F226725

General Info

Members Datasets Scaffolds Average Seq Length
157 102 314 451

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100032566|Ga0070707_1000325665
Length 493
Sequence MPGPNIGAQTYPSLGYQRVQRHDHPTSRRSTGEALAMRLQFDRGTIVLTDPPKDLDLAEAPGVLWDPRVHVYRAPASKYPALKRWLLQSRTGFQDIPEPVSPTQELWSEVDLRPYQEAALSAWELGQRRGVVALPTGSGKTRLALAAMHRTRLSALCLVPTRVLLDQWLREIGALYRGPVGCYGDGVRRWAPLTIATFESAYRHMDQLGDRFELVIVDEVHHFGGGLRDETLEMTIAVARLGLTATPTRDPGVTARLAELVGATVFELAIADLAGGFLASFDSITLYLDLTPEERRAYTSLAALFTSAHAEFRRLAPDGSWADFTHHAARTPEGRRALSAWRQMRRLLAFTHAKRRALESLLVRHRHSRVLIFTADNETAYAIAREHLVMPLTCDISRPERDDVLERFRNGDLRTLVSARVLNEGLDVPDADVAVVVGGALGEREHVQRVGRLLRPSEGKRAAVYELVTRNTIEVGQARRRRQGLVIRRSAQL

