F232614

General Info

Members Datasets Scaffolds Average Seq Length
159 120 318 401

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0089301|Ga0316574_0089301_254_1564
Length 436
Sequence MASDPLDVLVVGGGGREHALVRSLATSPRIGRLFCAPGNPGIEDDARTADLGVEDIPALAAFVEQEGIDLTVIGPEAPLVAGLGDRLRGRGFDVFGPGADGARLEGSKAFAKEVMEAARVPTGRAAIFAEHGQALAYLRDRGAPVVVKADGLAAGKGVIVALTLEEAESALAECFVERRFGKAADTVLLEEYLEGEEVSLLSIVSGDQILPLAPAQDYKRALDGDKGANTGGMGSYSPVPAVDEALFAGLVDEVVRPTVAELARRGIDFRGVLYAGLMLTAGGPKVLEFNCRFGDPETQALLPRLESDLLELLCRAARAEELPAEVRWRSGAAVGVVMASRGYPASSSKGDVISGVDEVKAMPAVEVFHAGTGRTVDGRLVTAGGRVLTVTGLGETFAEARTRAYAGVAAIGFEGAQHRSDIALRAEEWEARRGGE

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
28 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
45 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
56 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
57 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
58 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
65 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
71 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
93 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
107 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
115 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
116 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.26
Nodule 0
Rhizoplane 11.95
Rhizosphere 86.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0089301 3300035398 Bacteria 1963
2 Ga0070683_100146648 3300005329 Bacteria 2237
3 Ga0070670_100247671 3300005331 Bacteria 1552
4 Ga0070660_100034293 3300005339 Bacteria 3833
5 Ga0070687_100078738 3300005343 Bacteria 1792
6 Ga0070692_10055415 3300005345 Bacteria 2073
7 Ga0070659_100030412 3300005366 Bacteria 4180
8 Ga0070709_10010436 3300005434 Bacteria 5147
9 Ga0070709_10091100 3300005434 Bacteria 2011
10 Ga0070714_100002803 3300005435 Bacteria 12863
11 Ga0070713_100127835 3300005436 Bacteria 2238
12 Ga0070711_100182690 3300005439 Bacteria 1606
13 Ga0070663_100119766 3300005455 Bacteria 1987
14 Ga0070662_100020458 3300005457 Bacteria 4507
15 Ga0070707_100000570 3300005468 Bacteria 37054
16 Ga0070707_100243570 3300005468 Bacteria 1750
17 Ga0070698_100174119 3300005471 Bacteria 2092
18 Ga0070684_100120006 3300005535 Bacteria 2365
19 Ga0070684_100241694 3300005535 Bacteria 1650
20 Ga0070672_100085745 3300005543 Bacteria 2531
21 Ga0070686_100184052 3300005544 Bacteria 1486
22 Ga0068864_100069156 3300005618 Bacteria 3070
23 Ga0068858_100189267 3300005842 Bacteria 1944
24 Ga0070717_10177737 3300006028 Bacteria 1854
25 Ga0075429_100093493 3300006880 Bacteria 2623
26 Ga0111539_10042269 3300009094 Bacteria 5476
27 Ga0105245_10096686 3300009098 Bacteria 2726
28 Ga0114129_10329429 3300009147 Bacteria 2028
29 Ga0105243_10076488 3300009148 Bacteria 2720
30 Ga0157373_10119122 3300013100 Bacteria 1855
31 Ga0182008_10058528 3300014497 Bacteria 1902
32 Ga0157379_10064712 3300014968 Bacteria 3268
33 Ga0207707_10099554 3300025912 Bacteria 2541
34 Ga0207657_10009662 3300025919 Bacteria 9679
35 Ga0207646_10000371 3300025922 Bacteria 59994
36 Ga0207646_10199394 3300025922 Bacteria 1808
