F228255

General Info

Members Datasets Scaffolds Average Seq Length
157 94 280 546

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0002055|Ga0501032_0002055_13272_14969
Length 565
Sequence VRRKKLVAVNDPITLEIIQNSLQATADEMFAVMKKTAMSSIIYEVLDMGTGITDANGALASSGAGIPAFIGVLDKAVKVMVKKFGAAGGIEPGDVFVTNDPYYGGVTHLNDIVVAMPVFSGGKIIAWTANIAHNSDVGGMAPGSLTGEATEIYQEGLRLPAVKLIAKGEPIRPVFDIIKVNSRMPDVLEGDVWAAIASVRIGARRLAELAEKYGTATFENAMASFMDFGEEVSLKELANLPKGTFELSEEQDDGRIFNVRITIDDDAFTVDLRNNPDQSASPVNTSRDGVMVAAQMIFKSLTDPYSPANEGSFRPIRLLTREGSVFHAKEPAPIGFYYEIELRVYDIMWRCLAAHMPERLAAGHFASVCGTFIGGIHPDTGRQYTIIEPQLGGWGASRGRDGNSAVFCGFHGETYNCPAEINEARNGLIVDRMELNVEPGGEGRHAGGHGIVMDYRVRADNGFLTAGYTRSKFPAWPLDGGREGSPNYVEVIRKDGSRERFAFVSGLTTHTDDVIRVVTGNGGGLGDPKERDRAAVAEDIRNGLIAPERAADVYGFRSGGKEQIS

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
6 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
7 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
8 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
9 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
10 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
11 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
12 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
13 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
17 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
18 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
19 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
20 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
21 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
22 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
23 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
24 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
25 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
26 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
27 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
28 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
29 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
30 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
31 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
32 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
33 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
34 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
35 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
36 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
37 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
38 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
39 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
40 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
41 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
42 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
43 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
44 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
45 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
46 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
47 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
48 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
49 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
50 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
51 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
52 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
58 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
59 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
60 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
61 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
62 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
63 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
64 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
65 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
67 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
68 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
69 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
70 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
71 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
72 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
73 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
74 2643221599 Rhizobium sp. Root708 Isolate Unclassified
75 2643221629 Devosia sp. Root105 Isolate Unclassified
76 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
77 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
78 2643221662 Devosia sp. Root413D1 Isolate Unclassified
79 2643221718 Rhizobium sp. Root268 Isolate Unclassified
80 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
81 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
82 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
83 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
84 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
85 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
86 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
87 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
88 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
89 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
90 2945928738 Pseudomonas cedrina W1I11 Isolate Rhizosphere
91 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
92 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
93 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
94 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 84.71
Metatranscriptomes 0
Isolates 15.29

