F227915

General Info

Members Datasets Scaffolds Average Seq Length
157 72 314 163

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0105233|Ga0451577_0105233_1345_1875
Length 176
Sequence MTDSLSIHEQLKALLEREGADFRVVEHIAEGHTELIAKIRGNRTEQAIKSIVVMIRFGTPALAGGARKNEPRYALANVPGDCRVDLKGIRDLYGGSQAAFAPREKAEALTGCVIGAIPPFSFSDQLEVLADPLIQENDEVVFNAGRLDRSIFMKCADYFRVAKPRVVKIAIRAEKM

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
61 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
63 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
64 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
65 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
66 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
67 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
68 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
69 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
70 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
71 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
72 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 26.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0105233 3300042876 Bacteria 2522
2 SwRhRL3b_contig_2832549 2162886006 Unclassified 947
3 MRS1b_contig_1361774 2162886011 Unclassified 890
4 JGI25406J46586_10096747 3300003203 Unclassified 884
5 JGI25406J46586_10097205 3300003203 Bacteria 882
6 Ga0065704_10072555 3300005289 Bacteria 8328
7 Ga0065707_10000483 3300005295 Bacteria 53504
8 Ga0065707_10084828 3300005295 Bacteria 6731
9 Ga0065707_10085020 3300005295 Bacteria 6529
10 Ga0065707_10092583 3300005295 Bacteria 3748
11 Ga0065707_10223685 3300005295 Bacteria 1215
12 Ga0065707_10231698 3300005295 Unclassified 1186
13 Ga0065707_10532784 3300005295 Unclassified 733
14 Ga0070705_100140670 3300005440 Bacteria 1588
15 Ga0070694_100446714 3300005444 Unclassified 1020
16 Ga0070706_100202784 3300005467 Bacteria 1853
17 Ga0070707_100032545 3300005468 Unclassified 4969
18 Ga0070698_100151644 3300005471 Bacteria 2265
19 Ga0070698_100179322 3300005471 Unclassified 2057
20 Ga0070699_100002265 3300005518 Bacteria 17326
21 Ga0070699_100546248 3300005518 Bacteria 1054
22 Ga0070695_101261719 3300005545 Unclassified 609
23 Ga0070696_100397188 3300005546 Bacteria 1078
24 Ga0070696_100886445 3300005546 Unclassified 739
25 Ga0070704_100634642 3300005549 Unclassified 942
26 Ga0070704_100860674 3300005549 Bacteria 813
27 Ga0068859_100049456 3300005617 Bacteria 4221
28 Ga0068864_101247698 3300005618 Bacteria 743
29 Ga0068870_10167398 3300005840 Bacteria 1309
30 Ga0068862_100020773 3300005844 Bacteria 5484
31 Ga0068862_100234566 3300005844 Bacteria 1666
32 Ga0081539_10005847 3300005985 Bacteria 12207
33 Ga0081539_10020267 3300005985 Bacteria 4503
34 Ga0075427_10000618 3300006194 Bacteria 4160
35 Ga0075428_100030368 3300006844 Bacteria 5977
36 Ga0075428_100177305 3300006844 Bacteria 2308
37 Ga0075428_100371191 3300006844 Unclassified 1534
38 Ga0075428_100471713 3300006844 Bacteria 1343
39 Ga0075428_101435588 3300006844 Bacteria 724
40 Ga0075430_100108685 3300006846 Bacteria 2313
41 Ga0075430_100570575 3300006846 Bacteria 933
42 Ga0075430_100587109 3300006846 Bacteria 919
43 Ga0075431_100024710 3300006847 Bacteria 6160
44 Ga0075431_101041512 3300006847 Bacteria 784
45 Ga0075433_10371397 3300006852 Bacteria 1263
46 Ga0075433_10404066 3300006852 Unclassified 1205
47 Ga0075434_100028420 3300006871 Bacteria 5494
48 Ga0075429_100005699 3300006880 Bacteria 10743
49 Ga0075429_100028463 3300006880 Bacteria 4852
50 Ga0075429_100056244 3300006880 Bacteria 3424
51 Ga0075429_100123221 3300006880 Unclassified 2266
52 Ga0097620_100049455 3300006931 Bacteria 4221
53 Ga0111539_10242221 3300009094 Bacteria 2100
54 Ga0114129_10000874 3300009147 Bacteria 39228
55 Ga0114129_10005535 3300009147 Bacteria 17866
56 Ga0114129_10038307 3300009147 Bacteria 6763
57 Ga0114129_10042232 3300009147 Bacteria 6419
58 Ga0114129_11098848 3300009147 Unclassified 996
59 Ga0114129_12211882 3300009147 Unclassified 661
60 Ga0105243_10107362 3300009148 Bacteria 2328
61 Ga0105243_10159631 3300009148 Unclassified 1943
62 Ga0105243_10402557 3300009148 Bacteria 1272
