F222926

General Info

Members Datasets Scaffolds Average Seq Length
155 131 141 171

Family's Representative Sequence

Representative Sequence 3300044842|Ga0466957_0283395|Ga0466957_0283395_450_1013
Length 187
Sequence LAAACAGNPARVINWAELFGSQTPPLEIVLRGTVMYLTLFALLRIVLKRESGTTGMTDLLVVVLLADAAQNGMAGNYTSITDGVMLVAVIMAWSFLLDWVAYHWAWAARVIRPRPLRLIRDGQMLPHNMRKELITKDELLAQLRQQGIAEVTEVRDAWMEHDGQFSFVPVDGPGSGQAKTKRQKQAF

Samples

Sample ID Description Type Environment
1 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
2 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
3 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
4 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
5 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
6 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
7 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
8 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
9 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
10 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
11 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
12 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
13 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
14 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
15 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
16 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
17 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
20 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
21 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
22 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
23 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
30 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
65 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
96 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
97 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
98 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
102 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
105 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
120 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
127 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
128 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
129 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
130 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
131 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.32
Metatranscriptomes 0.65
Isolates 9.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.45
Nodule 0.65
Rhizoplane 0
Rhizosphere 81.29
Stem 0
Stem Tuber 0
Unclassified 11.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNAas_1008601 3300000532 Unclassified 671
2 JGI25155J39150_1000070 3300002704 Bacteria 64434
3 JGI25156J39149_1000039 3300002705 Bacteria 107108
4 JGI25154J39366_1000059 3300002738 Bacteria 107114
5 JGI25157J39369_1000057 3300002741 Bacteria 107108
6 Ga0055532_1000018 3300003758 Bacteria 305466
7 Ga0055535_1011304 3300003761 Bacteria 1418
8 Ga0055536_1007377 3300003781 Bacteria 4937
9 JGI25405J52794_10067412 3300003911 Bacteria 778
10 Ga0070658_10224054 3300005327 Bacteria 1591
