F228206

General Info

Members Datasets Scaffolds Average Seq Length
157 123 149 722

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0004006|Ga0496119_0004006_4379_6769
Length 782
Sequence MTICYGRGRKAALPLLALLLLAATQAHAEDGYELWLRYHPIPDDALRAHYKQAASEIVAAVPGQGDAPVVSVGTAAAPRISSSGLESGATRHSSAIPTSTASPMLDSTAVADAKLGPAHASQTTDAPSPLAAAQAELVRGLSGLLATTVHISDKPNQDGSVVIGTPKSSPMIAKLNLPLAKAGAEGYLIHSISYEGHHVTVIAANSDAGVLYGAFHFLRLIQTQQPIDTLDIAAAPRIQLRLLNHWDNLDRTVERGYAGQSIWDWQKLPDYLDPRYTDYARACASLGINGTVPTNVNASPIGLTEPYLRKYAALARVFRPYGLRVYLTARFSAPIEIGGLKTADPLDPAVKAWWRAKADEIYTLIPDFGGFVVKANSEGQPGPQDYHRTHADGANMLADVLAPHGGIVMWRAFVYSQDQPQDRAKQAYSEFVPLDGKFRDNVVLQVKNGAIDFQPREPFHPLFGATPHTPLMLEVQITKEYLGFATHLVYLGSLFEETLRSDTYARGKGSTVARIIDGSLFGHHTTGMAGVANIGSDRNWSGSIFDQANWYVFGRLAWDPMLSSRDIANEWVKMTFTNEPAFVGPVVDMMMGSREAAVNYMTPLGLHHQMARTSHYGPGPWVTGGPRADWTSTYFNRADAQGIGFDRTATGSDAVSQYAAPVAAEFSDLKRVPDEYLLWFHHVELVMHYSAGVRAVADMQKTWAGLSDYVDPQRFEQISAFLGIQAKEAKWWRDASLAYFETFSKRPLPDHEAPPEHDLKYYESLCFPYAPGGAPRPKATCE

