F227234

General Info

Members Datasets Scaffolds Average Seq Length
157 90 314 315

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10048218|Ga0105239_100482186
Length 343
Sequence MANKANKVAINGFGRIGRLTLRAALQNPGVDLNVVAINDLTTPKQLAHLFKYDSNMGIYAGEVDFTENSLIIDGRTIRIFAEKDPASLPWKDLGVDVVIESTGFFTDGTKARKHIEAGAKKVIISAPAKNEDATLAIGINDHEYDAAKHHIISNASCTTNCLAPLGKVLQENFGIVSGLMTTIHSYTGDQRLLDAPHEDLRRARAAAQSMVPTSTGAAKAIGLVLPSLKGKLNGFAVRVPTPDVSLTDLTVITEKPVTVESVNEAFKRAADNELKHVLQYADAPLVSTDYMGNPHSCIFDSEFTQVSPGNLVKVLGWYDNEWGYSNRLAELTHMVAERLPVTA

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
14 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
20 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
21 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
22 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
39 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
40 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
41 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
42 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
43 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
44 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
45 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
52 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
53 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
58 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
59 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
60 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
61 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
62 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
63 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
64 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
70 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
84 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
85 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
86 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
90 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.17
Metatranscriptomes 17.2
Isolates 0.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 1.27
Rhizosphere 86.62
Stem 0
Stem Tuber 0
Unclassified 0.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10048218 3300010375 Bacteria 4671
2 Ga0068868_100089073 3300005338 Bacteria 2484
3 Ga0068853_100154479 3300005539 Bacteria 2067
4 Ga0070665_100009814 3300005548 Bacteria 9677
5 Ga0068855_100046357 3300005563 Bacteria 5139
6 Ga0068854_100017668 3300005578 Bacteria 4776
7 Ga0068856_100031091 3300005614 Bacteria 5222
8 Ga0068852_100024817 3300005616 Bacteria 4850
9 Ga0068858_100157654 3300005842 Bacteria 2136
10 Ga0068860_100000567 3300005843 Bacteria 44523
11 Ga0105240_10009783 3300009093 Bacteria 13538
12 Ga0114129_10815618 3300009147 Bacteria 1189
13 Ga0105241_10031251 3300009174 Bacteria 3987
14 Ga0105237_10036818 3300009545 Bacteria 4949
15 Ga0105238_10010747 3300009551 Bacteria 9194
16 Ga0105239_10029774 3300010375 Bacteria 6003
17 Ga0105239_10051772 3300010375 Bacteria 4500
18 Ga0157371_10002331 3300013102 Bacteria 18209
19 Ga0157374_10000291 3300013296 Bacteria 46237
20 Ga0157379_10004987 3300014968 Bacteria 11394
21 Ga0157376_10015796 3300014969 Bacteria 5712
22 Ga0206349_1364350 3300020075 Bacteria 1237
23 Ga0213875_10000276 3300021388 Bacteria 50734
24 Ga0224712_10097219 3300022467 Bacteria 1243
25 Ga0207647_10009991 3300025904 Bacteria 6719
26 Ga0207654_10016059 3300025911 Bacteria 3894
27 Ga0207695_10002678 3300025913 Bacteria 26007
28 Ga0207671_10001035 3300025914 Bacteria 33836
29 Ga0207652_10332336 3300025921 Bacteria 1372
30 Ga0207694_10001558 3300025924 Bacteria 19464
31 Ga0207667_10064797 3300025949 Bacteria 3813
32 Ga0207640_10082006 3300025981 Bacteria 2207
33 Ga0207639_10135533 3300026041 Bacteria 2044
34 Ga0207702_10086183 3300026078 Bacteria 2738
35 Ga0207641_10218255 3300026088 Bacteria 1767
36 Ga0207698_10014683 3300026142 Bacteria 5216
37 Ga0268266_10050338 3300028379 Bacteria 3574
38 Ga0268264_10000574 3300028381 Bacteria 44531
39 Ga0265338_10034602 3300028800 Bacteria 4878
40 Ga0265338_10199488 3300028800 Bacteria 1510
41 Ga0316575_10014625 3300031665 Bacteria 2949
42 Ga0316575_10043553 3300031665 Bacteria 1779
43 Ga0316575_10106424 3300031665 Bacteria 1142
44 Ga0316579_10011370 3300031691 Bacteria 3782
45 Ga0316579_10022064 3300031691 Bacteria 2844
46 Ga0316579_10022623 3300031691 Bacteria 2813