37 Ga0207700_10168429 3300025928 Bacteria 1825
38 Ga0207706_10091949 3300025933 Bacteria 2667
39 Ga0207691_10144748 3300025940 Bacteria 2093
40 Ga0207691_10149854 3300025940 Bacteria 2051
41 Ga0207691_10224893 3300025940 Bacteria 1626
42 Ga0207661_10156670 3300025944 Bacteria 1973
43 Ga0207678_10099379 3300026067 Bacteria 2485
44 Ga0207702_10097832 3300026078 Bacteria 2583
45 Ga0207702_10127744 3300026078 Bacteria 2284
46 Ga0207702_10198926 3300026078 Bacteria 1856
47 Ga0207676_10136391 3300026095 Bacteria 2094
48 Ga0207675_100338066 3300026118 Bacteria 1473
49 Ga0207683_10168025 3300026121 Bacteria 1986
50 Ga0207698_10123324 3300026142 Bacteria 2198
51 Ga0307515_10000297 3300028794 Bacteria 122823
52 Ga0265338_10000351 3300028800 Bacteria 83671
53 Ga0265338_10023514 3300028800 Bacteria 6333
54 Ga0265320_10064966 3300031240 Bacteria 1732
55 Ga0265327_10001068 3300031251 Bacteria 38200
56 Ga0265327_10083289 3300031251 Bacteria 1574
57 Ga0265316_10021957 3300031344 Bacteria 5393
58 Ga0316575_10024177 3300031665 Bacteria 2350
59 Ga0265342_10051594 3300031712 Bacteria 2454
60 Ga0316576_10016075 3300031727 Bacteria 5045
61 Ga0316576_10018723 3300031727 Bacteria 4734
62 Ga0316578_10011173 3300031728 Bacteria 4685
63 Ga0316577_10010514 3300031733 Bacteria 4999
64 Ga0307413_10064470 3300031824 Bacteria 2277
65 Ga0307406_10048938 3300031901 Bacteria 2673
66 Ga0307412_10045807 3300031911 Bacteria 2862
67 Ga0316583_10017966 3300032133 Bacteria 2539
68 Ga0373928_0034500 3300035084 Bacteria 1136
69 Ga0373934_0070188 3300035086 Bacteria 1401
70 Ga0316574_0010340 3300035398 Bacteria 5270
71 Ga0316574_0158940 3300035398 Bacteria 1456
72 Ga0316582_0015178 3300036647 Bacteria 4396
73 Ga0373925_0104203 3300037068 Bacteria 2184
74 Ga0395898_0083940 3300037466 Bacteria 3070
75 Ga0395905_0010908 3300037471 Bacteria 8798
76 Ga0395901_0005842 3300038443 Bacteria 12450
77 Ga0436360_1122129 3300039438 Bacteria 3122
78 Ga0466969_0012708 3300044656 Bacteria 4435
79 Ga0466965_0014884 3300044683 Bacteria 3687
80 Ga0466966_0003177 3300044684 Bacteria 10816
81 Ga0466961_0003290 3300044693 Bacteria 10068
82 Ga0466961_0017788 3300044693 Bacteria 4566
83 Ga0466961_0172466 3300044693 Bacteria 1345
84 Ga0466963_0000048 3300044694 Bacteria 39958
85 Ga0466963_0003820 3300044694 Bacteria 8685
86 Ga0466963_0032351 3300044694 Bacteria 3386
87 Ga0466963_0035612 3300044694 Bacteria 3243
88 Ga0466963_0086938 3300044694 Bacteria 2125
89 Ga0466964_0003327 3300044706 Bacteria 5859
90 Ga0466964_0004441 3300044706 Bacteria 5182
91 Ga0466971_0037463 3300044719 Bacteria 2173
92 Ga0466957_0000628 3300044842 Bacteria 17883
93 Ga0466957_0087281 3300044842 Bacteria 1950
94 Ga0466959_0044011 3300045049 Bacteria 3289
95 Ga0466959_0061112 3300045049 Bacteria 2740
96 Ga0466958_0000428 3300045836 Bacteria 17380
97 Ga0466958_0009426 3300045836 Bacteria 5440
98 Ga0466958_0026498 3300045836 Bacteria 3426
99 Ga0466958_0026916 3300045836 Bacteria 3400
100 Ga0466967_0000041 3300045976 Bacteria 46227
101 Ga0466967_0169616 3300045976 Bacteria 2053
102 Ga0495603_0010550 3300046455 Bacteria 5595
103 Ga0495629_0225726 3300046459 Bacteria 1291
