F228199

General Info

Members Datasets Scaffolds Average Seq Length
157 130 314 506

Family's Representative Sequence

Representative Sequence 3300048920|Ga0496117_0010033|Ga0496117_0010033_3829_5475
Length 548
Sequence MEIGNPLLKRKLGFLTPKYETGHDFDNAFRRPIATMTVYTNSNYRRLNAVSFKVAFIGAGSIGFTRGILRDLLSVPEFNDIEVAFTDISQHNLDMVTELCQRDIRENGLSIQIQSSTDRKIALKDAKYVICTIRVGGLEGFATDVDIPLKYGVDQCVGDTLCAGGIMYGQRGIAEMLAICKDIRELSAPDVLLLNYSNPMAMITWACNKYSGVRTIGLCHGVQHGHHQIAEVYGLEKQDVDIVCAGINHQTWYIQASHEGKDLTAGLLEAFEKHPEYSRTEKVRIDMLRRFGYYSTESNGHLSEYVPWYRKRPNEILDWIDLGSWINGETGGYLRVCTEGRNWFETDFPNWMKEDPLEYKAENRGEEHGSYIIEGLETGRVYRGHFNVVNNGVISNLPDDAIIEAPGYVDRNGISMPHVGDLPLGLAAVCNVSISVQRLAVEAAVHGDDKLLRQAFMMDPLVGAVCNPKEIWQMVDEMLVAQEAWLPQYGAAIVEARQRLAAGDLIPTRPYEGAARLKVKTVEEMQLDRDAANKNAGQSDKGKDREKV

Samples

Sample ID Description Type Environment
1 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
4 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
26 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
39 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
40 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
41 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
42 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
47 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
53 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
54 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
59 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
60 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
61 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
62 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
63 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
64 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
65 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
66 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
70 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
71 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
72 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
73 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
74 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
75 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
76 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
77 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
78 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
79 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
80 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
81 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
82 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
83 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
84 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
85 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
86 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
87 2818991441 Niallia circulans 3243 Isolate Rhizosphere
88 2818991459 Paenibacillus sp. 597 Isolate Unclassified
89 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
90 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
91 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
92 2857472729 Cohnella sp. R-74144 Isolate Unclassified
93 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
94 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
95 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
96 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
97 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
98 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
99 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
100 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
101 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
102 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
103 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
104 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
105 2909042592 Labrys sp. LIt4 Isolate Nodule
106 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
107 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
108 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
109 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
110 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
111 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
112 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
113 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
114 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
115 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
116 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
117 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
118 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
119 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
120 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
121 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
122 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
123 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
124 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
125 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
126 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
127 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
128 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
129 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
130 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 62.42
Metatranscriptomes 0
Isolates 37.58

