484 3300005366 Bacteria 4719
19 Ga0070659_100024311 3300005366 Bacteria 4643
20 Ga0070659_100071410 3300005366 Bacteria 2760
21 Ga0070663_100609209 3300005455 Bacteria 919
22 Ga0070662_100002114 3300005457 Bacteria 12181
23 Ga0070681_10183497 3300005458 Bacteria 2014
24 Ga0070681_10185357 3300005458 Bacteria 2002
25 Ga0070679_100095397 3300005530 Bacteria 2962
26 Ga0068853_100091900 3300005539 Bacteria 2669
27 Ga0068855_100001243 3300005563 Bacteria 31626
28 Ga0068855_100010764 3300005563 Bacteria 11042
29 Ga0070664_100026023 3300005564 Bacteria 4851
30 Ga0068854_100000412 3300005578 Bacteria 26854
31 Ga0068856_100101314 3300005614 Bacteria 2873
32 Ga0068856_100159759 3300005614 Bacteria 2264
33 Ga0068856_100623190 3300005614 Bacteria 1100
34 Ga0068852_100110381 3300005616 Bacteria 2499
35 Ga0075366_10062456 3300006195 Bacteria 2214
36 Ga0097621_100256412 3300006237 Bacteria 1533
37 Ga0105240_10006952 3300009093 Bacteria 16527
38 Ga0105239_10179980 3300010375 Bacteria 2365
39 Ga0105239_10241396 3300010375 Bacteria 2028
40 Ga0157371_10008793 3300013102 Bacteria 8003
41 Ga0157371_10008956 3300013102 Bacteria 7917
42 Ga0157371_10132493 3300013102 Bacteria 1774
43 Ga0157370_10028368 3300013104 Bacteria 5506
44 Ga0157370_10090331 3300013104 Bacteria 2876
45 Ga0157370_10215057 3300013104 Bacteria 1781
46 Ga0157370_10241834 3300013104 Bacteria 1670
47 Ga0157369_10000239 3300013105 Bacteria 76144
48 Ga0157369_10005301 3300013105 Bacteria 15025
49 Ga0157369_10008663 3300013105 Bacteria 11664
50 Ga0157372_10001391 3300013307 Bacteria 26086
51 Ga0209676_1009412 3300025292 Bacteria 4218
52 Ga0209050_1032466 3300025298 Bacteria 1605
53 Ga0209051_1003337 3300025303 Bacteria 10597
54 Ga0209257_1004567 3300025304 Bacteria 10597
55 Ga0207647_10009666 3300025904 Bacteria 6845
56 Ga0207647_10069223 3300025904 Bacteria 2134
57 Ga0207647_10113078 3300025904 Bacteria 1604
58 Ga0207647_10173228 3300025904 Bacteria 1256
59 Ga0207705_10000091 3300025909 Bacteria 110768
60 Ga0207705_10035728 3300025909 Bacteria 3555
61 Ga0207705_10046251 3300025909 Bacteria 3127
62 Ga0207705_10105767 3300025909 Bacteria 2075
63 Ga0207707_10015231 3300025912 Bacteria 6695
64 Ga0207695_10008171 3300025913 Bacteria 13149
65 Ga0207660_10137183 3300025917 Bacteria 1867
66 Ga0207660_10220407 3300025917 Bacteria 1489
67 Ga0207657_10000289 3300025919 Bacteria 53536
68 Ga0207657_10001122 3300025919 Bacteria 28419
69 Ga0207657_10017498 3300025919 Bacteria 6868
70 Ga0207657_10165616 3300025919 Bacteria 1793
71 Ga0207649_10008582 3300025920 Bacteria 5576
72 Ga0207649_10076434 3300025920 Bacteria 2155
73 Ga0207649_10320967 3300025920 Bacteria 1138
74 Ga0207652_10057619 3300025921 Bacteria 3346
75 Ga0207652_10517758 3300025921 Bacteria 1073
76 Ga0207690_10009615 3300025932 Bacteria 5739
77 Ga0207690_10034072 3300025932 Bacteria 3279
78 Ga0207706_10001928 3300025933 Bacteria 20368
79 Ga0207706_10029702 3300025933 Bacteria 4879
80 Ga0207661_10123745 3300025944 Bacteria 2206
81 Ga0207679_10060793 3300025945 Bacteria 2809
82 Ga0207679_10110809 3300025945 Bacteria 2166
83 Ga0207667_10004101 3300025949 Bacteria 17906
84 Ga0207640_10000489 3300025981 Bacteria 24106
85 Ga0207639_10796719 3300026041 Bacteria 880
86 Ga0207678_10014120 3300026067 Bacteria 7024
87 Ga0207674_10536870 3300026116 Bacteria 1130
88 Ga0207698_10072286 3300026142 Bacteria 2741
89 Ga0209974_10018503 3300027876 Bacteria 2312