11 Ga0070683_101356386 3300005329 Bacteria 683
12 Ga0070660_100736454 3300005339 Bacteria 827
13 Ga0070661_100903135 3300005344 Bacteria 729
14 Ga0070659_100409887 3300005366 Bacteria 1145
15 Ga0070714_100219408 3300005435 Bacteria 1747
16 Ga0070701_10129932 3300005438 Bacteria 1430
17 Ga0070681_10002511 3300005458 Bacteria 16820
18 Ga0070681_10144351 3300005458 Bacteria 2310
19 Ga0070707_101152343 3300005468 Bacteria 741
20 Ga0070679_100001468 3300005530 Bacteria 20910
21 Ga0070684_100493185 3300005535 Bacteria 1134
22 Ga0070686_100179646 3300005544 Bacteria 1502
23 Ga0068855_100156816 3300005563 Bacteria 2586
24 Ga0068855_100447456 3300005563 Bacteria 1410
25 Ga0068857_100177091 3300005577 Bacteria 1940
26 Ga0068854_100237731 3300005578 Bacteria 1449
27 Ga0068856_100009936 3300005614 Bacteria 9243
28 Ga0068852_100036688 3300005616 Bacteria 4105
29 Ga0068852_101120778 3300005616 Bacteria 807
30 Ga0068852_101282509 3300005616 Bacteria 754
31 Ga0068860_100983779 3300005843 Bacteria 861
32 Ga0081455_10000079 3300005937 Bacteria 104277
33 Ga0075428_100185057 3300006844 Unclassified 2254
34 Ga0075430_100385056 3300006846 Unclassified 1157
35 Ga0075431_100365725 3300006847 Bacteria 1448
36 Ga0075434_100358452 3300006871 Bacteria 1479
37 Ga0075429_100285118 3300006880 Bacteria 1446
38 Ga0105240_10529502 3300009093 Bacteria 1307
39 Ga0114129_10043223 3300009147 Bacteria 6340
40 Ga0114129_12476502 3300009147 Unclassified 621
41 Ga0105241_11475878 3300009174 Bacteria 654
42 Ga0105239_10250484 3300010375 Bacteria 1989
43 Ga0105246_10229545 3300011119 Bacteria 1461
44 Ga0157373_10173092 3300013100 Bacteria 1519
45 Ga0157370_10214625 3300013104 Bacteria 1783
46 Ga0157370_10264436 3300013104 Bacteria 1589
47 Ga0157369_10572643 3300013105 Bacteria 1166
48 Ga0163162_10830737 3300013306 Bacteria 1040
49 Ga0157372_10011730 3300013307 Bacteria 9331
50 Ga0157372_10077051 3300013307 Bacteria 3765
51 Ga0157375_10077456 3300013308 Unclassified 3355
52 Ga0157380_11479427 3300014326 Bacteria 732
53 Ga0182008_10241753 3300014497 Bacteria 929
54 Ga0182006_1005115 3300015261 Bacteria 6301
55 Ga0163161_10287873 3300017792 Bacteria 1291
56 Ga0224712_10163853 3300022467 Bacteria 993
57 Ga0209435_100007 3300025206 Bacteria 516857
58 Ga0209147_100017 3300025229 Bacteria 516857
59 Ga0209258_100297 3300025242 Bacteria 81353
60 Ga0209646_1000096 3300025246 Bacteria 182388
61 Ga0209026_1000052 3300025250 Bacteria 248897
62 Ga0209148_1008932 3300025254 Bacteria 1985
63 Ga0209759_1000174 3300025256 Bacteria 107149
64 Ga0209455_1012007 3300025272 Bacteria 2096
65 Ga0209676_1000286 3300025292 Bacteria 103478
66 Ga0209050_1013425 3300025298 Bacteria 3638
67 Ga0207705_10209092 3300025909 Bacteria 1480
68 Ga0207707_10012626 3300025912 Bacteria 7340
69 Ga0207657_10040655 3300025919 Bacteria 4118
70 Ga0207649_10510039 3300025920 Bacteria 916
71 Ga0207652_10023060 3300025921 Bacteria 5156
72 Ga0207709_11576041 3300025935 Unclassified 545
73 Ga0207667_10181703 3300025949 Bacteria 2160
74 Ga0207667_10858414 3300025949 Bacteria 902
75 Ga0207640_10755458 3300025981 Bacteria 839
76 Ga0207702_10004077 3300026078 Bacteria 13112
