F232526

General Info

Members Datasets Scaffolds Average Seq Length
159 99 318 104

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10670857|Ga0316576_106708572
Length 121
Sequence MIFTNMIPKLKIYLKELYMSEFKNVSIVREANIYFDGRVTSRSVLFNDGTKKTLGIMLPGEYEFGTEDKEIMEIMSGELEILLPDNDWKSVKGGDSFEVPAKSKFQLRIFTVTDYCCSYIK

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
8 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
9 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
10 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
11 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
12 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
13 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
14 3300027252 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) Metagenome Rhizosphere
15 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
16 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
18 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
19 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
20 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
21 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
22 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
23 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
24 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
25 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
26 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
27 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
28 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
29 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
30 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
31 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
32 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
33 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
34 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
35 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
36 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
37 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
38 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
39 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
42 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
43 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
44 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
45 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
46 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
47 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
48 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
49 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
50 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
51 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
52 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
53 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
54 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
55 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
56 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
57 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
58 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
59 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
60 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
61 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
62 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
67 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
68 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
69 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
70 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
71 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
72 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
73 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
74 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
75 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
76 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
77 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
78 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
79 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
80 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
81 2818991459 Paenibacillus sp. 597 Isolate Unclassified
82 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
83 2857472729 Cohnella sp. R-74144 Isolate Unclassified
84 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
85 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
86 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
87 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
88 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
89 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
90 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
91 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
92 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
93 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
94 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
95 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
96 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
97 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
98 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
99 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 77.99
Metatranscriptomes 2.52
Isolates 19.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.26
Nodule 1.89
