F232607

General Info

Members Datasets Scaffolds Average Seq Length
159 79 318 167

Family's Representative Sequence

Representative Sequence 3300035170|Ga0373943_0362417|Ga0373943_0362417_139_708
Length 189
Sequence MERINMATVVYKIGDDVSTDVIYPGRYMATVLPTETPLFAFADDPAFSSRLKEKQIAPGSVLLAGNNFGCGSSREQAVSCLKGHELTIVAKSFARIFLQNAINLGLRTVICPGIEAEEGDALEVTPDVIIDHRTERRFPISPLPDSRQAIIDAGGLIPYTRRRLLEKQEAGFVARWERSIINLTARTNI

Samples

Sample ID Description Type Environment
1 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
5 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
6 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
7 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
8 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
9 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
10 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
11 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
12 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
13 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
16 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
17 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
18 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
19 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
20 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
21 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
22 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
23 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
24 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
25 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
26 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
27 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
28 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
29 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
31 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
32 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
33 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
36 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
37 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
38 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
39 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
42 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
43 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
44 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
45 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
46 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
47 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
48 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
49 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
50 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
51 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
52 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
53 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
54 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
55 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
65 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
66 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
67 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
68 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
69 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
70 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
71 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
74 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
75 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
76 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
77 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
78 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
79 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.37