Biome Distribution

Category Percentage (%)
Aerial Root 1.27
Bulb 0
Endosphere 4.46
Nodule 0.64
Rhizoplane 0
Rhizosphere 67.52
Stem 0
Stem Tuber 0
Unclassified 1.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496117_0010033 3300048920 Bacteria 8702
2 rootH2_10006770 3300003320 Bacteria 84270
3 Ga0055538_1000104 3300003751 Bacteria 67342
4 Ga0055541_1006437 3300003841 Bacteria 1989
5 Ga0065707_10126189 3300005295 Unclassified 2008
6 Ga0070658_10001248 3300005327 Bacteria 21800
7 Ga0070658_10002517 3300005327 Bacteria 15294
8 Ga0070660_100057989 3300005339 Bacteria 3001
9 Ga0070706_100108799 3300005467 Bacteria 2579
10 Ga0070698_100075250 3300005471 Bacteria 3380
11 Ga0070704_100048453 3300005549 Unclassified 2974
12 Ga0068855_100011486 3300005563 Bacteria 10703
13 Ga0068855_100062200 3300005563 Bacteria 4359
14 Ga0068859_100096410 3300005617 Bacteria 3010
15 Ga0068858_100003719 3300005842 Bacteria 15104
16 Ga0097620_100096411 3300006931 Bacteria 3010
17 Ga0105251_10023161 3300009011 Bacteria 3210
18 Ga0105244_10017273 3300009036 Bacteria 4082
19 Ga0105244_10019317 3300009036 Bacteria 3808
20 Ga0105240_10000062 3300009093 Bacteria 217037
21 Ga0105237_10000494 3300009545 Bacteria 55798
22 Ga0105237_10120923 3300009545 Bacteria 2613
23 Ga0105238_10007515 3300009551 Bacteria 10917
24 Ga0105239_10007650 3300010375 Bacteria 12381
25 Ga0105246_10001064 3300011119 Bacteria 15864
26 Ga0157374_10009912 3300013296 Bacteria 8180
27 Ga0209784_100038 3300025224 Bacteria 253212
28 Ga0209566_100113 3300025225 Bacteria 109893
29 Ga0209566_100923 3300025225 Bacteria 13685
30 Ga0209437_100697 3300025233 Bacteria 17602
31 Ga0207705_10009691 3300025909 Bacteria 7005
32 Ga0207684_10124945 3300025910 Bacteria 2207
33 Ga0207695_10000138 3300025913 Bacteria 217045
34 Ga0207671_10000391 3300025914 Bacteria 61281
35 Ga0207657_10073605 3300025919 Bacteria 2887
36 Ga0207694_10039846 3300025924 Bacteria 3616
37 Ga0207667_10016007 3300025949 Bacteria 8491
38 Ga0207667_10146065 3300025949 Bacteria 2434
39 Ga0207703_10003633 3300026035 Bacteria 12860
40 Ga0207708_10040095 3300026075 Bacteria 3569
41 Ga0265319_1013687 3300028563 Bacteria 3212
42 Ga0307515_10000056 3300028794 Bacteria 261973
43 Ga0307515_10136953 3300028794 Unclassified 2655
44 Ga0265320_10005471 3300031240 Bacteria 8146
45 Ga0265320_10048271 3300031240 Bacteria 2079
46 Ga0307513_10084671 3300031456 Bacteria 3256
47 Ga0316576_10057153 3300031727 Bacteria 2851
48 Ga0316578_10003283 3300031728 Bacteria 7359
49 Ga0316577_10004570 3300031733 Bacteria 7164
50 Ga0373927_0021430 3300035695 Bacteria 4236
51 Ga0373937_0059600 3300036401 Bacteria 3508
52 Ga0316582_0019749 3300036647 Bacteria 3950
53 Ga0316584_0008992 3300036712 Bacteria 6909
54 Ga0316584_0078898 3300036712 Bacteria 2466
55 Ga0373925_0000146 3300037068 Bacteria 75193
56 Ga0395899_0005941 3300037312 Bacteria 9479
57 Ga0395900_0107069 3300037418 Bacteria 2872
58 Ga0395898_0020071 3300037466 Bacteria 6791
59 Ga0395905_0000239 3300037471 Bacteria 83128
60 Ga0395905_0024347 3300037471 Bacteria 5715
61 Ga0436364_1291609 3300037853 Bacteria 13114
62 Ga0400483_188647 3300039062 Bacteria 4346
63 Ga0439433_0006346 3300041999 Bacteria 2544
64 Ga0439449_0001288 3300042007 Bacteria 9821
65 Ga0439449_0041451 3300042007 Bacteria 1711
66 Ga0453684_0001133 3300044712 Bacteria 83416
67 Ga0453684_0006736 3300044712 Bacteria 21649
68 Ga0453684_0009707 3300044712 Bacteria 16747
69 Ga0453684_0015896 3300044712 Bacteria 11834
70 Ga0453684_0016580 3300044712 Bacteria 11501