47 Ga0316579_10056520 3300031691 Bacteria 1842
48 Ga0316576_10004223 3300031727 Bacteria 8580
49 Ga0316576_10011121 3300031727 Bacteria 5880
50 Ga0316576_10027306 3300031727 Bacteria 4013
51 Ga0316576_10048964 3300031727 Bacteria 3067
52 Ga0316576_10061887 3300031727 Bacteria 2744
53 Ga0316576_10064377 3300031727 Bacteria 2693
54 Ga0316576_10109229 3300031727 Unclassified 2073
55 Ga0316576_10142184 3300031727 Bacteria 1807
56 Ga0316576_10152941 3300031727 Bacteria 1739
57 Ga0316578_10016327 3300031728 Bacteria 4015
58 Ga0316578_10031204 3300031728 Bacteria 3034
59 Ga0316578_10055668 3300031728 Bacteria 2321
60 Ga0316578_10058433 3300031728 Bacteria 2267
61 Ga0316577_10002293 3300031733 Bacteria 9436
62 Ga0316577_10037595 3300031733 Bacteria 2706
63 Ga0316577_10041747 3300031733 Bacteria 2567
64 Ga0316577_10078450 3300031733 Bacteria 1845
65 Ga0316577_10139544 3300031733 Bacteria 1365
66 Ga0316583_10011584 3300032133 Bacteria 3179
67 Ga0316583_10015386 3300032133 Bacteria 2753
68 Ga0316583_10033544 3300032133 Bacteria 1823
69 Ga0316585_10007848 3300032137 Bacteria 3086
70 Ga0316593_10003336 3300032168 Bacteria 3969
71 Ga0316593_10004847 3300032168 Bacteria 3498
72 Ga0316593_10006038 3300032168 Bacteria 3245
73 Ga0316593_10006253 3300032168 Bacteria 3204
74 Ga0316593_10007383 3300032168 Bacteria 3018
75 Ga0316593_10007419 3300032168 Bacteria 3013
76 Ga0316593_10007508 3300032168 Bacteria 2998
77 Ga0316593_10007885 3300032168 Bacteria 2944
78 Ga0316593_10016392 3300032168 Bacteria 2246
79 Ga0316593_10040624 3300032168 Bacteria 1546
80 Ga0316592_1001775 3300033524 Bacteria 3590
81 Ga0316592_1008696 3300033524 Bacteria 2015
82 Ga0316592_1026305 3300033524 Bacteria 1256
83 Ga0316586_1014337 3300033527 Bacteria 1251
84 Ga0316588_1001925 3300033528 Bacteria 3532
85 Ga0316587_1003414 3300033529 Bacteria 2224
86 Ga0316596_1006498 3300033541 Bacteria 2722
87 Ga0316596_1006869 3300033541 Bacteria 2665
88 Ga0316596_1007872 3300033541 Bacteria 2526
89 Ga0316596_1009002 3300033541 Bacteria 2391
90 Ga0316596_1009634 3300033541 Bacteria 2319
91 Ga0316596_1028249 3300033541 Bacteria 1449
92 Ga0316574_0003081 3300035398 Bacteria 8506
93 Ga0316574_0011936 3300035398 Bacteria 4954
94 Ga0316574_0017695 3300035398 Bacteria 4177
95 Ga0316574_0145823 3300035398 Bacteria 1526
96 Ga0316582_0006022 3300036647 Bacteria 6320
97 Ga0316582_0067208 3300036647 Bacteria 2312
98 Ga0316582_0080817 3300036647 Bacteria 2122
99 Ga0316582_0099745 3300036647 Bacteria 1922
100 Ga0316582_0253124 3300036647 Bacteria 1207
101 Ga0316584_0007528 3300036712 Bacteria 7459
102 Ga0316584_0052788 3300036712 Bacteria 3040
103 Ga0316584_0076391 3300036712 Bacteria 2510
104 Ga0316584_0108630 3300036712 Bacteria 2075
105 Ga0316584_0147201 3300036712 Bacteria 1754
106 Ga0316584_0159330 3300036712 Bacteria 1677
107 Ga0316584_0210374 3300036712 Bacteria 1432
108 Ga0316584_0304667 3300036712 Bacteria 1153
109 Ga0395905_0187526 3300037471 Bacteria 1941
110 Ga0316581_0028435 3300037588 Bacteria 1676
111 Ga0436364_0079644 3300037853 Bacteria 315114
112 Ga0400484_01810 3300038725 Bacteria 4299
113 Ga0400490_07389 3300038726 Bacteria 4728
114 Ga0400490_12789 3300038726 Bacteria 16595
115 Ga0400490_28737 3300038726 Bacteria 1561
116 Ga0400491_11884 3300038727 Bacteria 1329
117 Ga0400488_05645 3300038741 Bacteria 6137
118 Ga0400488_38836 3300038741 Bacteria 2493
119 Ga0400486_07680 3300038742 Bacteria 16080
120 Ga0400483_015382 3300039062 Bacteria 6511
121 Ga0400483_102013 3300039062 Bacteria 14111
122 Ga0400483_102510 3300039062 Bacteria 1044
123 Ga0400489_21972 3300039093 Bacteria 14035
124 Ga0400489_45329 3300039093 Bacteria 16258
125 Ga0400489_52417 3300039093 Bacteria 32559
126 Ga0400487_65511 3300039110 Bacteria 3488
127 Ga0451577_0068433 3300042876 Bacteria 3166
128 Ga0453683_0000903 3300044673 Bacteria 28448
129 Ga0453684_0002583 3300044712 Bacteria 43332
130 Ga0453684_0004048 3300044712 Bacteria 31861
131 Ga0453684_0017592 3300044712 Bacteria 11057
132 Ga0453684_0082320 3300044712 Bacteria 4010
133 Ga0453684_0189885 3300044712 Bacteria 2404
134 Ga0495630_0183502 3300046517 Bacteria 1596
135 Ga0495648_0028877 3300046524 Bacteria 3688
136 Ga0495622_0037296 3300046557 Bacteria 2265
137 Ga0496105_0047498 3300048908 Bacteria 3543
138 Ga0496109_0057461 3300048912 Bacteria 3551
139 Ga0501036_0061309 3300049572 Bacteria 3186