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
17 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
21 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
36 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
40 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
43 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
46 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
47 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
59 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
65 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
66 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
67 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
68 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
82 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
99 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.27
Rhizosphere 91.72
Stem 0
Stem Tuber 0
Unclassified 17.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100032566 3300005468 Bacteria 4967
2 rootH1_10107281 3300003323 Bacteria 7646
3 rootH1_10127385 3300003323 Bacteria 4691
4 rootH1_10177892 3300003323 Bacteria 5078
5 rootH1_10300484 3300003323 Bacteria 4104
6 rootH1_10338511 3300003323 Bacteria 1780
7 Ga0070668_100006089 3300005347 Bacteria 8946
8 Ga0070674_100001533 3300005356 Bacteria 12333
9 Ga0070700_100006222 3300005441 Bacteria 6364
10 Ga0070708_100149698 3300005445 Bacteria 2170
11 Ga0070707_100046269 3300005468 Bacteria 4164
12 Ga0070699_100014508 3300005518 Bacteria 6776
13 Ga0070672_100000551 3300005543 Bacteria 22022
14 Ga0070672_100015603 3300005543 Bacteria 5416
15 Ga0070686_100002746 3300005544 Bacteria 9690
16 Ga0070665_100226211 3300005548 Bacteria 1871
17 Ga0070704_100080356 3300005549 Bacteria 2398
18 Ga0068855_100000053 3300005563 Bacteria 139838
19 Ga0068859_100030673 3300005617 Bacteria 5395
20 Ga0068861_100079964 3300005719 Bacteria 2556
21 Ga0081455_10001495 3300005937 Bacteria 28902
22 Ga0075433_10133982 3300006852 Bacteria 2202
23 Ga0075434_100038666 3300006871 Bacteria 4726
24 Ga0068865_100026704 3300006881 Bacteria 3809
25 Ga0097620_100030671 3300006931 Bacteria 5395
26 Ga0075435_100002986 3300007076 Bacteria 11380
27 Ga0075435_100011689 3300007076 Bacteria 6472
28 Ga0075435_100146238 3300007076 Bacteria 1985
29 Ga0099794_10011037 3300007265 Bacteria 3859
30 Ga0111539_10002067 3300009094 Bacteria 26837
31 Ga0111539_10002348 3300009094 Bacteria 25190
32 Ga0114129_10022552 3300009147 Bacteria 8932
33 Ga0114129_10073762 3300009147 Bacteria 4754
34 Ga0207645_10016183 3300025907 Bacteria 4941
35 Ga0207684_10011709 3300025910 Bacteria 7653
36 Ga0207684_10040798 3300025910 Bacteria 3935
37 Ga0207646_10015287 3300025922 Bacteria 7258
38 Ga0207646_10078458 3300025922 Bacteria 2952
39 Ga0207681_10003804 3300025923 Bacteria 9361
40 Ga0207669_10002461 3300025937 Bacteria 7901
41 Ga0207704_10019747 3300025938 Bacteria 3547
42 Ga0207691_10001852 3300025940 Bacteria 20656
43 Ga0207691_10010094 3300025940 Bacteria 9061
44 Ga0207667_10000698 3300025949 Bacteria 43531
45 Ga0207708_10004890 3300026075 Bacteria 9884
46 Ga0207675_100013908 3300026118 Bacteria 7503
47 Ga0207675_100138822 3300026118 Bacteria 2308
48 Ga0207683_10186554 3300026121 Bacteria 1882
49 Ga0207428_10020190 3300027907 Bacteria 5664
50 Ga0207428_10026540 3300027907 Bacteria 4835
51 Ga0268266_10184377 3300028379 Bacteria 1902
52 Ga0268265_10101550 3300028380 Bacteria 2324
53 Ga0265337_1029312 3300028556 Unclassified 1646
54 Ga0265323_10007063 3300028653 Bacteria 4689
55 Ga0265323_10008470 3300028653 Bacteria 4239
56 Ga0265336_10014930 3300028666 Unclassified 2564
57 Ga0265338_10053822 3300028800 Bacteria 3596
58 Ga0265324_10000066 3300029957 Bacteria 88643
59 Ga0265330_10001299 3300031235 Bacteria 14613
60 Ga0265330_10003474 3300031235 Bacteria 8223
61 Ga0265330_10040516 3300031235 Unclassified 2069
62 Ga0265320_10006807 3300031240 Bacteria 7168
63 Ga0265325_10009830 3300031241 Bacteria 5568
64 Ga0265325_10029464 3300031241 Bacteria 2950
65 Ga0265329_10001517 3300031242 Bacteria 11110