Metatranscriptomes 0.63
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 11.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373943_0362417 3300035170 Bacteria 832
2 Ga0065707_10009473 3300005295 Bacteria 3751
3 Ga0070705_100406663 3300005440 Bacteria 1009
4 Ga0070684_100342775 3300005535 Bacteria 1374
5 Ga0070702_100271835 3300005615 Bacteria 1159
6 Ga0068863_100099534 3300005841 Bacteria 2762
7 Ga0068871_100650837 3300006358 Bacteria 962
8 Ga0075430_101103614 3300006846 Archaea 653
9 Ga0075429_100008161 3300006880 Bacteria 9104
10 Ga0075429_100055861 3300006880 Bacteria 3436
11 Ga0114129_10020984 3300009147 Bacteria 9278
12 Ga0105246_10098408 3300011119 Unclassified 2125
13 Ga0105246_11498792 3300011119 Unclassified 633
14 Ga0163163_10052002 3300014325 Bacteria 4040
15 Ga0207641_10084158 3300026088 Bacteria 2769
16 Ga0207676_10047186 3300026095 Bacteria 3337
17 Ga0265337_1013143 3300028556 Bacteria 2791
18 Ga0265323_10011879 3300028653 Bacteria 3502
19 Ga0265336_10080845 3300028666 Bacteria 970
20 Ga0265328_10216759 3300031239 Bacteria 729
21 Ga0265327_10000631 3300031251 Bacteria 57438
22 Ga0265327_10054895 3300031251 Bacteria 2060
23 Ga0265316_10342219 3300031344 Unclassified 1084
24 Ga0265316_10492170 3300031344 Bacteria 876
25 Ga0316575_10172190 3300031665 Bacteria 898
26 Ga0316579_10023813 3300031691 Bacteria 2752
27 Ga0265342_10238715 3300031712 Unclassified 974
28 Ga0316576_10053822 3300031727 Bacteria 2933
29 Ga0316576_10121896 3300031727 Bacteria 1958
30 Ga0316576_10256617 3300031727 Bacteria 1312
31 Ga0316576_10374794 3300031727 Unclassified 1057
32 Ga0316576_10454083 3300031727 Bacteria 946
33 Ga0316578_10078751 3300031728 Bacteria 1959
34 Ga0316578_10085263 3300031728 Bacteria 1883
35 Ga0316578_10120640 3300031728 Bacteria 1576
36 Ga0316578_10235014 3300031728 Bacteria 1100
37 Ga0316578_10265164 3300031728 Bacteria 1030
38 Ga0316577_10001713 3300031733 Bacteria 10532
39 Ga0307416_101941281 3300032002 Bacteria 692
40 Ga0316580_10008011 3300032139 Bacteria 3159
41 Ga0316580_10053971 3300032139 Bacteria 1237
42 Ga0316580_10056757 3300032139 Bacteria 1204
43 Ga0316586_1046459 3300033527 Bacteria 771
44 Ga0373951_0001640 3300035091 Bacteria 5869
45 Ga0373932_0050182 3300035112 Bacteria 1236
46 Ga0373941_0182569 3300035115 Bacteria 788
47 Ga0373961_0074741 3300035241 Bacteria 1055
48 Ga0316574_0002094 3300035398 Bacteria 9879
49 Ga0316574_0080487 3300035398 Bacteria 2067
50 Ga0316574_0132330 3300035398 Bacteria 1605
51 Ga0373931_0024947 3300035691 Unclassified 3035
52 Ga0373931_0488838 3300035691 Unclassified 792
53 Ga0316582_0037081 3300036647 Bacteria 3020
54 Ga0316582_0083584 3300036647 Bacteria 2089
55 Ga0316582_0244821 3300036647 Bacteria 1229
56 Ga0316582_0259092 3300036647 Bacteria 1192
57 Ga0316582_0697648 3300036647 Unclassified 697
58 Ga0316584_0016816 3300036712 Bacteria 5248
59 Ga0316584_0082410 3300036712 Bacteria 2409
60 Ga0316584_0267175 3300036712 Bacteria 1246
61 Ga0316584_0307192 3300036712 Bacteria 1147
62 Ga0316584_0338830 3300036712 Bacteria 1081
63 Ga0316584_0629649 3300036712 Unclassified 741
64 Ga0373925_0186910 3300037068 Unclassified 1643
65 Ga0316581_0138270 3300037588 Unclassified 751
66 Ga0451577_0000752 3300042876 Bacteria 49394
67 Ga0451577_0004453 3300042876 Bacteria 14797
68 Ga0451577_0005620 3300042876 Bacteria 12746
69 Ga0451577_0007133 3300042876 Bacteria 11020
70 Ga0451577_0008374 3300042876 Bacteria 10065
71 Ga0451577_0023782 3300042876 Bacteria 5582
72 Ga0451577_0041934 3300042876 Bacteria 4106
73 Ga0451577_0045240 3300042876 Bacteria 3940
74 Ga0451577_0103796 3300042876 Bacteria 2541
75 Ga0451577_0197217 3300042876 Unclassified 1817
76 Ga0451577_0258382 3300042876 Bacteria 1577