Samples

Sample ID Description Type Environment
1 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
2 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
3 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
4 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
5 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
6 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
7 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
8 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
9 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
10 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
38 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
70 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
71 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
77 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
81 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
82 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
83 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
84 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
87 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
90 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
91 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
92 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
93 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
94 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
97 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
98 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
101 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
102 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
103 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
104 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
107 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
108 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
109 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
112 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
113 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
114 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
115 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
119 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
120 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.9
Metatranscriptomes 0
Isolates 5.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.92
Nodule 0
Rhizoplane 0.64
Rhizosphere 70.7
Stem 0
Stem Tuber 0
Unclassified 12.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000036 3300002773 Bacteria 93679
2 JGI25150J39212_1000156 3300002774 Bacteria 38549
3 JGI25151J46595_10000133 3300003187 Bacteria 99030
4 JGI25153J46596_10000058 3300003215 Bacteria 132614
5 rootH1_10013304 3300003316 Bacteria 4699
6 Ga0055525_1000004 3300003759 Bacteria 888039
7 Ga0055526_1000029 3300003771 Bacteria 148855
8 Ga0055531_10000001 3300003794 Bacteria 543586
9 Ga0070682_100008476 3300005337 Bacteria 5802
10 Ga0070667_100010091 3300005367 Bacteria 7816
11 Ga0070663_100001887 3300005455 Bacteria 11700
12 Ga0070681_10054274 3300005458 Bacteria 3993
13 Ga0068867_100025570 3300005459 Bacteria 4237
14 Ga0070679_100022765 3300005530 Bacteria 6128
15 Ga0070684_100082385 3300005535 Bacteria 2849
16 Ga0070665_100018903 3300005548 Bacteria 6911
17 Ga0070665_100036444 3300005548 Bacteria 4947
18 Ga0070665_100062181 3300005548 Bacteria 3744
19 Ga0068855_100002914 3300005563 Bacteria 20938
20 Ga0068859_100020705 3300005617 Bacteria 6600
21 Ga0068861_100006330 3300005719 Bacteria 8058
22 Ga0097620_100020705 3300006931 Bacteria 6600
23 Ga0105240_10000871 3300009093 Bacteria 54379
24 Ga0105240_10023307 3300009093 Bacteria 8191
25 Ga0105240_10087343 3300009093 Bacteria 3819
26 Ga0105247_10000522 3300009101 Bacteria 31487
27 Ga0105237_10044097 3300009545 Bacteria 4491
28 Ga0105249_10021768 3300009553 Bacteria 5741
29 Ga0157375_10035409 3300013308 Bacteria 4765
30 Ga0163163_10028188 3300014325 Bacteria 5389
31 Ga0157379_10018906 3300014968 Bacteria 6080
32 Ga0209563_100013 3300025230 Bacteria 941463
33 Ga0207425_1000011 3300025245 Bacteria 550735
34 Ga0209129_1000031 3300025258 Bacteria 383039
35 Ga0209025_1000012 3300025294 Bacteria 924362
36 Ga0209564_1000009 3300025295 Bacteria 950196
37 Ga0209758_1000143 3300025297 Bacteria 171093
38 Ga0209050_1002304 3300025298 Bacteria 16824
39 Ga0209257_1000033 3300025304 Bacteria 671006
40 Ga0207710_10000196 3300025900 Bacteria 57024
41 Ga0207695_10019355 3300025913 Bacteria 7839
42 Ga0207695_10105585 3300025913 Bacteria 2804
43 Ga0207652_10031064 3300025921 Bacteria 4482
44 Ga0207711_10045215 3300025941 Bacteria 3763
45 Ga0207689_10028140 3300025942 Bacteria 4701
46 Ga0207667_10004623 3300025949 Bacteria 16891
47 Ga0207703_10000240 3300026035 Bacteria 62235
48 Ga0207703_10001782 3300026035 Bacteria 19221