Biome Distribution

Category Percentage (%)
Aerial Root 0.64
Bulb 0
Endosphere 6.37
Nodule 0.64
Rhizoplane 0
Rhizosphere 68.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0002055 3300049569 Bacteria 15899
2 JGI25165J46597_1001753 3300003214 Bacteria 9468
3 Ga0070683_100087530 3300005329 Bacteria 2922
4 Ga0081455_10007346 3300005937 Bacteria 11618
5 Ga0075364_10038540 3300006051 Bacteria 3096
6 Ga0075435_100031147 3300007076 Bacteria 4200
7 Ga0105240_10225911 3300009093 Bacteria 2178
8 Ga0105237_10000647 3300009545 Bacteria 48519
9 Ga0105239_10000238 3300010375 Bacteria 81412
10 Ga0157370_10052552 3300013104 Bacteria 3890
11 Ga0207427_102378 3300025231 Bacteria 5126
12 Ga0209233_1000425 3300025261 Bacteria 31099
13 Ga0207671_10000098 3300025914 Bacteria 133010
14 Ga0207646_10123264 3300025922 Bacteria 2330
15 Ga0268266_10000331 3300028379 Bacteria 74549
16 Ga0307515_10000145 3300028794 Bacteria 170814
17 Ga0316579_10009751 3300031691 Bacteria 4043
18 Ga0373943_0009407 3300035170 Bacteria 4380
19 Ga0373947_0007162 3300035725 Bacteria 6466
20 Ga0373925_0030762 3300037068 Bacteria 3941
21 Ga0395899_0079581 3300037312 Bacteria 2387
22 Ga0395900_0061258 3300037418 Bacteria 3869
23 Ga0395900_0128195 3300037418 Bacteria 2601
24 Ga0395898_0060022 3300037466 Bacteria 3697
25 Ga0395898_0061027 3300037466 Bacteria 3663
26 Ga0395905_0001586 3300037471 Bacteria 27080
27 Ga0395905_0008020 3300037471 Bacteria 10432
28 Ga0395905_0083230 3300037471 Bacteria 2998
29 Ga0395901_0032552 3300038443 Bacteria 5379
30 Ga0400483_036110 3300039062 Bacteria 2578
31 Ga0400483_116438 3300039062 Bacteria 6068
32 Ga0400483_285271 3300039062 Bacteria 5496
33 Ga0436365_1931585 3300039437 Bacteria 1930
34 Ga0436361_0318534 3300039447 Bacteria 2650
35 Ga0436361_0740928 3300039447 Bacteria 9488
36 Ga0436363_0053014 3300039450 Bacteria 3214
37 Ga0466963_0074618 3300044694 Bacteria 2288
38 Ga0466967_0002828 3300045976 Bacteria 11010
39 Ga0466967_0006427 3300045976 Bacteria 8313
40 Ga0466967_0078067 3300045976 Bacteria 2982
41 Ga0495627_000285 3300046453 Bacteria 51019
42 Ga0495638_0007925 3300046460 Bacteria 7577
43 Ga0495638_0017734 3300046460 Bacteria 4740
44 Ga0495585_0002854 3300046492 Bacteria 12028
45 Ga0495606_0000724 3300046507 Bacteria 51037
46 Ga0495606_0000883 3300046507 Bacteria 44862
47 Ga0495654_0001813 3300046530 Bacteria 14233
48 Ga0495654_0002081 3300046530 Bacteria 13121
49 Ga0495586_0003218 3300046535 Bacteria 8775
50 Ga0495613_0050991 3300046689 Bacteria 3051
51 Ga0495674_0115394 3300047319 Bacteria 2273
52 Ga0495679_000363 3300047446 Bacteria 35328
53 Ga0495679_000457 3300047446 Bacteria 30025
54 Ga0496116_0023906 3300048919 Bacteria 4536
55 Ga0496117_0000363 3300048920 Bacteria 78883
56 Ga0496117_0041227 3300048920 Bacteria 3385
57 Ga0496119_0002803 3300048922 Bacteria 18687
58 Ga0496120_0000939 3300048923 Bacteria 40080
59 Ga0496121_0000005 3300048924 Bacteria 1034486
60 Ga0496121_0079124 3300048924 Bacteria 2611
61 Ga0496122_0001984 3300048925 Bacteria 30545
62 Ga0496122_0019651 3300048925 Bacteria 6158
63 Ga0496123_0001336 3300048926 Bacteria 34846
64 Ga0496123_0007134 3300048926 Bacteria 10615
65 Ga0496123_0045937 3300048926 Bacteria 2967
66 Ga0496124_0030701 3300048927 Bacteria 4765
67 Ga0496125_0000034 3300048928 Bacteria 348231
68 Ga0496125_0000541 3300048928 Bacteria 65102
69 Ga0496125_0001580 3300048928 Bacteria 32411
70 Ga0496125_0080739 3300048928 Bacteria 2487
71 Ga0496126_0003346 3300048929 Bacteria 20361
72 Ga0496126_0066337 3300048929 Bacteria 3227
73 Ga0496126_0181103 3300048929 Bacteria 1790
74 Ga0501033_0000377 3300049570 Bacteria 42799
75 Ga0501034_0000160 3300049571 Bacteria 126787
76 Ga0501034_0049550 3300049571 Bacteria 4238
77 Ga0501037_0000198 3300049573 Bacteria 54028
78 Ga0501038_0157720 3300049574 Bacteria 1846
79 Ga0501043_0000100 3300049579 Bacteria 79167
80 Ga0501043_0092188 3300049579 Bacteria 2382
81 Ga0501047_0008602 3300049581 Bacteria 9638
82 Ga0501047_0027985 3300049581 Bacteria 5432
83 Ga0501068_0008194 3300049584 Bacteria 5809
84 Ga0501068_0058315 3300049584 Bacteria 2342
85 Ga0501069_0000020 3300049585 Bacteria 122595
86 Ga0501069_0001482 3300049585 Bacteria 11571
87 Ga0501070_0000174 3300049586 Bacteria 59663
88 Ga0501070_0000278 3300049586 Bacteria 48167
89 Ga0501070_0000615 3300049586 Bacteria 32680
90 Ga0501070_0004464 3300049586 Bacteria 12015
91 Ga0501070_0108514 3300049586 Bacteria 2293
92 Ga0501071_0001199 3300049587 Bacteria 14639
93 Ga0501073_0033363 3300049589 Bacteria 3666
94 Ga0501073_0037910 3300049589 Bacteria 3421
95 Ga0501074_0000015 3300049590 Bacteria 79939
96 Ga0501074_0016387 3300049590 Bacteria 5382
97 Ga0501080_0000219 3300049742 Bacteria 42649
98 Ga0501080_0011472 3300049742 Bacteria 8113
99 Ga0501080_0021395 3300049742 Bacteria 5987