63 Ga0105242_10295731 3300009176 Unclassified 1476
64 Ga0105249_10241485 3300009553 Bacteria 1786
65 Ga0105249_12197112 3300009553 Unclassified 625
66 Ga0105246_10110001 3300011119 Bacteria 2023
67 Ga0157380_10190142 3300014326 Bacteria 1811
68 Ga0157379_10160923 3300014968 Bacteria 2026
69 Ga0207653_10133453 3300025885 Bacteria 903
70 Ga0207684_10181027 3300025910 Bacteria 1817
71 Ga0207709_10131774 3300025935 Bacteria 1705
72 Ga0207709_10459406 3300025935 Bacteria 986
73 Ga0207670_10265608 3300025936 Bacteria 1332
74 Ga0207670_10708758 3300025936 Unclassified 834
75 Ga0207712_10471752 3300025961 Bacteria 1068
76 Ga0207708_10886726 3300026075 Unclassified 771
77 Ga0207676_10045617 3300026095 Unclassified 3388
78 Ga0207676_10215620 3300026095 Unclassified 1706
79 Ga0268265_10030051 3300028380 Bacteria 3909
80 Ga0268265_10469297 3300028380 Bacteria 1179
81 Ga0265326_10030220 3300028558 Bacteria 1543
82 Ga0265318_10008872 3300028577 Bacteria 4455
83 Ga0265338_10013771 3300028800 Bacteria 9088
84 Ga0265324_10063336 3300029957 Bacteria 1263
85 Ga0265320_10005146 3300031240 Bacteria 8439
86 Ga0265331_10019479 3300031250 Bacteria 3504
87 Ga0265316_10536147 3300031344 Unclassified 834
88 Ga0307405_10471941 3300031731 Bacteria 1000
89 Ga0307413_10068856 3300031824 Bacteria 2219
90 Ga0307410_10555535 3300031852 Bacteria 952
91 Ga0307416_100330552 3300032002 Bacteria 1531
92 Ga0316574_0207191 3300035398 Bacteria 1259
93 Ga0451577_0007157 3300042876 Bacteria 11005
94 Ga0451577_0076097 3300042876 Bacteria 2993
95 Ga0451577_0960628 3300042876 Bacteria 768
96 Ga0451577_1156481 3300042876 Bacteria 691
97 Ga0453683_0013879 3300044673 Bacteria 5240
98 Ga0453683_0051264 3300044673 Bacteria 2585
99 Ga0453683_0337995 3300044673 Bacteria 966
100 Ga0453683_0339309 3300044673 Bacteria 964
101 Ga0453683_0426628 3300044673 Unclassified 856
102 Ga0453683_0659463 3300044673 Bacteria 684
103 Ga0453684_0001179 3300044712 Bacteria 81099
104 Ga0453684_0002406 3300044712 Bacteria 45614
105 Ga0453684_0002864 3300044712 Bacteria 40519
106 Ga0453684_0044311 3300044712 Bacteria 5956
107 Ga0453684_0053965 3300044712 Bacteria 5241
108 Ga0453684_0061151 3300044712 Bacteria 4838
109 Ga0453684_0062642 3300044712 Unclassified 4762
110 Ga0453684_0087111 3300044712 Bacteria 3871
111 Ga0453684_0093252 3300044712 Bacteria 3709
112 Ga0453684_0116389 3300044712 Unclassified 3237
113 Ga0453684_0154258 3300044712 Unclassified 2725
114 Ga0453684_0196043 3300044712 Unclassified 2359
115 Ga0453684_0208209 3300044712 Bacteria 2275
116 Ga0453684_0209819 3300044712 Bacteria 2265
117 Ga0453684_0259137 3300044712 Bacteria 1993
118 Ga0453684_0545890 3300044712 Bacteria 1277
119 Ga0453684_0660810 3300044712 Bacteria 1139
120 Ga0453684_1097257 3300044712 Bacteria 841
121 Ga0453684_1187317 3300044712 Unclassified 802
122 Ga0453684_1653894 3300044712 Unclassified 655
123 Ga0453684_1985919 3300044712 Unclassified 586
124 Ga0451576_0006697 3300045051 Bacteria 14050
125 Ga0451576_0043387 3300045051 Unclassified 4746
126 Ga0451576_0100820 3300045051 Bacteria 3003
127 Ga0451576_0152996 3300045051 Bacteria 2406
128 Ga0451576_0271960 3300045051 Bacteria 1771
129 Ga0451576_0308111 3300045051 Unclassified 1656
130 Ga0451576_0522943 3300045051 Bacteria 1247
131 Ga0501299_043834 3300049522 Unclassified 905
132 Ga0501041_0356188 3300049577 Unclassified 925
133 Ga0501072_1519994 3300049588 Unclassified 517
134 Ga0501075_0145735 3300049591 Unclassified 1805
135 Ga0501075_0467504 3300049591 Bacteria 962
136 Ga0501076_0248318 3300049592 Bacteria 1456
137 Ga0501080_0212454 3300049742 Bacteria 1773
138 Ga0501080_1314977 3300049742 Bacteria 619
139 Ga0501081_0438412 3300049743 Unclassified 970
140 Ga0501081_0658870 3300049743 Bacteria 785
141 Ga0501081_0701207 3300049743 Bacteria 760
142 nmdc:mga05p37_1093364_c1 3300050507 Bacteria 836
143 nmdc:mga05p37_211186_c1 3300050507 Bacteria 2346
144 nmdc:mga05p37_314860_c1 3300050507 Unclassified 1854
145 nmdc:mga05p37_349365_c1 3300050507 Bacteria 1742
146 nmdc:mga05p37_3822_c1 3300050507 Bacteria 17609
147 nmdc:mga05p37_89656_c1 3300050507 Bacteria 3790
148 nmdc:mga09592_10404_c1 3300050508 Bacteria 7570