90 Ga0307405_10388466 3300031731 Bacteria 1089
91 Ga0307413_10075841 3300031824 Bacteria 2135
92 Ga0307410_10494106 3300031852 Bacteria 1006
93 Ga0307407_10147732 3300031903 Bacteria 1524
94 Ga0307412_10163748 3300031911 Bacteria 1656
95 Ga0307412_10205376 3300031911 Bacteria 1499
96 Ga0307409_100230531 3300031995 Bacteria 1678
97 Ga0307409_100357097 3300031995 Bacteria 1381
98 Ga0307416_100333216 3300032002 Bacteria 1526
99 Ga0307414_10026498 3300032004 Bacteria 3731
100 Ga0307414_10030232 3300032004 Bacteria 3536
101 Ga0307414_10068147 3300032004 Bacteria 2552
102 Ga0307414_10143518 3300032004 Bacteria 1873
103 Ga0307414_10268462 3300032004 Bacteria 1427
104 Ga0307414_10371783 3300032004 Bacteria 1233
105 Ga0307414_10533754 3300032004 Bacteria 1043
106 Ga0307411_10022487 3300032005 Bacteria 3713
107 Ga0307411_10124723 3300032005 Bacteria 1870
108 Ga0307415_100003694 3300032126 Bacteria 7833
109 Ga0307415_100457648 3300032126 Bacteria 1105
110 Ga0395899_0033349 3300037312 Bacteria 3866
111 Ga0395900_0073844 3300037418 Bacteria 3507
112 Ga0395900_0140158 3300037418 Bacteria 2476
113 Ga0395898_0014896 3300037466 Bacteria 7982
114 Ga0395898_0818990 3300037466 Bacteria 871
115 Ga0395905_0058525 3300037471 Bacteria 3603
116 Ga0395905_0115100 3300037471 Bacteria 2527
117 Ga0395905_0394942 3300037471 Bacteria 1277
118 Ga0395901_0110689 3300038443 Bacteria 2883
119 Ga0395901_0192746 3300038443 Bacteria 2137
120 Ga0395901_0393948 3300038443 Bacteria 1423
121 Ga0451841_0802958 3300041498 Bacteria 1591
122 Ga0466961_0378772 3300044693 Bacteria 859
123 Ga0466963_0001964 3300044694 Bacteria 11290
124 Ga0466971_0054887 3300044719 Bacteria 1795
125 Ga0466968_0004474 3300044735 Bacteria 5226
126 Ga0466968_0043333 3300044735 Bacteria 1905
127 Ga0466970_0060447 3300044765 Bacteria 2029
128 Ga0466957_0000183 3300044842 Bacteria 28401
129 Ga0466957_0076794 3300044842 Bacteria 2074
130 Ga0466958_0001029 3300045836 Bacteria 12729
131 Ga0466958_0079968 3300045836 Bacteria 2010
132 Ga0466958_0354659 3300045836 Bacteria 944
133 Ga0466967_0037513 3300045976 Bacteria 4148
134 Ga0495686_0001271 3300047472 Bacteria 28583
135 Ga0501031_0480148 3300049568 Bacteria 802
136 Ga0501032_0243781 3300049569 Bacteria 1167
137 Ga0501033_0029611 3300049570 Bacteria 4114
138 Ga0501034_0057489 3300049571 Bacteria 3911
139 Ga0501034_0654034 3300049571 Bacteria 952
140 Ga0501038_0026700 3300049574 Bacteria 5141
141 Ga0501043_0023692 3300049579 Bacteria 4814
142 Ga0501043_0448820 3300049579 Bacteria 969
143 Ga0501047_0290995 3300049581 Bacteria 1477
144 Ga0501070_0158619 3300049586 Bacteria 1865
145 Ga0501249_000493 3300049679 Bacteria 9735
146 Ga0501035_0248697 3300049822 Bacteria 1510
147 Ga0501204_001523 3300049850 Bacteria 2275
148 Ga0500643_003680 3300053087 Bacteria 7232
149 Ga0466962_0032962 3300061719 Bacteria 2478
150 2513883596 2513237140 Bacteria 7076289
151 2643858317 2643221568 Bacteria 5187270
152 2834578356 2834578030 Bacteria 3530182
153 2861696877 2861691609 Bacteria 5628931
154 2895883107 2895880812 Bacteria 11255272
155 2928969814 2928968154 Bacteria 4633371
156 2946791538 2946787523 Bacteria 4366789
157 2996340599 2996336353 Bacteria 5511628
158 8056875925 8056875544 Bacteria 4355797
159 8057102875 8057101203 Bacteria 5034064
160 Ga0451807_1742637
161 rootH1_10091275
162 Ga0055540_1006035
163 Ga0070658_10183132
164 Ga0070658_10446946
165 Ga0070658_10575155
166 Ga0070658_10632221