140 Ga0501036_0192629 3300049572 Bacteria 1715
141 Ga0501039_0090419 3300049575 Bacteria 2386
142 Ga0501040_0151280 3300049576 Bacteria 1637
143 Ga0501046_0231525 3300049580 Bacteria 1365
144 Ga0501071_0018951 3300049587 Bacteria 4774
145 Ga0501072_0023339 3300049588 Bacteria 4804
146 Ga0501074_0023384 3300049590 Bacteria 4494
147 Ga0501076_0036457 3300049592 Bacteria 3853
148 Ga0501081_0009444 3300049743 Bacteria 6357
149 nmdc:mga08y16_64441_c1 3300050511 Bacteria 3826
150 Ga0495619_0190766 3300053085 Bacteria 1418
151 Ga0500651_0000008 3300053093 Bacteria 287738
152 Ga0500608_017341 3300053122 Bacteria 3270
153 Ga0587066_002368 3300059490 Bacteria 2071
154 Ga0587091_003039 3300059511 Bacteria 2068
155 Ga0587107_004977 3300059652 Bacteria 1381
156 Ga0530510_0157718 3300061734 Bacteria 1678
157 2887444180 2887443736 Bacteria 4426037
158 Ga0105239_10048218
159 Ga0068868_100089073
160 Ga0068853_100154479
161 Ga0070665_100009814
162 Ga0068855_100046357
163 Ga0068854_100017668
164 Ga0068856_100031091
165 Ga0068852_100024817
166 Ga0068858_100157654
167 Ga0068860_100000567
168 Ga0105240_10009783
169 Ga0114129_10815618
170 Ga0105241_10031251
171 Ga0105237_10036818
172 Ga0105238_10010747
173 Ga0105239_10029774
174 Ga0105239_10051772
175 Ga0157371_10002331
176 Ga0157374_10000291
177 Ga0157379_10004987
178 Ga0157376_10015796
179 Ga0206349_1364350
180 Ga0213875_10000276
181 Ga0224712_10097219
182 Ga0207647_10009991
183 Ga0207654_10016059
184 Ga0207695_10002678
185 Ga0207671_10001035
186 Ga0207652_10332336
187 Ga0207694_10001558
188 Ga0207667_10064797
189 Ga0207640_10082006
190 Ga0207639_10135533
191 Ga0207702_10086183
192 Ga0207641_10218255
193 Ga0207698_10014683
194 Ga0268266_10050338
195 Ga0268264_10000574
196 Ga0265338_10034602
197 Ga0265338_10199488
198 Ga0316575_10014625
199 Ga0316575_10043553
200 Ga0316575_10106424
201 Ga0316579_10011370
202 Ga0316579_10022064
203 Ga0316579_10022623
204 Ga0316579_10056520
205 Ga0316576_10004223
206 Ga0316576_10011121
207 Ga0316576_10027306
208 Ga0316576_10048964
209 Ga0316576_10061887
210 Ga0316576_10064377
211 Ga0316576_10109229
212 Ga0316576_10142184
213 Ga0316576_10152941
214 Ga0316578_10016327
215 Ga0316578_10031204
216 Ga0316578_10055668
217 Ga0316578_10058433
218 Ga0316577_10002293
219 Ga0316577_10037595
220 Ga0316577_10041747
221 Ga0316577_10078450
222 Ga0316577_10139544
223 Ga0316583_10011584
224 Ga0316583_10015386
225 Ga0316583_10033544
226 Ga0316585_10007848
227 Ga0316593_10003336
228 Ga0316593_10004847
229 Ga0316593_10006038
230 Ga0316593_10006253
231 Ga0316593_10007383
232 Ga0316593_10007419
233 Ga0316593_10007508
234 Ga0316593_10007885
235 Ga0316593_10016392
236 Ga0316593_10040624
237 Ga0316592_1001775
238 Ga0316592_1008696
239 Ga0316592_1026305
240 Ga0316586_1014337
241 Ga0316588_1001925
242 Ga0316587_1003414
243 Ga0316596_1006498
244 Ga0316596_1006869
245 Ga0316596_1007872
246 Ga0316596_1009002
247 Ga0316596_1009634
248 Ga0316596_1028249
249 Ga0316574_0003081
250 Ga0316574_0011936
251 Ga0316574_0017695
252 Ga0316574_0145823
253 Ga0316582_0006022
254 Ga0316582_0067208
255 Ga0316582_0080817
256 Ga0316582_0099745
257 Ga0316582_0253124
258 Ga0316584_0007528
259 Ga0316584_0052788
260 Ga0316584_0076391
261 Ga0316584_0108630
262 Ga0316584_0147201
263 Ga0316584_0159330
264 Ga0316584_0210374
265 Ga0316584_0304667
266 Ga0395905_0187526
267 Ga0316581_0028435
268 Ga0436364_0079644
269 Ga0400484_01810
270 Ga0400490_07389
271 Ga0400490_12789
272 Ga0400490_28737
273 Ga0400491_11884
274 Ga0400488_05645
275 Ga0400488_38836
276 Ga0400486_07680
277 Ga0400483_015382
278 Ga0400483_102013
279 Ga0400483_102510
280 Ga0400489_21972
281 Ga0400489_45329
282 Ga0400489_52417
283 Ga0400487_65511
284 Ga0451577_0068433
285 Ga0453683_0000903
286 Ga0453684_0002583
287 Ga0453684_0004048
288 Ga0453684_0017592
289 Ga0453684_0082320
290 Ga0453684_0189885
291 Ga0495630_0183502
292 Ga0495648_0028877
293 Ga0495622_0037296
294 Ga0496105_0047498
295 Ga0496109_0057461
296 Ga0501036_0061309
297 Ga0501036_0192629
298 Ga0501039_0090419
299 Ga0501040_0151280
300 Ga0501046_0231525
301 Ga0501071_0018951
302 Ga0501072_0023339
303 Ga0501074_0023384
304 Ga0501076_0036457
305 Ga0501081_0009444
306 nmdc:mga08y16_64441_c1
307 Ga0495619_0190766
308 Ga0500651_0000008
309 Ga0500608_017341
310 Ga0587066_002368
311 Ga0587091_003039
312 Ga0587107_004977
313 Ga0530510_0157718
314 2887444180