149 nmdc:mga09592_117775_c1 3300050508 Bacteria 2280
150 nmdc:mga09592_4099_c1 3300050508 Bacteria 11768
151 nmdc:mga09592_52606_c1 3300050508 Bacteria 2037
152 nmdc:mga0n895_53270_c1 3300050512 Bacteria 3975
153 nmdc:mga0a205_12977_c1 3300050515 Bacteria 7734
154 nmdc:mga0a205_237971_c1 3300050515 Bacteria 1702
155 Ga0501084_0148081 3300054114 Bacteria 1978
156 Ga0501082_0161249 3300060353 Bacteria 1949
157 Ga0501082_1011631 3300060353 Unclassified 727
158 Ga0451577_0105233
159 SwRhRL3b_contig_2832549
160 MRS1b_contig_1361774
161 JGI25406J46586_10096747
162 JGI25406J46586_10097205
163 Ga0065704_10072555
164 Ga0065707_10000483
165 Ga0065707_10084828
166 Ga0065707_10085020
167 Ga0065707_10092583
168 Ga0065707_10223685
169 Ga0065707_10231698
170 Ga0065707_10532784
171 Ga0070705_100140670
172 Ga0070694_100446714
173 Ga0070706_100202784
174 Ga0070707_100032545
175 Ga0070698_100151644
176 Ga0070698_100179322
177 Ga0070699_100002265
178 Ga0070699_100546248
179 Ga0070695_101261719
180 Ga0070696_100397188
181 Ga0070696_100886445
182 Ga0070704_100634642
183 Ga0070704_100860674
184 Ga0068859_100049456
185 Ga0068864_101247698
186 Ga0068870_10167398
187 Ga0068862_100020773
188 Ga0068862_100234566
189 Ga0081539_10005847
190 Ga0081539_10020267
191 Ga0075427_10000618
192 Ga0075428_100030368
193 Ga0075428_100177305
194 Ga0075428_100371191
195 Ga0075428_100471713
196 Ga0075428_101435588
197 Ga0075430_100108685
198 Ga0075430_100570575
199 Ga0075430_100587109
200 Ga0075431_100024710
201 Ga0075431_101041512
202 Ga0075433_10371397
203 Ga0075433_10404066
204 Ga0075434_100028420
205 Ga0075429_100005699
206 Ga0075429_100028463
207 Ga0075429_100056244
208 Ga0075429_100123221
209 Ga0097620_100049455
210 Ga0111539_10242221
211 Ga0114129_10000874
212 Ga0114129_10005535
213 Ga0114129_10038307
214 Ga0114129_10042232
215 Ga0114129_11098848
216 Ga0114129_12211882
217 Ga0105243_10107362
218 Ga0105243_10159631
219 Ga0105243_10402557
220 Ga0105242_10295731
221 Ga0105249_10241485
222 Ga0105249_12197112
223 Ga0105246_10110001
224 Ga0157380_10190142
225 Ga0157379_10160923
226 Ga0207653_10133453
227 Ga0207684_10181027
228 Ga0207709_10131774
229 Ga0207709_10459406
230 Ga0207670_10265608
231 Ga0207670_10708758
232 Ga0207712_10471752
233 Ga0207708_10886726
234 Ga0207676_10045617
235 Ga0207676_10215620
236 Ga0268265_10030051
237 Ga0268265_10469297
238 Ga0265326_10030220
239 Ga0265318_10008872
240 Ga0265338_10013771
241 Ga0265324_10063336
242 Ga0265320_10005146
243 Ga0265331_10019479
244 Ga0265316_10536147
245 Ga0307405_10471941
246 Ga0307413_10068856
247 Ga0307410_10555535
248 Ga0307416_100330552
249 Ga0316574_0207191
250 Ga0451577_0007157
251 Ga0451577_0076097
252 Ga0451577_0960628
253 Ga0451577_1156481
254 Ga0453683_0013879
255 Ga0453683_0051264
256 Ga0453683_0337995
257 Ga0453683_0339309
258 Ga0453683_0426628
259 Ga0453683_0659463
260 Ga0453684_0001179
261 Ga0453684_0002406
262 Ga0453684_0002864
263 Ga0453684_0044311
264 Ga0453684_0053965
265 Ga0453684_0061151
266 Ga0453684_0062642
267 Ga0453684_0087111
268 Ga0453684_0093252
269 Ga0453684_0116389
270 Ga0453684_0154258
271 Ga0453684_0196043
272 Ga0453684_0208209
273 Ga0453684_0209819
274 Ga0453684_0259137
275 Ga0453684_0545890
276 Ga0453684_0660810
277 Ga0453684_1097257
278 Ga0453684_1187317
279 Ga0453684_1653894
280 Ga0453684_1985919
281 Ga0451576_0006697
282 Ga0451576_0043387
283 Ga0451576_0100820
284 Ga0451576_0152996
285 Ga0451576_0271960
286 Ga0451576_0308111
287 Ga0451576_0522943
288 Ga0501299_043834
289 Ga0501041_0356188
290 Ga0501072_1519994
291 Ga0501075_0145735
292 Ga0501075_0467504
293 Ga0501076_0248318
294 Ga0501080_0212454
295 Ga0501080_1314977
296 Ga0501081_0438412
297 Ga0501081_0658870
298 Ga0501081_0701207
299 nmdc:mga05p37_1093364_c1
300 nmdc:mga05p37_211186_c1
301 nmdc:mga05p37_314860_c1
302 nmdc:mga05p37_349365_c1
303 nmdc:mga05p37_3822_c1
304 nmdc:mga05p37_89656_c1
305 nmdc:mga09592_10404_c1
306 nmdc:mga09592_117775_c1
307 nmdc:mga09592_4099_c1
308 nmdc:mga09592_52606_c1
309 nmdc:mga0n895_53270_c1
310 nmdc:mga0a205_12977_c1
311 nmdc:mga0a205_237971_c1
312 Ga0501084_0148081
313 Ga0501082_0161249
314 Ga0501082_1011631

