F226054

General Info

Members Datasets Scaffolds Average Seq Length
156 129 312 434

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606365|2808871736
Length 506
Sequence AAGPAPALGPLAGGPGKPVEGLSGACGTMAGMTTRGGIREFWAQLPTEGRWLLSTVAVQTLGRGLTLPFTVIYLHEVRGIELGLSGLLMSLIAVFALAVTGPGGSLTDRLGARVMLLLATTAQLVGCVVLAFATTPLTVALAFLFLGFNFGISWPAFNALIAAVVDGSARQQYFGINFALVNLGIGVGGVVGGIVVDVDRPATFTAIFLADAVSMLVPIALLLGPLRHVHGRADAPEQASGEPGSYLAILRRPEVLWLTLLTFVATFVGYGQMEAGMPAFARGVAGVSTEVIGFAFAINTAVIVGLQFLVLGRISGKRRTRVFMVMSGLWAVSWLALGVGGLVPGSVAAGAAVLTFMSLFALGETMLQPTIPAITNDLAPDHLRGRYNAISAGAFQGGTILGPVVAGVLLQHRLAGVYIALLVGGCLGMVWLARLLEQRITPAVNGLHREAELPEATGAPARSAAPAPVTEPVTEPVTEPVTEPVTEPGIESLAEASAVHHQTPLT

