F231668

General Info

Members Datasets Scaffolds Average Seq Length
159 113 318 554

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100000313|Ga0070665_10000031370
Length 642
Sequence VIAELNPALSELIELGRKRGWLSYEELNNTLPDEMVDPERLDELLVLIDRLGIELVDELEFKARRFRAQKAEEKPGVLPKLFRAMTVAGGEREAESAQLRQKLNVTDTPLPPSAAASQALAKPDAETPARDWDEPVPFELGAKRIDDPVRMYLSQMGTIPLLTREEEIRLAKKIETTRMIFRRRCLESDYVVHQAVETLKLVHTGDLPFDRTMRISTAETNAKEKIAKRIPFNLRTIEKLLELNRSDWELLHQAKKTGDADSTKQLRSRLAMRRRRMAALPDDVAVIKEELEGLRSLVREEPSELTRRVRAIKTVFWEYEQAKRDLSGGNLRLVVSIAKKYRNRGLPFLDIIQEGNTGLMRAVDKYEYKRGYKFSTYATWWIRQAITRAIADHARTIRIPVHMIETMTKLRNIQKMALQESGREPTIEELSDKLGISATEVRRVIKISRHPVSLDKPVGESEDSFFGDFIEDERQSAPSDAAAHDMLKARIEVVLKTLTYREREIIKLRYGIGDGYTYTLEEVGRIFKVTRERVRQVEAKAIRKLQHPVRARKLQGFVDGSVYKEVRGEMDSASHVIDREQMLTRVEQFSADDTEMPDDMGDELPDEPMEALGGPSGSATTDHLPGADIPEISDDDSASEVD