Rhizoplane 0.63
Rhizosphere 57.23
Stem 0
Stem Tuber 0
Unclassified 5.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10670857 3300031727 Bacteria 753
2 Ga0065714_10176330 3300005288 Bacteria 972
3 Ga0065704_10200406 3300005289 Bacteria 1149
4 Ga0070700_101026715 3300005441 Unclassified 679
5 Ga0070694_100161133 3300005444 Bacteria 1646
6 Ga0070699_101001588 3300005518 Bacteria 766
7 Ga0070704_100289241 3300005549 Bacteria 1361
8 Ga0079104_1020140 3300006946 Bacteria 1846
9 Ga0105249_10738645 3300009553 Bacteria 1046
10 Ga0157371_10277152 3300013102 Bacteria 1211
11 Ga0209566_100879 3300025225 Bacteria 14627
12 Ga0209675_1004120 3300025291 Bacteria 6607
13 Ga0209281_1034872 3300027111 Bacteria 877
14 Ga0209973_1013488 3300027252 Bacteria 1008
15 Ga0209970_1019689 3300027614 Bacteria 1138
16 Ga0209974_10332578 3300027876 Bacteria 586
17 Ga0265322_10069992 3300028654 Bacteria 995
18 Ga0265330_10183173 3300031235 Bacteria 887
19 Ga0265331_10483260 3300031250 Unclassified 557
20 Ga0265327_10046600 3300031251 Unclassified 2293
21 Ga0265327_10068293 3300031251 Unclassified 1788
22 Ga0265327_10221961 3300031251 Bacteria 850
23 Ga0265316_10023352 3300031344 Bacteria 5197
24 Ga0265316_10023555 3300031344 Bacteria 5170
25 Ga0316575_10010203 3300031665 Bacteria 3445
26 Ga0316579_10413737 3300031691 Bacteria 652
27 Ga0265314_10029545 3300031711 Bacteria 4072
28 Ga0316576_10039610 3300031727 Bacteria 3384
29 Ga0316576_10563757 3300031727 Bacteria 834
30 Ga0316576_10584391 3300031727 Bacteria 816
31 Ga0316577_10065263 3300031733 Bacteria 2032
32 Ga0316585_10187370 3300032137 Bacteria 684
33 Ga0316574_0028707 3300035398 Bacteria 3356
34 Ga0316574_0157932 3300035398 Bacteria 1461
35 Ga0316582_0012036 3300036647 Bacteria 4813
36 Ga0316584_0004023 3300036712 Bacteria 9676
37 Ga0316584_1057830 3300036712 Bacteria 540
38 Ga0395899_0194782 3300037312 Bacteria 1416
39 Ga0400485_09393 3300038735 Unclassified 1167
40 Ga0400488_06041 3300038741 Unclassified 2330
41 Ga0400486_22447 3300038742 Bacteria 1740
42 Ga0400486_24968 3300038742 Bacteria 4585
43 Ga0400483_086034 3300039062 Bacteria 1746
44 Ga0400483_108470 3300039062 Bacteria 8624
45 Ga0400483_134395 3300039062 Bacteria 2929
46 Ga0400483_151153 3300039062 Bacteria 1754
47 Ga0400483_218266 3300039062 Bacteria 5316
48 Ga0400483_280961 3300039062 Bacteria 1196
49 Ga0400489_34251 3300039093 Unclassified 2892
50 Ga0439436_0008636 3300041404 Bacteria 3131
51 Ga0439439_0025748 3300041406 Bacteria 1481
52 Ga0439433_0010152 3300041999 Bacteria 2055
53 Ga0439449_0000994 3300042007 Bacteria 11143
54 Ga0451577_0001414 3300042876 Bacteria 32017
55 Ga0451577_0002427 3300042876 Bacteria 22220
56 Ga0451577_0158414 3300042876 Bacteria 2038
57 Ga0451577_1833896 3300042876 Unclassified 532
58 Ga0466969_0016358 3300044656 Bacteria 3882
59 Ga0453683_0000014 3300044673 Bacteria 364381
60 Ga0453683_0001225 3300044673 Bacteria 22976
61 Ga0453683_0200681 3300044673 Bacteria 1266
62 Ga0466961_0006970 3300044693 Bacteria 7189
63 Ga0453684_0000349 3300044712 Bacteria 192484
64 Ga0453684_0000504 3300044712 Bacteria 152594
65 Ga0453684_0000551 3300044712 Bacteria 141549
66 Ga0453684_0003996 3300044712 Bacteria 32193
67 Ga0453684_0006504 3300044712 Bacteria 22148
68 Ga0453684_0011555 3300044712 Bacteria 14770
69 Ga0453684_0052375 3300044712 Bacteria 5338
70 Ga0453684_0252937 3300044712 Bacteria 2023
71 Ga0453684_0258800 3300044712 Bacteria 1995
72 Ga0453684_0265971 3300044712 Bacteria 1962
73 Ga0453684_0788728 3300044712 Bacteria 1025
74 Ga0453684_0812397 3300044712 Bacteria 1008
75 Ga0453684_0841376 3300044712 Bacteria 987
76 Ga0453684_0935393 3300044712 Bacteria 926
77 Ga0453684_1086362 3300044712 Unclassified 846
78 Ga0453684_1623101 3300044712 Bacteria 663
79 Ga0453684_1795828 3300044712 Bacteria 623
80 Ga0466970_0066292 3300044765 Bacteria 1938
81 Ga0466959_0034400 3300045049 Bacteria 3747
82 Ga0495590_0043318 3300046457 Bacteria 1570
83 Ga0495590_0094882 3300046457 Bacteria 1057
84 Ga0495580_0228889 3300046472 Bacteria 1276
85 Ga0495585_0526491 3300046492 Bacteria 560
86 Ga0495606_0168032 3300046507 Bacteria 1275
87 Ga0495649_0245961 3300046694 Bacteria 920
88 Ga0495600_0736770 3300046809 Bacteria 591
89 Ga0495676_0878414 3300047321 Bacteria 575
90 Ga0496116_0000358 3300048919 Bacteria 71954
91 Ga0496116_0003221 3300048919 Bacteria 16276
92 Ga0496116_0009815 3300048919 Bacteria 8112
93 Ga0496116_0188344 3300048919 Bacteria 1095
94 Ga0496116_0276366 3300048919 Bacteria 817
95 Ga0496119_0000003 3300048922 Bacteria 550563
96 Ga0496119_0002240 3300048922 Bacteria 21521
97 Ga0496120_0000001 3300048923 Bacteria 630849
98 Ga0496120_0001802 3300048923 Bacteria 24027
99 Ga0496120_0024972 3300048923 Bacteria 3717
100 Ga0496120_0102615 3300048923 Bacteria 1508
101 Ga0496122_0000252 3300048925 Bacteria 120561
102 Ga0496122_0000314 3300048925 Bacteria 106928
103 Ga0496122_0009660 3300048925 Bacteria 10097
104 Ga0496122_0013815 3300048925 Bacteria 7863
105 Ga0496122_0147297 3300048925 Bacteria 1460
106 Ga0496122_0394251 3300048925 Bacteria 705
107 Ga0496123_0002848 3300048926 Bacteria 20412
108 Ga0496123_0003284 3300048926 Bacteria 18325
109 Ga0496123_0017621 3300048926 Bacteria 5734
110 Ga0496123_0080992 3300048926 Bacteria 1975
111 Ga0496124_0007033 3300048927 Bacteria 12053
112 Ga0496124_0120451 3300048927 Bacteria 2098
113 Ga0496124_0817343 3300048927 Bacteria 575
