F230316

General Info

Members Datasets Scaffolds Average Seq Length
158 129 132 393

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0011563|Ga0466963_0011563_4038_5321
Length 427
Sequence VEPDSVRILLFTGKGGVGKTTLAAATAARLARAGRKALVISTDPAHSLGDALDVPLGSEPTEVESGLFAAHLDSRALVEAAWGELRGHLRTVLAGAGVDELVADELSWLPGAEELLALGEVRRLAQAGPWDVVIVDCGPTAETLRLLGLPEAIGGYLERLYPAHRRAVRGLLAGIAGGASRPGPGAGLRWDAVAEALSRLAERVAALRAMLADHDNTSIRLVLTPERLVAAESRRTMTALALHGLRVDGIIANRVVPPIAPSVRGPAARWVRARHAEQREVLAELSALWGTKPASPATNRVVRAVPYTAAEPIGVSALAELADAVYGDDEPLAGADAPPLLSVRRVGGDGTALDSEFELSLRLPGLTRNTPLELTRIDDDLAVTVGGVRRLVALPSALARCEVLGARVTVDELLVLFRPDPAVWMAR

Samples

Sample ID Description Type Environment
1 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
2 2558860280 Kutzneria sp. 744 Isolate Unclassified
3 2582580736 Prauserella sp. Am3 Isolate Unclassified
4 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
5 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
6 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
7 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
8 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
9 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
10 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
11 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
12 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
13 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
14 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
15 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
16 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
17 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
18 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
19 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
20 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
21 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
22 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
23 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
25 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
26 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
60 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
94 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
127 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
128 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere
129 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.54
Metatranscriptomes 0
Isolates 16.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.63
Nodule 0
Rhizoplane 6.33
Rhizosphere 69.62
Stem 0
Stem Tuber 0.63
Unclassified 22.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002925 3300003203 Bacteria 8054
2 rootH2_10126301 3300003320 Bacteria 1896
3 Ga0070676_10042179 3300005328 Bacteria 2648
4 Ga0070670_100101012 3300005331 Bacteria 2484
5 Ga0068868_100055556 3300005338 Bacteria 3124
6 Ga0070692_10059491 3300005345 Bacteria 2009
7 Ga0070668_100002705 3300005347 Bacteria 13045
8 Ga0070668_100038560 3300005347 Bacteria 3652
9 Ga0070671_100000468 3300005355 Bacteria 28118
10 Ga0070659_100094211 3300005366 Bacteria 2404
11 Ga0070714_100074409 3300005435 Bacteria 2945
12 Ga0070663_100014107 3300005455 Bacteria 5121
13 Ga0070662_100016972 3300005457 Bacteria 4895
14 Ga0070685_10075925 3300005466 Bacteria 2003
15 Ga0068853_100064130 3300005539 Bacteria 3184
16 Ga0070665_100022495 3300005548 Bacteria 6345
17 Ga0070665_100104420 3300005548 Bacteria 2836
18 Ga0068857_100264779 3300005577 Bacteria 1578
19 Ga0068854_100032918 3300005578 Bacteria 3610
20 Ga0068856_100146021 3300005614 Bacteria 2373
21 Ga0068852_100054826 3300005616 Bacteria 3438
22 Ga0068852_100116922 3300005616 Bacteria 2434
23 Ga0068859_100201210 3300005617 Bacteria 2076
24 Ga0068864_100262401 3300005618 Bacteria 1607
25 Ga0068863_100005631 3300005841 Bacteria 12307
26 Ga0068863_100035325 3300005841 Bacteria 4761
27 Ga0068858_100017416 3300005842 Bacteria 6739
28 Ga0068858_100028241 3300005842 Bacteria 5213
29 Ga0068860_100014517 3300005843 Bacteria 7709
30 Ga0081455_10000093 3300005937 Bacteria 97067
31 Ga0081539_10000242 3300005985 Bacteria 127897
32 Ga0097620_100201217 3300006931 Bacteria 2076
33 Ga0105245_10069080 3300009098 Bacteria 3203
34 Ga0105243_10272472 3300009148 Bacteria 1520
35 Ga0105241_10274939 3300009174 Bacteria 1436
36 Ga0163162_10156763 3300013306 Bacteria 2397
37 Ga0157372_10146675 3300013307 Bacteria 2721
38 Ga0157375_10060693 3300013308 Bacteria 3752