77 Ga0451577_0434224 3300042876 Bacteria 1192
78 Ga0451577_0764987 3300042876 Unclassified 873
79 Ga0451577_1592533 3300042876 Bacteria 576
80 Ga0453683_0023292 3300044673 Bacteria 3947
81 Ga0453683_0231710 3300044673 Bacteria 1175
82 Ga0453683_0858857 3300044673 Bacteria 599
83 Ga0453684_0000223 3300044712 Bacteria 249546
84 Ga0453684_0000282 3300044712 Bacteria 219571
85 Ga0453684_0005740 3300044712 Bacteria 24254
86 Ga0453684_0012555 3300044712 Bacteria 13945
87 Ga0453684_0013097 3300044712 Bacteria 13536
88 Ga0453684_0033237 3300044712 Bacteria 7194
89 Ga0453684_0055296 3300044712 Bacteria 5161
90 Ga0453684_0080853 3300044712 Bacteria 4056
91 Ga0453684_0113505 3300044712 Bacteria 3286
92 Ga0453684_0153026 3300044712 Unclassified 2738
93 Ga0453684_0190919 3300044712 Bacteria 2396
94 Ga0453684_0337921 3300044712 Bacteria 1701
95 Ga0453684_0439292 3300044712 Bacteria 1454
96 Ga0453684_0542700 3300044712 Unclassified 1282
97 Ga0453684_0614030 3300044712 Bacteria 1190
98 Ga0453684_0857952 3300044712 Bacteria 975
99 Ga0453684_1293790 3300044712 Bacteria 761
100 Ga0451576_0004634 3300045051 Bacteria 17747
101 Ga0451576_0010404 3300045051 Bacteria 10678
102 Ga0451576_0030988 3300045051 Bacteria 5705
103 Ga0451576_0067143 3300045051 Bacteria 3733
104 Ga0451576_0070810 3300045051 Bacteria 3629
105 Ga0451576_0145801 3300045051 Bacteria 2468
106 Ga0451576_0299347 3300045051 Bacteria 1682
107 Ga0451576_0715939 3300045051 Unclassified 1051
108 Ga0495592_0066759 3300046454 Unclassified 2632
109 Ga0495618_0108589 3300046514 Bacteria 1777
110 Ga0495628_0114884 3300046516 Bacteria 2068
111 Ga0495630_0000157 3300046517 Bacteria 52826
112 Ga0495666_0066768 3300046526 Bacteria 1714
113 Ga0495640_0046124 3300046533 Bacteria 3022
114 Ga0495586_0061743 3300046535 Bacteria 2039
115 Ga0495667_0172882 3300046559 Bacteria 1388
116 Ga0495613_0197418 3300046689 Bacteria 1420
117 Ga0495624_0216334 3300046690 Bacteria 1162
118 Ga0495674_0015467 3300047319 Bacteria 7129
119 Ga0501031_0110303 3300049568 Bacteria 1797
120 Ga0501031_0137846 3300049568 Bacteria 1594
121 Ga0501032_0328211 3300049569 Bacteria 987
122 Ga0501033_0233796 3300049570 Bacteria 1305
123 Ga0501036_0103227 3300049572 Bacteria 2411
124 Ga0501036_0167244 3300049572 Bacteria 1853
125 Ga0501038_0269055 3300049574 Bacteria 1344
126 Ga0501039_0733364 3300049575 Bacteria 772
127 Ga0501040_0300083 3300049576 Bacteria 1148
128 Ga0501041_0073830 3300049577 Bacteria 2096
129 Ga0501041_0667258 3300049577 Bacteria 665
130 Ga0501048_0040553 3300049582 Bacteria 3336
131 Ga0501071_0089979 3300049587 Bacteria 2253
132 Ga0501071_0331084 3300049587 Bacteria 1158
133 Ga0501071_0351180 3300049587 Bacteria 1122
134 Ga0501072_0059009 3300049588 Bacteria 3025
135 Ga0501072_0697191 3300049588 Bacteria 798
136 Ga0501073_0053235 3300049589 Bacteria 2834
137 Ga0501075_0069659 3300049591 Bacteria 2658
138 Ga0501075_0110342 3300049591 Bacteria 2091
139 Ga0501076_0243312 3300049592 Bacteria 1472
140 Ga0501076_0546747 3300049592 Bacteria 955
141 Ga0501076_1336600 3300049592 Unclassified 589
142 Ga0501077_0452662 3300049593 Bacteria 822
143 Ga0501077_0864271 3300049593 Bacteria 582
144 Ga0501080_0162779 3300049742 Bacteria 2060
145 Ga0501081_0128876 3300049743 Bacteria 1806
146 Ga0501081_0153961 3300049743 Bacteria 1653
147 Ga0501035_0402705 3300049822 Bacteria 1138
148 Ga0501045_0174042 3300049824 Bacteria 1604
149 Ga0501045_0184609 3300049824 Bacteria 1554
150 nmdc:mga05p37_494_c1 3300050507 Bacteria 43235
151 nmdc:mga09592_1316_c1 3300050508 Bacteria 19924
152 nmdc:mga09592_74703_c1 3300050508 Bacteria 2880
153 Ga0495601_0053814 3300053077 Bacteria 2545
154 Ga0501084_0102921 3300054114 Bacteria 2398
155 Ga0501082_0521441 3300060353 Bacteria 1039
