F219399

General Info

Members Datasets Scaffolds Average Seq Length
154 59 308 301

Family's Representative Sequence

Representative Sequence 3300006880|Ga0075429_100000962|Ga0075429_1000009627
Length 328
Sequence MPTRSDLHFDEKTSQLADDMTTPPICDYEGSDYQTSFWDKGGRAYEDRTEAIALQRLLPEGGRLLLELGAGAGRNTPRYRGFDRIVLLDFSRTQLEQARQRLGKTDKYVYVAADVYRLPFVPGLFDAATMIRVLHHMADAPRALGQVKNVLSPNGVFILEYANKLNLKAILRYFLGRQKWSPFTLEPVEFAKLNFDFHPRAVRNWMENLGFHVEQTLTLSHFRVGLLKRIVPTGILVFLDSLLQWSGAWWQLSPSVFIKARSVEQDARLESSRRGSPLSNPGKVLSYFKCPDCGHSPLMDKTDHLQCSSCGKKWAVRDGIYDFREPMK

Samples

Sample ID Description Type Environment
1 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
29 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
30 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
31 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
32 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
33 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
34 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
35 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
36 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
37 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
38 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
41 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
44 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
45 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
46 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
47 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
51 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
52 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
53 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
54 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
55 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
56 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
57 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
58 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
59 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 18.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075429_100000962 3300006880 Bacteria 22853
2 SwRhRL2b_contig_807584 2162886007 Bacteria 4285
3 Ga0065704_10000385 3300005289 Bacteria 41151
4 Ga0065707_10000437 3300005295 Bacteria 81012
5 Ga0065707_10082714 3300005295 Bacteria 12549
6 Ga0070689_100237194 3300005340 Unclassified 1501
7 Ga0070705_100026560 3300005440 Bacteria 3153
8 Ga0070705_100288581 3300005440 Bacteria 1170
9 Ga0070694_100058627 3300005444 Bacteria 2620
10 Ga0070694_100067151 3300005444 Bacteria 2461
11 Ga0070694_100350008 3300005444 Unclassified 1144
12 Ga0070706_100014946 3300005467 Bacteria 7170
13 Ga0070706_100020027 3300005467 Bacteria 6166
14 Ga0070707_100123340 3300005468 Bacteria 2516
15 Ga0070698_100374091 3300005471 Unclassified 1357
16 Ga0070699_100001164 3300005518 Bacteria 24377
17 Ga0070699_100130571 3300005518 Bacteria 2214
18 Ga0070696_100121802 3300005546 Bacteria 1888
19 Ga0068858_100296064 3300005842 Bacteria 1543
20 Ga0068862_100003079 3300005844 Bacteria 14536
21 Ga0068862_100254724 3300005844 Unclassified 1600
22 Ga0081539_10000773 3300005985 Bacteria 62951
23 Ga0081539_10018509 3300005985 Unclassified 4829
24 Ga0075427_10002840 3300006194 Bacteria 2352
25 Ga0075428_100022602 3300006844 Bacteria 6963