49 Ga0207678_10008505 3300026067 Bacteria 9048
50 Ga0207708_10025842 3300026075 Bacteria 4444
51 Ga0207641_10000247 3300026088 Bacteria 69132
52 Ga0207648_10038246 3300026089 Bacteria 4223
53 Ga0207675_100000912 3300026118 Bacteria 29484
54 Ga0207675_100023037 3300026118 Bacteria 5792
55 Ga0268266_10000783 3300028379 Bacteria 42459
56 Ga0268266_10029028 3300028379 Bacteria 4701
57 Ga0268264_10000057 3300028381 Bacteria 309824
58 Ga0268264_10000165 3300028381 Bacteria 147648
59 Ga0268264_10008546 3300028381 Bacteria 8511
60 Ga0307515_10002927 3300028794 Bacteria 36215
61 Ga0307511_10001702 3300030521 Bacteria 23150
62 Ga0265330_10003731 3300031235 Bacteria 7879
63 Ga0265340_10001251 3300031247 Bacteria 14590
64 Ga0265340_10001784 3300031247 Bacteria 12280
65 Ga0265340_10010282 3300031247 Bacteria 5009
66 Ga0265316_10006514 3300031344 Bacteria 11138
67 Ga0265313_10011732 3300031595 Bacteria 5425
68 Ga0307516_10069558 3300031730 Bacteria 3385
69 Ga0307414_10000124 3300032004 Bacteria 53995
70 Ga0307414_10000278 3300032004 Bacteria 30536
71 Ga0307510_10000014 3300033180 Bacteria 271607
72 Ga0307510_10004406 3300033180 Bacteria 16565
73 Ga0373936_0001148 3300035113 Bacteria 9499
74 Ga0373927_0031514 3300035695 Bacteria 3455
75 Ga0237819_00091 3300038705 Bacteria 32900
76 Ga0451793_1714212 3300041452 Bacteria 3335
77 Ga0439449_0000151 3300042007 Bacteria 23575
78 Ga0466966_0031244 3300044684 Bacteria 3454
79 Ga0453684_0003558 3300044712 Bacteria 34854
80 Ga0451576_0001256 3300045051 Bacteria 44550
81 Ga0466967_0201513 3300045976 Bacteria 1885
82 Ga0495617_000670 3300046452 Bacteria 17120
83 Ga0495627_002351 3300046453 Bacteria 9235
84 Ga0495638_0000633 3300046460 Bacteria 38772
85 Ga0495638_0002562 3300046460 Bacteria 14722
86 Ga0495580_0030568 3300046472 Bacteria 3899
87 Ga0495605_0000068 3300046474 Bacteria 137743
88 Ga0495605_0001469 3300046474 Bacteria 15394
89 Ga0495584_0000207 3300046491 Bacteria 42357
90 Ga0495585_0015012 3300046492 Bacteria 4503
91 Ga0495585_0045783 3300046492 Bacteria 2441
92 Ga0495607_0007261 3300046501 Bacteria 7690
93 Ga0495607_0018589 3300046501 Bacteria 4428
94 Ga0495607_0020848 3300046501 Bacteria 4132
95 Ga0495583_0000330 3300046506 Bacteria 74846
96 Ga0495606_0042903 3300046507 Bacteria 3022
97 Ga0495610_0000117 3300046512 Bacteria 90466
98 Ga0495616_0000602 3300046513 Bacteria 27144
99 Ga0495643_0000093 3300046522 Bacteria 152412
100 Ga0495644_0001959 3300046523 Bacteria 8268
101 Ga0495644_0004019 3300046523 Bacteria 5784
102 Ga0495648_0000334 3300046524 Bacteria 51958
103 Ga0495648_0000599 3300046524 Bacteria 38548
104 Ga0495609_0001493 3300046538 Bacteria 15482
105 Ga0495609_0012060 3300046538 Bacteria 4103
106 Ga0495633_0000928 3300046558 Bacteria 24792
107 Ga0495633_0015573 3300046558 Bacteria 3941
108 Ga0495656_0005308 3300046615 Bacteria 4439
109 Ga0495611_0001917 3300046648 Bacteria 9885
110 Ga0495611_0006262 3300046648 Bacteria 5077
111 Ga0495625_0065891 3300046660 Bacteria 2552
112 Ga0495659_0000759 3300046664 Bacteria 11585
113 Ga0495649_0036921 3300046694 Bacteria 2684
114 Ga0495636_0000277 3300047318 Bacteria 20095
115 Ga0495672_0006617 3300047320 Bacteria 8920
116 Ga0495672_0006870 3300047320 Bacteria 8681
117 Ga0495683_0006918 3300047323 Bacteria 6162
118 Ga0495687_000498 3300047443 Bacteria 47324
119 Ga0495677_0002099 3300047445 Bacteria 7927
120 Ga0495677_0008853 3300047445 Bacteria 3727
121 Ga0495685_000010 3300047447 Bacteria 84950
122 Ga0495673_0000951 3300047469 Bacteria 26188
123 Ga0495686_0000015 3300047472 Bacteria 471703
124 Ga0495686_0010866 3300047472 Bacteria 6448
125 Ga0496117_0000228 3300048920 Bacteria 106070
126 Ga0496118_0000005 3300048921 Bacteria 697350
127 Ga0496119_0004006 3300048922 Bacteria 14901
128 Ga0496119_0018134 3300048922 Bacteria 5256
129 Ga0496120_0002153 3300048923 Bacteria 20987
130 Ga0496121_0000522 3300048924 Bacteria 73298
131 Ga0496124_0052938 3300048927 Bacteria 3445
132 Ga0496125_0001081 3300048928 Bacteria 41966
133 Ga0496125_0007251 3300048928 Bacteria 11811
134 Ga0496125_0029275 3300048928 Bacteria 4953
135 Ga0496126_0002314 3300048929 Bacteria 26123
136 Ga0495678_002400 3300049459 Bacteria 12787
137 Ga0495682_0000220 3300049460 Bacteria 44695
138 Ga0501046_0014303 3300049580 Bacteria 6701
139 Ga0501047_0028654 3300049581 Bacteria 5371
140 nmdc:mga00v17_608_c1 3300050491 Bacteria 19798
141 Ga0500644_0000132 3300053088 Bacteria 45910
142 Ga0500608_000493 3300053122 Bacteria 14789
143 Ga0500559_0000458 3300053136 Bacteria 28993
144 Ga0500564_003142 3300053138 Bacteria 6324
145 Ga0500622_0002147 3300053156 Bacteria 14639
146 Ga0500622_0002186 3300053156 Bacteria 14457
147 Ga0500622_0003762 3300053156 Bacteria 9908
148 Ga0500622_0009773 3300053156 Bacteria 5295
149 Ga0500622_0023740 3300053156 Bacteria 3247