167 Ga0070683_100142936
168 Ga0070683_100374733
169 Ga0070680_100007024
170 Ga0070680_100130810
171 Ga0070660_100003775
172 Ga0070660_100074910
173 Ga0070691_10066214
174 Ga0070661_100019511
175 Ga0070661_100108803
176 Ga0070661_100196740
177 Ga0070659_100023484
178 Ga0070659_100024311
179 Ga0070659_100071410
180 Ga0070663_100609209
181 Ga0070662_100002114
182 Ga0070681_10183497
183 Ga0070681_10185357
184 Ga0070679_100095397
185 Ga0068853_100091900
186 Ga0068855_100001243
187 Ga0068855_100010764
188 Ga0070664_100026023
189 Ga0068854_100000412
190 Ga0068856_100101314
191 Ga0068856_100159759
192 Ga0068856_100623190
193 Ga0068852_100110381
194 Ga0075366_10062456
195 Ga0097621_100256412
196 Ga0105240_10006952
197 Ga0105239_10179980
198 Ga0105239_10241396
199 Ga0157371_10008793
200 Ga0157371_10008956
201 Ga0157371_10132493
202 Ga0157370_10028368
203 Ga0157370_10090331
204 Ga0157370_10215057
205 Ga0157370_10241834
206 Ga0157369_10000239
207 Ga0157369_10005301
208 Ga0157369_10008663
209 Ga0157372_10001391
210 Ga0209676_1009412
211 Ga0209050_1032466
212 Ga0209051_1003337
213 Ga0209257_1004567
214 Ga0207647_10009666
215 Ga0207647_10069223
216 Ga0207647_10113078
217 Ga0207647_10173228
218 Ga0207705_10000091
219 Ga0207705_10035728
220 Ga0207705_10046251
221 Ga0207705_10105767
222 Ga0207707_10015231
223 Ga0207695_10008171
224 Ga0207660_10137183
225 Ga0207660_10220407
226 Ga0207657_10000289
227 Ga0207657_10001122
228 Ga0207657_10017498
229 Ga0207657_10165616
230 Ga0207649_10008582
231 Ga0207649_10076434
232 Ga0207649_10320967
233 Ga0207652_10057619
234 Ga0207652_10517758
235 Ga0207690_10009615
236 Ga0207690_10034072
237 Ga0207706_10001928
238 Ga0207706_10029702
239 Ga0207661_10123745
240 Ga0207679_10060793
241 Ga0207679_10110809
242 Ga0207667_10004101
243 Ga0207640_10000489
244 Ga0207639_10796719
245 Ga0207678_10014120
246 Ga0207674_10536870
247 Ga0207698_10072286
248 Ga0209974_10018503
249 Ga0307405_10388466
250 Ga0307413_10075841
251 Ga0307410_10494106
252 Ga0307407_10147732
253 Ga0307412_10163748
254 Ga0307412_10205376
255 Ga0307409_100230531
256 Ga0307409_100357097
257 Ga0307416_100333216
258 Ga0307414_10026498
259 Ga0307414_10030232
260 Ga0307414_10068147
261 Ga0307414_10143518
262 Ga0307414_10268462
263 Ga0307414_10371783
264 Ga0307414_10533754
265 Ga0307411_10022487
266 Ga0307411_10124723
267 Ga0307415_100003694
268 Ga0307415_100457648
269 Ga0395899_0033349
270 Ga0395900_0073844
271 Ga0395900_0140158
272 Ga0395898_0014896
273 Ga0395898_0818990
274 Ga0395905_0058525
275 Ga0395905_0115100
276 Ga0395905_0394942
277 Ga0395901_0110689
278 Ga0395901_0192746
279 Ga0395901_0393948
280 Ga0451841_0802958
281 Ga0466961_0378772
282 Ga0466963_0001964
283 Ga0466971_0054887
284 Ga0466968_0004474
285 Ga0466968_0043333
286 Ga0466970_0060447
287 Ga0466957_0000183
288 Ga0466957_0076794
289 Ga0466958_0001029
290 Ga0466958_0079968
291 Ga0466958_0354659
292 Ga0466967_0037513
293 Ga0495686_0001271
294 Ga0501031_0480148
295 Ga0501032_0243781
296 Ga0501033_0029611
297 Ga0501034_0057489
298 Ga0501034_0654034
299 Ga0501038_0026700
300 Ga0501043_0023692
301 Ga0501043_0448820
302 Ga0501047_0290995
303 Ga0501070_0158619
304 Ga0501249_000493
305 Ga0501035_0248697
306 Ga0501204_001523
307 Ga0500643_003680
308 Ga0466962_0032962
309 2513883596
310 2643858317
311 2834578356
312 2861696877
313 2895883107
314 2928969814
315 2946791538
316 2996340599
317 8056875925
318 8057102875

