F228498

General Info

Members Datasets Scaffolds Average Seq Length
157 101 314 241

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2739367898|2740166880
Length 259
Sequence ERPEPDTDADGPVRVGVLGARGKVGTEVCRAVEDAADLELVARIDAGDDVEELVRAGARVVVDFTHPDVVMDHLRFCIEHGIHAVVGTTGFDDDRLALLEQWLEASPGTGVLIAPNFSVGAILMMRFAAQAAPFFESVEVVELHHPDKADAPSGTATRTARLIAEARREAGCAPMPDATSSGLEGARGADVDGVRVHGLRVRGLVAHQEVVLGAPGETLTIRHDSLDRVSFTPGVLVGVRKIFTRAGLTVGLESLLDLD

Samples

Sample ID Description Type Environment
1 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
2 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
18 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
19 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
20 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
21 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
31 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
33 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
34 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
35 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
41 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
42 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
43 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
44 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
45 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
46 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
47 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
55 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
56 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
57 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
72 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
73 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
83 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
86 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
87 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
88 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
89 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
93 2739367898 Nocardioides sp. CF479 Isolate Unclassified
94 2643221561 Nocardioides sp. Root151 Isolate Unclassified
95 2643221615 Nocardioides sp. Root224 Isolate Unclassified
96 2643221641 Nocardioides sp. Root122 Isolate Unclassified
97 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
98 2643221696 Nocardioides sp. Root140 Isolate Unclassified
99 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
100 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
101 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 0.64
Isolates 5.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.75
Nodule 0.64
Rhizoplane 1.91
Rhizosphere 71.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070660_100104049 3300005339 Bacteria 2252
2 Ga0070659_100104615 3300005366 Bacteria 2281
3 Ga0070709_10089097 3300005434 Bacteria 2031
4 Ga0070714_100247411 3300005435 Bacteria 1648
5 Ga0070711_100050074 3300005439 Bacteria 2863
6 Ga0070681_10153928 3300005458 Bacteria 2225
7 Ga0070707_100372607 3300005468 Bacteria 1387
8 Ga0070698_100013030 3300005471 Bacteria 8802
9 Ga0068855_100721591 3300005563 Bacteria 1065
10 Ga0068860_100003108 3300005843 Bacteria 17159
11 Ga0075365_10007678 3300006038 Bacteria 6065
12 Ga0075365_10013342 3300006038 Bacteria 4910
13 Ga0075365_10025686 3300006038 Bacteria 3731
14 Ga0075365_10055229 3300006038 Bacteria 2635
15 Ga0075365_10420535 3300006038 Bacteria 943