66 Ga0265339_10000057 3300031249 Bacteria 98767
67 Ga0265339_10003981 3300031249 Bacteria 10205
68 Ga0265331_10010518 3300031250 Bacteria 5117
69 Ga0265316_10000265 3300031344 Bacteria 59393
70 Ga0265316_10045717 3300031344 Bacteria 3474
71 Ga0307509_10048210 3300031507 Unclassified 4577
72 Ga0265313_10004198 3300031595 Bacteria 11181
73 Ga0307508_10049672 3300031616 Bacteria 3736
74 Ga0316579_10060098 3300031691 Unclassified 1787
75 Ga0265314_10000329 3300031711 Bacteria 66603
76 Ga0265314_10001553 3300031711 Bacteria 25296
77 Ga0265314_10094866 3300031711 Unclassified 1933
78 Ga0265342_10000372 3300031712 Bacteria 49419
79 Ga0265342_10002197 3300031712 Bacteria 17158
80 Ga0265342_10002442 3300031712 Bacteria 16046
81 Ga0265342_10005411 3300031712 Bacteria 9748
82 Ga0265342_10005645 3300031712 Bacteria 9469
83 Ga0265342_10067561 3300031712 Unclassified 2091
84 Ga0316576_10026854 3300031727 Unclassified 4044
85 Ga0307516_10001215 3300031730 Bacteria 35867
86 Ga0373950_0000009 3300034818 Bacteria 379994
87 Ga0373943_0022576 3300035170 Archaea 2918
88 Ga0316584_0024721 3300036712 Bacteria 4399
89 Ga0395900_0047632 3300037418 Bacteria 4414
90 Ga0395898_0045616 3300037466 Bacteria 4308
91 Ga0395901_0048412 3300038443 Bacteria 4414
92 Ga0451797_0603113 3300041453 Archaea 1911
93 Ga0451807_0246973 3300041486 Bacteria 10567
94 Ga0451849_0183901 3300041505 Bacteria 9267
95 Ga0451851_1112629 3300041507 Bacteria 2764
96 Ga0451853_0999592 3300041512 Unclassified 4281
97 Ga0451577_0012190 3300042876 Bacteria 8083
98 Ga0451577_0236002 3300042876 Bacteria 1654
99 Ga0453683_0018797 3300044673 Bacteria 4433
100 Ga0453684_0000248 3300044712 Bacteria 232277
101 Ga0453684_0000729 3300044712 Bacteria 115611
102 Ga0453684_0040004 3300044712 Bacteria 6375
103 Ga0453684_0053799 3300044712 Bacteria 5251
104 Ga0453684_0054260 3300044712 Archaea 5223
105 Ga0453684_0055849 3300044712 Bacteria 5129
106 Ga0453684_0090318 3300044712 Bacteria 3785
107 Ga0451576_0057670 3300045051 Bacteria 4059
108 Ga0451576_0125891 3300045051 Bacteria 2670
109 Ga0466967_0062698 3300045976 Unclassified 3301
110 Ga0501033_0086565 3300049570 Unclassified 2294
111 Ga0501038_0039966 3300049574 Bacteria 4100
112 Ga0501039_0006669 3300049575 Bacteria 8774
113 Ga0501040_0019357 3300049576 Unclassified 4527
114 Ga0501040_0030159 3300049576 Unclassified 3662
115 Ga0501041_0043001 3300049577 Unclassified 2746
116 Ga0501042_0023467 3300049578 Bacteria 4317
117 Ga0501042_0143729 3300049578 Bacteria 1720
118 Ga0501048_0003771 3300049582 Bacteria 11567
119 Ga0501067_0000001 3300049583 Bacteria 194431
120 Ga0501068_0021111 3300049584 Unclassified 3801
121 Ga0501068_0099527 3300049584 Unclassified 1801
122 Ga0501071_0037911 3300049587 Unclassified 3443
123 Ga0501072_0005683 3300049588 Bacteria 9494
124 Ga0501072_0072899 3300049588 Unclassified 2714
125 Ga0501073_0003748 3300049589 Bacteria 11423
126 Ga0501075_0000532 3300049591 Bacteria 23069
127 Ga0501075_0002722 3300049591 Bacteria 11825
128 Ga0501076_0000016 3300049592 Bacteria 94865
129 Ga0501076_0029836 3300049592 Bacteria 4243
130 Ga0501076_0070840 3300049592 Unclassified 2788
131 Ga0501077_0044063 3300049593 Unclassified 2835
132 Ga0501079_0002735 3300049741 Bacteria 12849
133 Ga0501080_0004129 3300049742 Bacteria 12869
134 Ga0501080_0034179 3300049742 Bacteria 4745
135 Ga0501081_0000984 3300049743 Bacteria 16954
136 Ga0501081_0017558 3300049743 Bacteria 4739
137 Ga0501035_0154129 3300049822 Unclassified 1992
138 Ga0501045_0003644 3300049824 Bacteria 10590
139 Ga0501045_0184278 3300049824 Unclassified 1555
140 nmdc:mga05p37_59811_c1 3300050507 Bacteria 4692
141 nmdc:mga09592_246332_c1 3300050508 Bacteria 1549
142 nmdc:mga08y16_36931_c1 3300050511 Bacteria 5131
143 nmdc:mga08y16_43272_c1 3300050511 Bacteria 4719
144 nmdc:mga08y16_4444_c1 3300050511 Bacteria 14660
145 nmdc:mga0n895_256838_c1 3300050512 Unclassified 1773
146 nmdc:mga0n895_47097_c1 3300050512 Bacteria 4215
147 nmdc:mga0rr50_35462_c1 3300050513 Bacteria 3583
148 nmdc:mga0a205_157619_c1 3300050515 Bacteria 2168