104 Ga0495641_0016557 3300046461 Bacteria 3880
105 Ga0495653_0029234 3300046463 Bacteria 4403
106 Ga0495653_0114305 3300046463 Bacteria 1934
107 Ga0495582_0098762 3300046473 Bacteria 1634
108 Ga0495664_0049683 3300046477 Bacteria 2490
109 Ga0495608_0010267 3300046511 Bacteria 6533
110 Ga0495608_0034392 3300046511 Bacteria 3421
111 Ga0495618_0039439 3300046514 Bacteria 2969
112 Ga0495630_0079852 3300046517 Bacteria 2467
113 Ga0495644_0029169 3300046523 Bacteria 2085
114 Ga0495640_0020484 3300046533 Bacteria 4867
115 Ga0495667_0069171 3300046559 Bacteria 2304
116 Ga0495634_0059990 3300046642 Bacteria 2532
117 Ga0495635_0142908 3300046663 Bacteria 1629
118 Ga0495657_0060441 3300046675 Bacteria 2510
119 Ga0495647_0009818 3300046681 Bacteria 3250
120 Ga0495658_0038214 3300046683 Bacteria 2658
121 Ga0495669_0009823 3300046684 Bacteria 4043
122 Ga0495613_0003879 3300046689 Bacteria 11189
123 Ga0495671_0089398 3300046692 Bacteria 1508
124 Ga0495674_0000780 3300047319 Bacteria 30304
125 Ga0495674_0036942 3300047319 Bacteria 4391
126 Ga0495684_0007372 3300047471 Bacteria 8527
127 Ga0496102_0063714 3300048905 Bacteria 3376
128 Ga0496102_0130833 3300048905 Bacteria 2349
129 Ga0496104_0003708 3300048907 Bacteria 13186
130 Ga0496108_0001538 3300048911 Bacteria 18255
131 Ga0496108_0028035 3300048911 Bacteria 4658
132 Ga0496108_0151317 3300048911 Bacteria 2002
133 Ga0496109_0001854 3300048912 Bacteria 17506
134 Ga0496109_0276502 3300048912 Bacteria 1582
135 Ga0496110_0000112 3300048913 Bacteria 44496
136 Ga0496111_0000091 3300048914 Bacteria 38326
137 Ga0496112_0010054 3300048915 Bacteria 8566
138 Ga0496112_0112041 3300048915 Bacteria 2698
139 Ga0496112_0133422 3300048915 Bacteria 2454
140 Ga0496113_0002639 3300048916 Bacteria 10500
141 Ga0496114_0053043 3300048917 Bacteria 3380
142 Ga0496114_0107113 3300048917 Bacteria 2392
143 Ga0496114_0109554 3300048917 Bacteria 2365
144 Ga0496115_0038944 3300048918 Bacteria 3775
145 Ga0496115_0242719 3300048918 Bacteria 1485
146 Ga0501068_0004894 3300049584 Bacteria 7295
147 Ga0501069_0123567 3300049585 Bacteria 1479
148 Ga0501075_0071370 3300049591 Bacteria 2625
149 Ga0501080_0192924 3300049742 Bacteria 1872
150 nmdc:mga09592_48579_c1 3300050508 Bacteria 3577
151 nmdc:mga0n895_150627_c1 3300050512 Bacteria 2356
152 Ga0495601_0038705 3300053077 Bacteria 2982
153 Ga0495619_0034263 3300053085 Bacteria 3300
154 Ga0500556_0001181 3300053104 Bacteria 12427
155 Ga0500616_0008665 3300053153 Bacteria 6285
156 Ga0501082_0136016 3300060353 Bacteria 2132
157 Ga0466962_0011791 3300061719 Bacteria 4209
158 Ga0466962_0060980 3300061719 Bacteria 1800
159 Ga0530510_0021143 3300061734 Bacteria 4629
160 Ga0316574_0089301
161 Ga0070683_100146648
162 Ga0070670_100247671
163 Ga0070660_100034293
164 Ga0070687_100078738
165 Ga0070692_10055415
166 Ga0070659_100030412
167 Ga0070709_10010436
168 Ga0070709_10091100
169 Ga0070714_100002803
170 Ga0070713_100127835
171 Ga0070711_100182690
172 Ga0070663_100119766
173 Ga0070662_100020458
174 Ga0070707_100000570
175 Ga0070707_100243570
176 Ga0070698_100174119
177 Ga0070684_100120006
178 Ga0070684_100241694
179 Ga0070672_100085745