16 Ga0075368_10000778 3300006042 Bacteria 9802
17 Ga0075363_100002353 3300006048 Bacteria 7690
18 Ga0075363_100033285 3300006048 Bacteria 2683
19 Ga0075364_10028275 3300006051 Bacteria 3588
20 Ga0075362_10149115 3300006177 Bacteria 1121
21 Ga0075367_10002895 3300006178 Bacteria 7991
22 Ga0075367_10083187 3300006178 Bacteria 1938
23 Ga0075370_10049183 3300006353 Bacteria 2390
24 Ga0105249_10396867 3300009553 Bacteria 1409
25 Ga0157375_10603435 3300013308 Bacteria 1257
26 Ga0182008_10044429 3300014497 Bacteria 2209
27 Ga0206353_10380808 3300020082 Bacteria 1310
28 Ga0207699_10075058 3300025906 Bacteria 2079
29 Ga0207707_10554164 3300025912 Bacteria 976
30 Ga0207663_10050539 3300025916 Bacteria 2584
31 Ga0207700_10035592 3300025928 Bacteria 3588
32 Ga0207690_10069856 3300025932 Bacteria 2417
33 Ga0207669_10221786 3300025937 Bacteria 1388
34 Ga0207712_10471488 3300025961 Bacteria 1068
35 Ga0207678_10304441 3300026067 Bacteria 1370
36 Ga0209813_10006561 3300027866 Bacteria 2881
37 Ga0268264_10000305 3300028381 Bacteria 78992
38 Ga0307517_10113292 3300028786 Bacteria 2048
39 Ga0307410_10278329 3300031852 Bacteria 1312
40 Ga0307407_10084553 3300031903 Bacteria 1928
41 Ga0307409_100029286 3300031995 Bacteria 3938
42 Ga0307409_100220216 3300031995 Bacteria 1713
43 Ga0307416_100258292 3300032002 Bacteria 1701
44 Ga0307414_10045219 3300032004 Bacteria 3014
45 Ga0307411_10023401 3300032005 Bacteria 3659
46 Ga0307411_10592029 3300032005 Bacteria 952
47 Ga0307415_100040751 3300032126 Bacteria 3079
48 Ga0316583_10081314 3300032133 Bacteria 1132
49 Ga0395898_0170104 3300037466 Bacteria 2083
50 Ga0395905_0004534 3300037471 Bacteria 14385
51 Ga0395901_0048685 3300038443 Bacteria 4402
52 Ga0395901_0068859 3300038443 Bacteria 3686
53 Ga0451837_0861833 3300041494 Bacteria 1418
54 Ga0439431_0007989 3300041997 Bacteria 2369
55 Ga0439442_006718 3300042002 Bacteria 2311
56 Ga0439434_0019214 3300042435 Bacteria 2048
57 Ga0466972_0020418 3300044658 Bacteria 3310
58 Ga0466972_0040651 3300044658 Bacteria 2265
59 Ga0466972_0334670 3300044658 Bacteria 708
60 Ga0466965_0085369 3300044683 Bacteria 1600
61 Ga0466970_0017822 3300044765 Bacteria 3672
62 Ga0466970_0019994 3300044765 Bacteria 3475
63 Ga0466970_0039690 3300044765 Bacteria 2499
64 Ga0466970_0091094 3300044765 Bacteria 1655
65 Ga0466957_0024892 3300044842 Bacteria 3546
66 Ga0466957_0450529 3300044842 Bacteria 887
67 Ga0466960_0001596 3300044901 Bacteria 8300
68 Ga0466960_0273352 3300044901 Bacteria 945
69 Ga0466967_0035381 3300045976 Bacteria 4251
70 Ga0466967_0126082 3300045976 Bacteria 2372
71 Ga0495599_0107888 3300046678 Bacteria 1735
72 Ga0496104_0566818 3300048907 Bacteria 1046
73 Ga0496114_0083679 3300048917 Bacteria 2700
74 Ga0496114_0420193 3300048917 Bacteria 1184
75 Ga0501031_0003326 3300049568 Bacteria 10320
76 Ga0501031_0413183 3300049568 Bacteria 872
77 Ga0501032_0021039 3300049569 Bacteria 4537
78 Ga0501032_0095820 3300049569 Bacteria 1967
79 Ga0501033_0027527 3300049570 Bacteria 4274
80 Ga0501033_0054027 3300049570 Bacteria 2973
81 Ga0501033_0367882 3300049570 Bacteria 1006
82 Ga0501034_0018366 3300049571 Bacteria 7171
83 Ga0501036_0004245 3300049572 Bacteria 11555
84 Ga0501036_0111785 3300049572 Bacteria 2308
85 Ga0501036_0280397 3300049572 Bacteria 1395
86 Ga0501037_0008882 3300049573 Bacteria 7359
87 Ga0501037_0054863 3300049573 Bacteria 2914
88 Ga0501038_0001411 3300049574 Bacteria 22000