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0201513 Ga0466967_0201513_15_1808 575
2 3300046660 Ga0495625_0065891 Ga0495625_0065891_770_2542 577
3 3300025913 Ga0207695_10019355 Ga0207695_100193552 619
4 3300046472 Ga0495580_0030568 Ga0495580_0030568_30_2030 651
5 3300049580 Ga0501046_0014303 Ga0501046_0014303_2122_4194 675
6 3300049581 Ga0501047_0028654 Ga0501047_0028654_2055_4127 675
7 3300044684 Ga0466966_0031244 Ga0466966_0031244_17_2137 676
8 3300047472 Ga0495686_0000015 Ga0495686_0000015_114951_117191 680
9 3300053136 Ga0500559_0000458 Ga0500559_0000458_6918_9032 680
10 3300046694 Ga0495649_0036921 Ga0495649_0036921_68_2401 687
11 3300005337 Ga0070682_100008476 Ga0070682_1000084762 690
12 3300009093 Ga0105240_10023307 Ga0105240_100233077 690
13 3300053156 Ga0500622_0002186 Ga0500622_0002186_4710_6812 690
14 iso_pu_bacteria 2857504554 2857508316 691
15 iso_pu_bacteria 2928531327 2928535914 691
16 3300003759 Ga0055525_1000004 Ga0055525_1000004598 693
17 3300005719 Ga0068861_100006330 Ga0068861_1000063302 693
18 3300025230 Ga0209563_100013 Ga0209563_100013597 693
19 3300026118 Ga0207675_100000912 Ga0207675_1000009128 693
20 3300005455 Ga0070663_100001887 Ga0070663_1000018877 694
21 3300005459 Ga0068867_100025570 Ga0068867_1000255702 694
22 3300026067 Ga0207678_10008505 Ga0207678_100085053 694
23 iso_pu_bacteria 2919138771 2919140488 694
24 3300003794 Ga0055531_10000001 Ga0055531_10000001324 696
25 3300025298 Ga0209050_1002304 Ga0209050_100230413 696
26 3300025304 Ga0209257_1000033 Ga0209257_1000033412 696
27 3300053156 Ga0500622_0023740 Ga0500622_0023740_1097_3208 696
28 3300046453 Ga0495627_002351 Ga0495627_002351_272_2419 697
29 3300046524 Ga0495648_0000334 Ga0495648_0000334_35501_37603 697
30 3300003771 Ga0055526_1000029 Ga0055526_1000029116 699
31 3300009093 Ga0105240_10000871 Ga0105240_1000087112 699
32 3300025295 Ga0209564_1000009 Ga0209564_100000917 699
33 3300046512 Ga0495610_0000117 Ga0495610_0000117_44291_46417 699
34 3300046522 Ga0495643_0000093 Ga0495643_0000093_97009_99135 699
35 3300047320 Ga0495672_0006617 Ga0495672_0006617_1730_3880 699
36 3300031247 Ga0265340_10010282 Ga0265340_100102822 700
37 iso_pu_bacteria 2958512119 2958513507 700
38 3300005535 Ga0070684_100082385 Ga0070684_1000823852 701
39 3300005548 Ga0070665_100036444 Ga0070665_1000364442 701
40 3300047469 Ga0495673_0000951 Ga0495673_0000951_18013_20133 703
41 3300053088 Ga0500644_0000132 Ga0500644_0000132_25517_27637 703
42 3300053138 Ga0500564_003142 Ga0500564_003142_3577_5697 703
43 3300030521 Ga0307511_10001702 Ga0307511_100017023 704
44 3300046474 Ga0495605_0000068 Ga0495605_0000068_23830_25998 704
45 3300046507 Ga0495606_0042903 Ga0495606_0042903_707_2848 704
46 3300048920 Ga0496117_0000228 Ga0496117_0000228_102970_105237 704
47 3300048921 Ga0496118_0000005 Ga0496118_0000005_208785_211052 704
48 3300048922 Ga0496119_0004006 Ga0496119_0004006_4379_6769 704
49 3300048922 Ga0496119_0018134 Ga0496119_0018134_2056_4323 704
50 3300048927 Ga0496124_0052938 Ga0496124_0052938_716_2983 704
51 3300048928 Ga0496125_0029275 Ga0496125_0029275_1422_3812 704
52 iso_pu_bacteria 2884634485 2884637829 704
53 iso_pu_bacteria 2919692658 2919696444 704
