F220626

General Info

Members Datasets Scaffolds Average Seq Length
154 103 132 587

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0034059|Ga0501032_0034059_403_2271
Length 622
Sequence VLPTGRVTADLLPLAVAIPLLGAAVLVLAGRLLPRTGVDALATAFAAGTAAEIAVLWARVGDEGGRAVSWVGGWTPRGGHSVGIVLVADRLGAGLALLVAVLVAAVLVYSWRYFDEPPDRHRGSFPALLLLFEAGMCGFALTGDLFDAFVFFELMGVVAYALTGFRIEDPRPLHGALTFGVVNSLAAYCSLLGIGLLYARTGELGMAQIGAALAGHRADTLTVTAFVLVMAGLLVKAAIVPFHFWLPDAHAVAPTPVCMLMSGVMVELGLYGAARIQLTVFGGPGGIPHEAVTRTFGVLGAATALTGAVMCWQQRHLKRMLAFSTIAHTGLWLLGLGLQGPDATAGTALYVAGHAGVKAALFGLTGVLLDRHGSVDEHGLYGTERGSPCTGALFLTGAVALAGLPPFGTGLGKAVAEHAAGEHLAWLPALYVLVSALTGGAVLRAGLRIFHGAGPEPRPSHSDVETSGSGEEPEVRDPRRAVPRTMTAVPAALLLGALALGLWPAAARAVASAATSFADRAGYLAQVRASAAALPLATAPPAQWTASGVLLGLLSVAAAGALALVAVRPPAGALRPLRALARAADRRLVVPLRRLHSGRISDYVTWLTVGLACMLLALSAQM