71 Ga0453684_0038911 3300044712 Bacteria 6489
72 Ga0453684_0128483 3300044712 Bacteria 3045
73 Ga0466959_0014621 3300045049 Bacteria 5710
74 Ga0451576_0011282 3300045051 Bacteria 10169
75 Ga0451576_0091050 3300045051 Bacteria 3173
76 Ga0495618_0048813 3300046514 Bacteria 2673
77 Ga0495684_0045276 3300047471 Bacteria 3367
78 Ga0496116_0008564 3300048919 Bacteria 8858
79 Ga0496116_0022863 3300048919 Bacteria 4669
80 Ga0496120_0004893 3300048923 Bacteria 10908
81 Ga0496121_0027595 3300048924 Bacteria 5310
82 Ga0496121_0038762 3300048924 Bacteria 4211
83 Ga0496121_0186885 3300048924 Bacteria 1489
84 Ga0496122_0010618 3300048925 Bacteria 9459
85 Ga0496122_0047597 3300048925 Bacteria 3309
86 Ga0496124_0001436 3300048927 Bacteria 35241
87 Ga0496124_0067983 3300048927 Bacteria 2963
88 Ga0496125_0000340 3300048928 Bacteria 89358
89 Ga0496125_0013172 3300048928 Bacteria 8147
90 Ga0496125_0041058 3300048928 Bacteria 3960
91 Ga0496126_0005965 3300048929 Bacteria 13699
92 Ga0496126_0006895 3300048929 Bacteria 12584
93 Ga0501047_0092043 3300049581 Bacteria 2911
94 Ga0501044_0003974 3300049823 Bacteria 16563
95 nmdc:mga05p37_305039_c1 3300050507 Bacteria 1890
96 nmdc:mga05p37_63391_c1 3300050507 Bacteria 4548
97 nmdc:mga09592_33109_c1 3300050508 Bacteria 4312
98 Ga0500556_0004647 3300053104 Bacteria 3897
99 2512730087 2512564039 Bacteria 8739048
100 2515851168 2515154155 Bacteria 7985436
101 2550904328 2548877040 Bacteria 7507281
102 2571532833 2571042143 Bacteria 6986194
103 2587737622 2585428059 Bacteria 8696589
104 2595317196 2593339198 Bacteria 7267884
105 2643737256 2643221543 Bacteria 6628015
106 2644423299 2643221676 Bacteria 8119172
107 2676474998 2675903058 Bacteria 6822861
108 2723602553 2721755693 Bacteria 6126117
109 2728532905 2728368933 Bacteria 7044283
110 2730138546 2728369359 Bacteria 5621728
111 2753809296 2751185905 Bacteria 6142767
112 2793184359 2791355222 Bacteria 5898266
113 2802439095 2802428803 Bacteria 5806948
114 2819570686 2818991441 Bacteria 5062707
115 2819670689 2818991459 Bacteria 8736032
116 2821115491 2821111986 Bacteria 6894338
117 2827630833 2827628540 Bacteria 6858585
118 2857458537 2857453340 Bacteria 8090534
119 2857478741 2857472729 Bacteria 6568124
120 2857605393 2857604169 Bacteria 5111450
121 2864738293 2864733723 Bacteria 6770668
122 2885531029 2885526491 Bacteria 7164189
123 2888580015 2888578766 Bacteria 6743310
124 2889043578 2889042446 Bacteria 7618936
125 2889051374 2889049205 Bacteria 7524325
126 2889278520 2889276214 Bacteria 5979355
127 2904113961 2904113452 Bacteria 7796941
128 2904166703 2904162308 Bacteria 7086713
129 2904495227 2904490793 Bacteria 7046938
130 2904600313 2904595352 Bacteria 6124848
131 2904759940 2904755435 Bacteria 7986759
132 2909048425 2909042592 Bacteria 6499737
133 2916973951 2916971899 Bacteria 4250608
134 2919163576 2919160200 Bacteria 6929020
135 2919429213 2919425241 Bacteria 8055701
136 2931387039 2931384279 Bacteria 7299545
137 2938651276 2938649242 Bacteria 7118381
138 2939682360 2939679117 Bacteria 6921672
139 2945994363 2945991243 Bacteria 7008369
140 2946057139 2946053406 Bacteria 6978655
141 2968563203 2968558590 Bacteria 6956864
142 2971405089 2971403814 Bacteria 7370929
143 2971417450 2971410472 Bacteria 8311090
144 2984528021 2984527788 Bacteria 5288478
145 2984534132 2984532647 Bacteria 5288506
146 2988225561 2988225383 Bacteria 7221625
147 2996634028 2996632988 Bacteria 6921523
148 2996709723 2996706504 Bacteria 5757485