39 Ga0157375_10261364 3300013308 Bacteria 1893
40 Ga0157380_10125738 3300014326 Bacteria 2179
41 Ga0182008_10124901 3300014497 Bacteria 1280
42 Ga0157379_10010044 3300014968 Bacteria 8248
43 Ga0157379_10059716 3300014968 Bacteria 3410
44 Ga0213875_10001548 3300021388 Bacteria 14748
45 Ga0207656_10058716 3300025321 Bacteria 1681
46 Ga0207645_10009482 3300025907 Bacteria 6729
47 Ga0207649_10072620 3300025920 Bacteria 2202
48 Ga0207694_10058180 3300025924 Bacteria 3006
49 Ga0207687_10149403 3300025927 Bacteria 1781
50 Ga0207664_10010001 3300025929 Bacteria 6684
51 Ga0207664_10275616 3300025929 Bacteria 1475
52 Ga0207644_10020442 3300025931 Bacteria 4501
53 Ga0207706_10059832 3300025933 Bacteria 3355
54 Ga0207709_10090314 3300025935 Bacteria 2000
55 Ga0207709_10121584 3300025935 Bacteria 1764
56 Ga0207670_10079766 3300025936 Bacteria 2286
57 Ga0207689_10062615 3300025942 Bacteria 3060
58 Ga0207667_10280315 3300025949 Bacteria 1703
59 Ga0207712_10228502 3300025961 Bacteria 1492
60 Ga0207668_10018699 3300025972 Bacteria 4368
61 Ga0207668_10018759 3300025972 Bacteria 4361
62 Ga0207678_10000340 3300026067 Bacteria 42133
63 Ga0207708_10020562 3300026075 Bacteria 4978
64 Ga0207708_10030806 3300026075 Bacteria 4069
65 Ga0207641_10004306 3300026088 Bacteria 12364
66 Ga0207641_10024103 3300026088 Bacteria 5015
67 Ga0207674_10115630 3300026116 Bacteria 2654
68 Ga0207675_100006067 3300026118 Bacteria 11498
69 Ga0207675_100006955 3300026118 Bacteria 10701
70 Ga0207683_10109479 3300026121 Bacteria 2473
71 Ga0207683_10142700 3300026121 Bacteria 2158
72 Ga0207698_10094580 3300026142 Bacteria 2457
73 Ga0268266_10005098 3300028379 Bacteria 12381
74 Ga0268266_10050039 3300028379 Bacteria 3584
75 Ga0268266_10136762 3300028379 Bacteria 2195
76 Ga0268265_10161753 3300028380 Bacteria 1902
77 Ga0268264_10022989 3300028381 Bacteria 5087
78 Ga0268264_10069539 3300028381 Bacteria 2978
79 Ga0307515_10048447 3300028794 Bacteria 6424
80 Ga0307512_10008970 3300030522 Bacteria 9689
81 Ga0307513_10032149 3300031456 Bacteria 5922
82 Ga0307508_10247863 3300031616 Bacteria 1378
83 Ga0307413_10000377 3300031824 Bacteria 14304
84 Ga0307518_10012280 3300031838 Bacteria 6124
85 Ga0307518_10058346 3300031838 Bacteria 2803
86 Ga0307410_10072089 3300031852 Bacteria 2398
87 Ga0307507_10035406 3300033179 Bacteria 5129
88 Ga0307510_10031694 3300033180 Bacteria 5965
89 Ga0395900_0017184 3300037418 Bacteria 7384
90 Ga0395900_0029118 3300037418 Bacteria 5665
91 Ga0436364_1229363 3300037853 Bacteria 37627
92 Ga0436364_1278791 3300037853 Bacteria 3045
93 Ga0395901_0332412 3300038443 Bacteria 1571
94 Ga0439449_0010387 3300042007 Bacteria 3516
95 Ga0466969_0003706 3300044656 Bacteria 8124
96 Ga0466972_0004790 3300044658 Bacteria 6782
97 Ga0466966_0004793 3300044684 Bacteria 8895
98 Ga0466966_0077948 3300044684 Bacteria 2067
99 Ga0466961_0002348 3300044693 Bacteria 11765
100 Ga0466961_0025633 3300044693 Bacteria 3791
101 Ga0466963_0011563 3300044694 Bacteria 5374
102 Ga0466963_0012356 3300044694 Bacteria 5225
103 Ga0466970_0008751 3300044765 Bacteria 5100
104 Ga0466970_0011611 3300044765 Bacteria 4494
105 Ga0466970_0029873 3300044765 Bacteria 2873
106 Ga0466960_0000357 3300044901 Bacteria 15618
107 Ga0466960_0005770 3300044901 Bacteria 4928
108 Ga0466959_0006597 3300045049 Bacteria 8058
109 Ga0466967_0053121 3300045976 Bacteria 3560
110 Ga0466967_0072730 3300045976 Bacteria 3082
111 Ga0466967_0241353 3300045976 Bacteria 1724
112 Ga0496100_0012353 3300048903 Bacteria 4893
113 Ga0496101_0009176 3300048904 Bacteria 6492
114 Ga0496102_0000018 3300048905 Bacteria 266847
115 Ga0496102_0087774 3300048905 Bacteria 2874
116 Ga0496103_0000115 3300048906 Bacteria 87402
117 Ga0496108_0037715 3300048911 Bacteria 4027
118 Ga0496109_0126043 3300048912 Bacteria 2388
119 Ga0496110_0017838 3300048913 Bacteria 5942
120 Ga0496114_0013322 3300048917 Bacteria 6592
121 Ga0496115_0023936 3300048918 Bacteria 4743
122 Ga0496116_0000235 3300048919 Bacteria 101562
123 Ga0496117_0000236 3300048920 Bacteria 104683
124 Ga0496118_0000100 3300048921 Bacteria 160138
125 Ga0496119_0001940 3300048922 Bacteria 23566
126 Ga0496120_0008553 3300048923 Bacteria 7409
127 Ga0496121_0007268 3300048924 Bacteria 13405
128 Ga0496125_0040947 3300048928 Bacteria 3966
129 Ga0496126_0000327 3300048929 Bacteria 101544
130 Ga0500644_0006655 3300053088 Bacteria 2973
131 Ga0501082_0279968 3300060353 Bacteria 1452
132 Ga0466962_0053333 3300061719 Bacteria 1933