180 Ga0070686_100184052
181 Ga0068864_100069156
182 Ga0068858_100189267
183 Ga0070717_10177737
184 Ga0075429_100093493
185 Ga0111539_10042269
186 Ga0105245_10096686
187 Ga0114129_10329429
188 Ga0105243_10076488
189 Ga0157373_10119122
190 Ga0182008_10058528
191 Ga0157379_10064712
192 Ga0207707_10099554
193 Ga0207657_10009662
194 Ga0207646_10000371
195 Ga0207646_10199394
196 Ga0207700_10168429
197 Ga0207706_10091949
198 Ga0207691_10144748
199 Ga0207691_10149854
200 Ga0207691_10224893
201 Ga0207661_10156670
202 Ga0207678_10099379
203 Ga0207702_10097832
204 Ga0207702_10127744
205 Ga0207702_10198926
206 Ga0207676_10136391
207 Ga0207675_100338066
208 Ga0207683_10168025
209 Ga0207698_10123324
210 Ga0307515_10000297
211 Ga0265338_10000351
212 Ga0265338_10023514
213 Ga0265320_10064966
214 Ga0265327_10001068
215 Ga0265327_10083289
216 Ga0265316_10021957
217 Ga0316575_10024177
218 Ga0265342_10051594
219 Ga0316576_10016075
220 Ga0316576_10018723
221 Ga0316578_10011173
222 Ga0316577_10010514
223 Ga0307413_10064470
224 Ga0307406_10048938
225 Ga0307412_10045807
226 Ga0316583_10017966
227 Ga0373928_0034500
228 Ga0373934_0070188
229 Ga0316574_0010340
230 Ga0316574_0158940
231 Ga0316582_0015178
232 Ga0373925_0104203
233 Ga0395898_0083940
234 Ga0395905_0010908
235 Ga0395901_0005842
236 Ga0436360_1122129
237 Ga0466969_0012708
238 Ga0466965_0014884
239 Ga0466966_0003177
240 Ga0466961_0003290
241 Ga0466961_0017788
242 Ga0466961_0172466
243 Ga0466963_0000048
244 Ga0466963_0003820
245 Ga0466963_0032351
246 Ga0466963_0035612
247 Ga0466963_0086938
248 Ga0466964_0003327
249 Ga0466964_0004441
250 Ga0466971_0037463
251 Ga0466957_0000628
252 Ga0466957_0087281
253 Ga0466959_0044011
254 Ga0466959_0061112
255 Ga0466958_0000428
256 Ga0466958_0009426
257 Ga0466958_0026498
258 Ga0466958_0026916
259 Ga0466967_0000041
260 Ga0466967_0169616
261 Ga0495603_0010550
262 Ga0495629_0225726
263 Ga0495641_0016557
264 Ga0495653_0029234
265 Ga0495653_0114305
266 Ga0495582_0098762
267 Ga0495664_0049683
268 Ga0495608_0010267
269 Ga0495608_0034392
270 Ga0495618_0039439
271 Ga0495630_0079852
272 Ga0495644_0029169
273 Ga0495640_0020484
274 Ga0495667_0069171
275 Ga0495634_0059990
276 Ga0495635_0142908
277 Ga0495657_0060441
278 Ga0495647_0009818
279 Ga0495658_0038214
280 Ga0495669_0009823
281 Ga0495613_0003879
282 Ga0495671_0089398
283 Ga0495674_0000780
284 Ga0495674_0036942
285 Ga0495684_0007372
286 Ga0496102_0063714
287 Ga0496102_0130833
288 Ga0496104_0003708
289 Ga0496108_0001538
290 Ga0496108_0028035
291 Ga0496108_0151317
292 Ga0496109_0001854
293 Ga0496109_0276502
294 Ga0496110_0000112
295 Ga0496111_0000091
296 Ga0496112_0010054
297 Ga0496112_0112041
298 Ga0496112_0133422
299 Ga0496113_0002639
300 Ga0496114_0053043
301 Ga0496114_0107113
302 Ga0496114_0109554
303 Ga0496115_0038944
304 Ga0496115_0242719
305 Ga0501068_0004894
306 Ga0501069_0123567
307 Ga0501075_0071370
308 Ga0501080_0192924
309 nmdc:mga09592_48579_c1
310 nmdc:mga0n895_150627_c1
311 Ga0495601_0038705
312 Ga0495619_0034263
313 Ga0500556_0001181
314 Ga0500616_0008665
315 Ga0501082_0136016
316 Ga0466962_0011791
317 Ga0466962_0060980
318 Ga0530510_0021143