156 Ga0501082_0651845 3300060353 Bacteria 921
157 Ga0501082_0697690 3300060353 Unclassified 888
158 Ga0530510_0071811 3300061734 Bacteria 2513
159 Ga0530510_0268441 3300061734 Bacteria 1273
160 Ga0373943_0362417
161 Ga0065707_10009473
162 Ga0070705_100406663
163 Ga0070684_100342775
164 Ga0070702_100271835
165 Ga0068863_100099534
166 Ga0068871_100650837
167 Ga0075430_101103614
168 Ga0075429_100008161
169 Ga0075429_100055861
170 Ga0114129_10020984
171 Ga0105246_10098408
172 Ga0105246_11498792
173 Ga0163163_10052002
174 Ga0207641_10084158
175 Ga0207676_10047186
176 Ga0265337_1013143
177 Ga0265323_10011879
178 Ga0265336_10080845
179 Ga0265328_10216759
180 Ga0265327_10000631
181 Ga0265327_10054895
182 Ga0265316_10342219
183 Ga0265316_10492170
184 Ga0316575_10172190
185 Ga0316579_10023813
186 Ga0265342_10238715
187 Ga0316576_10053822
188 Ga0316576_10121896
189 Ga0316576_10256617
190 Ga0316576_10374794
191 Ga0316576_10454083
192 Ga0316578_10078751
193 Ga0316578_10085263
194 Ga0316578_10120640
195 Ga0316578_10235014
196 Ga0316578_10265164
197 Ga0316577_10001713
198 Ga0307416_101941281
199 Ga0316580_10008011
200 Ga0316580_10053971
201 Ga0316580_10056757
202 Ga0316586_1046459
203 Ga0373951_0001640
204 Ga0373932_0050182
205 Ga0373941_0182569
206 Ga0373961_0074741
207 Ga0316574_0002094
208 Ga0316574_0080487
209 Ga0316574_0132330
210 Ga0373931_0024947
211 Ga0373931_0488838
212 Ga0316582_0037081
213 Ga0316582_0083584
214 Ga0316582_0244821
215 Ga0316582_0259092
216 Ga0316582_0697648
217 Ga0316584_0016816
218 Ga0316584_0082410
219 Ga0316584_0267175
220 Ga0316584_0307192
221 Ga0316584_0338830
222 Ga0316584_0629649
223 Ga0373925_0186910
224 Ga0316581_0138270
225 Ga0451577_0000752
226 Ga0451577_0004453
227 Ga0451577_0005620
228 Ga0451577_0007133
229 Ga0451577_0008374
230 Ga0451577_0023782
231 Ga0451577_0041934
232 Ga0451577_0045240
233 Ga0451577_0103796
234 Ga0451577_0197217
235 Ga0451577_0258382
236 Ga0451577_0434224
237 Ga0451577_0764987
238 Ga0451577_1592533
239 Ga0453683_0023292
240 Ga0453683_0231710
241 Ga0453683_0858857
242 Ga0453684_0000223
243 Ga0453684_0000282
244 Ga0453684_0005740
245 Ga0453684_0012555
246 Ga0453684_0013097
247 Ga0453684_0033237
248 Ga0453684_0055296
249 Ga0453684_0080853
250 Ga0453684_0113505
251 Ga0453684_0153026
252 Ga0453684_0190919
253 Ga0453684_0337921
254 Ga0453684_0439292
255 Ga0453684_0542700
256 Ga0453684_0614030
257 Ga0453684_0857952
258 Ga0453684_1293790
259 Ga0451576_0004634
260 Ga0451576_0010404
261 Ga0451576_0030988
262 Ga0451576_0067143
263 Ga0451576_0070810
264 Ga0451576_0145801
265 Ga0451576_0299347
266 Ga0451576_0715939
267 Ga0495592_0066759
268 Ga0495618_0108589
269 Ga0495628_0114884
270 Ga0495630_0000157
271 Ga0495666_0066768
272 Ga0495640_0046124
273 Ga0495586_0061743
274 Ga0495667_0172882
275 Ga0495613_0197418
276 Ga0495624_0216334
277 Ga0495674_0015467
278 Ga0501031_0110303
279 Ga0501031_0137846
280 Ga0501032_0328211
281 Ga0501033_0233796
282 Ga0501036_0103227
283 Ga0501036_0167244
284 Ga0501038_0269055
285 Ga0501039_0733364
286 Ga0501040_0300083
287 Ga0501041_0073830
288 Ga0501041_0667258
289 Ga0501048_0040553
290 Ga0501071_0089979
291 Ga0501071_0331084
292 Ga0501071_0351180
293 Ga0501072_0059009
294 Ga0501072_0697191
295 Ga0501073_0053235
296 Ga0501075_0069659
297 Ga0501075_0110342
298 Ga0501076_0243312
299 Ga0501076_0546747
300 Ga0501076_1336600
301 Ga0501077_0452662
302 Ga0501077_0864271
303 Ga0501080_0162779
304 Ga0501081_0128876
305 Ga0501081_0153961
306 Ga0501035_0402705
307 Ga0501045_0174042
308 Ga0501045_0184609
309 nmdc:mga05p37_494_c1
310 nmdc:mga09592_1316_c1
311 nmdc:mga09592_74703_c1
312 Ga0495601_0053814
313 Ga0501084_0102921
314 Ga0501082_0521441
315 Ga0501082_0651845
316 Ga0501082_0697690
317 Ga0530510_0071811
318 Ga0530510_0268441