Samples

Sample ID Description Type Environment
1 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
2 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
3 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
4 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
5 2867475112 Streptomyces sp. TM32 Isolate Unclassified
6 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
7 2902330777 Methylobacterium sp. 2A Isolate Unclassified
8 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
9 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
10 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
11 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
12 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
13 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
14 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
15 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
38 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
39 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
40 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
41 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
42 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
47 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
48 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
49 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
50 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
55 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
56 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
59 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
60 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
61 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
79 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
80 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
81 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
82 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
83 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
84 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
87 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
95 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
96 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
97 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
98 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
99 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
100 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
101 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
102 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
103 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.06
Metatranscriptomes 0.65
Isolates 14.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.65
Nodule 0
Rhizoplane 2.6
Rhizosphere 88.31
Stem 0
Stem Tuber 0
Unclassified 8.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10078644 3300003323 Bacteria 6636
2 JGI25407J50210_10001880 3300003373 Bacteria 4865
3 Ga0070658_10002828 3300005327 Bacteria 14421
4 Ga0070680_100000662 3300005336 Bacteria 23877
5 Ga0070680_100036255 3300005336 Bacteria 3984
6 Ga0070681_10003390 3300005458 Bacteria 14911
7 Ga0070681_10009714 3300005458 Bacteria 9468
8 Ga0070681_10101911 3300005458 Bacteria 2816
9 Ga0070679_100059461 3300005530 Bacteria 3809
10 Ga0070679_100074342 3300005530 Bacteria 3389
11 Ga0070679_100081511 3300005530 Bacteria 3225
12 Ga0068853_100039554 3300005539 Unclassified 4023
13 Ga0081538_10000869 3300005981 Bacteria 32613
14 Ga0081539_10063719 3300005985 Bacteria 2010
15 Ga0075433_10011903 3300006852 Bacteria 7010
16 Ga0075433_10030486 3300006852 Bacteria 4602
17 Ga0105240_10008416 3300009093 Bacteria 14760
18 Ga0105240_10040060 3300009093 Bacteria 5996
19 Ga0105240_10139464 3300009093 Bacteria 2900
20 Ga0114129_10010964 3300009147 Bacteria 12911
21 Ga0114129_10230282 3300009147 Bacteria 2496
22 Ga0157370_10015018 3300013104 Bacteria 7894
23 Ga0157370_10059070 3300013104 Bacteria 3645
24 Ga0157372_10270444 3300013307 Bacteria 1975
25 Ga0206353_10619366 3300020082 Bacteria 20786
26 Ga0207426_1003249 3300025302 Bacteria 9109
27 Ga0207705_10002404 3300025909 Bacteria 14457
28 Ga0207707_10001409 3300025912 Bacteria 22271
29 Ga0207695_10000147 3300025913 Bacteria 208929
30 Ga0207660_10013438 3300025917 Bacteria 5365
31 Ga0207660_10054519 3300025917 Bacteria 2854
32 Ga0207652_10001098 3300025921 Bacteria 24477
33 Ga0207652_10013197 3300025921 Bacteria 6691
34 Ga0307518_10078348 3300031838 Bacteria 2387
35 Ga0307414_10076690 3300032004 Bacteria 2430
36 Ga0373925_0108672 3300037068 Bacteria 2140