100 Ga0501083_0000317 3300049744 Bacteria 30564
101 Ga0501083_0082232 3300049744 Bacteria 2134
102 Ga0501035_0000070 3300049822 Bacteria 127442
103 Ga0501035_0001271 3300049822 Bacteria 26068
104 Ga0501035_0001891 3300049822 Bacteria 21065
105 Ga0501035_0049772 3300049822 Bacteria 3755
106 Ga0501044_0000037 3300049823 Bacteria 161924
107 Ga0501044_0007832 3300049823 Bacteria 11744
108 Ga0501044_0010917 3300049823 Bacteria 9858
109 Ga0501044_0070317 3300049823 Bacteria 3560
110 nmdc:mga00v17_3166_c1 3300050491 Bacteria 8480
111 nmdc:mga0rr50_115041_c1 3300050513 Bacteria 2134
112 Ga0500644_0005475 3300053088 Bacteria 3207
113 Ga0500559_0010537 3300053136 Bacteria 3966
114 Ga0500559_0036220 3300053136 Bacteria 2133
115 Ga0500568_0000195 3300053139 Bacteria 52955
116 Ga0500622_0001661 3300053156 Bacteria 17388
117 2585168678 2582581283 Bacteria 6030556
118 2644003393 2643221599 Bacteria 6292121
119 2644167768 2643221629 Bacteria 5850260
120 2644193884 2643221634 Bacteria 6705461
121 2644210865 2643221637 Bacteria 5345260
122 2644349227 2643221662 Bacteria 5851492
123 2644654399 2643221718 Bacteria 5345506
124 2739347646 2738543031 Bacteria 5769731
125 2739347649 2738543031 Bacteria 5769731
126 2745082343 2744054633 Bacteria 8678936
127 2793283618 2791355253 Bacteria 5171699
128 2860870721 2860867994 Bacteria 5645326
129 2889791126 2889790730 Bacteria 5689708
130 2889791129 2889790730 Bacteria 5689708
131 2891048951 2891048133 Bacteria 4447501
132 2903755101 2903748898 Bacteria 9972761
133 2929142608 2929138655 Bacteria 5810547
134 2937847036 2937843397 Bacteria 5256375
135 2939670548 2939669807 Bacteria 5028511
136 2945933345 2945928738 Bacteria 6053221
137 2945964500 2945961074 Bacteria 7342064
138 2958070865 2958064165 Bacteria 7158582
139 2978971009 2978969890 Bacteria 5400756
140 2984588115 2984587000 Bacteria 5263363
141 Ga0501032_0002055
142 JGI25165J46597_1001753
143 Ga0070683_100087530
144 Ga0081455_10007346
145 Ga0075364_10038540
146 Ga0075435_100031147
147 Ga0105240_10225911
148 Ga0105237_10000647
149 Ga0105239_10000238
150 Ga0157370_10052552
151 Ga0207427_102378
152 Ga0209233_1000425
153 Ga0207671_10000098
154 Ga0207646_10123264
155 Ga0268266_10000331
156 Ga0307515_10000145
157 Ga0316579_10009751
158 Ga0373943_0009407
159 Ga0373947_0007162
160 Ga0373925_0030762
161 Ga0395899_0079581
162 Ga0395900_0061258
163 Ga0395900_0128195
164 Ga0395898_0060022
165 Ga0395898_0061027
166 Ga0395905_0001586
167 Ga0395905_0008020
168 Ga0395905_0083230
169 Ga0395901_0032552
170 Ga0400483_036110
171 Ga0400483_116438
172 Ga0400483_285271
173 Ga0436365_1931585
174 Ga0436361_0318534
175 Ga0436361_0740928
176 Ga0436363_0053014
177 Ga0466963_0074618
178 Ga0466967_0002828
179 Ga0466967_0006427
180 Ga0466967_0078067
181 Ga0495627_000285
182 Ga0495638_0007925
183 Ga0495638_0017734
184 Ga0495585_0002854
185 Ga0495606_0000724
186 Ga0495606_0000883
187 Ga0495654_0001813
188 Ga0495654_0002081
189 Ga0495586_0003218
190 Ga0495613_0050991
191 Ga0495674_0115394
192 Ga0495679_000363
193 Ga0495679_000457
194 Ga0496116_0023906
195 Ga0496117_0000363
196 Ga0496117_0041227
197 Ga0496119_0002803
198 Ga0496120_0000939
199 Ga0496121_0000005
200 Ga0496121_0079124
201 Ga0496122_0001984
202 Ga0496122_0019651
203 Ga0496123_0001336
204 Ga0496123_0007134
205 Ga0496123_0045937
206 Ga0496124_0030701
207 Ga0496125_0000034
208 Ga0496125_0000541
209 Ga0496125_0001580
210 Ga0496125_0080739
211 Ga0496126_0003346
212 Ga0496126_0066337
213 Ga0496126_0181103
214 Ga0501033_0000377
215 Ga0501034_0000160
216 Ga0501034_0049550
217 Ga0501037_0000198
218 Ga0501038_0157720
219 Ga0501043_0000100
220 Ga0501043_0092188
221 Ga0501047_0008602
222 Ga0501047_0027985
223 Ga0501068_0008194
224 Ga0501068_0058315
225 Ga0501069_0000020
226 Ga0501069_0001482
227 Ga0501070_0000174
228 Ga0501070_0000278
229 Ga0501070_0000615
230 Ga0501070_0004464
231 Ga0501070_0108514
232 Ga0501071_0001199
233 Ga0501073_0033363
234 Ga0501073_0037910
235 Ga0501074_0000015
236 Ga0501074_0016387
237 Ga0501080_0000219
238 Ga0501080_0011472
239 Ga0501080_0021395
240 Ga0501083_0000317
241 Ga0501083_0082232
242 Ga0501035_0000070
243 Ga0501035_0001271
244 Ga0501035_0001891
245 Ga0501035_0049772
246 Ga0501044_0000037
247 Ga0501044_0007832
248 Ga0501044_0010917
249 Ga0501044_0070317
250 nmdc:mga00v17_3166_c1
251 nmdc:mga0rr50_115041_c1
252 Ga0500644_0005475
253 Ga0500559_0010537
254 Ga0500559_0036220
255 Ga0500568_0000195
256 Ga0500622_0001661
257 2585168678
258 2644003393
259 2644167768
260 2644193884
261 2644210865
262 2644349227
263 2644654399
264 2739347646
265 2739347649
266 2745082343
267 2793283618
268 2860870721
269 2889791126
270 2889791129
271 2891048951
272 2903755101
273 2929142608
274 2937847036
275 2939670548
276 2945933345
277 2945964500
278 2958070865
279 2978971009
280 2984588115

