F225313

General Info

Members Datasets Scaffolds Average Seq Length
156 62 312 464

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0071500|Ga0316582_0071500_38_1555
Length 505
Sequence MSMLDQDLVTREIENVRVLILGLAREGSALARFLAERGASVTVTDIKPSEALTDRISALSGLPLRYALGSHPEALLDETDILFVSPGIPLGIPFLVEARRRGVPLSSETRLFTRLCPALVVGVTGSSGKSTTTALAGELIRAAGRRTWVGGNIGRPLIGDLDKIGPDDVVVMELSSFQLELFGPWPATRRRGGRGFLFDPTGWSPQVAAVLNITPNHLDRHATMEAYVTAKGHILAHQHPSALAILNFDDPVTREMGSRAIDAGQRVLWFSLEHEVEEGALLRDGQLILRLAGHEETYCRKDDLKLLGRHNLANALAACAVAAGSGIALHEERAWTRGSLDKWRQVLTSFPGVEHRLELVRELDEVRWYNDSIATTPERTVAALRAFDSPIVLLAGGRDKHLPWDEMAALTLRKVRYLILFGEAAGLIERAIRDAQEQLGAGPSETIAYHVDTLQDAVELAFHLAQPGDVVLLSPGGTSFDAYRDFVARGEHFRQLVQNLETGHV