26 Ga0075428_100199551 3300006844 Unclassified 2163
27 Ga0075430_100032329 3300006846 Bacteria 4441
28 Ga0075431_100131354 3300006847 Unclassified 2582
29 Ga0075429_100008156 3300006880 Bacteria 9106
30 Ga0075429_100052622 3300006880 Bacteria 3543
31 Ga0114129_10001524 3300009147 Bacteria 31382
32 Ga0114129_10003582 3300009147 Bacteria 21860
33 Ga0114129_10017274 3300009147 Bacteria 10275
34 Ga0114129_10099407 3300009147 Unclassified 4027
35 Ga0114129_10117757 3300009147 Unclassified 3659
36 Ga0105243_10036768 3300009148 Bacteria 3803
37 Ga0105243_10158332 3300009148 Bacteria 1950
38 Ga0105243_10329707 3300009148 Bacteria 1394
39 Ga0105246_10179750 3300011119 Unclassified 1628
40 Ga0207684_10221832 3300025910 Unclassified 1631
41 Ga0207646_10533261 3300025922 Unclassified 1056
42 Ga0207709_10230472 3300025935 Bacteria 1341
43 Ga0207670_10085325 3300025936 Bacteria 2219
44 Ga0207712_10128892 3300025961 Bacteria 1925
45 Ga0207712_10135759 3300025961 Unclassified 1881
46 Ga0265322_10012464 3300028654 Bacteria 2460
47 Ga0265336_10046213 3300028666 Unclassified 1323
48 Ga0265338_10013336 3300028800 Bacteria 9285
49 Ga0265340_10017149 3300031247 Bacteria 3745
50 Ga0265327_10005728 3300031251 Bacteria 10245
51 Ga0265316_10018246 3300031344 Bacteria 6034
52 Ga0316575_10063006 3300031665 Bacteria 1483
53 Ga0316579_10000970 3300031691 Bacteria 10038
54 Ga0316579_10005258 3300031691 Bacteria 5210
55 Ga0316579_10101939 3300031691 Bacteria 1375
56 Ga0316576_10101410 3300031727 Bacteria 2152
57 Ga0316576_10242104 3300031727 Unclassified 1355
58 Ga0316578_10034709 3300031728 Bacteria 2897
59 Ga0316578_10056278 3300031728 Bacteria 2310
60 Ga0316577_10001291 3300031733 Bacteria 11692
61 Ga0316577_10006693 3300031733 Bacteria 6109
62 Ga0316577_10014769 3300031733 Unclassified 4291
63 Ga0316577_10024117 3300031733 Bacteria 3381
64 Ga0316577_10263683 3300031733 Unclassified 975
65 Ga0307409_100078827 3300031995 Bacteria 2652
66 Ga0316585_10003188 3300032137 Bacteria 4481
67 Ga0316585_10005985 3300032137 Bacteria 3458
68 Ga0373923_0152027 3300035111 Bacteria 1052
69 Ga0316574_0000443 3300035398 Bacteria 16514
70 Ga0316574_0005074 3300035398 Bacteria 6994
71 Ga0316574_0043818 3300035398 Bacteria 2766
72 Ga0316582_0000340 3300036647 Bacteria 16513
73 Ga0316582_0000471 3300036647 Bacteria 15004
74 Ga0316582_0030802 3300036647 Unclassified 3272
75 Ga0316582_0052429 3300036647 Bacteria 2593
76 Ga0316582_0063776 3300036647 Bacteria 2368
77 Ga0316582_0117369 3300036647 Unclassified 1778
78 Ga0316582_0156786 3300036647 Bacteria 1541
79 Ga0316584_0001744 3300036712 Bacteria 13358
80 Ga0316584_0001891 3300036712 Bacteria 13009
81 Ga0316584_0019344 3300036712 Unclassified 4922
82 Ga0316584_0040337 3300036712 Bacteria 3478
83 Ga0316584_0293604 3300036712 Bacteria 1179
84 Ga0316581_0000872 3300037588 Bacteria 6362
85 Ga0451577_0000980 3300042876 Bacteria 41601
86 Ga0451577_0002445 3300042876 Bacteria 22138
87 Ga0451577_0021046 3300042876 Bacteria 5976
88 Ga0451577_0079391 3300042876 Bacteria 2925
89 Ga0451577_0171856 3300042876 Bacteria 1953
90 Ga0451577_0198069 3300042876 Bacteria 1813
91 Ga0451577_0350507 3300042876 Bacteria 1339
92 Ga0451577_0355041 3300042876 Bacteria 1330
93 Ga0451577_0403757 3300042876 Bacteria 1240