77 Ga0207674_10746497 3300026116 Bacteria 945
78 Ga0207698_10280656 3300026142 Bacteria 1540
79 Ga0207698_10552677 3300026142 Bacteria 1129
80 Ga0265327_10000670 3300031251 Bacteria 54983
81 Ga0307514_10000592 3300031649 Bacteria 68079
82 Ga0307410_10158165 3300031852 Unclassified 1695
83 Ga0307409_100860314 3300031995 Bacteria 918
84 Ga0307416_101537227 3300032002 Unclassified 771
85 Ga0307415_100228089 3300032126 Bacteria 1498
86 Ga0395898_1240941 3300037466 Bacteria 676
87 Ga0451577_0071016 3300042876 Bacteria 3105
88 Ga0466969_0002387 3300044656 Bacteria 10030
89 Ga0466972_0023926 3300044658 Bacteria 3035
90 Ga0466972_0046291 3300044658 Bacteria 2106
91 Ga0466972_0134750 3300044658 Bacteria 1163
92 Ga0453683_0938131 3300044673 Unclassified 573
93 Ga0466965_0010050 3300044683 Bacteria 4405
94 Ga0466966_0000104 3300044684 Bacteria 51442
95 Ga0466966_0378440 3300044684 Bacteria 851
96 Ga0466961_0013310 3300044693 Bacteria 5266
97 Ga0466964_0104797 3300044706 Bacteria 1252
98 Ga0466964_0155828 3300044706 Bacteria 1063
99 Ga0466964_0183333 3300044706 Bacteria 994
100 Ga0453684_0012427 3300044712 Bacteria 14042
101 Ga0453684_0170333 3300044712 Bacteria 2567
102 Ga0466971_0083063 3300044719 Bacteria 1462
103 Ga0466968_0027475 3300044735 Bacteria 2342
104 Ga0466968_0061062 3300044735 Bacteria 1625
105 Ga0466970_0246896 3300044765 Bacteria 999
106 Ga0466957_0283395 3300044842 Bacteria 1109
107 Ga0466960_0005431 3300044901 Bacteria 5049
108 Ga0466959_0000010 3300045049 Bacteria 176306
109 Ga0466959_0065699 3300045049 Bacteria 2632
110 Ga0451576_0029384 3300045051 Bacteria 5883
111 Ga0466958_0020253 3300045836 Bacteria 3878
112 Ga0466967_1197380 3300045976 Bacteria 757
113 Ga0495668_0000520 3300046616 Bacteria 47903
114 Ga0495625_0000909 3300046660 Bacteria 39875
115 Ga0496118_0224614 3300048921 Bacteria 1090
116 Ga0501031_0600442 3300049568 Unclassified 708
117 Ga0501039_0383745 3300049575 Unclassified 1104
118 Ga0501039_0514695 3300049575 Bacteria 940
119 Ga0501040_0586227 3300049576 Unclassified 805
120 Ga0501068_0048332 3300049584 Bacteria 2568
121 Ga0501069_0484329 3300049585 Unclassified 737
122 Ga0501072_0195082 3300049588 Unclassified 1615
123 Ga0501075_0156821 3300049591 Bacteria 1736
124 Ga0501076_0098476 3300049592 Unclassified 2356
125 Ga0501076_0167603 3300049592 Unclassified 1790
126 Ga0501079_0115651 3300049741 Unclassified 2085
127 Ga0501079_0125607 3300049741 Bacteria 1996
128 Ga0501080_0389896 3300049742 Bacteria 1254
129 Ga0501080_1367685 3300049742 Unclassified 605
130 Ga0501081_0156384 3300049743 Unclassified 1641
131 Ga0501081_0849493 3300049743 Unclassified 688
132 nmdc:mga05p37_33522_c1 3300050507 Bacteria 6289
133 nmdc:mga09592_390971_c1 3300050508 Bacteria 1202
134 nmdc:mga06r32_435932_c1 3300050510 Bacteria 1291
135 Ga0500559_0077390 3300053136 Bacteria 1507
136 Ga0501084_0190103 3300054114 Unclassified 1732
137 Ga0590077_067850 3300059426 Bacteria 812
138 Ga0466962_0016583 3300061719 Bacteria 3552
139 Ga0530510_0006073 3300061734 Bacteria 8387
140 Ga0530510_0638733 3300061734 Bacteria 810
141 Ga0530510_0775457 3300061734 Bacteria 731