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
34 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
35 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
57 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
104 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
105 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
106 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
107 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 2671180531 Gemmata sp. SH-PL17 Isolate Unclassified
111 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
112 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
113 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.97
Metatranscriptomes 2.52
Isolates 2.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.81
Nodule 0
Rhizoplane 2.52
Rhizosphere 86.79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100000313 3300005548 Bacteria 75686
2 Ga0070658_10005041 3300005327 Bacteria 10751
3 Ga0070669_100057726 3300005353 Bacteria 2848
4 Ga0070675_100008958 3300005354 Bacteria 7777
5 Ga0070673_100055687 3300005364 Bacteria 3116
6 Ga0070714_100007536 3300005435 Bacteria 8471
7 Ga0070665_100000298 3300005548 Bacteria 77675
8 Ga0070665_100000727 3300005548 Bacteria 43903
9 Ga0068855_100175337 3300005563 Bacteria 2426
10 Ga0068857_100013560 3300005577 Bacteria 7100
11 Ga0068856_100000747 3300005614 Bacteria 35242
12 Ga0068859_100047729 3300005617 Bacteria 4302
13 Ga0068866_10000030 3300005718 Bacteria 57549
14 Ga0068858_100021616 3300005842 Bacteria 6014
15 Ga0081455_10081524 3300005937 Bacteria 2649
16 Ga0075363_100008411 3300006048 Bacteria 4802
17 Ga0075364_10000409 3300006051 Bacteria 21411
18 Ga0075362_10000005 3300006177 Bacteria 133842
19 Ga0075367_10003382 3300006178 Bacteria 7595
20 Ga0075370_10000528 3300006353 Bacteria 14602
21 Ga0075428_100004050 3300006844 Bacteria 16107
22 Ga0075428_100037888 3300006844 Bacteria 5306
23 Ga0075428_100078879 3300006844 Bacteria 3594
24 Ga0075430_100010874 3300006846 Bacteria 7709
25 Ga0075430_100056108 3300006846 Bacteria 3312
26 Ga0075431_100004189 3300006847 Bacteria 14113
27 Ga0075431_100045506 3300006847 Bacteria 4525
28 Ga0075431_100094147 3300006847 Bacteria 3092
29 Ga0075429_100027275 3300006880 Bacteria 4957
30 Ga0097620_100047728 3300006931 Bacteria 4302
31 Ga0099794_10006669 3300007265 Bacteria 4690
32 Ga0105240_10001389 3300009093 Bacteria 41618
33 Ga0105240_10055832 3300009093 Bacteria 4944
34 Ga0111539_10000617 3300009094 Bacteria 46095
35 Ga0111539_10003482 3300009094 Bacteria 20746
36 Ga0111539_10011970 3300009094 Bacteria 10877
37 Ga0111539_10014199 3300009094 Bacteria 9947
38 Ga0105242_10000030 3300009176 Bacteria 101449
39 Ga0105242_10000577 3300009176 Bacteria 29049
40 Ga0105238_10008517 3300009551 Bacteria 10264
41 Ga0105238_10048404 3300009551 Bacteria 4285
42 Ga0105238_10086786 3300009551 Bacteria 3116
43 Ga0105249_10019616 3300009553 Bacteria 6034
44 Ga0105239_10000143 3300010375 Bacteria 101449
45 Ga0157379_10091792 3300014968 Bacteria 2724
46 Ga0157376_10004010 3300014969 Bacteria 10186
47 Ga0206355_1417178 3300020076 Bacteria 2497
48 Ga0213872_10026106 3300021361 Bacteria 2684
49 Ga0207642_10000009 3300025899 Bacteria 101441
50 Ga0207705_10011256 3300025909 Bacteria 6484
51 Ga0207695_10000124 3300025913 Bacteria 230517
52 Ga0207695_10004179 3300025913 Bacteria 19841
53 Ga0207695_10054657 3300025913 Bacteria 4167
54 Ga0207660_10051920 3300025917 Bacteria 2917
55 Ga0207646_10075049 3300025922 Bacteria 3021
56 Ga0207681_10061868 3300025923 Bacteria 2575
57 Ga0207694_10027790 3300025924 Bacteria 4310
58 Ga0207686_10000058 3300025934 Bacteria 101458
59 Ga0207686_10004743 3300025934 Bacteria 7292
60 Ga0207667_10073779 3300025949 Bacteria 3545
61 Ga0207703_10011322 3300026035 Bacteria 6938
62 Ga0207702_10000285 3300026078 Bacteria 58642
63 Ga0207674_10001142 3300026116 Bacteria 34430
64 Ga0209588_1002543 3300027671 Bacteria 4949
65 Ga0207428_10006075 3300027907 Bacteria 11170
66 Ga0207428_10008878 3300027907 Bacteria 9055
67 Ga0268266_10000222 3300028379 Bacteria 98723
68 Ga0268266_10002555 3300028379 Bacteria 19322
69 Ga0268266_10013177 3300028379 Bacteria 7130