54 iso_pu_bacteria 2833640130 2833642214 705
55 3300026035 Ga0207703_10000240 Ga0207703_1000024011 706
56 3300026089 Ga0207648_10038246 Ga0207648_100382462 706
57 3300031247 Ga0265340_10001784 Ga0265340_100017846 706
58 3300048924 Ga0496121_0000522 Ga0496121_0000522_3828_6089 706
59 3300005367 Ga0070667_100010091 Ga0070667_1000100914 707
60 3300005458 Ga0070681_10054274 Ga0070681_100542742 707
61 3300005530 Ga0070679_100022765 Ga0070679_1000227653 707
62 3300009101 Ga0105247_10000522 Ga0105247_100005228 707
63 3300014325 Ga0163163_10028188 Ga0163163_100281882 707
64 3300014968 Ga0157379_10018906 Ga0157379_100189062 707
65 3300025900 Ga0207710_10000196 Ga0207710_1000019629 707
66 3300025921 Ga0207652_10031064 Ga0207652_100310643 707
67 3300028381 Ga0268264_10008546 Ga0268264_100085466 707
68 3300035113 Ga0373936_0001148 Ga0373936_0001148_6606_8789 707
69 3300048928 Ga0496125_0007251 Ga0496125_0007251_2805_5051 707
70 3300005563 Ga0068855_100002914 Ga0068855_1000029147 708
71 3300025949 Ga0207667_10004623 Ga0207667_100046236 708
72 3300032004 Ga0307414_10000124 Ga0307414_1000012432 708
73 3300053122 Ga0500608_000493 Ga0500608_000493_12_2183 708
74 3300009545 Ga0105237_10044097 Ga0105237_100440973 709
75 3300028794 Ga0307515_10002927 Ga0307515_100029278 709
76 3300032004 Ga0307414_10000278 Ga0307414_1000027812 709
77 3300035695 Ga0373927_0031514 Ga0373927_0031514_1162_3360 709
78 3300048923 Ga0496120_0002153 Ga0496120_0002153_16948_19311 709
79 3300053156 Ga0500622_0002147 Ga0500622_0002147_1226_3373 709
80 3300005617 Ga0068859_100020705 Ga0068859_1000207054 710
81 3300006931 Ga0097620_100020705 Ga0097620_1000207054 710
82 3300025942 Ga0207689_10028140 Ga0207689_100281403 710
83 3300026075 Ga0207708_10025842 Ga0207708_100258423 710
84 3300026088 Ga0207641_10000247 Ga0207641_1000024716 710
85 3300026118 Ga0207675_100023037 Ga0207675_1000230374 710
86 3300041452 Ga0451793_1714212 Ga0451793_1714212_365_2518 710
87 3300044712 Ga0453684_0003558 Ga0453684_0003558_27278_29440 710
88 3300045051 Ga0451576_0001256 Ga0451576_0001256_39243_41408 710
89 3300046460 Ga0495638_0000633 Ga0495638_0000633_5391_7538 710
90 3300005548 Ga0070665_100018903 Ga0070665_1000189034 711
91 3300009093 Ga0105240_10087343 Ga0105240_100873432 711
92 3300009553 Ga0105249_10021768 Ga0105249_100217682 711
93 3300028379 Ga0268266_10000783 Ga0268266_1000078310 711
94 3300028379 Ga0268266_10029028 Ga0268266_100290283 711
95 3300031235 Ga0265330_10003731 Ga0265330_100037313 711
96 3300031247 Ga0265340_10001251 Ga0265340_100012513 711
97 3300031344 Ga0265316_10006514 Ga0265316_100065146 711
98 3300031595 Ga0265313_10011732 Ga0265313_100117322 711
99 3300046452 Ga0495617_000670 Ga0495617_000670_5774_7966 711
100 3300046460 Ga0495638_0002562 Ga0495638_0002562_9797_11989 711
101 3300046474 Ga0495605_0001469 Ga0495605_0001469_4687_6879 711
102 3300046491 Ga0495584_0000207 Ga0495584_0000207_36433_38625 711
103 3300046492 Ga0495585_0015012 Ga0495585_0015012_1537_3729 711
104 3300046492 Ga0495585_0045783 Ga0495585_0045783_146_2338 711
105 3300046501 Ga0495607_0007261 Ga0495607_0007261_577_2769 711
106 3300046501 Ga0495607_0018589 Ga0495607_0018589_1120_3312 711