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02538

Hydantoinase_B

Hydantoinase B/oxoprolinase

11

528

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l9w-assembly1.cif.gz_A crystal structure of the apc core complex 0.9064 2 539
6yra-assembly2.cif.gz_D crystal structure of atp-dependent caprolactamase from pseudomonas jessenii 0.9021 1 539
5l9w-assembly1.cif.gz_A crystal structure of the apc core complex 0.9016 2 539
6yra-assembly2.cif.gz_D crystal structure of atp-dependent caprolactamase from pseudomonas jessenii 0.8989 1 539
5m45-assembly2.cif.gz_J structure of acetone carboxylase purified from xanthobacter autotrophicus 0.8988 4 539
ID Description Score Start End Superfamily
af_Q07951_1_179_3.30.230.90 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.7659 235 265 3.30.230.90
af_P9WH15_79_363_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7591 236 262 3.20.20.70
2z5bB01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.7578 235 265 3.30.230.90
6fz6B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7546 236 262 3.20.20.70
af_Q92361_1_108_2.170.210.10 Mainly Beta;Beta Complex;Dna Repair Protein Xrcc4; Chain: A, domain 1;DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.7355 235 262 2.170.210.10
ID Description Score Start End GO Terms
AF-A0A6N9B608-F1-model_v4 Hydantoinase B/oxoprolinase family protein 0.9808 176 540 GO:0005829
GO:0006749
GO:0017168
AF-K6YLZ8-F1-model_v4 N-methylhydantoinase B (EC 3.5.2.14) 0.9798 2 539 GO:0005829
GO:0006749
GO:0017168
GO:0047423
AF-K6YLZ8-F1-model_v4 N-methylhydantoinase B (EC 3.5.2.14) 0.9745 2 539 GO:0005829
GO:0006749
GO:0017168
GO:0047423
AF-A0A535ILN6-F1-model_v4 Hydantoinase B/oxoprolinase family protein 0.9714 2 342 GO:0005829
GO:0006749
GO:0017168
AF-A0A2E7TCI1-F1-model_v4 Methylhydantoinase 0.9686 2 532 GO:0005829
GO:0006749
GO:0017168

Map