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00694

Aconitase_C

Aconitase C-terminal domain

40

112

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vba-assembly2.cif.gz_D crystal structure of methanogen 3-isopropylmalate isomerase small subunit 0.896 3 157
1v7l-assembly1.cif.gz_B structure of 3-isopropylmalate isomerase small subunit from pyrococcus horikoshii 0.8904 2 158
2pkp-assembly1.cif.gz_A crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) 0.8894 3 162
2pkp-assembly1.cif.gz_A crystal structure of 3-isopropylmalate dehydratase (leud)from methhanocaldococcus jannaschii dsm2661 (mj1271) 0.8639 3 162
2hcu-assembly1.cif.gz_A crystal structure of smu.1381 (or leud) from streptococcus mutans 0.7842 2 143
ID Description Score Start End Superfamily
1v7lB01 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.8904 2 158 3.20.19.10
2pkpA01 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.8893 3 158 3.20.19.10
1v7lB01 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.8639 2 158 3.20.19.10
2pkpA01 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.863 3 158 3.20.19.10
af_I1KVC1_66_241_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.8378 3 158 3.20.19.10
ID Description Score Start End GO Terms
AF-A0A2N9NL80-F1-model_v4 Adenylate kinase (AK) (EC 2.7.4.3) (ATP-AMP transphosphorylase) (ATP:AMP phosphotransferase) (Adenylate monophosphate kinase) 0.9759 1 162 GO:0004017
GO:0005524
GO:0005737
GO:0008270
GO:0016829
GO:0044209
AF-A0A7Y8J832-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9754 2 163 GO:0016836
AF-A0A3N5X3K4-F1-model_v4 3-isopropylmalate dehydratase 0.9729 1 163 GO:0016836
AF-A0A257SBL5-F1-model_v4 3-isopropylmalate dehydratase (EC 4.2.1.33) 0.9726 2 162 GO:0016836
AF-A0A1J5C1X1-F1-model_v4 Aconitase A/isopropylmalate dehydratase small subunit swivel domain-containing protein 0.972 18 161 GO:0016836

Map