107 3300046501 Ga0495607_0020848 Ga0495607_0020848_812_3004 711
108 3300046506 Ga0495583_0000330 Ga0495583_0000330_46946_49138 711
109 3300046513 Ga0495616_0000602 Ga0495616_0000602_11105_13297 711
110 3300046523 Ga0495644_0001959 Ga0495644_0001959_5545_7737 711
111 3300046523 Ga0495644_0004019 Ga0495644_0004019_403_2595 711
112 3300046524 Ga0495648_0000599 Ga0495648_0000599_10657_12849 711
113 3300046538 Ga0495609_0001493 Ga0495609_0001493_9324_11516 711
114 3300046538 Ga0495609_0012060 Ga0495609_0012060_1537_3729 711
115 3300046558 Ga0495633_0000928 Ga0495633_0000928_20340_22532 711
116 3300046558 Ga0495633_0015573 Ga0495633_0015573_681_2873 711
117 3300046615 Ga0495656_0005308 Ga0495656_0005308_1103_3295 711
118 3300046648 Ga0495611_0001917 Ga0495611_0001917_387_2579 711
119 3300046648 Ga0495611_0006262 Ga0495611_0006262_2536_4728 711
120 3300046664 Ga0495659_0000759 Ga0495659_0000759_2530_4722 711
121 3300047318 Ga0495636_0000277 Ga0495636_0000277_15406_17598 711
122 3300047320 Ga0495672_0006870 Ga0495672_0006870_5075_7267 711
123 3300047323 Ga0495683_0006918 Ga0495683_0006918_3653_5845 711
124 3300047443 Ga0495687_000498 Ga0495687_000498_3667_5859 711
125 3300047445 Ga0495677_0002099 Ga0495677_0002099_403_2595 711
126 3300047445 Ga0495677_0008853 Ga0495677_0008853_1004_3196 711
127 3300047447 Ga0495685_000010 Ga0495685_000010_28536_30728 711
128 3300048929 Ga0496126_0002314 Ga0496126_0002314_9851_12028 711
129 3300049459 Ga0495678_002400 Ga0495678_002400_8061_10253 711
130 3300049460 Ga0495682_0000220 Ga0495682_0000220_22795_24987 711
131 3300003316 rootH1_10013304 rootH1_100133042 712
132 3300053156 Ga0500622_0009773 Ga0500622_0009773_1865_4048 712
133 3300005548 Ga0070665_100062181 Ga0070665_1000621813 713
134 3300038705 Ga0237819_00091 Ga0237819_00091_2799_4955 713
135 3300053156 Ga0500622_0003762 Ga0500622_0003762_1571_3763 716
136 3300033180 Ga0307510_10004406 Ga0307510_100044068 717
137 iso_pu_bacteria 2808606418 2809143650 717
138 3300028381 Ga0268264_10000057 Ga0268264_1000005731 718
139 3300028381 Ga0268264_10000165 Ga0268264_1000016547 718
140 3300033180 Ga0307510_10000014 Ga0307510_10000014196 718
141 3300013308 Ga0157375_10035409 Ga0157375_100354093 719
142 3300047472 Ga0495686_0010866 Ga0495686_0010866_2702_4879 721
143 3300002773 JGI25152J39213_1000036 JGI25152J39213_100003673 723
144 3300002774 JGI25150J39212_1000156 JGI25150J39212_100015628 723
145 3300003187 JGI25151J46595_10000133 JGI25151J46595_1000013343 723
146 3300003215 JGI25153J46596_10000058 JGI25153J46596_1000005842 723
147 3300025245 Ga0207425_1000011 Ga0207425_1000011384 723
148 3300025258 Ga0209129_1000031 Ga0209129_1000031198 723
149 3300025294 Ga0209025_1000012 Ga0209025_1000012698 723
150 3300025297 Ga0209758_1000143 Ga0209758_1000143109 723
151 3300025913 Ga0207695_10105585 Ga0207695_101055852 723
152 3300025941 Ga0207711_10045215 Ga0207711_100452152 723
153 3300026035 Ga0207703_10001782 Ga0207703_100017825 723
154 3300031730 Ga0307516_10069558 Ga0307516_100695582 723
155 3300042007 Ga0439449_0000151 Ga0439449_0000151_13424_15628 723
156 3300048928 Ga0496125_0001081 Ga0496125_0001081_13783_16044 723
157 3300050491 nmdc:mga00v17_608_c1 nmdc:mga00v17_608_c1_5389_7632 723