149 nmdc:mga0a205_20200_c1 3300050515 Bacteria 6283
150 Ga0501084_0014530 3300054114 Bacteria 6527
151 Ga0501084_0145965 3300054114 Bacteria 1993
152 Ga0501082_0068233 3300060353 Unclassified 3062
153 Ga0501082_0196141 3300060353 Unclassified 1756
154 Ga0530510_0006629 3300061734 Bacteria 8073
155 Ga0530510_0039319 3300061734 Bacteria 3414
156 Ga0530510_0085595 3300061734 Unclassified 2296
157 Ga0530510_0167255 3300061734 Unclassified 1628
158 Ga0070707_100032566
159 rootH1_10107281
160 rootH1_10127385
161 rootH1_10177892
162 rootH1_10300484
163 rootH1_10338511
164 Ga0070668_100006089
165 Ga0070674_100001533
166 Ga0070700_100006222
167 Ga0070708_100149698
168 Ga0070707_100046269
169 Ga0070699_100014508
170 Ga0070672_100000551
171 Ga0070672_100015603
172 Ga0070686_100002746
173 Ga0070665_100226211
174 Ga0070704_100080356
175 Ga0068855_100000053
176 Ga0068859_100030673
177 Ga0068861_100079964
178 Ga0081455_10001495
179 Ga0075433_10133982
180 Ga0075434_100038666
181 Ga0068865_100026704
182 Ga0097620_100030671
183 Ga0075435_100002986
184 Ga0075435_100011689
185 Ga0075435_100146238
186 Ga0099794_10011037
187 Ga0111539_10002067
188 Ga0111539_10002348
189 Ga0114129_10022552
190 Ga0114129_10073762
191 Ga0207645_10016183
192 Ga0207684_10011709
193 Ga0207684_10040798
194 Ga0207646_10015287
195 Ga0207646_10078458
196 Ga0207681_10003804
197 Ga0207669_10002461
198 Ga0207704_10019747
199 Ga0207691_10001852
200 Ga0207691_10010094
201 Ga0207667_10000698
202 Ga0207708_10004890
203 Ga0207675_100013908
204 Ga0207675_100138822
205 Ga0207683_10186554
206 Ga0207428_10020190
207 Ga0207428_10026540
208 Ga0268266_10184377
209 Ga0268265_10101550
210 Ga0265337_1029312
211 Ga0265323_10007063
212 Ga0265323_10008470
213 Ga0265336_10014930
214 Ga0265338_10053822
215 Ga0265324_10000066
216 Ga0265330_10001299
217 Ga0265330_10003474
218 Ga0265330_10040516
219 Ga0265320_10006807
220 Ga0265325_10009830
221 Ga0265325_10029464
222 Ga0265329_10001517
223 Ga0265339_10000057
224 Ga0265339_10003981
225 Ga0265331_10010518
226 Ga0265316_10000265
227 Ga0265316_10045717
228 Ga0307509_10048210
229 Ga0265313_10004198
230 Ga0307508_10049672
231 Ga0316579_10060098
232 Ga0265314_10000329
233 Ga0265314_10001553
234 Ga0265314_10094866
235 Ga0265342_10000372
236 Ga0265342_10002197
237 Ga0265342_10002442
238 Ga0265342_10005411
239 Ga0265342_10005645
240 Ga0265342_10067561
241 Ga0316576_10026854
242 Ga0307516_10001215
243 Ga0373950_0000009
244 Ga0373943_0022576
245 Ga0316584_0024721
246 Ga0395900_0047632
247 Ga0395898_0045616
248 Ga0395901_0048412
249 Ga0451797_0603113
250 Ga0451807_0246973
251 Ga0451849_0183901
252 Ga0451851_1112629
253 Ga0451853_0999592
254 Ga0451577_0012190
255 Ga0451577_0236002
256 Ga0453683_0018797
257 Ga0453684_0000248
258 Ga0453684_0000729
259 Ga0453684_0040004
260 Ga0453684_0053799
261 Ga0453684_0054260
262 Ga0453684_0055849
263 Ga0453684_0090318
264 Ga0451576_0057670
265 Ga0451576_0125891
266 Ga0466967_0062698
267 Ga0501033_0086565
268 Ga0501038_0039966
269 Ga0501039_0006669
270 Ga0501040_0019357
271 Ga0501040_0030159
272 Ga0501041_0043001
273 Ga0501042_0023467
274 Ga0501042_0143729
275 Ga0501048_0003771
276 Ga0501067_0000001
277 Ga0501068_0021111
278 Ga0501068_0099527
279 Ga0501071_0037911
280 Ga0501072_0005683
281 Ga0501072_0072899
282 Ga0501073_0003748
283 Ga0501075_0000532
284 Ga0501075_0002722
285 Ga0501076_0000016
286 Ga0501076_0029836
287 Ga0501076_0070840
288 Ga0501077_0044063
289 Ga0501079_0002735
290 Ga0501080_0004129
291 Ga0501080_0034179
292 Ga0501081_0000984
293 Ga0501081_0017558
294 Ga0501035_0154129
295 Ga0501045_0003644
296 Ga0501045_0184278
297 nmdc:mga05p37_59811_c1
298 nmdc:mga09592_246332_c1
299 nmdc:mga08y16_36931_c1
300 nmdc:mga08y16_43272_c1
301 nmdc:mga08y16_4444_c1
302 nmdc:mga0n895_256838_c1
303 nmdc:mga0n895_47097_c1
304 nmdc:mga0rr50_35462_c1
305 nmdc:mga0a205_157619_c1
306 nmdc:mga0a205_20200_c1
307 Ga0501084_0014530
308 Ga0501084_0145965
309 Ga0501082_0068233
310 Ga0501082_0196141
311 Ga0530510_0006629
312 Ga0530510_0039319
313 Ga0530510_0085595
314 Ga0530510_0167255