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00462

Glutaredoxin

Glutaredoxin

10

76

0.9

PF07291

MauE

Methylamine utilisation protein MauE

122

252

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nm3-assembly1.cif.gz_B crystal structure of heamophilus influenza hybrid-prx5 0.8137 5 80
4mja-assembly1.cif.gz_A synechocystis sp. pcc 6803 glutaredoxin a-a75i 0.8103 5 81
4mje-assembly1.cif.gz_A synechocystis sp. pcc 6803 glutaredoxin a-r27l 0.8073 5 81
4mjc-assembly1.cif.gz_A synechocystis sp. pcc 6803 glutaredoxin a - p84r 0.8072 5 81
3msz-assembly1.cif.gz_A crystal structure of glutaredoxin 1 from francisella tularensis complexed with cacodylate 0.7899 6 81
ID Description Score Start End Superfamily
af_Q9FHX0_75_159_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8394 7 81 3.40.30.10
af_Q54EX7_20_123_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.818 8 84 3.40.30.10
af_Q966G8_1_76_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7978 7 81 3.40.30.10
af_Q555C8_40_141_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7757 3 81 3.40.30.10
af_Q9UTI2_1_108_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.7741 8 81 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A359K3C7-F1-model_v4 deleted 0.9973 7 79
AF-A0A7W5MMB5-F1-model_v4 Glutaredoxin 0.9896 4 81
AF-A0A7Y9FLN0-F1-model_v4 Glutaredoxin 0.9843 1 81
AF-A0A7X6BIB8-F1-model_v4 Glutaredoxin 0.9831 6 81
AF-A0A3T1DLX2-F1-model_v4 deleted 0.9821 6 78

Map