94 Ga0453683_0018942 3300044673 Bacteria 4415
95 Ga0453683_0020964 3300044673 Bacteria 4174
96 Ga0453683_0021060 3300044673 Bacteria 4163
97 Ga0453683_0031617 3300044673 Unclassified 3343
98 Ga0453683_0034898 3300044673 Bacteria 3170
99 Ga0453683_0051864 3300044673 Bacteria 2569
100 Ga0453683_0087013 3300044673 Bacteria 1958
101 Ga0453683_0096138 3300044673 Bacteria 1858
102 Ga0453683_0120868 3300044673 Unclassified 1649
103 Ga0453683_0288715 3300044673 Unclassified 1048
104 Ga0453684_0000035 3300044712 Bacteria 725956
105 Ga0453684_0000128 3300044712 Bacteria 335864
106 Ga0453684_0000269 3300044712 Bacteria 223826
107 Ga0453684_0001055 3300044712 Bacteria 87724
108 Ga0453684_0002283 3300044712 Bacteria 47233
109 Ga0453684_0007770 3300044712 Bacteria 19567
110 Ga0453684_0008003 3300044712 Bacteria 19140
111 Ga0453684_0015237 3300044712 Bacteria 12192
112 Ga0453684_0015542 3300044712 Bacteria 12023
113 Ga0453684_0035912 3300044712 Bacteria 6839
114 Ga0453684_0045173 3300044712 Bacteria 5880
115 Ga0453684_0057333 3300044712 Bacteria 5042
116 Ga0453684_0060569 3300044712 Bacteria 4866
117 Ga0453684_0105770 3300044712 Bacteria 3431
118 Ga0453684_0138971 3300044712 Bacteria 2904
119 Ga0453684_0145158 3300044712 Bacteria 2828
120 Ga0453684_0157760 3300044712 Bacteria 2688
121 Ga0453684_0211326 3300044712 Bacteria 2255
122 Ga0453684_0233334 3300044712 Bacteria 2123
123 Ga0453684_0242560 3300044712 Bacteria 2074
124 Ga0453684_0257298 3300044712 Unclassified 2002
125 Ga0453684_0362973 3300044712 Unclassified 1630
126 Ga0453684_0627671 3300044712 Unclassified 1175
127 Ga0453684_0892162 3300044712 Bacteria 953
128 Ga0451576_0000115 3300045051 Bacteria 208342
129 Ga0451576_0020365 3300045051 Bacteria 7225
130 Ga0451576_0081430 3300045051 Bacteria 3367
131 Ga0451576_0138273 3300045051 Bacteria 2540
132 Ga0451576_0165642 3300045051 Bacteria 2307
133 Ga0451576_0348940 3300045051 Bacteria 1549
134 Ga0451576_0781874 3300045051 Bacteria 1002
135 Ga0501071_0059129 3300049587 Bacteria 2773
136 Ga0501074_0216537 3300049590 Bacteria 1364
137 Ga0501076_0071146 3300049592 Bacteria 2782
138 Ga0501081_0334244 3300049743 Bacteria 1115
139 nmdc:mga05p37_110285_c1 3300050507 Unclassified 3385
140 nmdc:mga05p37_2257_c1 3300050507 Bacteria 22446
141 nmdc:mga05p37_42903_c1 3300050507 Bacteria 5560
142 nmdc:mga05p37_663992_c1 3300050507 Bacteria 1165
143 nmdc:mga05p37_7242_c1 3300050507 Bacteria 13087
144 nmdc:mga05p37_79913_c1 3300050507 Unclassified 4027
145 nmdc:mga09592_12827_c1 3300050508 Bacteria 6834
146 nmdc:mga09592_263991_c1 3300050508 Unclassified 1493
147 nmdc:mga09592_42871_c1 3300050508 Bacteria 3807
148 nmdc:mga09592_59952_c1 3300050508 Bacteria 3217
149 nmdc:mga09592_7772_c1 3300050508 Bacteria 8711
150 nmdc:mga0n895_146475_c1 3300050512 Bacteria 2391
151 nmdc:mga0a205_23367_c1 3300050515 Bacteria 5864
152 Ga0501084_0000823 3300054114 Bacteria 23861
153 Ga0501084_0573307 3300054114 Bacteria 954
154 Ga0530510_0232765 3300061734 Bacteria 1371
155 Ga0075429_100000962
156 SwRhRL2b_contig_807584
157 Ga0065704_10000385
158 Ga0065707_10000437
159 Ga0065707_10082714
160 Ga0070689_100237194
161 Ga0070705_100026560
162 Ga0070705_100288581
163 Ga0070694_100058627
164 Ga0070694_100067151
165 Ga0070694_100350008
166 Ga0070706_100014946