70 Ga0268266_10162914 3300028379 Bacteria 2019
71 Ga0265338_10012306 3300028800 Bacteria 9765
72 Ga0265338_10065139 3300028800 Bacteria 3164
73 Ga0265760_10001382 3300031090 Bacteria 7121
74 Ga0265325_10001193 3300031241 Bacteria 18508
75 Ga0265339_10001148 3300031249 Bacteria 19970
76 Ga0265339_10001166 3300031249 Bacteria 19833
77 Ga0265339_10005786 3300031249 Bacteria 8209
78 Ga0265331_10000272 3300031250 Bacteria 57459
79 Ga0265316_10000059 3300031344 Bacteria 114919
80 Ga0265313_10003805 3300031595 Bacteria 11940
81 Ga0316575_10001466 3300031665 Bacteria 7612
82 Ga0265314_10000828 3300031711 Bacteria 36769
83 Ga0265314_10009240 3300031711 Bacteria 8351
84 Ga0316593_10016432 3300032168 Bacteria 2243
85 Ga0373947_0062715 3300035725 Bacteria 2263
86 Ga0373937_0005002 3300036401 Bacteria 11282
87 Ga0373925_0002801 3300037068 Bacteria 13766
88 Ga0373925_0007738 3300037068 Bacteria 7822
89 Ga0451577_0019367 3300042876 Bacteria 6258
90 Ga0453684_0000017 3300044712 Bacteria 925696
91 Ga0453684_0001985 3300044712 Bacteria 52460
92 Ga0453684_0003896 3300044712 Bacteria 32782
93 Ga0453684_0073363 3300044712 Bacteria 4315
94 Ga0451576_0000298 3300045051 Bacteria 120202
95 Ga0451576_0001662 3300045051 Bacteria 36927
96 Ga0451576_0004087 3300045051 Bacteria 19268
97 Ga0495580_0001668 3300046472 Bacteria 19499
98 Ga0495630_0003736 3300046517 Bacteria 10618
99 Ga0495630_0019596 3300046517 Bacteria 4975
100 Ga0495667_0076979 3300046559 Bacteria 2170
101 Ga0495635_0076960 3300046663 Bacteria 2286
102 Ga0495624_0006835 3300046690 Bacteria 8051
103 Ga0495636_0008957 3300047318 Bacteria 3942
104 Ga0495684_0003216 3300047471 Bacteria 12818
105 Ga0496104_0039690 3300048907 Bacteria 4408
106 Ga0496105_0006657 3300048908 Bacteria 8895
107 Ga0496108_0225134 3300048911 Bacteria 1630
108 Ga0496111_0092968 3300048914 Bacteria 2211
109 Ga0496117_0098382 3300048920 Bacteria 1860
110 Ga0501031_0000504 3300049568 Bacteria 22857
111 Ga0501031_0079201 3300049568 Bacteria 2141
112 Ga0501032_0004843 3300049569 Bacteria 10089
113 Ga0501033_0002406 3300049570 Bacteria 15921
114 Ga0501033_0084143 3300049570 Bacteria 2331
115 Ga0501034_0000407 3300049571 Bacteria 72634
116 Ga0501034_0022596 3300049571 Bacteria 6407
117 Ga0501034_0068020 3300049571 Bacteria 3573
118 Ga0501037_0036783 3300049573 Bacteria 3607
119 Ga0501038_0000235 3300049574 Bacteria 46840
120 Ga0501043_0001408 3300049579 Bacteria 21014
121 Ga0501046_0000077 3300049580 Bacteria 103098
122 Ga0501047_0016808 3300049581 Bacteria 6989
123 Ga0501048_0015272 3300049582 Bacteria 5671
124 Ga0501073_0000961 3300049589 Bacteria 20745
125 Ga0501259_000420 3300049688 Bacteria 6736
126 Ga0501080_0056658 3300049742 Bacteria 3649
127 Ga0501083_0000132 3300049744 Bacteria 51263
128 Ga0501083_0016200 3300049744 Bacteria 5220
129 Ga0501035_0009205 3300049822 Bacteria 9183
130 Ga0501035_0010295 3300049822 Bacteria 8673
131 Ga0501044_0000060 3300049823 Bacteria 133279
132 Ga0501044_0000821 3300049823 Bacteria 37418
133 Ga0501044_0004522 3300049823 Bacteria 15554
134 Ga0501044_0005570 3300049823 Bacteria 13976
135 Ga0501044_0167264 3300049823 Bacteria 2172
136 nmdc:mga03683_1_c2 3300050489 Bacteria 239664
137 nmdc:mga03n38_512_c1 3300050490 Bacteria 9783
138 nmdc:mga00v17_662_c1 3300050491 Bacteria 18969
139 nmdc:mga06z11_27342_c1 3300050494 Bacteria 2726
140 nmdc:mga06z11_5208_c1 3300050494 Bacteria 5196
141 nmdc:mga07m45_1170_c1 3300050496 Bacteria 11805
142 nmdc:mga09592_91740_c1 3300050508 Bacteria 2596
143 nmdc:mga0qj67_49794_c1 3300050509 Bacteria 3311
144 nmdc:mga06r32_37614_c1 3300050510 Bacteria 4578
145 nmdc:mga06r32_71332_c1 3300050510 Bacteria 3361
146 nmdc:mga08y16_2091_c1 3300050511 Bacteria 20496
147 nmdc:mga08y16_23380_c1 3300050511 Bacteria 6529
148 nmdc:mga0a205_35_c1 3300050515 Bacteria 48001
149 Ga0495601_0000513 3300053077 Bacteria 20410
150 Ga0500595_000034 3300053119 Bacteria 106740
151 Ga0500616_0001117 3300053153 Bacteria 27722
152 Ga0500638_000010 3300053162 Bacteria 112743
153 Ga0501084_0046283 3300054114 Bacteria 3644
154 Ga0501084_0164067 3300054114 Bacteria 1875
155 Ga0587071_002889 3300060344 Bacteria 2393