114 Ga0496125_0000165 3300048928 Bacteria 147453
115 Ga0496125_0002586 3300048928 Bacteria 23248
116 Ga0496125_0007937 3300048928 Bacteria 11208
117 Ga0496125_0067496 3300048928 Bacteria 2817
118 Ga0496126_0000043 3300048929 Bacteria 337789
119 Ga0496126_0000060 3300048929 Bacteria 264944
120 Ga0496126_0000404 3300048929 Bacteria 87755
121 Ga0496126_0678018 3300048929 Bacteria 803
122 Ga0501306_000632 3300049127 Bacteria 2821
123 Ga0501309_000768 3300049129 Bacteria 2813
124 Ga0501305_001281 3300049161 Bacteria 2416
125 Ga0501312_000393 3300049528 Bacteria 3398
126 Ga0501208_034890 3300049655 Bacteria 906
127 Ga0501217_050700 3300049661 Bacteria 1084
128 Ga0501236_078106 3300049670 Bacteria 616
129 2556064763 2554235469 Bacteria 3590176
130 2563925945 2563366752 Bacteria 4961801
131 2573039103 2571042588 Bacteria 5045676
132 2578335789 2576861424 Bacteria 5270569
133 2580933183 2579778775 Bacteria 5360914
134 2587743022 2585428059 Bacteria 8696589
135 2595318190 2593339198 Bacteria 7267884
136 2601639673 2600255286 Bacteria 5390125
137 2621273974 2619619294 Bacteria 5575484
138 2644425433 2643221676 Bacteria 8119172
139 2740991191 2740891818 Bacteria 6711283
140 2793183483 2791355222 Bacteria 5898266
141 2819671187 2818991459 Bacteria 8736032
142 2857455460 2857453340 Bacteria 8090534
143 2857475593 2857472729 Bacteria 6568124
144 2864999823 2864997549 Bacteria 5139696
145 2865004987 2865002811 Bacteria 6333767
146 2881640687 2881636855 Bacteria 5205297
147 2904120096 2904113452 Bacteria 7796941
148 2904756582 2904755435 Bacteria 7986759
149 2907204710 2907202186 Bacteria 6632024
150 2919425608 2919425241 Bacteria 8055701
151 2919500969 2919497567 Bacteria 4408621
152 2956897346 2956897341 Bacteria 5447711
153 2971414691 2971410472 Bacteria 8311090
154 2971514832 2971511577 Bacteria 5404012
155 2980129228 2980125574 Bacteria 5567337
156 2980180938 2980176882 Bacteria 5397533
157 2980183147 2980182181 Bacteria 9454109
158 8054801532 8054795415 Bacteria 9785225
159 8056533352 8056533031 Bacteria 8964429
160 Ga0316576_10670857
161 Ga0065714_10176330
162 Ga0065704_10200406
163 Ga0070700_101026715
164 Ga0070694_100161133
165 Ga0070699_101001588
166 Ga0070704_100289241
167 Ga0079104_1020140
168 Ga0105249_10738645
169 Ga0157371_10277152
170 Ga0209566_100879
171 Ga0209675_1004120
172 Ga0209281_1034872
173 Ga0209973_1013488
174 Ga0209970_1019689
175 Ga0209974_10332578
176 Ga0265322_10069992
177 Ga0265330_10183173
178 Ga0265331_10483260
179 Ga0265327_10046600
180 Ga0265327_10068293
181 Ga0265327_10221961
182 Ga0265316_10023352
183 Ga0265316_10023555
184 Ga0316575_10010203
185 Ga0316579_10413737
186 Ga0265314_10029545
187 Ga0316576_10039610
188 Ga0316576_10563757
189 Ga0316576_10584391
190 Ga0316577_10065263
191 Ga0316585_10187370
192 Ga0316574_0028707
193 Ga0316574_0157932
194 Ga0316582_0012036
195 Ga0316584_0004023
196 Ga0316584_1057830
197 Ga0395899_0194782
198 Ga0400485_09393
199 Ga0400488_06041
200 Ga0400486_22447
201 Ga0400486_24968
202 Ga0400483_086034
203 Ga0400483_108470
204 Ga0400483_134395
205 Ga0400483_151153
206 Ga0400483_218266
207 Ga0400483_280961
208 Ga0400489_34251
209 Ga0439436_0008636
210 Ga0439439_0025748
211 Ga0439433_0010152
212 Ga0439449_0000994
213 Ga0451577_0001414
214 Ga0451577_0002427
215 Ga0451577_0158414
216 Ga0451577_1833896
217 Ga0466969_0016358
218 Ga0453683_0000014
219 Ga0453683_0001225
220 Ga0453683_0200681
221 Ga0466961_0006970
222 Ga0453684_0000349
223 Ga0453684_0000504
224 Ga0453684_0000551
225 Ga0453684_0003996
226 Ga0453684_0006504
227 Ga0453684_0011555
228 Ga0453684_0052375
229 Ga0453684_0252937
230 Ga0453684_0258800
231 Ga0453684_0265971
232 Ga0453684_0788728
233 Ga0453684_0812397
234 Ga0453684_0841376
235 Ga0453684_0935393
236 Ga0453684_1086362
237 Ga0453684_1623101
238 Ga0453684_1795828
239 Ga0466970_0066292
240 Ga0466959_0034400
241 Ga0495590_0043318
242 Ga0495590_0094882
243 Ga0495580_0228889
244 Ga0495585_0526491
245 Ga0495606_0168032
246 Ga0495649_0245961
247 Ga0495600_0736770
248 Ga0495676_0878414
249 Ga0496116_0000358
250 Ga0496116_0003221
251 Ga0496116_0009815
252 Ga0496116_0188344
253 Ga0496116_0276366
254 Ga0496119_0000003
255 Ga0496119_0002240
256 Ga0496120_0000001
257 Ga0496120_0001802
258 Ga0496120_0024972
259 Ga0496120_0102615
260 Ga0496122_0000252
261 Ga0496122_0000314
262 Ga0496122_0009660
263 Ga0496122_0013815
264 Ga0496122_0147297
265 Ga0496122_0394251
266 Ga0496123_0002848
267 Ga0496123_0003284
268 Ga0496123_0017621
269 Ga0496123_0080992
270 Ga0496124_0007033
271 Ga0496124_0120451
272 Ga0496124_0817343
273 Ga0496125_0000165
274 Ga0496125_0002586
275 Ga0496125_0007937
276 Ga0496125_0067496
277 Ga0496126_0000043
278 Ga0496126_0000060
279 Ga0496126_0000404
280 Ga0496126_0678018
281 Ga0501306_000632
282 Ga0501309_000768
283 Ga0501305_001281
284 Ga0501312_000393
285 Ga0501208_034890
286 Ga0501217_050700
287 Ga0501236_078106
288 2556064763
289 2563925945
290 2573039103
291 2578335789
292 2580933183
293 2587743022
294 2595318190
295 2601639673
296 2621273974
297 2644425433
298 2740991191
299 2793183483
300 2819671187
301 2857455460
302 2857475593
303 2864999823
304 2865004987
305 2881640687
306 2904120096
307 2904756582
308 2907204710
309 2919425608
310 2919500969
311 2956897346
312 2971414691
313 2971514832
314 2980129228
315 2980180938
316 2980183147
317 8054801532
318 8056533352