167 Ga0070706_100020027
168 Ga0070707_100123340
169 Ga0070698_100374091
170 Ga0070699_100001164
171 Ga0070699_100130571
172 Ga0070696_100121802
173 Ga0068858_100296064
174 Ga0068862_100003079
175 Ga0068862_100254724
176 Ga0081539_10000773
177 Ga0081539_10018509
178 Ga0075427_10002840
179 Ga0075428_100022602
180 Ga0075428_100199551
181 Ga0075430_100032329
182 Ga0075431_100131354
183 Ga0075429_100008156
184 Ga0075429_100052622
185 Ga0114129_10001524
186 Ga0114129_10003582
187 Ga0114129_10017274
188 Ga0114129_10099407
189 Ga0114129_10117757
190 Ga0105243_10036768
191 Ga0105243_10158332
192 Ga0105243_10329707
193 Ga0105246_10179750
194 Ga0207684_10221832
195 Ga0207646_10533261
196 Ga0207709_10230472
197 Ga0207670_10085325
198 Ga0207712_10128892
199 Ga0207712_10135759
200 Ga0265322_10012464
201 Ga0265336_10046213
202 Ga0265338_10013336
203 Ga0265340_10017149
204 Ga0265327_10005728
205 Ga0265316_10018246
206 Ga0316575_10063006
207 Ga0316579_10000970
208 Ga0316579_10005258
209 Ga0316579_10101939
210 Ga0316576_10101410
211 Ga0316576_10242104
212 Ga0316578_10034709
213 Ga0316578_10056278
214 Ga0316577_10001291
215 Ga0316577_10006693
216 Ga0316577_10014769
217 Ga0316577_10024117
218 Ga0316577_10263683
219 Ga0307409_100078827
220 Ga0316585_10003188
221 Ga0316585_10005985
222 Ga0373923_0152027
223 Ga0316574_0000443
224 Ga0316574_0005074
225 Ga0316574_0043818
226 Ga0316582_0000340
227 Ga0316582_0000471
228 Ga0316582_0030802
229 Ga0316582_0052429
230 Ga0316582_0063776
231 Ga0316582_0117369
232 Ga0316582_0156786
233 Ga0316584_0001744
234 Ga0316584_0001891
235 Ga0316584_0019344
236 Ga0316584_0040337
237 Ga0316584_0293604
238 Ga0316581_0000872
239 Ga0451577_0000980
240 Ga0451577_0002445
241 Ga0451577_0021046
242 Ga0451577_0079391
243 Ga0451577_0171856
244 Ga0451577_0198069
245 Ga0451577_0350507
246 Ga0451577_0355041
247 Ga0451577_0403757
248 Ga0453683_0018942
249 Ga0453683_0020964
250 Ga0453683_0021060
251 Ga0453683_0031617
252 Ga0453683_0034898
253 Ga0453683_0051864
254 Ga0453683_0087013
255 Ga0453683_0096138
256 Ga0453683_0120868
257 Ga0453683_0288715
258 Ga0453684_0000035
259 Ga0453684_0000128
260 Ga0453684_0000269
261 Ga0453684_0001055
262 Ga0453684_0002283
263 Ga0453684_0007770
264 Ga0453684_0008003
265 Ga0453684_0015237
266 Ga0453684_0015542
267 Ga0453684_0035912
268 Ga0453684_0045173
269 Ga0453684_0057333
270 Ga0453684_0060569
271 Ga0453684_0105770
272 Ga0453684_0138971
273 Ga0453684_0145158
274 Ga0453684_0157760
275 Ga0453684_0211326
276 Ga0453684_0233334
277 Ga0453684_0242560
278 Ga0453684_0257298
279 Ga0453684_0362973
280 Ga0453684_0627671
281 Ga0453684_0892162
282 Ga0451576_0000115
283 Ga0451576_0020365
284 Ga0451576_0081430
285 Ga0451576_0138273
286 Ga0451576_0165642
287 Ga0451576_0348940
288 Ga0451576_0781874
289 Ga0501071_0059129
290 Ga0501074_0216537
291 Ga0501076_0071146
292 Ga0501081_0334244
293 nmdc:mga05p37_110285_c1
294 nmdc:mga05p37_2257_c1
295 nmdc:mga05p37_42903_c1
296 nmdc:mga05p37_663992_c1
297 nmdc:mga05p37_7242_c1
298 nmdc:mga05p37_79913_c1
299 nmdc:mga09592_12827_c1
300 nmdc:mga09592_263991_c1
301 nmdc:mga09592_42871_c1
302 nmdc:mga09592_59952_c1
303 nmdc:mga09592_7772_c1
304 nmdc:mga0n895_146475_c1
305 nmdc:mga0a205_23367_c1
306 Ga0501084_0000823
307 Ga0501084_0573307
308 Ga0530510_0232765