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025321 Ga0207656_10058716 Ga0207656_100587162 337
2 3300014497 Ga0182008_10124901 Ga0182008_101249011 340
3 3300005355 Ga0070671_100000468 Ga0070671_1000004684 347
4 3300005548 Ga0070665_100022495 Ga0070665_1000224954 347
5 3300005578 Ga0068854_100032918 Ga0068854_1000329184 347
6 3300005841 Ga0068863_100035325 Ga0068863_1000353255 347
7 3300005843 Ga0068860_100014517 Ga0068860_1000145178 347
8 3300025931 Ga0207644_10020442 Ga0207644_100204425 347
9 3300025961 Ga0207712_10228502 Ga0207712_102285021 347
10 3300026088 Ga0207641_10024103 Ga0207641_100241032 347
11 3300028379 Ga0268266_10005098 Ga0268266_100050984 347
12 3300028381 Ga0268264_10022989 Ga0268264_100229894 347
13 3300048912 Ga0496109_0126043 Ga0496109_0126043_444_1628 347
14 3300048913 Ga0496110_0017838 Ga0496110_0017838_2401_3585 347
15 3300048917 Ga0496114_0013322 Ga0496114_0013322_2343_3527 347
16 3300048918 Ga0496115_0023936 Ga0496115_0023936_15_1199 347
17 3300005328 Ga0070676_10042179 Ga0070676_100421792 348
18 3300005331 Ga0070670_100101012 Ga0070670_1001010123 348
19 3300005338 Ga0068868_100055556 Ga0068868_1000555563 348
20 3300005347 Ga0070668_100038560 Ga0070668_1000385604 348
21 3300005366 Ga0070659_100094211 Ga0070659_1000942113 348
22 3300005457 Ga0070662_100016972 Ga0070662_1000169723 348
23 3300005614 Ga0068856_100146021 Ga0068856_1001460213 348
24 3300005616 Ga0068852_100054826 Ga0068852_1000548263 348
25 3300005617 Ga0068859_100201210 Ga0068859_1002012101 348
26 3300005618 Ga0068864_100262401 Ga0068864_1002624011 348
27 3300006931 Ga0097620_100201217 Ga0097620_1002012171 348
28 3300013306 Ga0163162_10156763 Ga0163162_101567632 348
29 3300013307 Ga0157372_10146675 Ga0157372_101466753 348
30 3300025907 Ga0207645_10009482 Ga0207645_100094825 348
31 3300025920 Ga0207649_10072620 Ga0207649_100726202 348
32 3300025933 Ga0207706_10059832 Ga0207706_100598324 348
33 3300025936 Ga0207670_10079766 Ga0207670_100797663 348
34 3300025949 Ga0207667_10280315 Ga0207667_102803152 348
35 3300025972 Ga0207668_10018759 Ga0207668_100187593 348
36 3300026075 Ga0207708_10030806 Ga0207708_100308063 348
37 3300026118 Ga0207675_100006067 Ga0207675_1000060679 348
38 3300028379 Ga0268266_10050039 Ga0268266_100500394 348
39 3300028380 Ga0268265_10161753 Ga0268265_101617533 348
40 3300028381 Ga0268264_10069539 Ga0268264_100695392 348
41 3300005539 Ga0068853_100064130 Ga0068853_1000641303 353
42 3300005616 Ga0068852_100116922 Ga0068852_1001169223 354
43 3300026142 Ga0207698_10094580 Ga0207698_100945802 354
44 3300044656 Ga0466969_0003706 Ga0466969_0003706_1419_2615 354
45 3300044684 Ga0466966_0004793 Ga0466966_0004793_3056_4252 354
46 3300044693 Ga0466961_0002348 Ga0466961_0002348_1229_2425 354
47 3300044765 Ga0466970_0008751 Ga0466970_0008751_866_2062 354
48 3300045049 Ga0466959_0006597 Ga0466959_0006597_1294_2490 354
49 3300061719 Ga0466962_0053333 Ga0466962_0053333_327_1523 354
50 iso_pu_bacteria 2857481737 2857485071 356
51 3300031456 Ga0307513_10032149 Ga0307513_100321496 357