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005458 Ga0070681_10144351 Ga0070681_101443512 149
2 iso_pu_bacteria 2548876994 2550695033 157
3 iso_pu_bacteria 2904584206 2904585284 157
4 iso_pu_bacteria 2904589729 2904593634 157
5 iso_pu_bacteria 2904601388 2904604220 157
6 iso_pu_bacteria 2919079590 2919081554 157
7 3300049575 Ga0501039_0514695 Ga0501039_0514695_282_767 159
8 3300049742 Ga0501080_1367685 Ga0501080_1367685_26_511 159
9 3300049743 Ga0501081_0849493 Ga0501081_0849493_17_502 159
10 3300061734 Ga0530510_0638733 Ga0530510_0638733_194_679 159
11 iso_pu_bacteria 2818991445 2819594159 159
12 3300015261 Ga0182006_1005115 Ga0182006_100511510 161
13 3300022467 Ga0224712_10163853 Ga0224712_101638531 161
14 iso_pu_bacteria 2515154088 2515497257 161
15 iso_pu_bacteria 2515154129 2515721030 161
16 iso_pu_bacteria 2515154137 2515758712 161
17 iso_pu_bacteria 2515154203 2516091986 161
18 3300017792 Ga0163161_10287873 Ga0163161_102878731 162
19 3300025935 Ga0207709_11576041 Ga0207709_115760411 162
20 3300049568 Ga0501031_0600442 Ga0501031_0600442_97_585 162
21 3300049575 Ga0501039_0383745 Ga0501039_0383745_431_919 162
22 3300049576 Ga0501040_0586227 Ga0501040_0586227_272_760 162
23 3300049588 Ga0501072_0195082 Ga0501072_0195082_698_1186 162
24 3300049591 Ga0501075_0156821 Ga0501075_0156821_537_1025 162
25 3300049592 Ga0501076_0167603 Ga0501076_0167603_1040_1528 162
26 3300049741 Ga0501079_0125607 Ga0501079_0125607_237_725 162
27 3300049742 Ga0501080_0389896 Ga0501080_0389896_28_516 162
28 3300049743 Ga0501081_0156384 Ga0501081_0156384_434_922 162
29 3300054114 Ga0501084_0190103 Ga0501084_0190103_382_870 162
30 iso_pu_bacteria 2867302475 2867304113 162
31 3300002704 JGI25155J39150_1000070 JGI25155J39150_100007043 163
32 3300002705 JGI25156J39149_1000039 JGI25156J39149_100003949 163
33 3300002738 JGI25154J39366_1000059 JGI25154J39366_100005949 163
34 3300002741 JGI25157J39369_1000057 JGI25157J39369_100005751 163
35 3300003761 Ga0055535_1011304 Ga0055535_10113041 163
36 3300003911 JGI25405J52794_10067412 JGI25405J52794_100674122 163
37 3300005937 Ga0081455_10000079 Ga0081455_1000007913 163
38 3300014497 Ga0182008_10241753 Ga0182008_102417531 163
39 3300025206 Ga0209435_100007 Ga0209435_100007421 163
40 3300025229 Ga0209147_100017 Ga0209147_10001752 163
41 3300025246 Ga0209646_1000096 Ga0209646_1000096109 163
42 3300025250 Ga0209026_1000052 Ga0209026_1000052174 163
43 3300025254 Ga0209148_1008932 Ga0209148_10089323 163
44 3300025256 Ga0209759_1000174 Ga0209759_100017452 163
45 3300025272 Ga0209455_1012007 Ga0209455_10120073 163
46 3300046660 Ga0495625_0000909 Ga0495625_0000909_31628_32119 163
47 3300048921 Ga0496118_0224614 Ga0496118_0224614_415_906 163
48 3300005327 Ga0070658_10224054 Ga0070658_102240542 164
49 3300044712 Ga0453684_0170333 Ga0453684_0170333_1838_2332 164
50 3300003758 Ga0055532_1000018 Ga0055532_1000018231 165
51 3300025242 Ga0209258_100297 Ga0209258_10029727 165
52 3300044658 Ga0466972_0023926 Ga0466972_0023926_1901_2413 166
53 3300044706 Ga0466964_0104797 Ga0466964_0104797_16_528 166
54 3300053136 Ga0500559_0077390 Ga0500559_0077390_876_1382 166
55 3300005616 Ga0068852_101282509 Ga0068852_1012825091 167