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

66

159

0.97

PF13649

Methyltransf_25

Methyltransferase domain

65

155

0.94

PF13847

Methyltransf_31

Methyltransferase domain

59

208

0.9

PF08242

Methyltransf_12

Methyltransferase domain

66

157

0.9

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

51

183

0.85

PF13489

Methyltransf_23

Methyltransferase domain

38

216

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2p7h-assembly1.cif.gz_A crystal structure of a sam dependent methyl-transferase type 12 family protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.85 a resolution 0.7618 23 263
2p7h-assembly1.cif.gz_A crystal structure of a sam dependent methyl-transferase type 12 family protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.85 a resolution 0.756 23 263
3ofj-assembly1.cif.gz_A crystal structure of n-methyltransferase nods from bradyrhizobium japonicum wm9 0.7547 20 259
1vlm-assembly1.cif.gz_A crystal structure of sam-dependent methyltransferase, possible histamine n-methyltransferase (tm1293) from thermotoga maritima at 2.20 a resolution 0.7523 17 259
5ufm-assembly1.cif.gz_A crystal structure of burkholderia thailandensis 1,6-didemethyltoxoflavin-n1-methyltransferase with bound 1,6-didemethyltoxoflavin and s-adenosylhomocysteine 0.7512 13 259
ID Description Score Start End Superfamily
af_Q9GZF8_8_143_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8007 15 154 3.40.50.150
af_A8MQH8_165_275_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7968 117 267 3.40.50.150
af_A0A1D6NEM6_1_118_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.789 81 154 3.40.50.150
af_Q58523_1_205_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7751 13 257 3.40.50.150
2p7iA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7749 23 257 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A524IZE3-F1-model_v4 Class I SAM-dependent methyltransferase 0.9618 2 309 GO:0008757
GO:0032259
AF-A0A0K8PAE5-F1-model_v4 Protein containing methyltransferase domain 0.9596 1 310 GO:0008757
GO:0032259
AF-A0A540VMN5-F1-model_v4 Methyltransferase domain-containing protein 0.9488 1 312 GO:0008757
GO:0032259
AF-A0A0K8PAE5-F1-model_v4 Protein containing methyltransferase domain 0.9439 1 310 GO:0008757
GO:0032259
AF-A0A524IZE3-F1-model_v4 Class I SAM-dependent methyltransferase 0.9428 2 309 GO:0008757
GO:0032259

Map