52 3300009148 Ga0105243_10272472 Ga0105243_102724722 358
53 3300014326 Ga0157380_10125738 Ga0157380_101257382 358
54 3300025935 Ga0207709_10121584 Ga0207709_101215842 358
55 3300026075 Ga0207708_10020562 Ga0207708_100205624 358
56 3300026118 Ga0207675_100006955 Ga0207675_1000069558 358
57 3300037418 Ga0395900_0017184 Ga0395900_0017184_4246_5457 359
58 3300037418 Ga0395900_0029118 Ga0395900_0029118_1785_2987 359
59 3300038443 Ga0395901_0332412 Ga0395901_0332412_120_1322 359
60 3300044684 Ga0466966_0077948 Ga0466966_0077948_452_1699 359
61 3300044693 Ga0466961_0025633 Ga0466961_0025633_2091_3338 359
62 3300044765 Ga0466970_0011611 Ga0466970_0011611_1001_2248 359
63 3300044901 Ga0466960_0005770 Ga0466960_0005770_2530_3777 359
64 3300048905 Ga0496102_0087774 Ga0496102_0087774_737_1912 359
65 iso_pu_bacteria 2870721527 2870729890 359
66 iso_pu_bacteria 2751185734 2753070305 360
67 iso_pu_bacteria 2866552031 2866553710 360
68 iso_pu_bacteria 2866612099 2866618528 360
69 iso_pu_bacteria 8056207758 8056211168 360
70 3300013308 Ga0157375_10261364 Ga0157375_102613641 361
71 3300044658 Ga0466972_0004790 Ga0466972_0004790_4942_6228 361
72 3300044901 Ga0466960_0000357 Ga0466960_0000357_9248_10534 361
73 iso_pu_bacteria 2558860112 2558911985 361
74 iso_pu_bacteria 2582580736 2583153292 361
75 iso_pu_bacteria 2816332139 2816504238 361
76 iso_pu_bacteria 2870782633 2870789714 361
77 3300005466 Ga0070685_10075925 Ga0070685_100759253 362
78 3300005548 Ga0070665_100104420 Ga0070665_1001044202 362
79 3300005842 Ga0068858_100028241 Ga0068858_1000282413 362
80 3300026116 Ga0207674_10115630 Ga0207674_101156303 362
81 3300045976 Ga0466967_0072730 Ga0466967_0072730_643_1848 362
82 iso_pu_bacteria 2558860280 2559425648 362
83 iso_pu_bacteria 2795385470 2795784362 362
84 iso_pu_bacteria 2899370129 2899372215 362
85 iso_pu_bacteria 8003314358 8003317890 362
86 iso_pu_bacteria 8047710418 8047711761 362
87 iso_pu_bacteria 8054472261 8054478050 362
88 3300009098 Ga0105245_10069080 Ga0105245_100690802 363
89 3300025927 Ga0207687_10149403 Ga0207687_101494032 363
90 3300042007 Ga0439449_0010387 Ga0439449_0010387_25_1233 363
91 iso_pu_bacteria 2585427649 2586062661 363
92 iso_pu_bacteria 2791354901 2791912621 363
93 iso_pu_bacteria 2795385472 2795794148 363
94 iso_pu_bacteria 2808606522 2809588159 363
95 iso_pu_bacteria 2891326441 2891331939 363
96 iso_pu_bacteria 2899359706 2899366948 363
97 iso_pu_bacteria 2915768154 2915773682 363
98 iso_pu_bacteria 2917736166 2917741757 363
99 3300005937 Ga0081455_10000093 Ga0081455_1000009378 364
100 3300025929 Ga0207664_10010001 Ga0207664_100100015 364
101 3300031824 Ga0307413_10000377 Ga0307413_100003776 364
102 3300031852 Ga0307410_10072089 Ga0307410_100720892 364
103 3300045976 Ga0466967_0241353 Ga0466967_0241353_433_1665 364
104 3300053088 Ga0500644_0006655 Ga0500644_0006655_950_2074 364
105 3300060353 Ga0501082_0279968 Ga0501082_0279968_102_1331 364
106 3300030522 Ga0307512_10008970 Ga0307512_100089703 365
107 3300031838 Ga0307518_10012280 Ga0307518_100122807 365
108 3300037853 Ga0436364_1278791 Ga0436364_1278791_1447_2682 365