37 Ga0395899_0003779 3300037312 Bacteria 11950
38 Ga0395899_0010627 3300037312 Bacteria 7053
39 Ga0395900_0003397 3300037418 Bacteria 17195
40 Ga0395900_0016339 3300037418 Bacteria 7566
41 Ga0395900_0019506 3300037418 Bacteria 6913
42 Ga0395900_0045786 3300037418 Bacteria 4506
43 Ga0395898_0014637 3300037466 Bacteria 8056
44 Ga0395898_0018460 3300037466 Bacteria 7112
45 Ga0395898_0019333 3300037466 Bacteria 6935
46 Ga0395898_0031445 3300037466 Bacteria 5303
47 Ga0395898_0074687 3300037466 Bacteria 3275
48 Ga0395905_0002708 3300037471 Bacteria 19412
49 Ga0395905_0043603 3300037471 Bacteria 4208
50 Ga0395901_0000956 3300038443 Bacteria 31448
51 Ga0395901_0002275 3300038443 Bacteria 19595
52 Ga0395901_0005804 3300038443 Bacteria 12505
53 Ga0395901_0058929 3300038443 Bacteria 3994
54 Ga0395901_0125060 3300038443 Bacteria 2702
55 Ga0451853_0351496 3300041512 Bacteria 4468
56 Ga0451577_0015144 3300042876 Bacteria 7176
57 Ga0466966_0010859 3300044684 Bacteria 6049
58 Ga0466966_0084375 3300044684 Bacteria 1976
59 Ga0466961_0001907 3300044693 Bacteria 12998
60 Ga0466963_0014574 3300044694 Bacteria 4851
61 Ga0466963_0017969 3300044694 Bacteria 4412
62 Ga0466964_0000253 3300044706 Bacteria 15446
63 Ga0466971_0013413 3300044719 Bacteria 3600
64 Ga0466971_0016734 3300044719 Bacteria 3239
65 Ga0466971_0032265 3300044719 Bacteria 2347
66 Ga0466970_0025129 3300044765 Bacteria 3118
67 Ga0451576_0048919 3300045051 Bacteria 4438
68 Ga0466958_0000973 3300045836 Bacteria 12928
69 Ga0466967_0022732 3300045976 Bacteria 5124
70 Ga0466967_0026141 3300045976 Bacteria 4829
71 Ga0466967_0049663 3300045976 Bacteria 3670
72 Ga0466967_0063549 3300045976 Bacteria 3280
73 Ga0495603_0000994 3300046455 Bacteria 16355
74 Ga0495629_0000422 3300046459 Bacteria 35322
75 Ga0495613_0001184 3300046689 Bacteria 19923
76 Ga0495676_0006613 3300047321 Bacteria 10688
77 Ga0495614_0000720 3300048089 Bacteria 13973
78 Ga0496110_0005716 3300048913 Bacteria 9768
79 Ga0496111_0006969 3300048914 Bacteria 7378
80 Ga0496113_0078666 3300048916 Bacteria 2523
81 Ga0501031_0000796 3300049568 Bacteria 18971
82 Ga0501032_0001044 3300049569 Bacteria 22225
83 Ga0501032_0034059 3300049569 Bacteria 3488
84 Ga0501033_0001831 3300049570 Bacteria 18525
85 Ga0501033_0006987 3300049570 Bacteria 8813
86 Ga0501034_0054978 3300049571 Bacteria 4006
87 Ga0501034_0246062 3300049571 Bacteria 1733
88 Ga0501036_0001498 3300049572 Bacteria 18007
89 Ga0501036_0030824 3300049572 Bacteria 4531
90 Ga0501037_0000344 3300049573 Bacteria 39209
91 Ga0501037_0000693 3300049573 Bacteria 25670
92 Ga0501037_0021363 3300049573 Bacteria 4781
93 Ga0501038_0000195 3300049574 Bacteria 52526
94 Ga0501038_0000223 3300049574 Bacteria 48354
95 Ga0501039_0051626 3300049575 Bacteria 3181
96 Ga0501040_0002221 3300049576 Bacteria 12497
97 Ga0501041_0006855 3300049577 Bacteria 6675
98 Ga0501043_0002372 3300049579 Bacteria 15938
99 Ga0501043_0032264 3300049579 Bacteria 4117
100 Ga0501046_0000436 3300049580 Bacteria 41914
101 Ga0501046_0023617 3300049580 Bacteria 5053
102 Ga0501047_0000116 3300049581 Bacteria 96774
103 Ga0501047_0000433 3300049581 Bacteria 46523
104 Ga0501047_0001151 3300049581 Bacteria 26235
105 Ga0501047_0221872 3300049581 Bacteria 1746
106 Ga0501048_0013424 3300049582 Bacteria 6079
107 Ga0501067_0000366 3300049583 Bacteria 24727
108 Ga0501068_0002536 3300049584 Bacteria 9694
109 Ga0501069_0001205 3300049585 Bacteria 12600
110 Ga0501069_0016627 3300049585 Bacteria 3953
111 Ga0501070_0000104 3300049586 Bacteria 74572
112 Ga0501070_0001624 3300049586 Bacteria 19949
113 Ga0501070_0061229 3300049586 Bacteria 3119
114 Ga0501072_0007567 3300049588 Bacteria 8242
115 Ga0501073_0003188 3300049589 Bacteria 12303
116 Ga0501079_0004096 3300049741 Bacteria 10787
117 Ga0501080_0000080 3300049742 Bacteria 65358
118 Ga0501083_0004936 3300049744 Bacteria 9443
119 Ga0501035_0010988 3300049822 Bacteria 8382
120 Ga0501035_0026647 3300049822 Bacteria 5287
121 Ga0501035_0061469 3300049822 Bacteria 3342
122 Ga0501044_0003216 3300049823 Bacteria 18405
123 Ga0501044_0003831 3300049823 Bacteria 16880
124 Ga0501044_0093782 3300049823 Bacteria 3027
125 Ga0501045_0049826 3300049824 Bacteria 3054
126 nmdc:mga05p37_109089_c1 3300050507 Bacteria 3405
127 nmdc:mga0n895_15177_c1 3300050512 Bacteria 7018
128 nmdc:mga0a205_40743_c1 3300050515 Bacteria 4472
129 Ga0501084_0004874 3300054114 Bacteria 10959
130 Ga0501082_0002722 3300060353 Bacteria 15439
131 Ga0466962_0025186 3300061719 Bacteria 2856
132 Ga0530510_0033889 3300061734 Bacteria 3677