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02800

Gp_dh_C

Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

162

318

0.99

PF00044

Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

6

108

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dib-assembly1.cif.gz_E the crystal structure of glyceraldehyde-3-phosphate dehydrogenase from bacillus anthracis str. sterne 0.9809 3 339
3dbv-assembly1.cif.gz_O glyceraldehyde-3-phosphate dehydrogenase mutant with leu 33 replaced by thr, thr 34 replaced by gly, asp 36 replaced by gly, leu 187 replaced by ala, and pro 188 replaced by ser complexed with nad+ 0.9793 3 339
1npt-assembly1.cif.gz_Q glyceraldehyde-3-phosphate dehydrogenase mutant with cys 149 replaced by ala complexed with nad+ 0.9793 3 339
4dib-assembly2.cif.gz_C the crystal structure of glyceraldehyde-3-phosphate dehydrogenase from bacillus anthracis str. sterne 0.9793 3 339
1nq5-assembly2.cif.gz_C glyceraldehyde-3-phosphate dehydrogenase mutant with cys 149 replaced by ser complexed with nad+ 0.979 3 339
ID Description Score Start End Superfamily
1hdgO01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9811 3 152 3.40.50.720
af_Q2G032_1_148_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.981 1 152 3.40.50.720
4dibE02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9785 154 321 3.30.360.10
af_P0A9B6_1_155_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9768 1 155 3.30.360.10
af_Q2G032_1_148_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9745 1 152 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A239P280-F1-model_v4 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 78 172 GO:0006096
GO:0016620
GO:0051287
AF-B1HWD4-F1-model_v4 Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 0.997 238 338 GO:0004365
AF-A0A447LQF7-F1-model_v4 deleted 0.9941 244 339
AF-H5SC17-F1-model_v4 Glyceraldehyde-3-phosphate dehydrogenase 0.9907 1 81 GO:0016620
GO:0051287
AF-A0A7V9TZP0-F1-model_v4 Type I glyceraldehyde-3-phosphate dehydrogenase 0.9898 230 339 GO:0016620

Map