149 3001269353 3001267043 Bacteria 4823521
150 3001274736 3001272096 Bacteria 4729684
151 3006986731 3006984091 Bacteria 4207523
152 3006991249 3006988479 Bacteria 4767936
153 648168925 648028048 Bacteria 5394884
154 8002323329 8002317523 Bacteria 8051857
155 8046991840 8046991243 Bacteria 8497463
156 8054467335 8054465665 Bacteria 7323556
157 8056540134 8056533031 Bacteria 8964429
158 Ga0496117_0010033
159 rootH2_10006770
160 Ga0055538_1000104
161 Ga0055541_1006437
162 Ga0065707_10126189
163 Ga0070658_10001248
164 Ga0070658_10002517
165 Ga0070660_100057989
166 Ga0070706_100108799
167 Ga0070698_100075250
168 Ga0070704_100048453
169 Ga0068855_100011486
170 Ga0068855_100062200
171 Ga0068859_100096410
172 Ga0068858_100003719
173 Ga0097620_100096411
174 Ga0105251_10023161
175 Ga0105244_10017273
176 Ga0105244_10019317
177 Ga0105240_10000062
178 Ga0105237_10000494
179 Ga0105237_10120923
180 Ga0105238_10007515
181 Ga0105239_10007650
182 Ga0105246_10001064
183 Ga0157374_10009912
184 Ga0209784_100038
185 Ga0209566_100113
186 Ga0209566_100923
187 Ga0209437_100697
188 Ga0207705_10009691
189 Ga0207684_10124945
190 Ga0207695_10000138
191 Ga0207671_10000391
192 Ga0207657_10073605
193 Ga0207694_10039846
194 Ga0207667_10016007
195 Ga0207667_10146065
196 Ga0207703_10003633
197 Ga0207708_10040095
198 Ga0265319_1013687
199 Ga0307515_10000056
200 Ga0307515_10136953
201 Ga0265320_10005471
202 Ga0265320_10048271
203 Ga0307513_10084671
204 Ga0316576_10057153
205 Ga0316578_10003283
206 Ga0316577_10004570
207 Ga0373927_0021430
208 Ga0373937_0059600
209 Ga0316582_0019749
210 Ga0316584_0008992
211 Ga0316584_0078898
212 Ga0373925_0000146
213 Ga0395899_0005941
214 Ga0395900_0107069
215 Ga0395898_0020071
216 Ga0395905_0000239
217 Ga0395905_0024347
218 Ga0436364_1291609
219 Ga0400483_188647
220 Ga0439433_0006346
221 Ga0439449_0001288
222 Ga0439449_0041451
223 Ga0453684_0001133
224 Ga0453684_0006736
225 Ga0453684_0009707
226 Ga0453684_0015896
227 Ga0453684_0016580
228 Ga0453684_0038911
229 Ga0453684_0128483
230 Ga0466959_0014621
231 Ga0451576_0011282
232 Ga0451576_0091050
233 Ga0495618_0048813
234 Ga0495684_0045276
235 Ga0496116_0008564
236 Ga0496116_0022863
237 Ga0496120_0004893
238 Ga0496121_0027595
239 Ga0496121_0038762
240 Ga0496121_0186885
241 Ga0496122_0010618
242 Ga0496122_0047597
243 Ga0496124_0001436
244 Ga0496124_0067983
245 Ga0496125_0000340
246 Ga0496125_0013172
247 Ga0496125_0041058
248 Ga0496126_0005965
249 Ga0496126_0006895
250 Ga0501047_0092043
251 Ga0501044_0003974
252 nmdc:mga05p37_305039_c1
253 nmdc:mga05p37_63391_c1
254 nmdc:mga09592_33109_c1
255 Ga0500556_0004647
256 2512730087
257 2515851168
258 2550904328
259 2571532833
260 2587737622
261 2595317196
262 2643737256
263 2644423299
264 2676474998
265 2723602553
266 2728532905
267 2730138546
268 2753809296
269 2793184359
270 2802439095
271 2819570686
272 2819670689
273 2821115491
274 2827630833
275 2857458537
276 2857478741
277 2857605393
278 2864738293
279 2885531029
280 2888580015
281 2889043578
282 2889051374
283 2889278520
284 2904113961
285 2904166703
286 2904495227
287 2904600313
288 2904759940
289 2909048425
290 2916973951
291 2919163576
292 2919429213
293 2931387039
294 2938651276
295 2939682360
296 2945994363
297 2946057139
298 2968563203
299 2971405089
300 2971417450
301 2984528021
302 2984534132
303 2988225561
304 2996634028
305 2996709723
306 3001269353
307 3001274736
308 3006986731
309 3006991249
310 648168925
311 8002323329
312 8046991840
313 8054467335
314 8056540134