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0246062 Ga0501034_0246062_298_1719 384
2 3300049581 Ga0501047_0221872 Ga0501047_0221872_315_1736 384
3 3300044719 Ga0466971_0013413 Ga0466971_0013413_792_2609 431
4 3300061719 Ga0466962_0025186 Ga0466962_0025186_322_2139 431
5 3300044684 Ga0466966_0084375 Ga0466966_0084375_45_1643 437
6 3300038443 Ga0395901_0125060 Ga0395901_0125060_14_1675 439
7 3300032004 Ga0307414_10076690 Ga0307414_100766902 462
8 3300005981 Ga0081538_10000869 Ga0081538_1000086916 470
9 3300045976 Ga0466967_0022732 Ga0466967_0022732_2064_3881 470
10 3300044719 Ga0466971_0032265 Ga0466971_0032265_319_2136 472
11 3300045976 Ga0466967_0063549 Ga0466967_0063549_1234_3057 472
12 3300044765 Ga0466970_0025129 Ga0466970_0025129_1202_3028 473
13 3300003373 JGI25407J50210_10001880 JGI25407J50210_100018803 475
14 3300037418 Ga0395900_0045786 Ga0395900_0045786_915_2702 481
15 3300045976 Ga0466967_0049663 Ga0466967_0049663_1106_2860 481
16 3300037068 Ga0373925_0108672 Ga0373925_0108672_53_1891 486
17 3300049586 Ga0501070_0061229 Ga0501070_0061229_484_2346 486
18 3300006852 Ga0075433_10011903 Ga0075433_100119036 487
19 3300009147 Ga0114129_10010964 Ga0114129_1001096410 487
20 3300044694 Ga0466963_0014574 Ga0466963_0014574_298_2115 487
21 3300050507 nmdc:mga05p37_109089_c1 nmdc:mga05p37_109089_c1_726_2510 487
22 3300050512 nmdc:mga0n895_15177_c1 nmdc:mga0n895_15177_c1_3056_4840 487
23 3300050515 nmdc:mga0a205_40743_c1 nmdc:mga0a205_40743_c1_2554_4338 487
24 iso_pu_bacteria 2861691609 2861692608 487
25 iso_pu_bacteria 2902330777 2902336945 487
26 3300005336 Ga0070680_100036255 Ga0070680_1000362555 488
27 3300005458 Ga0070681_10009714 Ga0070681_100097146 488
28 3300005530 Ga0070679_100081511 Ga0070679_1000815112 488
29 3300009093 Ga0105240_10040060 Ga0105240_100400603 488
30 3300025917 Ga0207660_10013438 Ga0207660_100134388 488
31 3300025921 Ga0207652_10013197 Ga0207652_100131971 488
32 3300009093 Ga0105240_10008416 Ga0105240_1000841615 489
33 3300037418 Ga0395900_0003397 Ga0395900_0003397_15349_17136 489
34 3300037466 Ga0395898_0019333 Ga0395898_0019333_4425_6191 489
35 3300037466 Ga0395898_0074687 Ga0395898_0074687_58_1845 489
36 3300037471 Ga0395905_0002708 Ga0395905_0002708_17549_19336 489
37 3300037471 Ga0395905_0043603 Ga0395905_0043603_1997_3763 489
38 3300038443 Ga0395901_0002275 Ga0395901_0002275_1350_3137 489
39 3300038443 Ga0395901_0005804 Ga0395901_0005804_2108_3874 489
40 3300049589 Ga0501073_0003188 Ga0501073_0003188_6609_8438 490
41 3300049822 Ga0501035_0061469 Ga0501035_0061469_160_2019 490
42 iso_pu_bacteria 2595698237 2596371779 491
43 iso_pu_bacteria 2889306138 2889307086 491
44 iso_pu_bacteria 2902405164 2902411209 491
45 iso_pu_bacteria 2928125067 2928128041 491
46 3300041512 Ga0451853_0351496 Ga0451853_0351496_1381_3198 493
47 3300049568 Ga0501031_0000796 Ga0501031_0000796_259_2103 495
48 3300049569 Ga0501032_0001044 Ga0501032_0001044_10351_12195 495
49 3300049570 Ga0501033_0001831 Ga0501033_0001831_10129_11973 495
50 3300049572 Ga0501036_0001498 Ga0501036_0001498_4976_6820 495
51 3300049573 Ga0501037_0000344 Ga0501037_0000344_31555_33399 495
52 3300049574 Ga0501038_0000195 Ga0501038_0000195_16914_18758 495
53 3300049579 Ga0501043_0002372 Ga0501043_0002372_13764_15608 495
54 3300049580 Ga0501046_0000436 Ga0501046_0000436_26841_28685 495
55 3300049581 Ga0501047_0001151 Ga0501047_0001151_7581_9425 495
56 3300049582 Ga0501048_0013424 Ga0501048_0013424_1396_3240 495
57 3300049585 Ga0501069_0001205 Ga0501069_0001205_4274_6118 495
58 3300049586 Ga0501070_0001624 Ga0501070_0001624_16759_18603 495
59 3300049742 Ga0501080_0000080 Ga0501080_0000080_53212_55056 495
60 3300049744 Ga0501083_0004936 Ga0501083_0004936_661_2505 495
61 3300049822 Ga0501035_0026647 Ga0501035_0026647_331_2175 495
62 3300049823 Ga0501044_0003216 Ga0501044_0003216_5893_7737 495
63 3300054114 Ga0501084_0004874 Ga0501084_0004874_5193_7037 495
64 3300042876 Ga0451577_0015144 Ga0451577_0015144_1438_3219 496
65 3300045051 Ga0451576_0048919 Ga0451576_0048919_476_2257 496
66 3300046455 Ga0495603_0000994 Ga0495603_0000994_10873_12675 496
67 3300046459 Ga0495629_0000422 Ga0495629_0000422_3051_4853 496
68 3300046689 Ga0495613_0001184 Ga0495613_0001184_3545_5347 496
69 3300047321 Ga0495676_0006613 Ga0495676_0006613_3153_4955 496
70 3300048089 Ga0495614_0000720 Ga0495614_0000720_9706_11508 496
71 3300005327 Ga0070658_10002828 Ga0070658_100028283 497
72 3300005336 Ga0070680_100000662 Ga0070680_10000066213 497
73 3300005458 Ga0070681_10003390 Ga0070681_100033902 497
74 3300005530 Ga0070679_100059461 Ga0070679_1000594614 497
75 3300020082 Ga0206353_10619366 Ga0206353_1061936616 497