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
7 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
16 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
17 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
18 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
25 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
26 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
27 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
28 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
29 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
30 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
31 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
34 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
37 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
38 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
39 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
40 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
41 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
42 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
43 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
44 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
45 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
46 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
47 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
48 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
49 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
50 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
51 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
66 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
67 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
68 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
69 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
70 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
71 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
72 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
73 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
74 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
75 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
84 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
88 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
89 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
90 2643221549 Agromyces sp. Root1464 Isolate Unclassified
91 2643221561 Nocardioides sp. Root151 Isolate Unclassified
92 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
93 2643221572 Leifsonia sp. Root60 Isolate Unclassified
94 2643221576 Nocardioides sp. Root614 Isolate Unclassified
95 2643221590 Nocardioides sp. Root682 Isolate Unclassified
96 2643221604 Nocardioides sp. Root190 Isolate Unclassified
97 2643221617 Nocardioides sp. Root79 Isolate Unclassified
98 2643221619 Agromyces sp. Root81 Isolate Unclassified
99 2643221620 Nocardioides sp. Root240 Isolate Unclassified
100 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
101 2643221630 Microbacterium sp. Root322 Isolate Unclassified
102 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
103 2643221696 Nocardioides sp. Root140 Isolate Unclassified
104 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
105 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
106 2738541305 Nocardioides sp. CF167 Isolate Unclassified
107 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
108 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
109 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
110 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
111 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
112 2808606372 Agromyces sp. 23-23 Isolate Unclassified
113 2808606394 Promicromonospora sp. C35 Isolate Unclassified
114 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
115 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
116 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
117 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
118 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
119 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
120 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
121 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
122 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
123 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
124 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
125 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
126 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
127 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
128 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
129 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.08
Metatranscriptomes 0
Isolates 26.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.92
Nodule 0
Rhizoplane 3.21
Rhizosphere 71.79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10014816 3300001979 Bacteria 2864
2 JGI25154J39366_1001181 3300002738 Bacteria 9987
3 Ga0070675_100072055 3300005354 Bacteria 2868
4 Ga0070700_100012149 3300005441 Bacteria 4795
5 Ga0070663_100133986 3300005455 Bacteria 1885
6 Ga0068857_100062823 3300005577 Bacteria 3301
7 Ga0068861_100043125 3300005719 Bacteria 3384
8 Ga0081455_10000397 3300005937 Bacteria 57358
9 Ga0081538_10000036 3300005981 Bacteria 119944
10 Ga0075365_10042204 3300006038 Bacteria 2981
11 Ga0075428_100000373 3300006844 Bacteria 44416
12 Ga0075431_100005251 3300006847 Bacteria 12756
13 Ga0075429_100002265 3300006880 Bacteria 16132
14 Ga0111539_10015514 3300009094 Bacteria 9472
15 Ga0157380_10057967 3300014326 Bacteria 3086