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
19 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
22 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
23 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
24 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
25 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
26 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
27 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
28 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
29 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
30 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
31 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
32 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
33 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
34 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
35 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
36 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
37 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
38 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
39 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
40 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
41 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
42 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
43 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
44 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
45 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
46 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
51 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
52 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
53 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
54 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
55 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
56 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
57 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
58 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
59 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
60 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
61 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
62 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.44
Metatranscriptomes 2.56
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 91.67
Stem 0
Stem Tuber 0
Unclassified 7.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0071500 3300036647 Bacteria 2247
2 SwRhRL2b_contig_1013028 2162886007 Bacteria 4094
3 Ga0065704_10070789 3300005289 Bacteria 16089
4 Ga0065707_10000467 3300005295 Bacteria 75943
5 Ga0065707_10098339 3300005295 Bacteria 3093
6 Ga0070680_100142679 3300005336 Bacteria 2009
7 Ga0070706_100026100 3300005467 Bacteria 5375
8 Ga0070698_100016452 3300005471 Bacteria 7804
9 Ga0070698_100134930 3300005471 Bacteria 2422
10 Ga0070699_100004954 3300005518 Bacteria 11745
11 Ga0070699_100017792 3300005518 Bacteria 6103
12 Ga0070699_100024872 3300005518 Bacteria 5161
13 Ga0070699_100027706 3300005518 Bacteria 4885
14 Ga0070695_100015675 3300005545 Bacteria 4578
15 Ga0070704_100038730 3300005549 Unclassified 3268
16 Ga0081539_10010773 3300005985 Bacteria 7362
17 Ga0075428_100007648 3300006844 Bacteria 11977
18 Ga0075431_100010511 3300006847 Bacteria 9304
19 Ga0075429_100020264 3300006880 Bacteria 5767
20 Ga0075429_100069868 3300006880 Unclassified 3057
21 Ga0075429_100113356 3300006880 Bacteria 2370
22 Ga0111539_10042855 3300009094 Bacteria 5430
23 Ga0114129_10014964 3300009147 Bacteria 11053
24 Ga0114129_10018339 3300009147 Bacteria 9970
25 Ga0114129_10027224 3300009147 Bacteria 8094
26 Ga0114129_10078965 3300009147 Bacteria 4576
27 Ga0114129_10087339 3300009147 Unclassified 4324
28 Ga0105243_10003565 3300009148 Bacteria 12564
29 Ga0213876_10011410 3300021384 Bacteria 4744
30 Ga0213876_10065215 3300021384 Bacteria 1922
31 Ga0207684_10036996 3300025910 Bacteria 4143
32 Ga0207684_10149337 3300025910 Bacteria 2010
33 Ga0207660_10018235 3300025917 Unclassified 4676
34 Ga0316575_10026541 3300031665 Unclassified 2251
35 Ga0316579_10013384 3300031691 Bacteria 3528
36 Ga0316579_10015622 3300031691 Bacteria 3301
37 Ga0316579_10033787 3300031691 Bacteria 2351
38 Ga0316576_10003394 3300031727 Bacteria 9313
39 Ga0316576_10006348 3300031727 Bacteria 7349
40 Ga0316576_10018020 3300031727 Bacteria 4812
41 Ga0316576_10023013 3300031727 Bacteria 4334
42 Ga0316578_10001051 3300031728 Bacteria 10644
43 Ga0316578_10005647 3300031728 Bacteria 6088
44 Ga0316578_10008683 3300031728 Bacteria 5185
45 Ga0316578_10021977 3300031728 Unclassified 3549
46 Ga0316578_10075853 3300031728 Bacteria 1995
47 Ga0307405_10066964 3300031731 Bacteria 2292
48 Ga0316577_10000316 3300031733 Bacteria 17687
49 Ga0316577_10000663 3300031733 Bacteria 14405
50 Ga0316577_10002187 3300031733 Bacteria 9604
51 Ga0316577_10002723 3300031733 Bacteria 8799
52 Ga0316577_10004280 3300031733 Bacteria 7348
53 Ga0316577_10028490 3300031733 Bacteria 3116
54 Ga0316577_10062142 3300031733 Bacteria 2085
55 Ga0316577_10063492 3300031733 Bacteria 2062
56 Ga0307410_10124119 3300031852 Bacteria 1887
57 Ga0307407_10008905 3300031903 Bacteria 4639
58 Ga0307412_10091248 3300031911 Bacteria 2132
59 Ga0307411_10108475 3300032005 Bacteria 1981
60 Ga0316583_10001021 3300032133 Bacteria 9042
61 Ga0316585_10000046 3300032137 Bacteria 19073
62 Ga0316585_10006530 3300032137 Bacteria 3338
63 Ga0316585_10013587 3300032137 Bacteria 2425
64 Ga0316580_10001373 3300032139 Bacteria 6335
65 Ga0316593_10036650 3300032168 Bacteria 1618
66 Ga0316588_1001322 3300033528 Bacteria 4004
67 Ga0316588_1004497 3300033528 Unclassified 2646
68 Ga0316596_1000108 3300033541 Bacteria 10576
69 Ga0316574_0000440 3300035398 Bacteria 16535
70 Ga0316574_0002831 3300035398 Bacteria 8796
71 Ga0316574_0021373 3300035398 Bacteria 3842
72 Ga0316574_0048637 3300035398 Unclassified 2634
73 Ga0316582_0000032 3300036647 Bacteria 32662
74 Ga0316582_0000076 3300036647 Bacteria 25350
75 Ga0316582_0000294 3300036647 Bacteria 17180
76 Ga0316582_0002805 3300036647 Bacteria 8314
77 Ga0316582_0007285 3300036647 Bacteria 5883
78 Ga0316582_0015148 3300036647 Bacteria 4399
79 Ga0316582_0016191 3300036647 Bacteria 4284
80 Ga0316582_0030766 3300036647 Bacteria 3273
81 Ga0316582_0055514 3300036647 Bacteria 2525
82 Ga0316582_0071631 3300036647 Bacteria 2245
83 Ga0316584_0000198 3300036712 Bacteria 29575
84 Ga0316584_0003143 3300036712 Bacteria 10668
85 Ga0316584_0013202 3300036712 Bacteria 5841
86 Ga0316584_0015610 3300036712 Bacteria 5433
87 Ga0316584_0016876 3300036712 Bacteria 5239
88 Ga0316584_0021895 3300036712 Bacteria 4654
89 Ga0316584_0031191 3300036712 Unclassified 3941
90 Ga0316584_0058227 3300036712 Bacteria 2893
91 Ga0316584_0059373 3300036712 Bacteria 2864