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00271

Helicase_C

Helicase conserved C-terminal domain

353

457

0.94

PF18458

XPB_DRD

Xeroderma pigmentosum group B helicase damage recognition domain

39

96

0.94

PF04851

ResIII

Type III restriction enzyme, res subunit

109

249

0.9

PF00270

DEAD

DEAD/DEAH box helicase

113

252

0.84

PF16203

ERCC3_RAD25_C

ERCC3/RAD25/XPB C-terminal helicase

335

490

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gfp-assembly1.cif.gz_A structure of the c-terminal domain of the dead-box protein dbp5 0.8695 314 439
2yjt-assembly1.cif.gz_D crystal structure of e. coli dead-box protein srmb bound to regulator of ribonuclease activity a (rraa) 0.8633 314 428
2fzl-assembly1.cif.gz_A structure of c-terminal domain of archaeoglobus fulgidus xpb 0.8513 237 428
4ern-assembly1.cif.gz_A crystal structure of the c-terminal domain of human xpb/ercc-3 excision repair protein at 1.80 a 0.8404 238 439
3eas-assembly1.cif.gz_B novel dimerization motif in the dead box rna helicase hera: form 1, complete dimer, asymmetric 0.8397 314 444
ID Description Score Start End Superfamily
af_A0A0P0XCD9_496_590_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.933 313 378 3.40.50.300
af_K7MUR9_1_82_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9017 306 378 3.40.50.300
af_Q00578_544_774_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8829 236 439 3.40.50.300
2fwrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8825 69 235 3.40.50.300
af_Q54CD6_430_607_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.881 314 428 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V9KIT0-F1-model_v4 Helicase 0.9568 10 445 GO:0003677
GO:0004386
GO:0005524
GO:0016787
AF-A0A7V8YDR1-F1-model_v4 ATP-dependent helicase 0.9541 195 438 GO:0004386
AF-A0A7Y5E317-F1-model_v4 DEAD/DEAH box helicase 0.9382 9 439 GO:0003677
GO:0004386
GO:0005524
GO:0016787
AF-A0A2V9KIT0-F1-model_v4 Helicase 0.9338 10 445 GO:0003677
GO:0004386
GO:0005524
GO:0016787
AF-A0A662TY11-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.9299 120 439 GO:0003677
GO:0005524
GO:0009378
GO:0016787
GO:0016853
GO:0036121
GO:0061749
GO:1990518

Map