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06865

Ppnp

Pyrimidine/purine nucleoside phosphorylase

29

119

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hqx-assembly1.cif.gz_A-2 crystal structure of protein of unknown function (duf1255,pf06865) from acinetobacter sp. adp1 0.9815 3 103
7eyp-assembly1.cif.gz_B crystal structure of pseudomonas aeruginosa ppnp 0.9662 12 103
7eym-assembly1.cif.gz_B crystal structure of vibrio cholerae ppnp 0.9654 12 103
3hqx-assembly1.cif.gz_A-2 crystal structure of protein of unknown function (duf1255,pf06865) from acinetobacter sp. adp1 0.9537 3 103
7eyl-assembly1.cif.gz_B crystal structure of salmonella enterica ppnp 0.9533 12 103
ID Description Score Start End Superfamily
3hqxA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.968 3 103 2.60.120.10
af_P0C037_1_93_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9668 12 102 2.60.120.10
2oyzA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9412 8 103 2.60.120.10
3hqxA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9405 3 103 2.60.120.10
af_P0C037_1_93_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9363 12 102 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A661UVU4-F1-model_v4 Pyrimidine/purine nucleoside phosphorylase 1.002 39 103 GO:0004731
GO:0005829
GO:0016154
AF-A0A359K988-F1-model_v4 deleted 1.001 36 103
AF-A0A2X2UYK1-F1-model_v4 Uncharacterized protein conserved in bacteria 1.001 39 103 GO:0004731
GO:0005829
GO:0016154
AF-A0A366G8F3-F1-model_v4 Uncharacterized protein 1 39 103 GO:0004731
GO:0005829
GO:0016154
AF-A0KRT7-F1-model_v4 Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (Inosine phosphorylase) (Thymidine phosphorylase) (Uridine phosphorylase) (Xanthosine phosphorylase) 0.9997 1 103 GO:0004731
GO:0004850
GO:0005829
GO:0009032
GO:0047847
GO:0047975

Map