156 2673166413 2671180531 Bacteria 9045424
157 2688065837 2687453257 Bacteria 6784659
158 2889421814 2889415604 Bacteria 8048700
159 2920111669 2920107658 Bacteria 10042636
160 Ga0070665_100000313
161 Ga0070658_10005041
162 Ga0070669_100057726
163 Ga0070675_100008958
164 Ga0070673_100055687
165 Ga0070714_100007536
166 Ga0070665_100000298
167 Ga0070665_100000727
168 Ga0068855_100175337
169 Ga0068857_100013560
170 Ga0068856_100000747
171 Ga0068859_100047729
172 Ga0068866_10000030
173 Ga0068858_100021616
174 Ga0081455_10081524
175 Ga0075363_100008411
176 Ga0075364_10000409
177 Ga0075362_10000005
178 Ga0075367_10003382
179 Ga0075370_10000528
180 Ga0075428_100004050
181 Ga0075428_100037888
182 Ga0075428_100078879
183 Ga0075430_100010874
184 Ga0075430_100056108
185 Ga0075431_100004189
186 Ga0075431_100045506
187 Ga0075431_100094147
188 Ga0075429_100027275
189 Ga0097620_100047728
190 Ga0099794_10006669
191 Ga0105240_10001389
192 Ga0105240_10055832
193 Ga0111539_10000617
194 Ga0111539_10003482
195 Ga0111539_10011970
196 Ga0111539_10014199
197 Ga0105242_10000030
198 Ga0105242_10000577
199 Ga0105238_10008517
200 Ga0105238_10048404
201 Ga0105238_10086786
202 Ga0105249_10019616
203 Ga0105239_10000143
204 Ga0157379_10091792
205 Ga0157376_10004010
206 Ga0206355_1417178
207 Ga0213872_10026106
208 Ga0207642_10000009
209 Ga0207705_10011256
210 Ga0207695_10000124
211 Ga0207695_10004179
212 Ga0207695_10054657
213 Ga0207660_10051920
214 Ga0207646_10075049
215 Ga0207681_10061868
216 Ga0207694_10027790
217 Ga0207686_10000058
218 Ga0207686_10004743
219 Ga0207667_10073779
220 Ga0207703_10011322
221 Ga0207702_10000285
222 Ga0207674_10001142
223 Ga0209588_1002543
224 Ga0207428_10006075
225 Ga0207428_10008878
226 Ga0268266_10000222
227 Ga0268266_10002555
228 Ga0268266_10013177
229 Ga0268266_10162914
230 Ga0265338_10012306
231 Ga0265338_10065139
232 Ga0265760_10001382
233 Ga0265325_10001193
234 Ga0265339_10001148
235 Ga0265339_10001166
236 Ga0265339_10005786
237 Ga0265331_10000272
238 Ga0265316_10000059
239 Ga0265313_10003805
240 Ga0316575_10001466
241 Ga0265314_10000828
242 Ga0265314_10009240
243 Ga0316593_10016432
244 Ga0373947_0062715
245 Ga0373937_0005002
246 Ga0373925_0002801
247 Ga0373925_0007738
248 Ga0451577_0019367
249 Ga0453684_0000017
250 Ga0453684_0001985
251 Ga0453684_0003896
252 Ga0453684_0073363
253 Ga0451576_0000298
254 Ga0451576_0001662
255 Ga0451576_0004087
256 Ga0495580_0001668
257 Ga0495630_0003736
258 Ga0495630_0019596
259 Ga0495667_0076979
260 Ga0495635_0076960
261 Ga0495624_0006835
262 Ga0495636_0008957
263 Ga0495684_0003216
264 Ga0496104_0039690
265 Ga0496105_0006657
266 Ga0496108_0225134
267 Ga0496111_0092968
268 Ga0496117_0098382
269 Ga0501031_0000504
270 Ga0501031_0079201
271 Ga0501032_0004843
272 Ga0501033_0002406
273 Ga0501033_0084143
274 Ga0501034_0000407
275 Ga0501034_0022596
276 Ga0501034_0068020
277 Ga0501037_0036783
278 Ga0501038_0000235
279 Ga0501043_0001408
280 Ga0501046_0000077
281 Ga0501047_0016808
282 Ga0501048_0015272
283 Ga0501073_0000961
284 Ga0501259_000420
285 Ga0501080_0056658
286 Ga0501083_0000132
287 Ga0501083_0016200
288 Ga0501035_0009205
289 Ga0501035_0010295
290 Ga0501044_0000060
291 Ga0501044_0000821
292 Ga0501044_0004522
293 Ga0501044_0005570
294 Ga0501044_0167264
295 nmdc:mga03683_1_c2
296 nmdc:mga03n38_512_c1
297 nmdc:mga00v17_662_c1
298 nmdc:mga06z11_27342_c1
299 nmdc:mga06z11_5208_c1
300 nmdc:mga07m45_1170_c1
301 nmdc:mga09592_91740_c1
302 nmdc:mga0qj67_49794_c1
303 nmdc:mga06r32_37614_c1
304 nmdc:mga06r32_71332_c1
305 nmdc:mga08y16_2091_c1
306 nmdc:mga08y16_23380_c1
307 nmdc:mga0a205_35_c1
308 Ga0495601_0000513
309 Ga0500595_000034
310 Ga0500616_0001117
311 Ga0500638_000010
312 Ga0501084_0046283
313 Ga0501084_0164067
314 Ga0587071_002889
315 2673166413
316 2688065837
317 2889421814
318 2920111669

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04542

Sigma70_r2

Sigma-70 region 2

327

396

0.97

PF04545

Sigma70_r4

Sigma-70, region 4

494

547

0.97

PF00140

Sigma70_r1_2

Sigma-70 factor, region 1.2

147

178

0.97

PF04539

Sigma70_r3

Sigma-70 region 3

405

482

0.96

PF03979

Sigma70_r1_1

Sigma-70 factor, region 1.1

5

76

0.86

Map