89 Ga0501038_0027061 3300049574 Bacteria 5105
90 Ga0501038_0031357 3300049574 Bacteria 4698
91 Ga0501039_0032393 3300049575 Bacteria 4029
92 Ga0501039_0034535 3300049575 Bacteria 3903
93 Ga0501039_0043356 3300049575 Bacteria 3475
94 Ga0501040_0006078 3300049576 Bacteria 7826
95 Ga0501042_0009797 3300049578 Bacteria 6401
96 Ga0501042_0390478 3300049578 Bacteria 1008
97 Ga0501043_0059128 3300049579 Bacteria 3007
98 Ga0501043_0145175 3300049579 Bacteria 1858
99 Ga0501043_0160760 3300049579 Bacteria 1755
100 Ga0501043_0330201 3300049579 Bacteria 1161
101 Ga0501046_0000841 3300049580 Bacteria 29918
102 Ga0501046_0015973 3300049580 Bacteria 6297
103 Ga0501046_0038244 3300049580 Bacteria 3852
104 Ga0501047_0094439 3300049581 Bacteria 2869
105 Ga0501048_0017189 3300049582 Bacteria 5329
106 Ga0501048_0049464 3300049582 Bacteria 2995
107 Ga0501048_0174725 3300049582 Bacteria 1522
108 Ga0501067_0026271 3300049583 Bacteria 3226
109 Ga0501067_0089629 3300049583 Bacteria 1707
110 Ga0501067_0093367 3300049583 Bacteria 1670
111 Ga0501068_0015955 3300049584 Bacteria 4326
112 Ga0501069_0010205 3300049585 Bacteria 4968
113 Ga0501070_0023708 3300049586 Bacteria 5142
114 Ga0501070_0036724 3300049586 Bacteria 4092
115 Ga0501072_0005730 3300049588 Bacteria 9460
116 Ga0501072_0028146 3300049588 Bacteria 4388
117 Ga0501073_0040728 3300049589 Bacteria 3286
118 Ga0501074_0026566 3300049590 Bacteria 4198
119 Ga0501075_0004295 3300049591 Bacteria 9637
120 Ga0501076_0001391 3300049592 Bacteria 16192
121 Ga0501076_0508764 3300049592 Bacteria 993
122 Ga0501035_0019794 3300049822 Bacteria 6183
123 Ga0501035_0069239 3300049822 Bacteria 3128
124 Ga0501044_0074254 3300049823 Bacteria 3455
125 Ga0501044_0181152 3300049823 Bacteria 2073
126 Ga0501045_0043773 3300049824 Bacteria 3260
127 Ga0501045_0258054 3300049824 Bacteria 1297
128 nmdc:mga03n38_14552_c1 3300050490 Bacteria 3018
129 nmdc:mga03n38_2839_c1 3300050490 Bacteria 5451
130 nmdc:mga00v17_29329_c1 3300050491 Bacteria 3229
131 nmdc:mga00v17_45631_c1 3300050491 Bacteria 2648
132 nmdc:mga00v17_56398_c1 3300050491 Bacteria 2402
133 nmdc:mga00v17_94099_c1 3300050491 Bacteria 1885
134 nmdc:mga00v17_9471_c1 3300050491 Bacteria 5273
135 nmdc:mga0yw44_11495_c1 3300050492 Bacteria 4575
136 nmdc:mga0yw44_139904_c1 3300050492 Bacteria 1572
137 nmdc:mga0yw44_171373_c1 3300050492 Bacteria 1425
138 nmdc:mga0yw44_255899_c1 3300050492 Bacteria 1166
139 nmdc:mga0yw44_3826_c1 3300050492 Bacteria 6760
140 nmdc:mga0yw44_92367_c1 3300050492 Bacteria 1915
141 nmdc:mga06z11_1022_c1 3300050494 Bacteria 10209
142 nmdc:mga07m45_20874_c1 3300050496 Bacteria 3561
143 Ga0500644_0006507 3300053088 Bacteria 2999
144 Ga0500573_0015970 3300053140 Bacteria 4259
145 Ga0501084_0388694 3300054114 Bacteria 1179
146 Ga0466962_0035240 3300061719 Bacteria 2396
147 Ga0466962_0325879 3300061719 Bacteria 762
148 Ga0530510_0036127 3300061734 Bacteria 3561
149 2740166880 2739367898 Bacteria 4367674
150 2643825456 2643221561 Bacteria 4984412
151 2644089717 2643221615 Bacteria 5487866
152 2644229025 2643221641 Bacteria 4490190
153 2644319562 2643221657 Bacteria 5490246
154 2644531452 2643221696 Bacteria 5431823
155 2855387698 2855386786 Bacteria 4752232
156 2857483043 2857481737 Bacteria 4761446
157 8054612611 8054609563 Bacteria 5170090
158 Ga0070660_100104049
159 Ga0070659_100104615
160 Ga0070709_10089097
161 Ga0070714_100247411
162 Ga0070711_100050074