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04073

tRNA_edit

Aminoacyl-tRNA editing domain

30

161

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.9185 7 158
1wdv-assembly2.cif.gz_B crystal structure of hypothetical protein ape2540 0.907 7 158
1dbx-assembly2.cif.gz_B crystal structure of cysteinyl-trna(pro) deacylase from h. influenzae (hi1434) 0.8849 9 158
2dxa-assembly1.cif.gz_A crystal structure of trans editing enzyme prox from e.coli 0.8796 9 159
5znk-assembly1.cif.gz_A crystal structure of a bacterial prors with ligands 0.871 18 158
ID Description Score Start End Superfamily
af_P64483_2_166_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9708 2 158 3.90.960.10
af_P64483_2_166_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9471 2 158 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.9247 7 158 3.90.960.10
1wdvB00 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.913 7 158 3.90.960.10
af_Q2G0A0_1_158_3.90.960.10 Alpha Beta;Alpha-Beta Complex;YbaK protein;YbaK/aminoacyl-tRNA synthetase-associated domain 0.8819 10 156 3.90.960.10
ID Description Score Start End GO Terms
AF-A0A7C4YPY6-F1-model_v4 YbaK/prolyl-tRNA synthetase associated domain-containing protein 0.9911 1 160 GO:0002161
GO:0004812
AF-A0A1I3RNP0-F1-model_v4 Ala-tRNA(Pro) deacylase 0.9877 5 158 GO:0002161
AF-A0A1C4S3J6-F1-model_v4 Ala-tRNA(Pro) deacylase 0.9864 3 158 GO:0002161
AF-A0A0T1SQS9-F1-model_v4 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 0.9861 4 158 GO:0002161
AF-A0A7C4YPY6-F1-model_v4 YbaK/prolyl-tRNA synthetase associated domain-containing protein 0.9849 1 160 GO:0002161
GO:0004812

Map