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07488

Glyco_hydro_67M

Glycosyl hydrolase family 67 middle domain

220

540

1

PF07477

Glyco_hydro_67C

Glycosyl hydrolase family 67 C-terminus

541

753

0.98

PF03648

Glyco_hydro_67N

Glycosyl hydrolase family 67 N-terminus

104

217

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gql-assembly1.cif.gz_B structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with glucuronic acid and xylotriose 0.9781 34 712
1h41-assembly1.cif.gz_B pseudomonas cellulosa e292a alpha-d-glucuronidase mutant complexed with aldotriuronic acid 0.9731 34 712
1h41-assembly1.cif.gz_A pseudomonas cellulosa e292a alpha-d-glucuronidase mutant complexed with aldotriuronic acid 0.9691 34 712
1gql-assembly1.cif.gz_B structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with glucuronic acid and xylotriose 0.9477 34 712
1h41-assembly1.cif.gz_B pseudomonas cellulosa e292a alpha-d-glucuronidase mutant complexed with aldotriuronic acid 0.9416 34 712
ID Description Score Start End Superfamily
1gqkA03 Alpha Beta;Alpha-Beta Complex;Alpha-d-glucuronidase, C-terminal Domain;Alpha-glucuronidase, C-terminal domain 0.9721 498 712 3.90.1330.10
1mqqA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.961 175 495 3.20.20.80
1gqlA01 Alpha Beta;2-Layer Sandwich;Chitobiase; domain 2;Chitobiase/beta-hexosaminidase domain 2-like 0.938 34 173 3.30.379.10
1gqiA01 Alpha Beta;2-Layer Sandwich;Chitobiase; domain 2;Chitobiase/beta-hexosaminidase domain 2-like 0.9379 51 171 3.30.379.10
1l8nA03 Alpha Beta;Alpha-Beta Complex;Alpha-d-glucuronidase, C-terminal Domain;Alpha-glucuronidase, C-terminal domain 0.9373 497 703 3.90.1330.10
ID Description Score Start End GO Terms
AF-A0A537JTH5-F1-model_v4 Alpha-glucuronidase 0.9955 255 329 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A366QL30-F1-model_v4 deleted 0.9921 212 315
AF-A0A7C4WXT1-F1-model_v4 Alpha-glucuronidase 0.9893 590 691 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A4Q5YVH0-F1-model_v4 Alpha-glucuronidase 0.9878 124 528 GO:0005576
GO:0033939
GO:0045493
GO:0046559
AF-A0A6J4H3Y5-F1-model_v4 GH67 (EC 3.2.1.131) 0.9874 141 722 GO:0005576
GO:0033939
GO:0045493
GO:0046559

Feature Viewer

pLDDT pTM Quality
89.93 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map