163 Ga0070681_10153928
164 Ga0070707_100372607
165 Ga0070698_100013030
166 Ga0068855_100721591
167 Ga0068860_100003108
168 Ga0075365_10007678
169 Ga0075365_10013342
170 Ga0075365_10025686
171 Ga0075365_10055229
172 Ga0075365_10420535
173 Ga0075368_10000778
174 Ga0075363_100002353
175 Ga0075363_100033285
176 Ga0075364_10028275
177 Ga0075362_10149115
178 Ga0075367_10002895
179 Ga0075367_10083187
180 Ga0075370_10049183
181 Ga0105249_10396867
182 Ga0157375_10603435
183 Ga0182008_10044429
184 Ga0206353_10380808
185 Ga0207699_10075058
186 Ga0207707_10554164
187 Ga0207663_10050539
188 Ga0207700_10035592
189 Ga0207690_10069856
190 Ga0207669_10221786
191 Ga0207712_10471488
192 Ga0207678_10304441
193 Ga0209813_10006561
194 Ga0268264_10000305
195 Ga0307517_10113292
196 Ga0307410_10278329
197 Ga0307407_10084553
198 Ga0307409_100029286
199 Ga0307409_100220216
200 Ga0307416_100258292
201 Ga0307414_10045219
202 Ga0307411_10023401
203 Ga0307411_10592029
204 Ga0307415_100040751
205 Ga0316583_10081314
206 Ga0395898_0170104
207 Ga0395905_0004534
208 Ga0395901_0048685
209 Ga0395901_0068859
210 Ga0451837_0861833
211 Ga0439431_0007989
212 Ga0439442_006718
213 Ga0439434_0019214
214 Ga0466972_0020418
215 Ga0466972_0040651
216 Ga0466972_0334670
217 Ga0466965_0085369
218 Ga0466970_0017822
219 Ga0466970_0019994
220 Ga0466970_0039690
221 Ga0466970_0091094
222 Ga0466957_0024892
223 Ga0466957_0450529
224 Ga0466960_0001596
225 Ga0466960_0273352
226 Ga0466967_0035381
227 Ga0466967_0126082
228 Ga0495599_0107888
229 Ga0496104_0566818
230 Ga0496114_0083679
231 Ga0496114_0420193
232 Ga0501031_0003326
233 Ga0501031_0413183
234 Ga0501032_0021039
235 Ga0501032_0095820
236 Ga0501033_0027527
237 Ga0501033_0054027
238 Ga0501033_0367882
239 Ga0501034_0018366
240 Ga0501036_0004245
241 Ga0501036_0111785
242 Ga0501036_0280397
243 Ga0501037_0008882
244 Ga0501037_0054863
245 Ga0501038_0001411
246 Ga0501038_0027061
247 Ga0501038_0031357
248 Ga0501039_0032393
249 Ga0501039_0034535
250 Ga0501039_0043356
251 Ga0501040_0006078
252 Ga0501042_0009797
253 Ga0501042_0390478
254 Ga0501043_0059128
255 Ga0501043_0145175
256 Ga0501043_0160760
257 Ga0501043_0330201
258 Ga0501046_0000841
259 Ga0501046_0015973
260 Ga0501046_0038244
261 Ga0501047_0094439
262 Ga0501048_0017189
263 Ga0501048_0049464
264 Ga0501048_0174725
265 Ga0501067_0026271
266 Ga0501067_0089629
267 Ga0501067_0093367
268 Ga0501068_0015955
269 Ga0501069_0010205
270 Ga0501070_0023708
271 Ga0501070_0036724
272 Ga0501072_0005730
273 Ga0501072_0028146
274 Ga0501073_0040728
275 Ga0501074_0026566
276 Ga0501075_0004295
277 Ga0501076_0001391
278 Ga0501076_0508764
279 Ga0501035_0019794
280 Ga0501035_0069239
281 Ga0501044_0074254
282 Ga0501044_0181152
283 Ga0501045_0043773
284 Ga0501045_0258054
285 nmdc:mga03n38_14552_c1
286 nmdc:mga03n38_2839_c1
287 nmdc:mga00v17_29329_c1
288 nmdc:mga00v17_45631_c1
289 nmdc:mga00v17_56398_c1
290 nmdc:mga00v17_94099_c1
291 nmdc:mga00v17_9471_c1
292 nmdc:mga0yw44_11495_c1
293 nmdc:mga0yw44_139904_c1
294 nmdc:mga0yw44_171373_c1
295 nmdc:mga0yw44_255899_c1
296 nmdc:mga0yw44_3826_c1
297 nmdc:mga0yw44_92367_c1
298 nmdc:mga06z11_1022_c1
299 nmdc:mga07m45_20874_c1
300 Ga0500644_0006507
301 Ga0500573_0015970
302 Ga0501084_0388694
303 Ga0466962_0035240
304 Ga0466962_0325879
305 Ga0530510_0036127
306 2740166880
307 2643825456
308 2644089717
309 2644229025
310 2644319562
311 2644531452
312 2855387698
313 2857483043
314 8054612611