16 Ga0157380_10299347 3300014326 Bacteria 1481
17 Ga0163161_10115172 3300017792 Bacteria 2014
18 Ga0209646_1000168 3300025246 Bacteria 86352
19 Ga0207688_10013848 3300025901 Bacteria 4384
20 Ga0207678_10162003 3300026067 Bacteria 1910
21 Ga0207708_10049258 3300026075 Bacteria 3207
22 Ga0207674_10130902 3300026116 Bacteria 2472
23 Ga0207675_100071033 3300026118 Bacteria 3254
24 Ga0207683_10029382 3300026121 Bacteria 4759
25 Ga0314311_1123238 3300030733 Bacteria 2106
26 Ga0307405_10075039 3300031731 Bacteria 2189
27 Ga0307410_10083235 3300031852 Bacteria 2253
28 Ga0307406_10001639 3300031901 Bacteria 12304
29 Ga0307407_10024653 3300031903 Bacteria 3158
30 Ga0307409_100007935 3300031995 Bacteria 6395
31 Ga0307409_100104550 3300031995 Bacteria 2359
32 Ga0307416_100032213 3300032002 Bacteria 3958
33 Ga0307414_10135295 3300032004 Bacteria 1921
34 Ga0395900_0216969 3300037418 Bacteria 1930
35 Ga0395898_0005536 3300037466 Bacteria 13627
36 Ga0395898_0015656 3300037466 Bacteria 7772
37 Ga0395901_0015851 3300038443 Bacteria 7680
38 Ga0395901_0089760 3300038443 Bacteria 3216
39 Ga0395901_0125693 3300038443 Bacteria 2695
40 Ga0466972_0050067 3300044658 Bacteria 2017
41 Ga0466965_0020728 3300044683 Bacteria 3162
42 Ga0466965_0033165 3300044683 Bacteria 2523
43 Ga0466961_0115430 3300044693 Bacteria 1688
44 Ga0466970_0000552 3300044765 Bacteria 18303
45 Ga0466970_0068362 3300044765 Bacteria 1908
46 Ga0466960_0005626 3300044901 Bacteria 4973
47 Ga0495590_0000119 3300046457 Bacteria 47435
48 Ga0495629_0108842 3300046459 Bacteria 1933
49 Ga0495638_0016035 3300046460 Bacteria 5022
50 Ga0495641_0027549 3300046461 Bacteria 2762
51 Ga0495587_0099108 3300046536 Bacteria 1680
52 Ga0495656_0016697 3300046615 Bacteria 2789
53 Ga0495672_0051965 3300047320 Bacteria 2410
54 Ga0496102_0081898 3300048905 Bacteria 2976
55 Ga0496102_0117843 3300048905 Bacteria 2478
56 Ga0496103_0010630 3300048906 Bacteria 5446
57 Ga0496114_0013149 3300048917 Bacteria 6634
58 Ga0496114_0159289 3300048917 Bacteria 1961
59 Ga0496126_0115022 3300048929 Bacteria 2340
60 Ga0501031_0002139 3300049568 Bacteria 12461
61 Ga0501031_0097880 3300049568 Bacteria 1915
62 Ga0501032_0034320 3300049569 Bacteria 3474
63 Ga0501033_0019850 3300049570 Bacteria 5079
64 Ga0501034_0066323 3300049571 Bacteria 3622
65 Ga0501036_0005002 3300049572 Bacteria 10725
66 Ga0501036_0113045 3300049572 Bacteria 2295
67 Ga0501036_0172529 3300049572 Bacteria 1822
68 Ga0501037_0043717 3300049573 Bacteria 3292
69 Ga0501038_0021821 3300049574 Bacteria 5744
70 Ga0501038_0047220 3300049574 Bacteria 3730
71 Ga0501038_0074586 3300049574 Bacteria 2870
72 Ga0501039_0002088 3300049575 Bacteria 14808
73 Ga0501039_0009028 3300049575 Bacteria 7596
74 Ga0501039_0012876 3300049575 Bacteria 6396
75 Ga0501039_0081930 3300049575 Bacteria 2512
76 Ga0501040_0002930 3300049576 Bacteria 11036
77 Ga0501041_0006989 3300049577 Bacteria 6618
78 Ga0501041_0077395 3300049577 Bacteria 2046
79 Ga0501042_0004114 3300049578 Bacteria 9242
80 Ga0501042_0056013 3300049578 Bacteria 2813
81 Ga0501042_0077143 3300049578 Bacteria 2386
82 Ga0501043_0044484 3300049579 Bacteria 3491
83 Ga0501046_0008643 3300049580 Bacteria 8854
84 Ga0501048_0013871 3300049582 Bacteria 5976
85 Ga0501048_0015474 3300049582 Bacteria 5635
86 Ga0501067_0082173 3300049583 Bacteria 1786
87 Ga0501068_0004878 3300049584 Bacteria 7305
88 Ga0501069_0062570 3300049585 Bacteria 2078
89 Ga0501071_0007611 3300049587 Bacteria 7134
90 Ga0501072_0024975 3300049588 Bacteria 4652
91 Ga0501074_0041002 3300049590 Bacteria 3352
92 Ga0501075_0002633 3300049591 Bacteria 11988
93 Ga0501076_0003946 3300049592 Bacteria 10469
94 Ga0501079_0001018 3300049741 Bacteria 19459
95 Ga0501080_0052902 3300049742 Bacteria 3780
96 Ga0501080_0147916 3300049742 Bacteria 2172
97 Ga0501081_0006569 3300049743 Bacteria 7556
98 Ga0501035_0011092 3300049822 Bacteria 8345
99 Ga0501035_0120673 3300049822 Bacteria 2292
100 Ga0501045_0010839 3300049824 Bacteria 6390
101 nmdc:mga0yw44_46368_c1 3300050492 Bacteria 2609
102 nmdc:mga05p37_3068_c1 3300050507 Bacteria 19404
103 nmdc:mga09592_483_c1 3300050508 Bacteria 29797
104 nmdc:mga0qj67_76533_c1 3300050509 Bacteria 2676
105 nmdc:mga06r32_434_c1 3300050510 Bacteria 35341
106 nmdc:mga06r32_737_c1 3300050510 Bacteria 28697
107 nmdc:mga08y16_2764_c1 3300050511 Bacteria 17986
108 Ga0500568_0007035 3300053139 Bacteria 5562
109 Ga0501084_0005437 3300054114 Bacteria 10447
110 Ga0501084_0024071 3300054114 Bacteria 5078
111 Ga0501082_0005284 3300060353 Bacteria 11225
112 Ga0501082_0064821 3300060353 Bacteria 3146
113 Ga0530510_0003072 3300061734 Bacteria 11468
114 Ga0530510_0056454 3300061734 Bacteria 2837
115 2808871736 2808606365 Bacteria 4301966
116 2643733914 2643221542 Bacteria 3563959
117 2643769275 2643221549 Bacteria 4042819
118 2643826938 2643221561 Bacteria 4984412
119 2643852406 2643221567 Bacteria 4163945
120 2643877007 2643221572 Bacteria 3614809
121 2643891554 2643221576 Bacteria 5214352
122 2643960602 2643221590 Bacteria 5214697
123 2644035900 2643221604 Bacteria 5014917
124 2644102222 2643221617 Bacteria 5139111
125 2644112732 2643221619 Bacteria 4158469
126 2644115446 2643221620 Bacteria 5134593
127 2644136929 2643221624 Bacteria 4384879
128 2644170495 2643221630 Bacteria 3601215
129 2644384062 2643221669 Bacteria 3611286
130 2644534286 2643221696 Bacteria 5431823
131 2723643858 2721755702 Bacteria 4373124
132 2738692819 2738541272 Bacteria 6848551
133 2738871821 2738541305 Bacteria 4910150
134 2739327981 2738543027 Bacteria 6409078
135 2739608115 2739367654 Bacteria 6049412