109 3300044694 Ga0466963_0012356 Ga0466963_0012356_3623_4855 365
110 3300045976 Ga0466967_0053121 Ga0466967_0053121_1982_3214 365
111 3300003320 rootH2_10126301 rootH2_101263011 366
112 3300005345 Ga0070692_10059491 Ga0070692_100594912 366
113 3300005347 Ga0070668_100002705 Ga0070668_10000270511 366
114 3300005435 Ga0070714_100074409 Ga0070714_1000744092 366
115 3300005455 Ga0070663_100014107 Ga0070663_1000141073 366
116 3300005577 Ga0068857_100264779 Ga0068857_1002647792 366
117 3300005841 Ga0068863_100005631 Ga0068863_1000056315 366
118 3300005842 Ga0068858_100017416 Ga0068858_1000174165 366
119 3300009174 Ga0105241_10274939 Ga0105241_102749392 366
120 3300013308 Ga0157375_10060693 Ga0157375_100606934 366
121 3300014968 Ga0157379_10010044 Ga0157379_100100447 366
122 3300014968 Ga0157379_10059716 Ga0157379_100597163 366
123 3300025924 Ga0207694_10058180 Ga0207694_100581803 366
124 3300025929 Ga0207664_10275616 Ga0207664_102756162 366
125 3300025935 Ga0207709_10090314 Ga0207709_100903143 366
126 3300025942 Ga0207689_10062615 Ga0207689_100626152 366
127 3300025972 Ga0207668_10018699 Ga0207668_100186996 366
128 3300026067 Ga0207678_10000340 Ga0207678_1000034013 366
129 3300026088 Ga0207641_10004306 Ga0207641_1000430611 366
130 3300026121 Ga0207683_10109479 Ga0207683_101094793 366
131 3300026121 Ga0207683_10142700 Ga0207683_101427003 366
132 3300028379 Ga0268266_10136762 Ga0268266_101367623 366
133 3300028794 Ga0307515_10048447 Ga0307515_100484475 366
134 3300031616 Ga0307508_10247863 Ga0307508_102478632 366
135 3300044765 Ga0466970_0029873 Ga0466970_0029873_1204_2331 366
136 3300048903 Ga0496100_0012353 Ga0496100_0012353_3593_4804 366
137 3300048904 Ga0496101_0009176 Ga0496101_0009176_3156_4367 366
138 3300048905 Ga0496102_0000018 Ga0496102_0000018_33708_34919 366
139 3300048906 Ga0496103_0000115 Ga0496103_0000115_19685_20896 366
140 3300048911 Ga0496108_0037715 Ga0496108_0037715_2189_3400 366
141 3300048919 Ga0496116_0000235 Ga0496116_0000235_66633_67844 366
142 3300048920 Ga0496117_0000236 Ga0496117_0000236_47968_49179 366
143 3300048921 Ga0496118_0000100 Ga0496118_0000100_92334_93545 366
144 3300048922 Ga0496119_0001940 Ga0496119_0001940_19367_20578 366
145 3300048923 Ga0496120_0008553 Ga0496120_0008553_401_1612 366
146 3300048924 Ga0496121_0007268 Ga0496121_0007268_6136_7347 366
147 3300048928 Ga0496125_0040947 Ga0496125_0040947_148_1359 366
148 3300048929 Ga0496126_0000327 Ga0496126_0000327_66588_67799 366
149 3300021388 Ga0213875_10001548 Ga0213875_1000154815 367
150 3300031838 Ga0307518_10058346 Ga0307518_100583463 367
151 3300033180 Ga0307510_10031694 Ga0307510_100316945 367
152 3300037853 Ga0436364_1229363 Ga0436364_1229363_27202_28425 367
153 3300033179 Ga0307507_10035406 Ga0307507_100354063 368
154 3300044694 Ga0466963_0011563 Ga0466963_0011563_4038_5321 370
155 iso_pu_bacteria 2775506925 2776376396 371
156 iso_pu_bacteria 2863067949 2863071790 371
157 3300003203 JGI25406J46586_10002925 JGI25406J46586_100029257 374
158 3300005985 Ga0081539_10000242 Ga0081539_1000024236 374