76 3300025909 Ga0207705_10002404 Ga0207705_100024042 497
77 3300025912 Ga0207707_10001409 Ga0207707_1000140913 497
78 3300025921 Ga0207652_10001098 Ga0207652_1000109815 497
79 3300049585 Ga0501069_0016627 Ga0501069_0016627_190_2007 498
80 3300005530 Ga0070679_100074342 Ga0070679_1000743422 499
81 3300037466 Ga0395898_0018460 Ga0395898_0018460_1586_3373 499
82 3300048913 Ga0496110_0005716 Ga0496110_0005716_2593_4431 499
83 3300048914 Ga0496111_0006969 Ga0496111_0006969_4622_6460 499
84 3300048916 Ga0496113_0078666 Ga0496113_0078666_568_2406 499
85 3300037312 Ga0395899_0010627 Ga0395899_0010627_5000_6820 501
86 3300037418 Ga0395900_0016339 Ga0395900_0016339_1668_3488 501
87 3300037466 Ga0395898_0014637 Ga0395898_0014637_3208_5028 501
88 3300038443 Ga0395901_0058929 Ga0395901_0058929_32_1852 501
89 3300006852 Ga0075433_10030486 Ga0075433_100304868 502
90 3300009147 Ga0114129_10230282 Ga0114129_102302823 502
91 3300037418 Ga0395900_0019506 Ga0395900_0019506_3556_5379 502
92 3300037466 Ga0395898_0031445 Ga0395898_0031445_2709_4532 502
93 3300038443 Ga0395901_0000956 Ga0395901_0000956_19178_21001 502
94 3300049573 Ga0501037_0021363 Ga0501037_0021363_1804_3618 502
95 3300049581 Ga0501047_0000116 Ga0501047_0000116_40748_42562 502
96 3300049823 Ga0501044_0093782 Ga0501044_0093782_698_2512 502
97 iso_pu_bacteria 8053945823 8053949266 503
98 iso_pu_bacteria 2751185782 2753266032 504
99 3300044694 Ga0466963_0017969 Ga0466963_0017969_1015_2838 505
100 iso_pu_bacteria 8056447290 8056451233 508
101 3300005458 Ga0070681_10101911 Ga0070681_101019113 509
102 3300025917 Ga0207660_10054519 Ga0207660_100545193 509
103 3300025302 Ga0207426_1003249 Ga0207426_10032493 510
104 iso_pu_bacteria 2791355406 2793982407 510
105 iso_pu_bacteria 8047893842 8047894757 510
106 iso_pu_bacteria 8048356638 8048364292 510
107 iso_pu_bacteria 8048369669 8048371777 510
108 iso_pu_bacteria 8048379754 8048380710 510
109 3300005539 Ga0068853_100039554 Ga0068853_1000395543 512
110 3300031838 Ga0307518_10078348 Ga0307518_100783482 512
111 3300037312 Ga0395899_0003779 Ga0395899_0003779_8642_10423 512
112 3300044684 Ga0466966_0010859 Ga0466966_0010859_394_2223 512
113 3300044693 Ga0466961_0001907 Ga0466961_0001907_7547_9376 512
114 3300044719 Ga0466971_0016734 Ga0466971_0016734_776_2605 512
115 3300049586 Ga0501070_0000104 Ga0501070_0000104_34507_36306 512
116 iso_pu_bacteria 2917736166 2917744485 512
117 iso_pu_bacteria 2997600082 2997601314 512
118 iso_pu_bacteria 2867475112 2867476707 513
119 iso_pu_bacteria 8054160619 8054165510 513
120 3300044706 Ga0466964_0000253 Ga0466964_0000253_10798_12615 515
121 3300045976 Ga0466967_0026141 Ga0466967_0026141_1856_3673 515
122 iso_pu_bacteria 2990088156 2990091980 515
123 iso_pu_bacteria 2997451912 2997453537 515
124 iso_pu_bacteria 2919051321 2919053663 517
125 3300009093 Ga0105240_10139464 Ga0105240_101394643 518
126 3300013104 Ga0157370_10015018 Ga0157370_100150184 518
127 3300013104 Ga0157370_10059070 Ga0157370_100590704 518
128 3300013307 Ga0157372_10270444 Ga0157372_102704441 518
129 3300025913 Ga0207695_10000147 Ga0207695_1000014754 518
130 3300045836 Ga0466958_0000973 Ga0466958_0000973_5488_7320 518
131 3300049569 Ga0501032_0034059 Ga0501032_0034059_403_2271 519
132 3300049570 Ga0501033_0006987 Ga0501033_0006987_5862_7730 519
133 3300049571 Ga0501034_0054978 Ga0501034_0054978_1736_3604 519
134 3300049572 Ga0501036_0030824 Ga0501036_0030824_403_2271 519
135 3300049573 Ga0501037_0000693 Ga0501037_0000693_23400_25268 519
136 3300049574 Ga0501038_0000223 Ga0501038_0000223_41537_43405 519
137 3300049575 Ga0501039_0051626 Ga0501039_0051626_448_2316 519
138 3300049576 Ga0501040_0002221 Ga0501040_0002221_8695_10563 519
139 3300049577 Ga0501041_0006855 Ga0501041_0006855_1348_3216 519
140 3300049579 Ga0501043_0032264 Ga0501043_0032264_403_2271 519
141 3300049580 Ga0501046_0023617 Ga0501046_0023617_808_2676 519
142 3300049581 Ga0501047_0000433 Ga0501047_0000433_3120_4988 519
143 3300049583 Ga0501067_0000366 Ga0501067_0000366_9729_11597 519
144 3300049584 Ga0501068_0002536 Ga0501068_0002536_2550_4418 519
145 3300049588 Ga0501072_0007567 Ga0501072_0007567_1163_3031 519
146 3300049741 Ga0501079_0004096 Ga0501079_0004096_5675_7543 519
147 3300049822 Ga0501035_0010988 Ga0501035_0010988_403_2271 519
148 3300049823 Ga0501044_0003831 Ga0501044_0003831_14444_16312 519
149 3300049824 Ga0501045_0049826 Ga0501045_0049826_71_1939 519
150 3300060353 Ga0501082_0002722 Ga0501082_0002722_12864_14732 519
151 3300061734 Ga0530510_0033889 Ga0530510_0033889_1341_3149 519
152 iso_pu_bacteria 3006321560 3006323377 519
153 3300003323 rootH1_10078644 rootH1_100786448 520
154 3300005985 Ga0081539_10063719 Ga0081539_100637191 520