56 3300046616 Ga0495668_0000520 Ga0495668_0000520_16486_17040 168
57 iso_pu_bacteria 2867312974 2867313446 168
58 iso_pu_bacteria 2867319477 2867322733 168
59 iso_pu_bacteria 2929219909 2929220473 168
60 3300013308 Ga0157375_10077456 Ga0157375_100774564 169
61 3300031649 Ga0307514_10000592 Ga0307514_1000059219 170
62 3300049584 Ga0501068_0048332 Ga0501068_0048332_371_886 170
63 3300049592 Ga0501076_0098476 Ga0501076_0098476_637_1149 170
64 3300049741 Ga0501079_0115651 Ga0501079_0115651_1228_1740 170
65 3300059426 Ga0590077_067850 Ga0590077_067850_112_624 170
66 3300006846 Ga0075430_100385056 Ga0075430_1003850562 171
67 3300009147 Ga0114129_12476502 Ga0114129_124765021 171
68 3300031852 Ga0307410_10158165 Ga0307410_101581653 171
69 3300032126 Ga0307415_100228089 Ga0307415_1002280892 171
70 3300042876 Ga0451577_0071016 Ga0451577_0071016_1733_2248 171
71 3300044656 Ga0466969_0002387 Ga0466969_0002387_8865_9380 171
72 3300044673 Ga0453683_0938131 Ga0453683_0938131_11_526 171
73 3300044684 Ga0466966_0000104 Ga0466966_0000104_11182_11697 171
74 3300044712 Ga0453684_0012427 Ga0453684_0012427_8853_9368 171
75 3300045049 Ga0466959_0000010 Ga0466959_0000010_127737_128252 171
76 3300045051 Ga0451576_0029384 Ga0451576_0029384_1165_1680 171
77 3300061734 Ga0530510_0006073 Ga0530510_0006073_3082_3600 171
78 3300061734 Ga0530510_0775457 Ga0530510_0775457_56_592 171
79 3300003781 Ga0055536_1007377 Ga0055536_10073772 172
80 3300006847 Ga0075431_100365725 Ga0075431_1003657252 172
81 3300025292 Ga0209676_1000286 Ga0209676_1000286105 172
82 3300025298 Ga0209050_1013425 Ga0209050_10134254 172
83 3300044658 Ga0466972_0046291 Ga0466972_0046291_1116_1646 172
84 3300044683 Ga0466965_0010050 Ga0466965_0010050_2232_2762 172
85 3300044684 Ga0466966_0378440 Ga0466966_0378440_95_625 172
86 3300044693 Ga0466961_0013310 Ga0466961_0013310_3202_3732 172
87 3300044706 Ga0466964_0183333 Ga0466964_0183333_122_640 172
88 3300044719 Ga0466971_0083063 Ga0466971_0083063_237_767 172
89 3300044735 Ga0466968_0027475 Ga0466968_0027475_343_861 172
90 3300044735 Ga0466968_0061062 Ga0466968_0061062_587_1111 172
91 3300044765 Ga0466970_0246896 Ga0466970_0246896_206_736 172
92 3300049585 Ga0501069_0484329 Ga0501069_0484329_56_580 172
93 3300050510 nmdc:mga06r32_435932_c1 nmdc:mga06r32_435932_c1_451_978 172
94 3300061719 Ga0466962_0016583 Ga0466962_0016583_2322_2852 172
95 3300009174 Ga0105241_11475878 Ga0105241_114758782 173
96 3300031251 Ga0265327_10000670 Ga0265327_100006702 173
97 3300005329 Ga0070683_101356386 Ga0070683_1013563861 174
98 3300005339 Ga0070660_100736454 Ga0070660_1007364541 174
99 3300005344 Ga0070661_100903135 Ga0070661_1009031351 174
100 3300005435 Ga0070714_100219408 Ga0070714_1002194083 174
101 3300005458 Ga0070681_10002511 Ga0070681_100025117 174
102 3300005530 Ga0070679_100001468 Ga0070679_1000014689 174
103 3300005535 Ga0070684_100493185 Ga0070684_1004931852 174
104 3300005563 Ga0068855_100156816 Ga0068855_1001568162 174
105 3300005563 Ga0068855_100447456 Ga0068855_1004474562 174
106 3300005577 Ga0068857_100177091 Ga0068857_1001770914 174
107 3300005578 Ga0068854_100237731 Ga0068854_1002377311 174
108 3300005614 Ga0068856_100009936 Ga0068856_1000099368 174