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17886

ArsA_HSP20

HSP20-like domain found in ArsA

354

417

0.92

PF02374

ArsA_ATPase

Anion-transporting ATPase

6

327

0.91

PF01656

CbiA

CobQ/CobB/MinD/ParA nucleotide binding domain

8

264

0.79

PF13614

AAA_31

AAA domain

6

152

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3io3-assembly1.cif.gz_A get3 with adp from d. hansenii in closed form 0.8382 7 282
3iqx-assembly1.cif.gz_B adp complex of c.therm. get3 in closed form 0.8358 8 282
3iqx-assembly1.cif.gz_A adp complex of c.therm. get3 in closed form 0.8158 8 282
3sjc-assembly1.cif.gz_A crystal structure of s.cerevisiae get3 in the semi-open state in complex with get1 cytosolic domain 0.8056 4 286
3sjb-assembly1.cif.gz_B crystal structure of s. cerevisiae get3 in the open state in complex with get1 cytosolic domain 0.8036 2 282
ID Description Score Start End Superfamily
1rz3A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8983 5 43 3.40.50.300
af_O53518_307_373_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8849 305 369 2.60.40.790
1ihuA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.852 8 278 3.40.50.300
af_O53518_307_373_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8482 305 369 2.60.40.790
af_A0A1D6HKA8_60_394_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8382 4 282 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6J4JZB7-F1-model_v4 Arsenical pump-driving ATPase TEMP (EC 3.6.3.16) 0.939 9 245 GO:0005524
GO:0016887
AF-A0A2T2T7U7-F1-model_v4 Arsenic-transporting ATPase 0.9007 300 369
AF-A0A7W0Z6X7-F1-model_v4 ArsA family ATPase 0.8963 9 369 GO:0005524
GO:0016887
AF-A0A2E8DZF9-F1-model_v4 Anion-transporting ATPase-like domain-containing protein 0.8944 8 282 GO:0005524
GO:0016887
AF-A0A0M4Q6Q0-F1-model_v4 Arsenic ABC transporter ATPase 0.892 1 298 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
86.75 0.85 High
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Predicted Structure (AlphaFold2)

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