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01071

GARS_A

Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain

106

298

1

PF02844

GARS_N

Phosphoribosylglycinamide synthetase, N domain

6

105

0.99

PF02843

GARS_C

Phosphoribosylglycinamide synthetase, C domain

333

425

0.95

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

107

205

0.91

PF02655

ATP-grasp_3

ATP-grasp domain

107

296

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lp8-assembly1.cif.gz_A crystal structure of phosphoribosylamine-glycine ligase from ehrlichia chaffeensis 0.9155 1 387
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.9111 1 394
2xd4-assembly1.cif.gz_A nucleotide-bound structures of bacillus subtilis glycinamide ribonucleotide synthetase 0.9088 1 394
2qk4-assembly1.cif.gz_A human glycinamide ribonucleotide synthetase 0.9079 1 392
2yw2-assembly1.cif.gz_A crystal structure of gar synthetase from aquifex aeolicus in complex with atp 0.9074 1 391
ID Description Score Start End Superfamily
3lp8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9821 3 93 3.40.50.20
af_C0PFX3_419_522_3.90.600.10 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.9728 300 393 3.90.600.10
af_P22102_333_434_3.90.600.10 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.9717 298 394 3.90.600.10
af_P9WHM9_2_93_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9653 3 93 3.40.50.20
3lp8A04 Alpha Beta;Alpha-Beta Complex;Glycinamide Ribonucleotide Synthetase; Chain A, domain 4;Phosphoribosylglycinamide synthetase, C-terminal domain 0.9647 298 387 3.90.600.10
ID Description Score Start End GO Terms
AF-A0A3D3G8A4-F1-model_v4 Phosphoribosylamine--glycine ligase 0.9888 2 99 GO:0004637
GO:0009113
AF-A0A2M7U8M5-F1-model_v4 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.9881 1 72 GO:0004637
GO:0009113
AF-A0A353TSF9-F1-model_v4 deleted 0.9876 1 94
AF-A0A3S0NQG1-F1-model_v4 deleted 0.986 1 107
AF-A0A3B9F6K8-F1-model_v4 Glycinamide ribonucleotide synthetase (Phosphoribosylglycinamide synthetase) 0.9846 298 388 GO:0000166
GO:0004637
GO:0009113

Map