92 Ga0316584_0064331 3300036712 Bacteria 2746
93 Ga0316584_0080986 3300036712 Bacteria 2432
94 Ga0316584_0096084 3300036712 Bacteria 2218
95 Ga0316584_0102778 3300036712 Unclassified 2140
96 Ga0316584_0168638 3300036712 Bacteria 1625
97 Ga0316581_0004061 3300037588 Bacteria 3698
98 Ga0316581_0004830 3300037588 Bacteria 3468
99 Ga0436364_0799428 3300037853 Bacteria 3684
100 Ga0436364_1472449 3300037853 Bacteria 2852
101 Ga0400484_39407 3300038725 Unclassified 3038
102 Ga0400489_06344 3300039093 Bacteria 8144
103 Ga0400489_73801 3300039093 Bacteria 106363
104 Ga0400487_09372 3300039110 Bacteria 1752
105 Ga0436365_0421134 3300039437 Bacteria 2286
106 Ga0436365_1139305 3300039437 Bacteria 30633
107 Ga0436365_1327228 3300039437 Bacteria 35109
108 Ga0436365_1400422 3300039437 Bacteria 2057
109 Ga0436365_1647618 3300039437 Bacteria 7984
110 Ga0436360_0401561 3300039438 Bacteria 1373
111 Ga0436362_1116073 3300039453 Bacteria 2512
112 Ga0451577_0005808 3300042876 Bacteria 12499
113 Ga0451577_0039307 3300042876 Bacteria 4252
114 Ga0451577_0092481 3300042876 Bacteria 2700
115 Ga0451577_0227544 3300042876 Bacteria 1686
116 Ga0451577_0300315 3300042876 Bacteria 1455
117 Ga0453683_0000294 3300044673 Bacteria 63845
118 Ga0453683_0025858 3300044673 Bacteria 3727
119 Ga0453684_0000021 3300044712 Bacteria 873490
120 Ga0453684_0000023 3300044712 Bacteria 857153
121 Ga0453684_0001401 3300044712 Bacteria 69706
122 Ga0453684_0001492 3300044712 Bacteria 66005
123 Ga0453684_0004249 3300044712 Bacteria 30622
124 Ga0453684_0007259 3300044712 Bacteria 20517
125 Ga0453684_0010151 3300044712 Bacteria 16165
126 Ga0453684_0010926 3300044712 Bacteria 15361
127 Ga0453684_0014133 3300044712 Bacteria 12832
128 Ga0453684_0023317 3300044712 Bacteria 9126
129 Ga0453684_0026836 3300044712 Bacteria 8298
130 Ga0453684_0034658 3300044712 Bacteria 6999
131 Ga0453684_0088853 3300044712 Bacteria 3824
132 Ga0453684_0093989 3300044712 Bacteria 3691
133 Ga0453684_0127266 3300044712 Bacteria 3064
134 Ga0453684_0192129 3300044712 Bacteria 2387
135 Ga0453684_0198900 3300044712 Bacteria 2337
136 Ga0466960_0007154 3300044901 Bacteria 4515
137 Ga0451576_0009380 3300045051 Bacteria 11350
138 Ga0451576_0044639 3300045051 Bacteria 4671
139 Ga0451576_0200833 3300045051 Bacteria 2082
140 Ga0501075_0141196 3300049591 Bacteria 1836
141 Ga0501076_0008601 3300049592 Bacteria 7487
142 Ga0501079_0265030 3300049741 Unclassified 1343
143 Ga0501080_0080421 3300049742 Bacteria 3029
144 Ga0501045_0078373 3300049824 Bacteria 2436
145 nmdc:mga05p37_126026_c1 3300050507 Bacteria 3145
146 nmdc:mga05p37_16556_c1 3300050507 Bacteria 8881
147 nmdc:mga05p37_29631_c1 3300050507 Bacteria 6678
148 nmdc:mga09592_11307_c1 3300050508 Bacteria 7261
149 nmdc:mga09592_16072_c1 3300050508 Bacteria 6117
150 nmdc:mga0qj67_16214_c1 3300050509 Bacteria 5646
151 nmdc:mga06r32_104781_c1 3300050510 Bacteria 2778
152 nmdc:mga06r32_4510_c1 3300050510 Bacteria 12475
153 Ga0501082_0027855 3300060353 Bacteria 4866
154 Ga0501082_0038739 3300060353 Bacteria 4111
155 Ga0501082_0056452 3300060353 Bacteria 3383
156 Ga0530510_0078827 3300061734 Bacteria 2396
157 Ga0316582_0071500
158 SwRhRL2b_contig_1013028
159 Ga0065704_10070789
160 Ga0065707_10000467
161 Ga0065707_10098339
162 Ga0070680_100142679
163 Ga0070706_100026100
164 Ga0070698_100016452
165 Ga0070698_100134930
166 Ga0070699_100004954
167 Ga0070699_100017792
168 Ga0070699_100024872
169 Ga0070699_100027706
170 Ga0070695_100015675
171 Ga0070704_100038730
172 Ga0081539_10010773
173 Ga0075428_100007648
174 Ga0075431_100010511
175 Ga0075429_100020264
176 Ga0075429_100069868
177 Ga0075429_100113356
178 Ga0111539_10042855
179 Ga0114129_10014964
180 Ga0114129_10018339
181 Ga0114129_10027224
182 Ga0114129_10078965
183 Ga0114129_10087339
184 Ga0105243_10003565
185 Ga0213876_10011410
186 Ga0213876_10065215
187 Ga0207684_10036996
188 Ga0207684_10149337
189 Ga0207660_10018235
190 Ga0316575_10026541
191 Ga0316579_10013384
192 Ga0316579_10015622
193 Ga0316579_10033787
194 Ga0316576_10003394
195 Ga0316576_10006348
196 Ga0316576_10018020
197 Ga0316576_10023013
198 Ga0316578_10001051
199 Ga0316578_10005647
200 Ga0316578_10008683
201 Ga0316578_10021977
202 Ga0316578_10075853
203 Ga0307405_10066964
204 Ga0316577_10000316
205 Ga0316577_10000663
206 Ga0316577_10002187
207 Ga0316577_10002723
208 Ga0316577_10004280
209 Ga0316577_10028490
210 Ga0316577_10062142
211 Ga0316577_10063492
212 Ga0307410_10124119
213 Ga0307407_10008905
214 Ga0307412_10091248
215 Ga0307411_10108475
216 Ga0316583_10001021
217 Ga0316585_10000046
218 Ga0316585_10006530
219 Ga0316585_10013587
220 Ga0316580_10001373
221 Ga0316593_10036650
222 Ga0316588_1001322
223 Ga0316588_1004497
224 Ga0316596_1000108
225 Ga0316574_0000440
226 Ga0316574_0002831
227 Ga0316574_0021373
228 Ga0316574_0048637
229 Ga0316582_0000032
230 Ga0316582_0000076
231 Ga0316582_0000294
232 Ga0316582_0002805
233 Ga0316582_0007285
234 Ga0316582_0015148
235 Ga0316582_0016191
236 Ga0316582_0030766
237 Ga0316582_0055514
238 Ga0316582_0071631
239 Ga0316584_0000198
240 Ga0316584_0003143
241 Ga0316584_0013202
242 Ga0316584_0015610
243 Ga0316584_0016876
244 Ga0316584_0021895
245 Ga0316584_0031191
246 Ga0316584_0058227
247 Ga0316584_0059373
248 Ga0316584_0064331
249 Ga0316584_0080986
250 Ga0316584_0096084
251 Ga0316584_0102778
252 Ga0316584_0168638
253 Ga0316581_0004061
254 Ga0316581_0004830
255 Ga0436364_0799428
256 Ga0436364_1472449
257 Ga0400484_39407
258 Ga0400489_06344
259 Ga0400489_73801
260 Ga0400487_09372
261 Ga0436365_0421134
262 Ga0436365_1139305
263 Ga0436365_1327228
264 Ga0436365_1400422
265 Ga0436365_1647618
266 Ga0436360_0401561
267 Ga0436362_1116073
268 Ga0451577_0005808
269 Ga0451577_0039307
270 Ga0451577_0092481
271 Ga0451577_0227544
272 Ga0451577_0300315
273 Ga0453683_0000294
274 Ga0453683_0025858
275 Ga0453684_0000021
276 Ga0453684_0000023
277 Ga0453684_0001401
278 Ga0453684_0001492
279 Ga0453684_0004249
280 Ga0453684_0007259
281 Ga0453684_0010151
282 Ga0453684_0010926
283 Ga0453684_0014133
284 Ga0453684_0023317
285 Ga0453684_0026836
286 Ga0453684_0034658
287 Ga0453684_0088853
288 Ga0453684_0093989
289 Ga0453684_0127266
290 Ga0453684_0192129
291 Ga0453684_0198900
292 Ga0466960_0007154
293 Ga0451576_0009380
294 Ga0451576_0044639
295 Ga0451576_0200833
296 Ga0501075_0141196
297 Ga0501076_0008601
298 Ga0501079_0265030
299 Ga0501080_0080421
300 Ga0501045_0078373
301 nmdc:mga05p37_126026_c1
302 nmdc:mga05p37_16556_c1
303 nmdc:mga05p37_29631_c1
304 nmdc:mga09592_11307_c1
305 nmdc:mga09592_16072_c1
306 nmdc:mga0qj67_16214_c1
307 nmdc:mga06r32_104781_c1
308 nmdc:mga06r32_4510_c1
309 Ga0501082_0027855
310 Ga0501082_0038739
311 Ga0501082_0056452
312 Ga0530510_0078827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21799