109 3300005616 Ga0068852_100036688 Ga0068852_1000366882 174
110 3300005616 Ga0068852_101120778 Ga0068852_1011207781 174
111 3300009093 Ga0105240_10529502 Ga0105240_105295022 174
112 3300013100 Ga0157373_10173092 Ga0157373_101730921 174
113 3300013104 Ga0157370_10214625 Ga0157370_102146253 174
114 3300013104 Ga0157370_10264436 Ga0157370_102644362 174
115 3300013105 Ga0157369_10572643 Ga0157369_105726431 174
116 3300013307 Ga0157372_10011730 Ga0157372_100117306 174
117 3300013307 Ga0157372_10077051 Ga0157372_100770513 174
118 3300025909 Ga0207705_10209092 Ga0207705_102090922 174
119 3300025912 Ga0207707_10012626 Ga0207707_100126265 174
120 3300025919 Ga0207657_10040655 Ga0207657_100406554 174
121 3300025920 Ga0207649_10510039 Ga0207649_105100392 174
122 3300025921 Ga0207652_10023060 Ga0207652_100230605 174
123 3300025949 Ga0207667_10181703 Ga0207667_101817032 174
124 3300025949 Ga0207667_10858414 Ga0207667_108584141 174
125 3300025981 Ga0207640_10755458 Ga0207640_107554582 174
126 3300026078 Ga0207702_10004077 Ga0207702_100040776 174
127 3300026116 Ga0207674_10746497 Ga0207674_107464971 174
128 3300026142 Ga0207698_10280656 Ga0207698_102806562 174
129 3300026142 Ga0207698_10552677 Ga0207698_105526772 174
130 3300031995 Ga0307409_100860314 Ga0307409_1008603142 174
131 3300045976 Ga0466967_1197380 Ga0466967_1197380_143_670 174
132 3300000532 CNAas_1008601 CNAas_10086011 175
133 3300005366 Ga0070659_100409887 Ga0070659_1004098871 175
134 3300005438 Ga0070701_10129932 Ga0070701_101299322 175
135 3300005468 Ga0070707_101152343 Ga0070707_1011523431 175
136 3300005544 Ga0070686_100179646 Ga0070686_1001796462 175
137 3300005843 Ga0068860_100983779 Ga0068860_1009837791 175
138 3300006844 Ga0075428_100185057 Ga0075428_1001850572 175
139 3300006871 Ga0075434_100358452 Ga0075434_1003584522 175
140 3300006880 Ga0075429_100285118 Ga0075429_1002851182 175
141 3300009147 Ga0114129_10043223 Ga0114129_100432233 175
142 3300010375 Ga0105239_10250484 Ga0105239_102504843 175
143 3300011119 Ga0105246_10229545 Ga0105246_102295452 175
144 3300013306 Ga0163162_10830737 Ga0163162_108307372 175
145 3300014326 Ga0157380_11479427 Ga0157380_114794271 175
146 3300032002 Ga0307416_101537227 Ga0307416_1015372271 175
147 3300037466 Ga0395898_1240941 Ga0395898_1240941_91_624 175
148 3300044658 Ga0466972_0134750 Ga0466972_0134750_271_807 175
149 3300044706 Ga0466964_0155828 Ga0466964_0155828_336_872 175
150 3300044842 Ga0466957_0283395 Ga0466957_0283395_450_1013 175
151 3300044901 Ga0466960_0005431 Ga0466960_0005431_1528_2064 175
152 3300045049 Ga0466959_0065699 Ga0466959_0065699_501_1064 175
153 3300045836 Ga0466958_0020253 Ga0466958_0020253_1644_2207 175
154 3300050507 nmdc:mga05p37_33522_c1 nmdc:mga05p37_33522_c1_1526_2053 175
155 3300050508 nmdc:mga09592_390971_c1 nmdc:mga09592_390971_c1_627_1154 175

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04239

DUF421

YetF C-terminal domain

102

185

0.93

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pLDDT pTM Quality
54.16 0.37 Low
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Predicted Structure (AlphaFold2)

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