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02056

Glyco_hydro_4

Family 4 glycosyl hydrolase

53

235

0.97

PF11975

Glyco_hydro_4C

Family 4 glycosyl hydrolase C-terminal domain

244

462

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c3m-assembly1.cif.gz_A-2 crystal structure of gan4c, a gh4 6-phospho-glucosidase from geobacillus stearothermophilus 0.8744 4 455
1s6y-assembly1.cif.gz_A 2.3a crystal structure of phospho-beta-glucosidase 0.8715 4 455
5c3m-assembly1.cif.gz_A-2 crystal structure of gan4c, a gh4 6-phospho-glucosidase from geobacillus stearothermophilus 0.8704 4 455
3fef-assembly1.cif.gz_A crystal structure of putative glucosidase lpld from bacillus subtilis 0.8699 3 445
3fef-assembly1.cif.gz_A crystal structure of putative glucosidase lpld from bacillus subtilis 0.8642 3 445
ID Description Score Start End Superfamily
1up7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9128 2 162 3.40.50.720
1vjtA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9045 4 84 3.40.50.720
af_P06720_1_444_3.90.1820.10 Alpha Beta;Alpha-Beta Complex;LDH C-terminal domain-like;AglA-like glucosidase 0.8918 1 447 3.90.1820.10
1s6yA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8848 4 162 3.40.50.720
af_P06720_1_444_3.90.1820.10 Alpha Beta;Alpha-Beta Complex;LDH C-terminal domain-like;AglA-like glucosidase 0.8802 1 447 3.90.1820.10
ID Description Score Start End GO Terms
AF-A0A2R6DU52-F1-model_v4 Alpha-glucosidase/alpha-galactosidase 0.9905 4 89 GO:0004553
GO:0005975
AF-A0A4Q3YD87-F1-model_v4 Alpha-glucosidase/alpha-galactosidase 0.9872 97 438 GO:0004553
GO:0005975
GO:0016616
GO:0046872
AF-A0A528HBV9-F1-model_v4 Alpha-glucosidase/alpha-galactosidase 0.9862 4 171 GO:0004553
GO:0005975
GO:0046872
AF-A0A7X7YC00-F1-model_v4 Alpha-glucosidase/alpha-galactosidase 0.9859 2 488 GO:0004553
GO:0005975
GO:0016616
GO:0046872
AF-A0A3A0BA67-F1-model_v4 Alpha-glucosidase/alpha-galactosidase 0.9842 2 389 GO:0004553
GO:0005975
GO:0016616
GO:0046872

Map