MurD-like_N

Mur ligase MurD-like, N-terminal domain

16

107

0.93

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

355

477

0.86

PF08245

Mur_ligase_M

Mur ligase middle domain

199

322

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2bi8-assembly1.cif.gz_A udp-galactopyranose mutase from klebsiella pneumoniae with reduced fad 0.9489 10 44
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.9478 10 44
7fgp-assembly1.cif.gz_A crystal structure of aureimonas altamirenisis flavin-containing opine dehydrogenase (fad-bound form) 0.9476 10 42
3inr-assembly1.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (oxidized) 0.9453 10 44
5tuk-assembly3.cif.gz_C crystal structure of tetracycline destructase tet(51) 0.9216 11 45
ID Description Score Start End Superfamily
af_Q8VYV2_23_370_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.001 15 43 3.50.50.60
af_Q0D7W4_71_358_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9849 11 43 3.50.50.60
af_P37631_5_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9755 14 43 3.40.50.720
af_P9WNY9_4_366_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9684 14 44 3.50.50.60
6j0zC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9634 14 45 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A3N5SGY5-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC 6.3.2.9) 0.987 7 143 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A661VTL8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.9859 12 207 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A661VTL8-F1-model_v4 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 0.976 12 207 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009058
GO:0051301
AF-A0A645A669-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) 0.9694 106 462 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
AF-A0A7C1Z8K6-F1-model_v4 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase) 0.9686 7 462 GO:0005524
GO:0005737
GO:0008360
GO:0008764
GO:0009252
GO:0051301
GO:0071555

Map