136 2760303882 2758568522 Bacteria 5953541
137 2760622183 2758568621 Bacteria 5967089
138 2774394371 2773857762 Bacteria 5971770
139 2808900279 2808606372 Bacteria 4649509
140 2809027009 2808606394 Bacteria 6248540
141 2809194770 2808606439 Bacteria 5952208
142 2812333265 2811994874 Bacteria 5367947
143 2812352982 2811994878 Bacteria 5992952
144 2835189763 2835188231 Bacteria 3476928
145 2852665026 2852663356 Bacteria 4090475
146 2857740192 2857737099 Bacteria 3104305
147 2891972752 2891968417 Bacteria 5821697
148 2895662211 2895660088 Bacteria 3782833
149 2919444847 2919443155 Bacteria 4072969
150 2919448154 2919446982 Bacteria 3994487
151 2935412302 2935409751 Bacteria 4179611
152 2946043928 2946041624 Bacteria 4191385
153 2946081196 2946080515 Bacteria 4310960
154 3001890356 3001889506 Bacteria 2975194
155 8004185386 8004182704 Bacteria 3391155
156 8056580367 8056579771 Bacteria 5840325
157 JGI24740J21852_10014816
158 JGI25154J39366_1001181
159 Ga0070675_100072055
160 Ga0070700_100012149
161 Ga0070663_100133986
162 Ga0068857_100062823
163 Ga0068861_100043125
164 Ga0081455_10000397
165 Ga0081538_10000036
166 Ga0075365_10042204
167 Ga0075428_100000373
168 Ga0075431_100005251
169 Ga0075429_100002265
170 Ga0111539_10015514
171 Ga0157380_10057967
172 Ga0157380_10299347
173 Ga0163161_10115172
174 Ga0209646_1000168
175 Ga0207688_10013848
176 Ga0207678_10162003
177 Ga0207708_10049258
178 Ga0207674_10130902
179 Ga0207675_100071033
180 Ga0207683_10029382
181 Ga0314311_1123238
182 Ga0307405_10075039
183 Ga0307410_10083235
184 Ga0307406_10001639
185 Ga0307407_10024653
186 Ga0307409_100007935
187 Ga0307409_100104550
188 Ga0307416_100032213
189 Ga0307414_10135295
190 Ga0395900_0216969
191 Ga0395898_0005536
192 Ga0395898_0015656
193 Ga0395901_0015851
194 Ga0395901_0089760
195 Ga0395901_0125693
196 Ga0466972_0050067
197 Ga0466965_0020728
198 Ga0466965_0033165
199 Ga0466961_0115430
200 Ga0466970_0000552
201 Ga0466970_0068362
202 Ga0466960_0005626
203 Ga0495590_0000119
204 Ga0495629_0108842
205 Ga0495638_0016035
206 Ga0495641_0027549
207 Ga0495587_0099108
208 Ga0495656_0016697
209 Ga0495672_0051965
210 Ga0496102_0081898
211 Ga0496102_0117843
212 Ga0496103_0010630
213 Ga0496114_0013149
214 Ga0496114_0159289
215 Ga0496126_0115022
216 Ga0501031_0002139
217 Ga0501031_0097880
218 Ga0501032_0034320
219 Ga0501033_0019850
220 Ga0501034_0066323
221 Ga0501036_0005002
222 Ga0501036_0113045
223 Ga0501036_0172529
224 Ga0501037_0043717
225 Ga0501038_0021821
226 Ga0501038_0047220
227 Ga0501038_0074586
228 Ga0501039_0002088
229 Ga0501039_0009028
230 Ga0501039_0012876
231 Ga0501039_0081930
232 Ga0501040_0002930
233 Ga0501041_0006989
234 Ga0501041_0077395
235 Ga0501042_0004114
236 Ga0501042_0056013
237 Ga0501042_0077143
238 Ga0501043_0044484
239 Ga0501046_0008643
240 Ga0501048_0013871
241 Ga0501048_0015474
242 Ga0501067_0082173
243 Ga0501068_0004878
244 Ga0501069_0062570
245 Ga0501071_0007611
246 Ga0501072_0024975
247 Ga0501074_0041002
248 Ga0501075_0002633
249 Ga0501076_0003946
250 Ga0501079_0001018
251 Ga0501080_0052902
252 Ga0501080_0147916
253 Ga0501081_0006569
254 Ga0501035_0011092
255 Ga0501035_0120673
256 Ga0501045_0010839
257 nmdc:mga0yw44_46368_c1
258 nmdc:mga05p37_3068_c1
259 nmdc:mga09592_483_c1
260 nmdc:mga0qj67_76533_c1
261 nmdc:mga06r32_434_c1
262 nmdc:mga06r32_737_c1
263 nmdc:mga08y16_2764_c1
264 Ga0500568_0007035
265 Ga0501084_0005437
266 Ga0501084_0024071
267 Ga0501082_0005284
268 Ga0501082_0064821
269 Ga0530510_0003072
270 Ga0530510_0056454
271 2808871736
272 2643733914
273 2643769275
274 2643826938
275 2643852406
276 2643877007
277 2643891554
278 2643960602
279 2644035900
280 2644102222
281 2644112732
282 2644115446
283 2644136929
284 2644170495
285 2644384062
286 2644534286
287 2723643858
288 2738692819
289 2738871821
290 2739327981
291 2739608115
292 2760303882
293 2760622183
294 2774394371
295 2808900279
296 2809027009
297 2809194770
298 2812333265
299 2812352982
300 2835189763
301 2852665026
302 2857740192
303 2891972752
304 2895662211
305 2919444847
306 2919448154
307 2935412302
308 2946043928
309 2946081196
310 3001890356
311 8004185386
312 8056580367

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

52

360

0.87

PF07690

MFS_1

Major Facilitator Superfamily

309

486

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.8499 1 402
6t1z-assembly1.cif.gz_A lmrp from l. lactis, in an outward-open conformation, bound to hoechst 33342 0.8379 1 402
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8335 9 401
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.8209 9 401
7lo8-assembly1.cif.gz_Z nora in complex with fab36 0.8196 11 401
ID Description Score Start End Superfamily
af_A0A1D6LG74_1_148_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9197 55 186 1.20.1250.20
af_Q58713_262_398_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9087 50 186 1.20.1250.20
af_Q19933_4_169_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8954 10 158 1.20.1250.20
af_Q54XU7_308_497_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8901 10 186 1.20.1250.20
af_P33026_213_392_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.889 11 186 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A0L6CPE7-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9684 1 421 GO:0005886
GO:0022857
AF-A0A0L6CPE7-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9639 1 421 GO:0005886
GO:0022857
AF-A0A444AUQ0-F1-model_v4 deleted 0.9605 143 413
AF-A0A6I2XLH2-F1-model_v4 deleted 0.9592 8 343
AF-A0A7K0A468-F1-model_v4 MFS transporter 0.9587 8 421 GO:0005886
GO:0022857

Map