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00361

Proton_antipo_M

Proton-conducting membrane transporter

142

438

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qru-assembly1.cif.gz_D structure of bacillus pseudofirmus mrp antiporter complex, monomer 0.8737 1 490
7qru-assembly1.cif.gz_D structure of bacillus pseudofirmus mrp antiporter complex, monomer 0.8702 1 490
7aqq-assembly1.cif.gz_M cryo-em structure of arabidopsis thaliana complex-i (membrane core) 0.8642 5 258
6z16-assembly1.cif.gz_d structure of the mrp antiporter complex 0.8598 1 490
6z16-assembly1.cif.gz_d structure of the mrp antiporter complex 0.8564 1 490
ID Description Score Start End Superfamily
af_P0AEW1_127_216_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7544 278 368 1.10.287.3510
af_P0AEW1_127_216_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7401 278 368 1.10.287.3510
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7189 3 128 1.20.1070.10
af_P0CC63_1_145_1.10.287.3510 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.6917 2 124 1.10.287.3510
af_M1FQK6_1_136_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.652 3 128 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A535UTY2-F1-model_v4 NADH-quinone oxidoreductase subunit D 0.9499 142 310 GO:0005886
AF-X1KAY2-F1-model_v4 NADH:quinone oxidoreductase/Mrp antiporter membrane subunit domain-containing protein 0.9312 35 241 GO:0005886
AF-X1AM16-F1-model_v4 NADH:quinone oxidoreductase/Mrp antiporter transmembrane domain-containing protein 0.9285 4 263 GO:0005886
AF-A0A4Q3RW60-F1-model_v4 Na+/H+ antiporter subunit D 0.9222 2 357 GO:0005886
AF-A0A1U7LG83-F1-model_v4 NADH-ubiquinone oxidoreductase chain 2 (EC 7.1.1.2) (NADH dehydrogenase subunit 2) 0.9179 112 244 GO:0005739
GO:0016020

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pLDDT pTM Quality
86.05 0.9 High
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Predicted Structure (AlphaFold2)

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