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01113

DapB_N

Dihydrodipicolinate reductase, N-terminus

13

117

0.94

PF05173

DapB_C

Dihydrodipicolinate reductase, C-terminus

120

256

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1c3v-assembly1.cif.gz_A dihydrodipicolinate reductase from mycobacterium tuberculosis complexed with nadph and pdc 0.9024 3 236
1c3v-assembly1.cif.gz_A dihydrodipicolinate reductase from mycobacterium tuberculosis complexed with nadph and pdc 0.8915 3 236
2csu-assembly1.cif.gz_A crystal structure of ph0766 from pyrococcus horikoshii ot3 0.8259 4 88
1yl5-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis dihydrodipicolinate reductase (rv2773c) (crystal form a) 0.8188 1 236
1yl5-assembly1.cif.gz_A crystal structure of mycobacterium tuberculosis dihydrodipicolinate reductase (rv2773c) (crystal form a) 0.8158 1 236
ID Description Score Start End Superfamily
af_P9WP23_2_120_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9288 5 109 3.50.50.60
1c3vA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9153 95 203 3.30.360.10
1c3vA02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9073 95 203 3.30.360.10
af_P9WP23_2_88_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.896 5 76 3.40.50.720
af_P9WQH3_6_126_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8903 5 62 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2T0TA40-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9312 2 235 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-A0A3E1HG30-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9258 3 236 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287
AF-A0A6G3VU93-F1-model_v4 deleted 0.9251 40 235
AF-A0A6G3VU93-F1-model_v4 deleted 0.9206 40 235
AF-A0A2T0TA40-F1-model_v4 4-hydroxy-tetrahydrodipicolinate reductase (HTPA reductase) (EC 1.17.1.8) 0.9198 2 235 GO:0005829
GO:0008839
GO:0009089
GO:0016726
GO:0019877
GO:0050661
GO:0051287

Map